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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
211

The role of perforin and chemokines in the pathogenesis of chronic corneal inflammation induced by herpes simplex virus type-1 infection

Chang, Eddie, January 2003 (has links)
Thesis (Ph. D.)--University of Missouri--Columbia, 2003. / Typescript. Vita. Includes bibliographical references (leaves 139-154).
212

La protéine majeure de la capside de l’HSV-1 est ubiquitinée

Raymond, Pascal 12 1900 (has links)
Le virus de l’Herpès simplex de type 1 (HSV-1) est le pathogène humain responsable des lésions herpétiques labiales, plus communément appelé « feux sauvages ». Annuellement, il est responsable de plusieurs cas d’encéphalites et d’infections de l’appareil visuel qui sont la principale cause de cécité en Amérique du Nord. Bien qu’il existe quelques traitements antiviraux, aucun vaccin ou médicament ne permet de prévenir ou de guérir les infections causées par ce virus. Aujourd’hui, les infections produites par l’HSV-1 sont présentes partout sur la planète. Récemment, une étude en protéomique effectuée sur les virus matures extracellulaires a permis d’identifier la présence d’ubiquitines libres et d’enzymes reliées à la machinerie d’ubiquitination dans le virus. De plus, le virus exploite cette machinerie au cours de l’infection. Il est connu que certaines protéines virales sont ubiquitinées durant une infection et que le virus imite même certaines enzymes d’ubiquitination. Nous avons donc entrepris des recherches afin d’identifier des protéines virales ubiquitinées qui pourraient être présentes dans les virus matures ainsi que leurs rôles potentiels. La protéine majeure de la capside, VP5, un constituant très important du virus, a été identifiée. Nos recherches nous ont permis de caractériser le type d’ubiquitination, une monoubiquitination sur les lysines K810 et/ou K1275 de VP5. Le rôle que pourrait jouer l’ubiquitination de VP5 dans le cycle de réplication virale et dans les virus matures n’est toutefois pas encore connu. / Herpes simplex virus type 1 (HSV-1) is the human pathogen responsible for herpetic lesion such as cold sores. On a yearly basis, it is responsible for many cases of encephalitis and infections of the eye that are the most common cause of blindness in North America. Antiviral treatments exist, but no vaccines or drugs are able to prevent or cure the diseases caused by this virus. Today, infections caused by HSV-1 are present all around the world. Recently a proteomics approach was used to study mature extracellular viruses. This study highlighted the presence in the virus of free ubiquitin and ubiquitin related enzymes. Furthermore, the virus exploits this machinery during the course of infection. Also, it is known that certain virally encoded proteins are ubiquitinated and that the virus mimics some ubiquitin related enzymes. Our researches focused on identifying ubiquitinated viral proteins that could be present in mature extracellular viruses and their potential roles. The major capsid protein, VP5, an important virus component, was identified. We characterised the type of ubiquitination, a monoubiquitination of lysine K810 and/or K1275 of VP5. The role that could play the ubiquitination of VP5 in the viral cell cycle and in mature virions has yet to be identified.
213

Analyse des protéines cellulaires incorporées dans les particules matures du virus de l’Herpès simplex de type 1

