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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
91

Quantification of the cross-sectoral impacts of waterweeds and their control in Ghana

Akpabey, Felix Jerry January 2012 (has links)
The Akosombo Dam on the Volta River in Ghana was built in 1963 to provide cheap energy to fuel industry and to accelerate the economic growth of the country. It provides hydroelectric power, enhanced fishing and water transportation upstream, and improved opportunities for irrigated farming, especially in the lower reaches, and their attendant economic multiplier effects. A few years after the construction of this major dam, a rapid expansion of industrialization took place in Ghana. This brought about an exponential increase in demand for more electrical power. This led to the construction of a smaller dam at Akuse, downstream of the Akosomho Dam in 1981 and the formation of a headpond at Kpong. The impoundment of the river at the two sites (Akosombo and Kpong) caused an alteration in the existing ecological and biophysical processes in the river basin, including a slowing of the flow of the river, upstream and downstream. Changes in the natural processes, such as a reduction in the flow of the river and an increase in nutrient status of the water, resulted in an invasion of aquatic weeds, increasing the density of aquatic snails (intermediate hosts of schistosomiasis), silting and closure of the estuary, as well as other more subtle effects. The invasion of the river's main course and the dams by aquatic plants led to a corresponding reduction of navigable water both upstream and downstream. The aim of this thesis was to quantify the impact and control of waterweeds, especially water hyacinth, Eichhornia crassipes (Mart) Solms-Laubach (Pontederiaceae), in Ghana. A floral survey on the Kpong Headpond recorded 49 emergent, 12 free floating and I submerged aquatic plant species, many of which were indigenous, but the exotic or introduced water hyacinth was recorded at most of the sampling sites, and was the most abundant and had the biggest impact on the utilization of the water resource. Mats of water hyacinth served as substrates for other, indigenous species to grow out into the main channel of the headpond, including the intake point of the Kpong head works of the Ghana Water Company Limited (GWCL) and landing sites for boats. These mats resulted in a reduction of the fish (fin and shell) harvest, reducing the annual production to far below demand. Water hyacinth was also shown to have severe health implications. A survey of the Ministry of Health records showed that the prevalence of both urinary and intestinal schistosomiasis had risen significantly over time as the abundance of waterweeds, most notably water hyacinth, increased, and ranged between 70% and 75% but up to 100% in some lakeside communities. Based on the work done by an NGO on board the medical boat ("Onipa Nua "), losses in terms of money due to the effect on health of the aquatic weed infestations on the Volta River in 2006 amounted to US$ 620,000. Economic losses due to invasive alien aquatic weeds were also calculated on the Oti River Arm of Lake Volta. It was estimated that about US$2.3 million per annum would be lost to the Volta Lake Transport Company and individual boat transport operators if this section of the river were 100% covered by aquatic weeds (water hyacinth and Salvinia molesta D.S. Mitchell (Salviniaceae)). It was also estimated that US$327,038 was spent annually in monitoring and managing the weeds in the Oti River. Control interventions for aquatic weeds have been implemented in river systems in Ghana. The biological control agents Neochetina bruchi Hustache (Coleoptera, Curculionidae) and Neochetina eichhorniae Warner (Coleoptera, Curculionidae) have been used on water hyacinth infestations in the Oti River Arm of Lake Volta, the Tano River and the Lagoon complex in the south-western part of the country. Cyrtobagous salviniae Calder and Sands (Coleoptera: Curculionidae) has been used to control salvinia, and Neohydronomous affinis Hustache (Coleoptera: Curculionidae) to control water lettuce, Pistia stratiotes Lilmaeus (Araceae) in the Tano River and Lagoon complex. Although these projects have been regarded as successful, they have relied on research from elsewhere in the world and no postrelease quantification has been conducted. In evaluating the impact of the biological control agents Neochetina bruchi and Neochetina eichhorniae weevils on water hyacinth infestations in the Tano River, fresh adult feeding scars were recorded as well as the numbers of adult weevils on each water hyacinth plant sampled at six sites. Despite being released in 1994, weevil numbers and resultant damage to plants in the Tano Lagoon was low in comparison to other regions of the world where these agents have been used. The main reason for this is that this lagoon floods seasonally, washing weevil-infested plants out to sea. Water hyacinth then re-infests the lagoon from seed and the weevil populations are low. To resolve this situation, two courses of action are proposed. The first is to mass rear the weevils along the shore of the lagoon and release them when the first seedlings recruit. The second proposal is that additional agents that have shorter lifecycies and are more mobile than the weevils should be released. To this end, the water hyacinth mirid, Eccritotarsus catarinensis (Carvalho) (Hemiptera: Miridae) was imported from South Africa and released onto the Tano Lagoon in 2009. Retrospective laboratory host specificity trials were conducted on Neachetina eichharniae and Neachetina bruchi weevils 15 years after their release into Ghana to see if any variation in their host ranges had occurred. Considerable damage was inflicted on the E. crassipes leaves by the Neachetina weevils, while little feeding damage was recorded on both Heteranthera callifalia Kunth. (Pontederiaceae) and Eichharnia natans (P.Beauv.) Solms (Pontederiaceae). All the weevils introduced on H callifalia and E. natans died after the first week. This study served to confirm the host specificity and thereby the safety of these agents. Invasive alien aquatic macrophytes have negative impacts on the environment and economy of Ghana. The control of these weeds is essential to socioeconomic development and improved human health standards in riparian communities. Biological control offers a safe and sustainable control option, but requires diligent implementation. However, aquatic weed invasion is more typically a result of the anthropogenically induced eutrophication of water bodies, and this is the main issue that has to be addressed.
92

