Thesis (Ph. D.)--Rutgers University, 2007. / "Graduate Program in Chemistry and Chemical Biology." Includes bibliographical references.

Abstract: Owing to the light-induced switching between their trans- and cis-isomers, azobenzenes display a wide range of applications including stimuli-responsive polymers, acid-base indicators, colorful systems, liquid crystals, and bio-medicals. In the past decades, much research on azobenzenes has been carried out and they have become a growing research topic. Particularly, the synthetic methodology of azobenzene derivatives has become mature. However, a general synthetic method of furnishing the bis- and tris-azobenzene compounds in one step is still lacking, and the study of bis-azobenzene is nearly blank including the solution properties and applications. In this thesis, we focus on the design, and preparation of bis-, tris- and small cyclic azobenzene derivatives; followed by a further investigation of their properties in solution. We also explore the preparation and applications of azobenzene-based stimuli-responsive polymeric materials. The first chapter describes an efficient strategy for the synthesis of bis- and tris-azobenzene derivatives. In this synthetic pathway, the bis- and tris-azobenzenes could be obtained in one pot, together with mono-azobenzene side products. By modifying the reaction conditions, the yields of the azobenzene compounds were mainly dependent on the substituents on the phenols and diazonium salts, and the molar ratio of starting materials. Compared with the unsubstituted aniline, the use of anilines with electron-withdrawing groups, leading to electron-deficient diazonium salts, favors the formation of mono-azobenzenes, rather than bis-azobenzenes. Whereas, anilines with electron-donating groups are not efficient during the first step leading to the formation of mono-azobenzene and thus favor the generation of bis-azobenzenes. Large amounts of anilines (over two-fold and three-fold excess), are the best choice to obtain bis- and tris-azobenzenes in good yields. In Chapter 2, we describe a novel method for the cyclization of mono- and bis-azobenzenes without ultraviolet light to form seven-membered heterocycles. The starting materials contain ortho-fluoro atom and ortho-phenol groups on the phenyl rings of the azobenzene systems. The role of the fluoro substituent is twofold. It promotes the stability of the cis-form of the azobenzene and it acts as a leaving group when its carbon atom neighbor is attacked by the phenolate. The nature of solvents was found to have a pronounced effect on the spontaneous cyclization reaction by stabilizing the  intermediate complex. The cyclization rate could be accelerated under the UV irradiation and by using more polar solvents. Due to the competing keto-enol tautomerizations and cyclizations, we observed complicated changes in UV-vis absorption and color of solutions over time. It was revealed that, for ortho-hydroxyl azobenzenes with ortho-fluorine atom in polar solvents, the trans-to-cis isomerization and cyclization happened under daylight, and keto-enol tautomerization occurred in the dark. In Chapter 3, we studied a class of novel dual-responsive (photo- and thermo-) copolymers by modifying Poly(N-isopropylacrylamide) (PNIPAM) with bis-azobenzene moieties. The copolymers were prepared from a free radical copolymerization of N-isopropylacrylamide (NIPAM) and bis-azobenzenes bearing electron-donating or electron-accepting substituents. It was found that bis-azobenzene moieties could influence the cloud point of aqueous copolymer solution due to the photoisomerization of bis-azobenzenes and the conformation of polymer chain upon the photoreactions. Varying substituents on bis-azobenzene moieties, the copolymer solutions displayed an opposite cloud point shift after the photoreactions of the chromophores. When the substituents on azobenzene have push-pull feature, the polymer chains prefer aggregation after UV irradiation, which decreases the cloud point. By contrast, the cloud point shifts to higher temperature upon UV light irradiation when the bis-azobenzenes bears the donors, which is caused by cis-isomer being more hydrophilic than the trans-isomer. However, the effect of photoisomerization of azobenzene on the cloud point shift appears to be greater on PNIPAM containing mono-azobenzene pendent groups. / En raison de la commutation induite par la lumière entre leurs isomères trans et cis, les azobenzènes affichent une gamme étendue d'applications. On y retrouve des polymères sensibles aux stimuli, des indicateurs acido-basiques, des systèmes