Stegen, Camille 04 1900 (has links)
Les virus exploitent la machinerie cellulaire de l’hôte de façon très variée et plusieurs types vont même jusqu’à incorporer certaines protéines cellulaires. Nous avons récemment effectué la première analyse protéomique du virion mature de l’Herpès simplex de type 1 (HSV-1), ce qui nous a permis de déterminer que jusqu’à 49 protéines cellulaires différentes se retrouvaient dans ce virus (Loret, S. et al. (2008). "Comprehensive characterization of extracellular herpes simplex virus type 1 virions." J Virol 82(17): 8605-18.). Afin de déterminer leur importance dans le cycle de réplication d’HSV-1, nous avons mis au point un système de criblage nous permettant de quantifier le virus produit et relâché dans le milieu extracellulaire en utilisant un virus marqué à la GFP ainsi que des petits ARN interférents (pARNi) ciblant spécifiquement ces protéines cellulaires. Cette approche nous a permis de démontrer que 17 des protéines identifiées précédemment jouaient un rôle critique dans la réplication d’HSV-1, suggérant ainsi que leur incorporation dans le virus n’est pas aléatoire. Nous avons ensuite examiné le rôle d’une de ces protéines, DDX3X (DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked), une protéine multifonctionnelle connue pour son implication dans les cycles de réplication de plusieurs virus humains. À l’aide de pARNi ainsi que de différentes lignées cellulaires, dont une lignée DDX3X thermosensible, nous avons démontré que l’inhibition de DDX3X résultait en une diminution du nombre de capsides intracellulaires et induisait une importante diminution de l’expression des gènes viraux. Nous avons aussi démontré que la fraction de DDX3X incorporée dans le virion contribuait activement au cycle infectieux d’HSV-1. Ces résultats confirment l’intérêt de notre approche afin d’étudier les interactions hôte-pathogène en plus de démontrer la contribution des protéines cellulaires incorporées à HSV-1 dans l’infection virale. / Viruses exploit the cellular machineries in many ways and several viruses specifically incorporate host proteins. To understand their biological relevance, we recently performed the first comprehensive characterization of the mature herpes simplex virus type 1 (HSV-1) in which up to 49 distinct cellular proteins were identified by mass spectrometry. In the present study, we sought to identify which of these cellular factors are critical for the HSV-1 life cycle. To this end, we performed a functional screen using small interfering RNA (siRNA) and a GFP-tagged virus, which indicated that at least 17 of the virion-incorporated host proteins alter HSV-1 proliferation in cell culture. Interestingly, these include several Rab GTPases and other intracellular transport components as well as proteins involved in signal transduction, gene regulation and immunity. Among them, the DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked protein (DDX3X) is a multifunctional molecule previously linked to several other viruses. Its relevance for HSV-1 was further confirmed with different siRNA reagents and cell lines, including a DDX3X thermosensitive cell line. We found that DDX3X inactivation reduced intracellular capsid abundance via a strong inhibition of viral gene expression. We also report evidence that the pool of DDX3X present in the mature virions actively contributes to HSV-1 life cycle. Altogether, this highlights a powerful and biologically relevant approach to characterize host-pathogen interactions and points to the important contribution host proteins within mature viral particles.
214

Herpesvirus Infection and Immunity in Neurocognitive Disorders

Westman, Gabriel January 2015 (has links)
Herpesviruses have co-speciated with several vertebrate and invertebrate animals throughout the history of evolution. In the immunocompetent human host, primary infection is usually benign, whereafter the virus is brought into life-long latency. Viral reactivation can however cause severe disease in immunocompromised, and rarely also in immunocompetent, patients. The overall aim of this thesis was to study the immunologic effects of cytomegalovirus (CMV) and herpes simplex type 1 (HSV-1) infection in neurocognitive disorders. CMV is known to promote T-cell differentiation towards a more effector-oriented phenotype, similar to what is seen in the elderly. We have addressed the frequency of CMV-specific CD8+ T-cells in Alzheimer's disease (AD). Furthermore, we have investigated whether AD patients present with a different CMV-specific immune profile, overall CD8 phenotype or inflammatory cytokine response to anti-CD3/CD28 beads, CMV pp65 and amyloid beta. Subjects with AD presented with a lower proportion of CMV-specific CD8+ T-cells compared to non-demented (ND) controls, but no differences in overall CD8 differentiation were seen. Overall, AD subjects presented with a more pro-inflammatory peripheral blood mononuclear cell (PBMC) phenotype. When PBMCs were challenged with CD3/CD28-stimulation, CMV seropositive AD subjects presented with more IFN-γ release than both CMV seronegative AD subjects and CMV seropositive ND controls. For effective screening of humoral herpesvirus immunity, both in research and in clinical practice, efficient immunoassays are needed. We have addressed the methodology of multiplex herpesvirus immunoassays and related bioinformatics and investigated antibody levels in AD patients and ND controls. Subjects with AD presented with lower levels of human herpesvirus 6 (HHV-6) IgG. However, there was no difference in HHV-6 DNA levels in PBMCs between the groups. Herpes simplex encephalitis (HSE) is a devastating disease, where antiviral treatment has greatly decreased mortality but not eliminated the associated long-term neurocognitive morbidity. We have investigated the correlation between N-Methyl-D-Aspartate Receptor (NMDAR) autoimmunity and recovery of neurocognitive functions after HSE. Approximately one quarter of all HSE cases developed NMDAR autoantibodies within 3 months after onset of disease. Antibody development was associated with an impaired neurocognitive recovery during the two year follow-up and could become an important therapy guiding factor in the future.
215