Biodiversity change in the Cerrado following invasive pine tree establishment

Rocha Kortz, Alessandra January 2017 (has links)
How do newly established species interact with existing assemblage members to alter local biodiversity? This question is especially topical given growing concerns about increased temporal turnover levels relative to background rates. My PhD thesis concerns young, isolated pines Pinus elliottii invading the Cerrado (Brazilian savanna) as a study system to test the hypothesis that the impact of newly established individuals varies across habitat layers. I sampled both vegetation layers (shrub and grass) of two distinct habitats, the shrub-dominated campo sujo and the grass-dominated campo úmido. My results show that the pine is changing α diversity in the dominant vegetation layer of each habitat: the shrub layer of campo sujo and the grass layer of campo úmido. The shape of the diversity v. establishment time relationship is habitat dependent; there is a hump shaped relationship between diversity and pine size in the grass layer but a linear one in the shrub layer. β diversity metrics – which take species composition into account - reveal marked differences in species composition between the habitats in the shrub layer, whereas the corresponding pair of invaded and control sites of the same habitat and layer is more similar than expected (in both vegetation layers). The degree of similarity between sites also changes as the invasion proceeds. In the campo sujo habitat, sites become more compositionally distinct, whereas in the grass layer of campo úmido sites get more similar. This suggests that the timing of changes in species composition is habitat-dependent and reinforces the need to remove the invader individuals from the area. My results show that, though complex, the consequences for local biodiversity of non-native species establishment are not haphazard. As such they contribute to the understanding of species coexistence and help explain why species invasion can lead to very different biodiversity outcomes.
93

Status of Nutria (Myocastor coypus) Populations in the Pacific Northwest and Development of Associated Control and Management Strategies, with an Emphasis on Metropolitan Habitats