colorés, des cristaux liquides et des matériaux aux applications biomédicales. Dans les dernières décennies, de nombreuses recherches sur les azobenzènes ont été menées et ils sont devenues un sujet de plus en plus important. En particulier, la méthodologie de synthèse des dérivés d'azobenzène est devenue mature. Cependant, une méthode synthétique générale pour l’obtention des composés bis- et tris-azobenzène en une seule étape est encore manquante, et l'étude du bis-azobenzène est presque vierge, y compris les propriétés et les applications en solution. Dans cette thèse, nous nous concentrons sur la conception et la préparation de bis-, tris- et de petits dérivés cycliques de l'azobenzène. Ce premier volet est suivi d'une étude plus poussée de leurs propriétés en solution. Nous explorons également la préparation et l'application de matériaux polymères d'azobenzène, réagissant à plusieurs stimulations. Le premier chapitre décrit une stratégie efficace pour la synthèse des dérivés bis- et tris-azobenzène. Dans cette voie de synthèse, les bis- et tris-azobenzènes peuvent être obtenus dans un pot réactionnel, avec des produits secondaires mono-azobenzène. En modifiant les conditions de réaction, les rendements des composés azobenzène dépendent principalement des substituants sur les phénols et les sels de diazonium, et du rapport molaire des produits de départ. Par rapport à l'aniline non substituée, l'utilisation d'anilines avec des groupes électroattracteurs, conduisant à des sels de diazonium déficients en électrons, favorise la formation de monoazobenzènes plutôt que de bis-azobenzènes. En revanche, les anilines à groupements donneurs d'électrons ne sont pas efficaces au cours de la première étape conduisant à la formation de monoazobenzènes et favorisent ainsi la génération de bis-azobenzènes. De grandes quantités d'anilines (excès de plus de deux et trois fois) sont le meilleur choix pour obtenir des bis- et tris-azobenzènes avec de bons rendements. Dans le chapitre 2, nous décrivons une nouvelle méthode de cyclisation des mono- et bis-azobenzènes, sans lumière ultraviolette, pour former des hétérocycles à sept chaînons. Les produits de départ contiennent des groupes ortho-fluoro et orthophénol sur les cycles phényle des systèmes azobenzène. Le rôle du substituant fluoro est double. Il favorise la stabilité de la forme cis de l'azobenzène et agit comme un groupe partant lorsque son atome de carbone voisin est attaqué par le phénolate. La nature des solvants s'est avérée avoir un effet prononcé sur la réaction de cyclisation spontanée en stabilisant le complexe intermédiaire . La vitesse de cyclisation peut être accélérée sous l'irradiation UV et en utilisant des solvants plus polaires. En raison des tautomérisations céto-énol et des cyclisations en compétition, nous avons observé que l’évolution des spectres d'absorption UV-vis et de la couleur des solutions au fil du temps était compliqué. Il a été révélé que, pour les ortho-hydroxyl azobenzènes avec un atome d'ortho-fluor dans les solvants polaires, l'isomérisation et la cyclisation trans-cis se produisaient à la lumière du jour et que la tautomérisation céto-énol se produisait dans l'obscurité. Dans le chapitre 3, nous avons étudié une classe de nouveaux copolymères biosensibles (photo- et thermo-) en modifiant le poly(N-isopropylacrylamide) (PNIPAM) avec des portions bis-azobenzène. Les copolymères ont été préparés à partir d'une copolymérisation radicalaire de N-isopropylacrylamide (NIPAM) et de bis-azobenzènes portant des substituants donneurs ou accepteurs d'électrons. Il a été constaté que les fragments bis-azobenzène pouvaient influencer le point de trouble de la solution aqueuse de copolymère en raison de la photoisomérisation des bis-azobenzènes et de la conformation de la chaîne polymère lors des photoréactions. En changeant les substituants sur les fragments bis-azobenzène, les solutions de copolymères présentaient un décalage du point de trouble opposé après les photoréactions des chromophores. Lorsque les substituants sur l'azobenzène ont une influence «push-pull», les chaînes polymères préfèrent l'agrégation après l'irradiation UV, ce qui diminue le point de trouble. En revanche, le point de trouble passe à une température plus élevée lors de l'irradiation par la lumière UV lorsque les bis-azobenzènes portent des donneurs, ce qui est dû au fait que l'isomère cis est plus hydrophile que l'isomère trans. Cependant, l'effet de la photo-isomérisation de l'azobenzène sur le décalage du point de trouble semble être plus important sur les groupes pendants mono-azobenzène contenant du PNIPAM.