CaracterizaÃÃo fÃsico-quÃmica e estrutural de polissacarÃdeos obtidos de folhas da planta Aloe barbadensis Miller e avaliaÃÃo de suas atividades antiviral e anti-hemorrÃgica / Physico-chemical characterization and structural polysaccharides obtained from leaves of the plant Aloe barbadensis Miller and evaluation of their activities antiviral and anti-haemorrhagic

Ygor Raphael Gomes Eloy 22 March 2012 (has links)
CoordenaÃÃo de AperfeiÃoamento de Pessoal de NÃvel Superior / FundaÃÃo Cearense de Apoio ao Desenvolvimento Cientifico e TecnolÃgico / Este trabalho teve como objetivos caracterizar fÃsico-quÃmica e estruturalmente polissacarÃdeos obtidos de folhas de Aloe barbadensis e avaliar suas atividades antiviral, anti-hemorrÃgica e prÃ-coagulante e possÃveis sinais de toxicidade. Foi realizada extraÃÃo aquosa de polissacarÃdeos totais (PT) de A. barbadensis, seguido de precipitaÃÃo por etanol e remoÃÃo dos contaminantes proteicos com TCA. A cromatografia em DEAE-celulose foi eficiente no fracionamento dos PT, onde foram obtidas as fraÃÃes PI e PII. A caracterizaÃÃo fÃsico-quÃmica mostrou que a fraÃÃo PI à composta por manose (78,4%), glucose (7,3%), galactose (2,1%), fucose (2,8%) e Ãcidos urÃnicos (10,0%), e isenta de grupos Ãster sulfato. Enquanto, a fraÃÃo PII à constituÃda por manose (39,2%), glucose (22,2%), galactose (26,3%), arabinose (3,8%), xilose (1,1%), Ãcidos urÃnicos (8,0%) e grupos Ãster sulfato (12,0%). Na revelaÃÃo das bandas polissacarÃdicas da fraÃÃo PII, obtidas por PAGE e gel de agarose corados com stainsall foi constatado a presenÃa de duas bandas que apresentaram diferentes coloraÃÃes, roxa e ciana, correspondentes a presenÃa de grupos sulfato e carboxilados, respectivamente. Na anÃlise estrutural das fraÃÃes PI e PII, por espectroscopia no IR, foi demonstrado que a fraÃÃo PI apresenta unidades monossacarÃdicas de Ã-manose O-acetiladas (812,2 e 960 onda.cm-1) e Ãcidos urÃnicos neutros (1738 onda.cm-1) em sua estrutura. Diferentemente, a fraÃÃo PII, mostrou-se ser constituÃda por unidades monossacarÃdicas de manose (1014,7 onda.cm-1), galactose (1078,2 onda.cm-1), Ãcidos urÃnicos carregados negativamente (1635 onda.cm-1) e Ãster sulfato (1329,5 e 1260,9 onda.cm-1). Na avaliaÃÃo estrutural da fraÃÃo PII por RMN foi comprovado à presenÃa do grupo Ãster sulfato. Em relaÃÃo Ãs atividades biolÃgicas, o teste de citotoxicidade mostrou que os PT e as fraÃÃes PI e PII nÃo apresentaram toxicidade para a maioria das cÃlulas testadas e nÃo foram eficientes na inibiÃÃo de vÃrus nÃo envelopados Ad-19 e Ad-41. No entanto, os PT e a fraÃÃo PI foram capazes de inibir a infecÃÃo causada por HSV-1 e HSV-2. Em ensaios com metapneumovÃrus (HMPV), a fraÃÃo PII apresentou atividade antiviral superior à ribavirina. Embora os PT e as fraÃÃes PI e PII nÃo terem apresentado atividade contra dengue vÃrus sorotipo 1 (DENV-1), os PT puderam inibir a hemorragia em ratos, diminuindo o tempo de sangramento e o tempo de protrombina. Os PT nÃo apresentaram toxicidade em camundongos, mas aumentaram o tamanho do baÃo e o nÃmero de plaquetas sanguÃneas. Pode ser concluÃdo que extratos foliares de A. barbadensis podem apresentar polissacarÃdeos neutros ou carregados