Sheffels, Trevor Robert 07 March 2013 (has links)
The nutria (Myocastor coypus) is a semi-aquatic rodent native to South America that was introduced to the Pacific Northwest, USA, in the 1930s. Primary damage categories from this invasive species include burrowing and herbivory, resulting in habitat degradation. Nutria have become well-established in metropolitan habitats, and anecdotal information suggests the problem has increased in recent years. However, little regional research on the species has been conducted. The scope of this research, which emphasizes metropolitan habitats, includes three primary foci in relation to nutria populations in the Pacific Northwest: modeling habitat suitability, assessing activity and movement patterns, and identifying and managing negative impacts. Large-scale management of any invasive species requires understanding of the current and potential future population distribution. Cold temperatures have been assumed to be a limiting factor for the geographic distribution of nutria populations, but this assumption had not been explicitly tested. A mechanistic habitat suitability model based on winter temperatures performed well in predicting nutria distribution in the Pacific Northwest and nationally. Regional results suggest nutria currently occupy most accessible suitable habitat. However, coupling the model with future climate change data suggests a much larger suitable habitat zone regionally and nationally in the near future. Management of an invasive species on a local scale requires region-specific information about behavior patterns. Radio-telemetry tracking of local nutria populations in metropolitan habitats suggested higher diurnal activity levels than reported elsewhere. Activity areas were also on the lower end of reported nutria home ranges, suggesting the studied metropolitan wetland sites represent core habitat for nutria in the region. Comparison of two transmitter attachment methods, a neck collar and a tail mount, did not identify a clearly superior attachment method for short-term nutria behavior studies. The presence of nutria in metropolitan habitats in the Pacific Northwest necessitates the need to expand the limited management techniques available for these habitats. Standard Vexar® plastic mesh tubes very effectively mitigated nutria herbivory damage to woody vegetation live stakes planted in a metropolitan habitat restoration site. A recently developed nutria multiple-capture cage trap captured larger nutria and reduced non-target captures compared to a standard cage trap. The design of the multiple-capture trap, however, prevented multiple-capture events because small nutria escaped the trap. This research contributes substantially to previously limited information about nutria in the Pacific Northwest and resulted in several new findings. Climate change modeling provides the first evidence that nutria ranges could expand in the near future. Evaluation of new radio-telemetry methods will benefit future behavior studies. The assessment of new damage prevention tools provides more options for the management of nutria in urban habitats. Management recommendations include creating regional nutria management plans, identifying and targeting priority monitoring regions, finding key stakeholders, focusing on public education, and initiating a pilot control program. Recommendations for research include evaluating effects on native fauna, conducting disease surveys, assessing the extent of damage, continuing habitat suitability analysis, and developing population indices.
94

Forage Adaptability Trials for Forage and Seed Production in Bolivia; Effect of 5 Herbicides on 7 Native Utah Forbs

Voss, Joshua C. 05 December 2006 (has links) (PDF)
The harsh environmental and poor economic conditions of the Bolivian Altiplano require intervention to assist many of those that live there to become economically self-sufficient. We attempted to find introduced dry season reserve forage grasses that could produce enough biomass to be useful as feed for livestock, and that could also produce enough seed to distribute to farmers. While some of the grasses produced reasonable amounts of biomass, none produced seed in quantities that would be even close to being economically viable. The most likely cause of this is that the timing of resources that the grasses need to flower is very different between Bolivia and the areas from which the grasses originally came. We concluded that either the conditions under which the grasses are grown would need to be changed (i.e., earlier irrigation), or pre-adapted native species should be used. Native forbs are a critical component of any natural ecosystem, and thus should be included in wildland restoration projects. However, because the seed is currently collected by hand from the wild, it is very expensive, and this limits the ability of land managers to utilize it. A possible solution to this dilemma is for growers to commercially produce the seed and thus drive down the cost. In such a situation, it would be necessary to use herbicides to control competing weeds. We analyzed the effects of 5 herbicides on 7 species of native Utah forbs at 3 growth stages to learn which herbicides could safely be used on the test plants. We found that the plants' reaction the herbicides is largely species- and growth-stage specific.
95

Identifying Induced Bias in Machine Learning

Chowdhury Mohammad Rakin Haider (18414885) 22 April 2024 (has links)
<p dir="ltr">The last decade has witnessed an unprecedented rise in the application of machine learning in high-stake automated decision-making systems such as hiring, policing, bail sentencing, medical screening, etc. The long-lasting impact of these intelligent systems on human life has drawn attention to their fairness implications. A majority of subsequent studies targeted the existing historically unfair decision labels in the training data as the primary source of bias and strived toward either removing them from the dataset (de-biasing) or avoiding learning discriminatory patterns from them during training. In this thesis, we show label bias is not a necessary condition for unfair outcomes from a machine learning model. We develop theoretical and empirical evidence showing that biased model outcomes can be introduced by a range of different data properties and components of the machine learning development pipeline.</p><p dir="ltr">In this thesis, we first prove that machine learning models are expected to introduce bias even when the training data doesn’t include label bias. We use the proof-by-construction technique in our formal analysis. We demonstrate that machine learning models, trained to optimize for joint accuracy, introduce bias even when the underlying training data is free from label bias but might include other forms of disparity. We identify two data properties that led to the introduction of bias in machine learning. They are the group-wise disparity in the feature predictivity and the group-wise disparity in the rates of missing values. The experimental results suggest that a wide range of classifiers trained on synthetic or real-world datasets are prone to introducing bias under feature disparity and missing value disparity independently from or in conjunction with the label bias. We further analyze the trade-off between fairness and established techniques to improve the generalization of machine learning models such as adversarial training, increasing model complexity, etc. We report that adversarial training sacrifices fairness to achieve robustness against noisy (typically adversarial) samples. We propose a fair re-weighted adversarial training method to improve the fairness of the adversarially trained models while sacrificing minimal adversarial robustness. Finally, we observe that although increasing model complexity typically improves generalization accuracy, it doesn’t linearly improve the disparities in the prediction rates.</p><p dir="ltr">This thesis unveils a vital limitation of machine learning that has yet to receive significant attention in FairML literature. Conventional FairML literature reduces the ML fairness task to as simple as de-biasing or avoiding learning discriminatory patterns. However, the reality is far away from it. Starting from deciding on which features collect up to algorithmic choices such as optimizing robustness can act as a source of bias in model predictions. It calls for detailed investigations on the fairness implications of machine learning development practices. In addition, identifying sources of bias can facilitate pre-deployment fairness audits of machine learning driven automated decision-making systems.</p>
96