Nous avons développé de nouveaux accès pour la construction de molécules comportant les motifs Csp3-CF3 et Csp3-SCF3. Deux réactions de transfert d'hydrure sur des composés trifluorométhylés par catalyse avec des métaux de transition ont été réalisées : 1) l'isomérisation catalytique d'alcools allyliques trifluorométhylés par des complexes de fer (II); 2) le transfert d'hydrogéne énantiosélectif de céto-imines trifluorométhylées par des complexes chiraux de ruthénium en utilisant l'isopropanol comme source d'hydrure pour obtenir des amines trifluorométhylées optiquement actives avec de hauts rendements et de hautes énantiosélectivités. La trifluorométhylthiolation allylique nucléophile de dérivés de Morita-Baylis-Hillman a été étudiée. L'accès régio- et stéréosélectif aux produits SCF3 thermodynamiques a été réalisé par la combinaison de S8/CF3SiMe3/KF/DMF avec de bons rendements. Le produit cinétique a été obtenu en utilisant le réactif de Zard. / We have developed new accesses for the construction of molecules featuring Csp3-CF3 and Csp3-SCF3 motifs. Two atom-economical hydride transfer reactions of trifluoromethylated compounds by transition-metal catalysis were realized: 1) the isomerization of trifluoromethylated allylic alcohols by iron (II) complexes; 2) the enantioselective transfer hydrogenation of trifluoromethylated ketimines by a chiral complex of ruthenium and isopropanol as hydride source for the preparation of optically pure trifluoromethylated amines in high yields and high enantioselectivities. The nucleophilic allylic trifluoromethylthiolation of Morita-Baylis-Hillman derivatives was investigated. The regio- and stereoselective access to thermodynamic trifluoromethylthiolated products has been achieved by combination of S8/KFfMe3SiCF3/DMF in good yields. The kinetic trifluoromethylthiolated products were obtained by using Zard's trifluoromethylthiolating reagent.

Zeolite catalysis plays an important role in many industrial applications due to their unique properties and has become widely used in the area of oil refining. Of particular interest is Zeolite Y, which can be hydrothermally treated into its ultrastable form, USY. USY offers a superior practicality, especially when dealuminated and metal-loaded. The importance of alkanes hydroisomerization arises from the continuingly stricter regulations imposed on the utilization of gasoline as an automotive fuel. The requirements to reduce the aromatics content in gasoline present a need to find an alternative way to maintain its research octane number (RON). An alternative to gasoline's high-octane aromatic content is to increase the RON for the paraffinic content of gasoline, which can be accomplished through hydroisomerization. Commercially, bifunctional metal-loaded zeolites are used to hydroisomerize the light naphtha stream produced at overheads of atmospheric distillation towers. However, no such process exists for the low-value heavy naphtha cut. This targeted process would, if successful, greatly improve refiner's profitability.In this work, bifunctional USY zeolite catalysts are studied in the hydroisomerization of a normal alkane (nC7, RON = 0). This nC7, found in heavy naphtha, has been used as the 'model' compound. The impact of different reaction conditions and catalyst properties on catalyst activity and stability, in addition to the catalyst selectivity to high octane isomers is one step towards determining optimum conditions and preferential catalyst formulations that favour octane maximization. Six platinum-loaded USY zeolite catalysts, four in-house and two commercial, were tested in an atmospheric glass fixed-bed reactor and a stainless steel reactor purpose-built during the course of this thesis. Reaction temperatures ranged from 170 to 250oC at pressures between 1 and 15 bar. The hydrogen to hydrocarbon molar ratio was fixed at 9, with feed space time ranging from 35.14 to 140.6 kg.s/mol. In-house catalysts were hydrothermally treated at different severities, while commercial ones were originally dealuminated through acid-leaching treatments.Results have shown commercial catalyst CBV-712 gave the best performance and highest octane values for product isomers (>30). In addition, there was no coke generation. The next best catalyst was the most severely steamed in-house catalyst (USY-D) that has shown a remarkable performance at high pressures, almost eclipsing the performance of CBV-712, yet produced higher levels of coke. Other USY catalysts tested were less robust during reactions, probably due to imbalance in their acidic to metallic functions, or diffusion limitations arising from their pore structures. The best catalysts were, nonetheless, highly sensitive to sulfur presence in the feed, which severely impacted their activity, especially their metallic functions, and thus require sulfur-free feeds in order to demonstrate their full capacities. Simple kinetic modelling of experimental data was performed using the initial rates method and estimation of kinetic parameters, whose values were in good agreement with previous literature.