negativamente por grupos carboxilados/sulfatados. Em adiÃÃo, alÃm de apresentar atividade inibitÃria contra os vÃrus HSV-1, HSV-2 e HMPV, podem tambÃm apresentar efeito anti-hemorrÃgico e prÃcoagulante, propriedades essas, importantes, visto que a complicaÃÃo de muitas viroses leva a quadros hemorrÃgicos. AlÃm disso, os PT de A. barbadensis nÃo apresentaram toxicidade expressiva, podendo ser utilizada como agente terapÃutico seguro e eficaz. / The aim of this study was to investigate the physicochemical and structural parameters of polysaccharides obtained from Aloe barbadensis leaves and to evaluate the antiviral and cytotoxic activities and procoagulant, anti-bleeding effects. In addition, toxicological analysis was carried out. The pulp was submitted to aqueous extraction (70 ÂC) and the total polysaccharides (PT) obtained by ethanol precipitation, TCA was used to remove the protein contamination. The fractionation of PT with DEAE-celulose resulted in two fractions (PI and PII). The physicochemical characterization showed that PI fraction presents mannose (78,4%), glucose (7,3%), galactose (2,1%), fucose (2,8%) and uronic acid (10,0%). Sulfate esters were not detected in PI fraction. On the other hand, PII fraction presents the monosaccharides mannose (39,2%), glucose (22,2%), galactose (26,3%), arabinose (3,8%), xylose (1,1%), uronic acids (8,0%) and sulfate esters groups (12,0%). The polysaccharidics of PII obtained by PAGE and agarose gel electrophoresis were revealed with toluidine blue and stainsall dye showing the presence of two different bands, one purple (indicative of sulfate) and another cyan (indicative of carboxilated groups). Structural analysis of PI and PII fractions by IR spectroscopy demonstrated that PI fraction is composed of residues of Ã-mannose O-acetylated (812.2 and 960 cm-1) and uronic acids (1738 cm-1). In contrast, the PII fraction is composed of mannose (1014.7 cm-1), galactose (1078.2 cm-1), negatively charged uronic acids (1635 cm-1) and sulfate ester (1329.5 and 1260.9 cm-1). These results corroborate with NMR analyses that suggest the presence of sulfate groups in PII structure. The cytotoxicity evaluation showed that PT and the fractions PI and PII did not show toxicity against most of tested cells and the same fractions were not effective against non-enveloped virus (Ad 19 and Ad 41) inhibition. However, the PT and PI fraction were able to inhibit the infection caused by HSV-1 and HSV-2. In addition, PII fraction presents antiviral activity against metapneumovirus. Although the PT and the fractions PI and PII did not show activity against dengue virus serotype 1 (DENV-1), PT could inhibit the bleeding effects in rats, reducing the bleeding and prothrombin time. The PT showed no toxicity in mice, but increased spleen size and number of blood platelets. In conclusion, A. barbadensis leaves contain neutral or negatively charged carboxylated/sulfated polysaccharides. In addition, besides having inhibitory activity against HSV-1, HSV-2 and HMPV, they can also anti-bleeding and procoagulant effect. Moreover, the PT of A. barbadensis showed no significant toxicity and can be used as a safe and effective therapeutic agent.
216