Enemy within the gates : reasons for the invasive success of a guppy population (Poecilia reticulata) in Trinidad

Sievers, Caya January 2010 (has links)
The invasion of individuals into new habitats can pose a major threat to native species and to biodiversity itself. However, the consequences of invasions for native populations that are not fully reproductively isolated from their invaders are not yet well explored. Here I chose the Trinidadian guppy, Poecilia reticulata, to investigate how different population traits shaped the outcome of Haskins's introduction, a well-documented invasion of Guanapo river guppies into the Turure river. I especially concentrated on the importance of behaviour for invasive success. I investigated if the spread of Guanapo guppies is due to superiority in behaviour, life-history and/or genetics, or if the outcome of this translocation is due to chance. Despite the fact that by today the invasive front has passed the Turure's confluence with the River Quare many kilometres downstream of the introduction site, and the original genotype only survives in small percentages, as was revealed by genetic analysis in this and other studies, no obvious differences between invasive and native populations could be detected in any of the tested behavioural, life-history and genetic traits. When tested for mate choice, neither Guanapo nor Oropuche (Turure) males seemed to be able to distinguish between the population origin of females, but courted and mated at random. At the same time, females did not prefer to school with individuals of the same population over schooling with more distantly related females. The formation of mixed schools after an invasive event is therefore likely. Because female guppies showed a very low willingness to mate, even after having been separated from males for up to six months, sperm transfer through forced copulations will become more important. Taken together, these behaviours could increase the speed of population mixing after an invasion without the need for behavioural superiority of the invasive population. When tested for their schooling abilities, offspring of mixed parentage, in contrast to pure breds, displayed a large amount of variety in the time they spent schooling, a circumstance that can potentially influence survival rates and therefore the direction of gene pool mixing. Guanapo fish did not show reproductive superiority in a mesocosm experiment, where both populations were mixed in different proportions. On the contrary, in two out of three mixed treatments, the amount of Oropuche (Turure) alleles was significantly higher than expected from the proportion of initially stocked fish. The almost complete absence of distinguishable traits other than genetic variation between the examined populations that belong to different drainage systems, opposes the recent split of the guppy into two different species following drainage system borders, as is argued in this thesis. However, the successful invasion of the Turure by Guanapo guppies and the nearly entire disappearance of the original population can be explained in absence of differing population traits. Here I demonstrate how behavioural and genetic interactions between subspecies influence the outcome of biological invasions and second, how factors other than population traits, such as the geographic situation, can produce an advantageous situation for the invader even in the absence of population differences.
97

Propriétés syntaxico-sémantiques des verbes à complément en -e en coréen / Syntactico-semantic features of Korean verbs with an N-e complement

Kim, So-Yun 06 December 2010 (has links)
Cette étude est une classification générale des constructions verbales et une description des propriétés syntaxico-sémantiques des verbes à complément essentiel introduit par la postposition e en coréen. Ce travail a pour modèle théorique le lexique-grammaire, qui a été élaboré par M. Gross (1975), sur la base des principes de Z. S. Harris (1968). Dans cette étude, nous avons examiné les propriétés syntaxico-sémantiques des 3000 verbes demandant ce complément et nous les avons regroupés en 8 classes. Ces propriétés constitueront des informations syntaxiques qui servent à l'analyse de structure d'une phrase et au traitement automatique des textes en coréen / This study is a general classification of verbal constructions and a syntactico-semantic description of the Korean verbs with essential complements introduced by the postposition e. The theoretical model of this study is the Lexicon-grammar by M. Gross (1975), which is based on the theory of Z. S. Harris (1968). In this study, we examined the syntactico-semantic features of the 3000 verbs requiring that complement and classified them into 8 classes. Those syntactico-semantic features will constitute the syntactic information which serves the structure analysis of a sentence and the automatic text retrieval in Korean
98