The reaction of 1-(diphenylphosphino)-2-(diphenylphosphito)benzene (PP*) and Os3(CO)10(ACN) has been investigated. A combined experimental and computational study on the isomerization of 1,2-Os3(CO)10[μ-1,2-Ph2P(C6H4)P(OPh)2] (A) and 1,1-Os3(CO)10[μ-1,2-Ph2P(C6H4)P(OPh)2] (B) and reversible ortho-metalation exhibited by the triosmium cluster B are reported. The subsequent conversion of cluster B to the hydrido cluster HOs3(CO)9[μ-1,2-PhP(C6H4-η1)C6H4P(OPh)2] (E) and the benzyne-substituted cluster HOs3(CO)8(µ3-C6H4)[μ-1,2-PhP(C6H4)P(OPh)2] (N) has been established. All of these new clusters have been isolated and fully characterized in solution by IR and NMR spectroscopy; in addition, X-ray diffraction analyses have been performed on the clusters A, B, J, and N. The ortho-metalation reaction that gives cluster E is shown to be reversible, and the mechanism has been probed using selectively deuterated PP* isotopomers. Kinetic and thermodynamic isotope data, in conjunction with DFT calculations, are presented that support the existence of an intermediate unsaturated cluster in the ortho-metalation reaction. Due to interest in the coordination chemistry of formamidines, the non-symmetric amidine ligands PhNC(Me)NHPri, PhNC(Et)NHPri, and (2,4,6-Me3C6H2)NC(Me)NHPri, have been synthesized, and their reaction with Os3(CO)10(MeCN)2 has been investigated. Of the twelve new clusters prepared in section, seven have been structurally characterized by X-ray crystallography.

Complexes with pincer ligand moieties have garnered much attention in the past few decades. They have been shown to be highly active catalysts in several known transition metal-catalyzed organic reactions as well as some unprecedented organic transformations. At the same time, the use of computational organometallic chemistry to aid in the understanding of the mechanisms in organometallic catalysis for the development of improved catalysts is on the rise. While it was common in earlier studies to reduce computational cost by truncating donor group substituents on complexes such as tertbutyl or isopropyl groups to hydrogen or methyl groups, recent advancements in the processing capabilities of computer clusters and codes have streamlined the time required for calculations. As the full modeling of complexes become increasingly popular, a commonly overlooked aspect, especially in the case of complexes bearing isopropyl substituents, is the conformational analysis of complexes. Isopropyl groups generate a different conformer with each 120 ° rotation (rotamer), and it has been found that each rotamer typically resides in its own potential energy well in density functional theory studies. As a result, it can be challenging to select the most appropriate structure for a theoretical study, as the adjustment of isopropyl substituents from a higher-energy rotamer to the lowest-energy rotamer usually does not occur during structure optimization. In this report, the influence of the arrangement of isopropyl substituents in pincer complexes on calculated complex structure energies as well as a case study on the mechanism of the isomerization of an iPrPCP-Fe complex is covered. It was found that as many as 324 rotamers can be generated for a single complex, as in the case of an iPrPCP-Ni formato complex, with the energy difference between the global minimum and the highest local minimum being as large as 16.5 kcalmol-1. In the isomerization of a iPrPCP-Fe complex, it was found that the isopropyl substituents not only influence the calculated structure energies, but they dictate the mechanism of isomerization with the rotation of isopropyl substituents from the arrangement in the starting material complex to the arrangement in the product complex being the rate-determining step.