Glycoprotein M and ESCRT in herpes simplex virus type 1 assembly

Ren, Yudan January 2012 (has links)
Herpes simplex virus type 1 (HSV-1) has a large linear double-stranded DNA genome in an icosahedral capsid shell, a cell-derived lipid envelope and a proteinaceous tegument layer. There are over fifty viral proteins and many host proteins identified in HSV-1 virions. The final formation of mature virus particles requires the membrane wrapping of tegumented capsids in the cytoplasm, a process termed secondary envelopment. This process involves the coordination of numerous viral and cellular proteins and results in double-membrane structures with enveloped virions contained within cellular vesicles. Mature viruses are then released through the fusion of these virion-containing vesicles and plasma membranes. This thesis describes investigation into the functions of viral glycoprotein M (gM) and the cellular Endosomal Sorting Complexes Required for Transport (ESCRT) in secondary envelopment. Firstly, it has been reported that gH/L can be efficiently internalised and targeted to the TGN by the co-expression of gM in transfection assays. In order to examine the role of gM in guiding the localisation of viral proteins in infected cells, a HSV-1 gM deletion virus (∆gM), and its revertant virus were constructed. The major phenotype demonstrated was that the absence of gM caused the internalisation of cell surface gH/L to be inhibited and higher levels of gH/L to be observed on the cell surface. Further, lower levels of gH/L were detected in purified ∆gM virions, which was in agreement with the delayed entry kinetics, smaller plaque sizes and greater replication deficits at low multiplicity of infection observed in ∆gM infected cells. Over all the results presented in this thesis demonstrate that in infected cells the efficient incorporation of gH/L into virions relies on the function of gM in HSV-1. Secondly, during HSV-1 secondary envelopment the budding and scission of the viral envelope from the host membrane share topological similarities with the formation of intraluminal vesicle in multivesicular bodies, retrovirus budding, and abscission at the end of cytokinesis, processes that require the cellular ESCRT machinery. There are four multiprotein ESCRT complexes and many associated proteins involved in their regulation. It has been previously shown that the ESCRT-III complex and a functional ATPase VPS4 are required for HSV-1 secondary envelopment, but different from the strategy utilised by HIV-1, the recruitment of ESCRT during HSV-1 infection is independent of TSG101 and/or ALIX. Data presented in this thesis demonstrate that CHMP4A/B/C proteins of the ESCRT-III complex are specifically crucial for HSV-1 secondary envelopment. Simultaneous depletion of CHMP4A/B/C proteins significantly inhibited HSV-1 replication. Ultrastructure analysis revealed that there were virtually no extracellular virions in CHMP4A/B/C depleted samples while more free capsids were observed in the cytoplasm, although the nuclear capsids and primary envelopment events appeared to be normal. In order to identify interactions between HSV-1 and ESCRT proteins, 22 HSV-1 tegument proteins were cloned and tested against a panel of ESCRT and ESCRT-associated proteins in yeast two-hydrid assays. Analysis of positive hits from yeast two-hybrid interaction screens using GST pull-down, co-immunoprecipitation and protein co-localisation assays have validated interactions of pUL47 with CC2D1A/1B, CIN85, CHMP6 and ALIX, pUL46 and pUL49 with CC2D1A/1B and CIN85, and pUL16 with CC2D1A/1B. Furthermore, the newly identified ESCRT associated proteins CC2D1A and CC2D1B have been detected in purified virions. The role of the identified ESCRT proteins in HSV-1 replication has been investigated using siRNA depletion. Unfortunately siRNA depletions of the various ESCRT candidates individually or in combinations did not show any significant effect on HSV-1 replication. Overall these data suggest that unlike HIV and other retroviruses, HSV-1 has evolved multiple parallel pathways to hijack the ESCRT machinery to facilitate its replication, particularly, through the interactions that lead directly to the recruitment of CHMP4A/B/C proteins. Disruption of some of these pathways did not prevent HSV-1 replication in tissue culture, suggesting any one potential pathway is sufficient for ESCRT recruitment to sites of HSV-1 assembly.
217

Age related seroepidemiological survey of measles, mumps, rubella, varicella zoster, herpes simplex type 1 and 2 viruses