Interações tróficas de representantes da ictiofauna introduzida e nativa, na fase jovem, em lagos do Vale do rio Doce - MG / Trophic interactions of introduced and native ichthyofauna juvenile representatives, in Vale do rio Doce lakes, Minas Gerais State

Assumpção, Anelise Marcos de 24 March 2005 (has links)
Estudos realizados no sistema lacustre do Vale do rio Doce revelam um empobrecimento da ictiofauna após a introdução das espécies alóctones tucunaré (Cichla ocellaris) e piranha (Pygocentrus nattereri). Estas espécies, na fase adulta, não apresentam nenhum predador ou competidor efetivo nos ambientes estudados. Neste contexto e visando contribuir para medidas de manejo e prevenção de impactos com a introdução de espécies, este estudo objetivou conhecer a alimentação e avaliar, por meio de experimentos em laboratório, a seletividade alimentar e eficiência de alevinos destas duas espécies introduzidas na captura de invertebrados planctônicos comparadas a Astyanax cf bimaculatus e Geophagus brasiliensis (espécies nativas). Os alevinos, capturados em diferentes lagoas, foram medidos, pesados e tiveram seus estômagos analisados. A seletividade alimentar foi calculada através do índice de seletividade qualitativa de IVLEV (1961) e o índice da razão de procura por alimento (FRi) de Edmondson e Winberg (1971). A eficiência alimentar dos alevinos foi calculada e comparada através das taxas de predação. G. brasiliensis, A. cf bimaculatus e C. ocellaris apresentaram alimentação variada, baseada em itens de origem animal e vegetal. G. brasiliensis apresentou maior variação de itens alimentares baseado principalmente em organismos zooplânctônicos, enquanto C. ocellaris e A. cf bimaculatus consumiram essencialmente insetos. Os coeficientes de sobreposição alimentar foram significativos para G. brasiliensis, A. cf bimaculatus e C. ocellaris, indicando elevada similaridade na alimentação destas espécies. Entretanto, não foram significativos para P. nattereri, devido ao hábito exclusivamente carnívoro, desde a fase jovem. As taxas de predação diferiram significativamente na presença de outros alevinos e em diferentes concentrações de presas. Os alevinos de C. ocellaris, P. nattereri e A. cf bimaculatus foram mais eficientes na captura de presas ágeis, tais como copépodos adultos, comparados a G. brasiliensis, indicando boa adaptação na detecção, caça e sucesso na perseguição da presa, desde a fase jovem. A diversidade de peixes, amostrados na fase de alevinos, foi baixa nos diferentes ambientes estudados, não tendo sido coletadas espécies nativas nos lagos com presença de espécies introduzidas, indicando que as espécies nativas tem sido afetadas não apenas pela presença de competidores, mas também de predadores, desde a fase jovem. / Studies accomplished in the lacustrine environment of Vale do rio Doce show a decrease of the ichthyofauna after introduction of the aloctone species tucunaré (Cichla ocellaris) and piranha (Pygocentrus nattereri). These species, in mature phase, do not present any predators or effective competitors in the studied environment. In this context, and aiming to contribute to management and impact prevention measures concerning species introduction, this study was carried out to know the feeding habits and evaluate, through laboratory experiments, the feeding selectivity and efficiency of alevins of these introduced species in capturing planktonic invertebrates, compared to Astyanax cf bimaculatus and Geophagus brasiliensis (native species). The alevins, captured in different lakes, were measured, weighed and had their stomach analyzed. The feeding selectivity was calculated through the Ivlev (1961) qualitative selectivity rate, and the food searching reason rate (FRi) by Edmondson e Winberg (1971). The alevins feeding efficiency was calculated and compared through the predation rates. G. brasiliensis, A cf bimaculatus and C. ocellaris presented varied nutritional habits, based on both animal and vegetal items. G. brasiliensis presented more variation of food items based mainly on zooplanktonic organisms, while C. ocellaris and A cf bimaculatus consumed insects essentially. The feeding superposition coefficients were significative for G. brasiliensis, A. cf bimaculatus and C. ocellaris, indicating high similarity in their nutritional habits. However, they are not significative for P. nattereri, due to their exclusive carnivore habit since their juvenile phase. The predation rates differed significantly in presence of other alevins and in different prey concentrations. The C. ocellaris, p. nattereri and A. cf bimaculatus alevins were more efficient when capturing agile preys, such as adult copepods, compared to G. brasiliensis, indicating good adaptation for detecting, hunting and capturing prey since their juvenile phase. The diversity of fish, sampled in the alevin phase, was low in the different lakes studied, and native species were not collected in the lakes with introduced species, indicating that the native species have been affected not only by competitors, but also by predators\' presence, ever since their juvenile phase.
99

