Epidermolysis bullosa simplex (EBS) and epidermolytic ichthyosis (EI) are rare skin fragility diseases characterized by intra-epidermal blistering due to autosomal dominant-negative mutations in basal (KRT5 or KRT14) and suprabasal (KRT1 or KRT10) keratin genes,  respectively. Despite vast knowledge in the disease pathogenesis, the pathomechanisms are not fully understood, and no effective remedies exist. The purpose of this work was to search for keratin gene mutations in EBS patients, to develop in vitro models for studying EBS and EI, and to investigate novel pharmacological approaches for both diseases. We identified both novel and recurrent KRT5 mutations in all studied EBS patients but one which did not show any pathogenic keratin mutations. Using cultured primary keratinocytes from EBS patients, we reproduced a correlation between clinical severity and cytoskeletal instability in vitro. Immortalized keratinocyte cell lines were established from three EBS and three EI patients with different phenotypes using HPV16-E6E7. Only cell lines derived from severely affected patients exhibited spontaneous keratin aggregates under normal culture conditions. However, heat stress significantly induced keratin aggregates in all patient cell lines. This effect was more dramatic in cells from patients with a severe phenotype. In organotypic cultures, the immortalized cells were able to differentiate and form a multilayered epidermis reminiscent of those observed in vivo. Addition of two molecular chaperones, trimethylamine N-oxide dihydrate (TMAO) and sodium 4-phenylbutyrate (4-PBA), reduced the keratin aggregates in both stressed and unstressed EBS and EI keratinocytes, respectively. The mechanism of action of TMAO and 4-PBA was shown to involve the endogenous chaperone system (Heat shock proteins e.g. Hsp70). Besides, MAPK signaling pathways also seemed to be incriminated in the pathogenesis of EBS. Furthermore, depending on which type of keratin is mutated, 4-PBA up-regulated Hsp70 and KRT4 (possibly compensating for mutated KRT1/5), and down-regulated KRT1 and KRT10, which could further assist in protecting EBS and EI cells against stress. In conclusion, novel and recurrent pathogenic keratin mutations have been identified in EBS. Immortalized EBS and EI cell lines that functionally reflect the disease phenotype were established. Two pharmacologic agents, TMAO and 4-PBA, were shown to be promising candidates as novel treatment of heritable keratinopathies in this in vitro model.

Objective: We aimed to assess the prognostic value of circulating tumor cells (CTC) in patients with advanced gastric and gastroesophageal adenocarcinomas. Methods: The presence of CTC was evaluated in 62 patients with advanced gastric and gastroesophageal adenocarcinomas before systemic therapy and at follow-up through immunomagnetic enrichment for mucin 1- and epithelial cell adhesion molecule (EpCAM)-positive cells, followed by real-time RT-PCR of the tumor-associated genes KRT19 , MUC1 , EPCAM , CEACAM5 and BIRC5 . Results: The patients were stratified into groups according to CTC detection (CTC negative: with all marker genes negative; CTC positive: with at least 1 of the marker genes positive). Patients who were CTC positive at baseline had a significantly shorter median progression-free survival (PFS; 3.5 months, 95% CI: 2.9–4.2) and overall survival (OS; 5.8 months, 95% CI: 4.5–7.0) than patients lacking CTC (PFS 10.7 months, 95% CI: 6.9–14.4, p < 0.001; OS 13.3 months, 95% CI: 8.0–18.6, p = 0.003). Alterations in the marker profile during the course of chemotherapy were not predictive of clinical outcome or response to therapy. Yet, a favorable clinical response depended significantly on CTC negativity (p = 0.03). Conclusion: Our data suggest that the presence of CTC is a major predictor of outcome in patients with gastric and gastroesophageal malignancies.