Wong, Kiing Aik January 2015 (has links)
Age stratified seroepidemiological studies play a crucial role in the design and assessment of vaccination strategies. An existing multiplex bead immunoassay for measles, mumps, rubella and varicella zoster virus antibodies together with a newly developed multiplex bead immunoassay for herpes simplex virus type 1 and type 2 antibodies were used to investigate the age-related seroepidemiology of these viruses in England during 2012.To develop the HSV-1 and HSV-2 antibody assay, attempts were made to produce full length of HSV-1 and HSV-2 glycoprotein G using a baculovirus vector expression system. While HSV-1 gG protein was produced, the proteins were extensively aggregated. Native glycoprotein G molecules undergo partial removal of HSV-1 signal sequence and HSV-1 short membrane anchor sequence during post translational modification. It is possible that such post translational modification is not performed when protein is processed in insect cell culture. Attempts to produce an HSV-2 glycoprotein G were not successful. It is possible that the high GC-content of HSV-2 glycoprotein G led to poor fidelity of copying the PCR amplification sequence. Commercially available truncated HSV-1 gG and HSV-2 gG were therefore used to develop a duplex microbead immunoassay for the simultaneous detection of specific HSV antibodies in human sera. The resultant assays performed with low sensitivity and specificity (HSV-1 of 89% and 66%, respectively and for HSV-2 of 79% and 85%, respectively) compared to the reference HerpeSelect ELISA.The MMRV multiplex bead immunoassay proved rapid, and required minimal sample volume to semi-quantify MMRV specific antibodies. The seroepidemiology of MMR results was compared with previous seroepidemiological studies performed in 1996 in England. The comparison showed an increase in the proportion of individuals who were positive for mumps and measles antibodies in the 2012 survey. The proportion of individuals positive for rubella was essentially unchanged. The increase in the proportion of individuals positive for mumps and measles antibodies in 2012 show the effectiveness of the change in MMR vaccination policy for England from 1996 onward. For VZV, the proportion of individuals who were positive for varicella antibodies between the 1996 and 2012 serological surveys were essentially unchanged. The comparison showed that most young children are susceptible to VZV. At this level of immunity, it can be expected that varicella will continue to produce epidemics of infection in the population, unless varicella vaccination is implemented as a part of routine childhood vaccination.
218

Investigating the Role of PIR1 and CD200R1 in the Innate Immune Response to Viral Pathogens

MacKay, Christopher R. 30 May 2017 (has links)
After initially being infected with a virus, before an adaptive immune response can be mounted, the innate immune system of a cell recognizes and responds to certain patterns present in pathogenic molecules. I studied the role of two genes—PIR1 and CD200R1—on the innate immune responses in two different mouse models of viral infection, infection with the picornavirus EMCV (encephalomyocarditis virus) and infection with HSV-1 (herpes simplex virus) in a mouse model of herpes simplex encephalitis, respectively. PIR1 is a putative RNA phosphatase that has been shown to play an important role in antiviral small RNA processing in C. elegans. It has also been shown to interact with the RIG-I-like receptor LGP2 in preliminary mammalian experiments. I sought to characterize the effect PIR1 has on the innate immune response to the virus EMCV in mice. By developing a PIR1-null mouse, I have found that the role of PIR1 in the progression of EMCV in mice is limited. However, in vitro studies show that PIR1 might play an important role in regulating foreign RNA recognition during the earliest time points post-infection. CD200R1 is an anti-inflammatory signaling molecule that is expressed on myeloidderived cells, and whose ligand is highly expressed within the central nervous system. I investigated the role of this receptor in an intracranial model of herpes simplex encephalitis. CD200R1KO mice show improved survival following direct intracranial infection with HSV. I found this increased survival can be attributed to decreased levels of viral replication in CD200R1KO compared to wild-type mice. Further investigation has shown that CD200R1 affects the signaling and upregulation of the pattern-recognition receptor TLR-2 (toll-like receptor 2), and thus CD200R1 may impact HSV-1 replication by affecting TLR2 signaling.
219

Dissecting the Role of Cytosolic Nucleic Acid Sensors in the Type I Interferon Response to Herpes Simplex Virus-1 and other Ligands: A Dissertation