Non-Native Mangroves (<i>Rhizophora mangle</i>) of Moloka'i, Hawai'i: a Socio-Ecological Analysis

Lewis, Casey Lynette 05 December 2017 (has links)
The formation of novel ecosystems by non-native species poses management challenges that are both socially and ecologically complex. This complexity necessitates consideration of both ecological dynamics and social attitudes and perceptions. Red mangrove propagules were introduced to Moloka'i, Hawaii in 1902 to mitigate the effects of soil erosion and they have since spread along the coast and to adjacent islands creating novel habitat. Non-native mangroves in Hawai'i present a unique case study to examine diverse social attitudes and perceptions resulting from a long history of land cover transformations on the Hawaiian Islands, socio-cultural diversity of involved stakeholders, and the potential array of ecosystem services they may provide under changing land use and climatic conditions. Ecological dynamics were examined to (1) determine whether novel mangrove habitat affects zooplankton diversity and richness, (2) test the hypothesis that zooplankton community composition differs significantly among established mangrove and coastal non-mangrove habitat, and (3) assess other factors driving differences in zooplankton community assemblages. This study found no significant differences found between sites with and without mangroves in terms of richness, diversity, or community composition. However, lunar cycles and site dynamics, including fishpond structure, mangrove and open shoreline length, percentage of mangrove shoreline length, total percentage of carbon in mangrove leaves, and disturbance in the upstream watershed influenced zooplankton community composition. These findings suggest that non-native mangroves support community composition, richness, and diversity similar to non-mangrove areas, though some widespread taxa have lower abundances in mangrove habitat. My research suggests that in the face of declining fisheries, threatened reef habitat, and changing climate and ocean conditions, mangroves may provide zooplankton habitat in novel locations similar to that provided by native habitat, such that habitat availability for zooplankton is not hindered by non-native mangroves. To understand social dynamics 204 residents of Moloka'i, Hawaii were surveyed to evaluate: 1) attitudes and perceptions about this non-native species, 2) what factors influence these attitudes, and 3) how attitudes influence perceptions about management. A belief that mangroves should be removed, concern about threats to Moloka'i's coast, and not relying on mangroves for benefit were the primary drivers of negative attitudes towards non-native mangroves. Support for management actions was predicted by attitudes towards mangroves, perception and concern about threats to Moloka'i's coast, and experiences involving mangroves. I propose a framework for assessing and incorporating diverse perceptions and attitudes into decision-making around non-native species that have created novel ecosystems. An active management approach allowing mangroves to thrive in certain locations and to provide services such as habitat and crabbing access while in other locations limiting their extent to protect native bird habitat and cater for human needs, including safe beach and ocean access, may ultimately offer the greatest benefits to both the ecosystem and society. As environmental issues, such as species introductions, become increasingly complicated in the age of the Anthropocene, with intricate relationships made more difficult in the face of climate change, integrated research in socio-ecological systems may provide a comprehensive approach to better evaluate and understand our changing world.
100

Modification du risque d'une maladie multi-hôtes suite à l'introduction d'une espèce réservoir : cas de la maladie de Lyme et du tamia de Sibérie en Ile-de-France / Modification of a multi-host disease risk through the introduction of a reservoir species : the case of Lyme disease and of the Siberian chipmunk in French suburban forests