Becke's three-parameter hybrid density functional method in conjunction with Lee-Yang-Parr's correlation functional (B3LYP) was used to investigate the pyrolysis mechanisms of indole yielding benzyl cyanide and o- and m- tolunitriles. All equilibrium and transition state structures of the proposed reaction channels were fully optimized by B3LYP using the 6-31G** basis set. Single point energies were evaluated by B3LYP with the 6-311 + + G(2d,2p) basis set. Two hydrogen migration tautomers of indole, seemingly playing no important roles in the pyrolysis due to destruction of aromaticity of the benzene ring, were predicted to be easily accessible under the experimental conditions and may be important intermediates in the reactions. Two other transition states suggested to play important roles in the experimental study were not found and may not exist. Instead stepwise processes via hydrogen migration tautomers arriving at the same products are shown likely to be responsible for the observed products. IR spectral features of three hydrogen-migration tautomers are predicted to help future experimental identification.

京都大学 / 0048 / 新制・課程博士 / 博士(農学) / 甲第19754号 / 農博第2150号 / 新制||農||1038(附属図書館) / 学位論文||H28||N4970(農学部図書室) / 32790 / 京都大学大学院農学研究科食品生物科学専攻 / (主査)教授 安達 修二, 教授 入江 一浩, 教授 保川 清 / 学位規則第4条第1項該当 / Doctor of Agricultural Science / Kyoto University / DFAM

京都大学 / 0048 / 新制・論文博士 / 博士(農学) / 乙第13074号 / 論農博第2844号 / 新制||農||1046(附属図書館) / 学位論文||H29||N5030(農学部図書室) / 33225 / (主査)教授 安達 修二, 教授 谷 史人, 教授 橋本 渉 / 学位規則第4条第2項該当 / Doctor of Agricultural Science / Kyoto University / DFAM

<p> The effect of a C-7 substituent on the position of the cycloheptatriene/ norcaradiene equilibrium has been investigated. For this purpose a series of monosubstituted cycloheptatrienes was prepared in which the C-7 substituent was a carbonium ion grouping. From the spectral properties of these systems, it has been concluded that proportion of the norcaradiene valence tautomer present increases as the electron withdrawing ability of the carbonium ion substituent is enhanced.</p> <p> From a comparison of the pmr spectra of 7-norcaradienylmethyl cations with suitable model systems it is suggested that these norcaradienes are aromatic and that they support an induced diamagnetic ring current when in a magnetic field. It would appear that this type of cyclic delocalization is enhanced by the presence of an electron defficient substituent at C-7 of a norcaradiene and possible reasons for this are discussed.</p> <p> The 7-norcaradienylmethyl cations underwent a thermal isomerization to give benzenoid materials at relatively low temperatures. A mechanism for this rearrangement has been proposed and the implication of these results to the general pathways involved in the rearrangements of the C8H9+ family of cations discussed.</p> <p> Several synthetic routes to 9-substituted-3,4-homotropylidenes were investigated. A number of new compounds were isolated and a new synthetic approach to this class of compounds is suggested.</p> <p> Diamagnetic susceptibility exaltations of a series of substituted cycloheptatrienes were determined and used as a criterion of aromaticity. It was concluded that cycloheptatrienes are best regarded as homoaromatic molecules. Moreover it would appear that the substantial diamagnetic susceptibility exaltations observed with these compounds are related to the bulk of a C-7 substituent. One neutral norcaradiene was examined by this technique and was found to be nonaromatic.</p> / Thesis / Doctor of Philosophy (PhD)