Thompson, Mikayla R. 15 April 2014 (has links)
The innate immune system provides the first line of defense against infection. Pathogens are detected though a variety of Pattern Recognition Receptors (PRRs), which activate downstream signaling cascades. Effector molecules such as cytokines and chemokines are released upon activation and aid in cell recruitment, control of pathogen replication, and coordination of the adaptive immune response. Nucleic acids that are released into the cytosol during viral and bacterial infection are recognized through a special class of PRRs, coined cytosolic nucleic acid sensors. Upon recognition, these receptors induce the production of type I interferons and other cytokines to aid in pathogen clearance. Although many cytosolic nucleic acid sensors have been discovered, it is unclear how they work in concert to mediate these responses. The Interferon Gamma Inducible protein (IFI)16 and its proposed mouse orthologue IFI204 are cytosolic DNA sensors that have been linked to the detection of cytosolic DNA during infection with Herpes Simplex Virus (HSV-1). IFI16 binds dsDNA that has been released into the cytosol during viral infection and engages the adaptor molecule Stimulator of Interferon Genes (STING) leading to TANK binding kinase-1 (TBK1) dependent phosphorylation of interferon regulatory factor 3 (IRF3) and transcription of type I interferons and interferon stimulated genes. In addition to its role as a sensor, in chapter two of this thesis we describe a broader role for IFI16 in the regulation of the type I IFN response to RNA and DNA viruses in anti-viral immunity. In an effort to better understand the role of IFI16 in coordinating type I IFN gene regulation, we generated cell lines with stable knockdown of IFI16 and examined responses to DNA and RNA viruses as well as other inducers of IFN such as cyclic-dinucleotides. As expected, stable knockdown of IFI16 led to a severely attenuated type I IFN response to cytosolic DNA ligands and DNA viruses. In contrast, expression of the NF-κB regulated cytokines such as IL-6 and IL-1β were unaffected in IFI16 knockdown cells, suggesting that the role of IFI16 in sensing these triggers was unique to the type I IFN pathway. Surprisingly, we also found that knockdown of IFI16 led to a severe attenuation of expression of IFN-α and IFN stimulated genes such as RIG-I in response to cyclic GMP-AMP (cGAMP), a second messenger produced in response to cGAS, as well as RNA ligands and viruses. Analysis of IFI16 knockdown cells revealed compromised occupancy of RNA polymerase II on the IFN-α promoter in IFI16 knockdown cells suggesting that transcription of ISGs is dependent on IFI16. Since IFI16 knockdown compromised not only DNA virus driven pathways, we propose additional regulatory roles outside of DNA sensing. Collectively, these results indicate that IFI16 plays a role in the regulation of type I IFN gene transcription and production in response to both RNA and DNA viruses. The role of IFI16/IFI204 has been studied extensively in vitro, however the role of the receptors in vivo has yet to be determined. In chapter three of this thesis, we developed a mouse deficient in IFI204 to explore the role of IFI204 in in vivo immune responses to viruses. We investigated the ability of IFI204 deficient cells to induce type I interferons and other cytokines in response to a panel of DNA and RNA ligands in vitro. IFI204 deficient BMDMs displayed a partial defect in type I interferon induction in response to both DNA and RNA ligands and viruses as compared to WT mice. We also observed that this phenotype is time dependent, since there was no change in type I interferon induction after 12 hours post infection as compared to earlier time points. In contrast to these results, expression of the NF-κB regulated cytokines IL-6 and IL-1β were unaffected in IFI16 knockdown cells. These results suggest that IFI204 plays a partial role in the induction of type I interferons in response to both DNA and RNA ligands. Additionally, IFI204 may work in tandem with other receptors in a sequential manner to amplify the type I interferon response. We also studied the involvement of IFI204 in an in vivo model of HSV-1 infection. IFI204 knockout mice produce less brain and serum IFN-β, IL-6, and IL-1β 72 hours post intraperitoneal infection with HSV-1. Furthermore, IFI204 -/- mice are more susceptible to HSV-1 infection as compared to WT mice. These data indicate that IFI204 mediates the response to HSV-1 in vivo by inducing the production of cytokines that are necessary for the control of viral infection.
220

Determining the Effect of HSP90 Inhibitor Geldanamycin on Herpes Simplex Virus Type-1 Production in Infected Vero Cells

Scherer, Brooklynn M. 30 April 2019 (has links)
No description available.

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