Marsot, Maud 09 December 2011 (has links)
La variation de la diversité des communautés d’hôtes réservoirs peut modifier le risque de maladies impliquant ces espèces. En particulier, l’introduction d’une espèce potentiellement réservoir est susceptible d’augmenter le risque de maladie, en agissant comme un réservoir supplémentaire et/ou en amplifiant la circulation des agents pathogènes chez les réservoirs autochtones. L’objectif du travail de thèse est de quantifier la contribution, d’une espèce introduite, le tamia de Sibérie (Tamias sibiricus barberi), au risque d’une maladie multi-hôtes, la borréliose de Lyme, due à des bactéries appartenant au complexe d’espèces Borrelia burgdorferi sensu lato et transmises par des tiques, principalement Ixodes ricinus en Europe. Dans un premier temps, nous avons testé si le tamia est un réservoir compétent pour la maladie de Lyme en milieu naturel, c'est-à-dire s’il est capable de transmettre B. burgdorferi sl aux tiques I. ricinus et de maintenir l’infection. Le tamia est fortement infesté par les tiques et infecté par les bactéries et il peut transmettre B. burgdorferi sl aux tiques. Nos résultats ne montrent pas clairement que le tamia peut maintenir l’infection. Une des deux composantes du risque de la maladie de Lyme pour l’homme est le risque acarologique, c'est-à-dire la densité de nymphes infectées en quête d’hôtes. Dans un deuxième temps, nous avons calculé la contribution du tamia au risque acarologique et l’avons comparé à celles du campagnol roussâtre (Myodes glareolus) et du mulot sylvestre (Apodemus sylvaticus), réservoirs avérés de B. burgdorferi sl. Puis, nous avons étudié la variation temporelle de la contribution du tamia et testé si sa présence influençait la contribution des réservoirs rongeurs natifs. Pour calculer la contribution au risque, nous avons utilisé deux approches, l’une basée sur des captures des rongeurs, et l’autre sur l’identification des espèces hôtes sur lesquelles se sont gorgées les tiques. Le tamia produit plus de nymphes infectées à l’affût que le campagnol et le mulot. La contribution du tamia varie entre années suivant la densité de tamias et intra-années suivant la disponibilité en tiques. Sa plus forte infestation par I. ricinus et infection par B. burgdorferi sl, que les rongeurs natifs, peuvent être expliquées par sa plus forte exposition aux tiques. En conclusion, le tamia semble un réservoir compétent pour B. burgdorferi sl, avec une forte contribution au risque acarologique et une amplification possible de la circulation des pathogènes dans les communautés natives. Sa présence peut augmenter le risque pour la borréliose de Lyme chez l’homme en augmentant la prévalence d’infection des nymphes, mais pas les densités de nymphes à l’affût. / The variation of the composition of host communities can modify the risk of diseases involving these species. In particular, the introduction of a potentially reservoir species may increase the disease risk, by acting as an additional reservoir or by amplifying the circulation of pathogens in the native reservoirs. We quantified the contribution of an introduced species, the Siberian chipmunk (Tamias sibiricus barberi), to the risk of a multi-host vector-borne disease, Lyme borreliosis (LB), due to bacteria that belong to the Borrelia burgdorferi sensu lato complex and transmitted by bites of hard ticks, especially by Ixodes ricinus ticks in Europe. First, we verified if the Siberian chipmunk is a competent reservoir host for LB in the field, by testing if chipmunks can transmit B. burgdorferi sl to I. ricinus ticks and maintain the infection. Chipmunks were highly infested by ticks and infected by B. burgdorferi sl, and they are able to transmit the bacteria to ticks. Our results did not show clear maintenance patterns. Second, one of the parameter of LB risk for human is the acarologic risk, which is the density of infected questing nymphs. We evaluated the contribution of chipmunks to this risk and compared it with the one of bank voles (Myodes glareolus) and wood mice (Apodemus sylvaticus), two known reservoir rodents. Moreover, we studied the variation of the contribution. We used two approaches, the one based on captures of rodents and the other one on host-blood meal analysis of questing nymphs. Chipmunks produced more infected nymphs than voles and mice. The contribution of chipmunks varies between years according to chipmunk density and during the year according to tick availability. The higher infestation by I. ricinus and infection by B. burgdorferi sl of chipmunks in comparison to native reservoir rodents, could be due to its higher exposition to ticks. As Siberian chipmunk seems to be a competent reservoir host for LB with strong contribution, they can “spillback” infection to native communities and increase the risk for LB to humans by increasing infection prevalence in nymphs, but not nymph density.

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