No / Despite being widely utilized in the production of cultural objects, keratinous hard tissues, such as horn, baleen, and tortoiseshell, rarely survive in archaeological contexts unless factors combine to inhibit biodeterioration. Even when these materials do survive, working, use, and diagenetic changes combine to make identification difficult. This paper reviews the chemistry and deterioration of keratin and past approaches to the identification of keratinous archaeological remains. It describes the formation of horn, hoof, baleen, and tortoiseshell and demonstrates how identification can be achieved by combining visual observation under low-power magnification with an understanding of the structure and characteristic deterioration of these materials. It also demonstrates how peptide mass fingerprinting of the keratin can be used to identify keratinous tissues, often to species, even when recognizable structural information has not survived.

Queratinócitos são um veículo bastante atrativo para a transferência gênica ex vivo e liberação sistêmica uma vez que as proteínas secretadas por estas células podem atingir a circulação via um mecanismo similar ao processo natural. Um eficiente vetor retroviral (LXSN) contendo o gene do hormônio de crescimento de camundongo (mGH) foi utilizado para transduzir queratinócitos humanos primários. Os queratinócitos transduzidos apresentaram um nível de secreção in vitro alto e estável atingindo até 11 g mGH/106 células/dia. Os epitélios formados por estes queratinócitos geneticamente modificados apresentaram, porém, uma queda na taxa de secreção > 80 % quando foram retirados da placa de cultura utilizando um procedimento clássico. A substituição desta metodologia clássica por uma cultura organotípica resolveu completamente este problema. Camundongos anões imunodeficientes (lit/scid) implantados com estes enxertos organotípicos foram acompanhados durante 4 meses, e apresentaram um aumento de peso significativo (P<0,05) nos primeiros 40 dias. Níveis circulatórios de mGH atingiram um pico de 21 ng/mL 1 h após o implante, mas estes níveis rapidamente atingiram níveis basais (~2 ng/mL). Os queratinócitos humanos primários apresentaram portanto altos níveis de expressão in vitro e os maiores níveis circulatórios, porém por um breve período de tempo, reportados até o momento para GH neste tipo de células. Em conjunto com resultados que mostraram uma recuperação considerável da eficiência de secreção de mGH em cultura por enxertos organotípicos retirados dos animais, foram discutidos os fatores que ainda impedem a utilização clínica deste modelo promissor de terapia gênica cutânea. / Keratinocytes are a very attractive vehicle for ex vivo gene transfer and systemic delivery, since proteins secreted by these cells may reach the circulation via a mechanism which mimics the natural process. An efficient retroviral vector (LXSN) encoding the mouse growth hormone gene (mGH) was used to transduce primary human keratinocytes. Organotypic raft cultures were prepared with these genetically modified keratinocytes and were grafted onto immunodeficient dwarf mice (lit/scid). Transduced keratinocytes presented a high and stable in vitro secretion level of up to 11 g mGH/106cells/day. Conventional epidermal sheets made with these genetically modified keratinocytes, however, showed a drop in secretion rates of > 80% simply due to detachment of the epithelium from its substratum. Substitution of conventional grafting methodologies with organotypic raft cultures completely overcame this problem. The stable long-term grafting of such cultures onto immunodeficient dwarf (lit/scid) mice could be followed for more than 4 months, and a significant weight increase (P<0.05) over the control group was observed in the first 40 days. Circulating mGH levels revealed a peak of 21 ng/mL just 1h after grafting, but unfortunately these levels rapidly fell to baseline values (~ 2 ng/mL). mGH-secreting primary human keratinocytes presented the highest in vitro expression and peak circulatory levels reported to date for a form of GH with this type of cells. Together with data showing that excised implants can recover in culture a remarkable fraction of their original in vitro mGH secretion efficiency, the factors that might still hamper the success of this promising model of cutaneous gene therapy are discussed. SUMÁRIO

Chicken feathers are the most abundant keratinous biomass in the world. Disposal of thehuge and increasing volume of waste feathers presents as a major concern for poultryindustry. On the other hand, energy and material recovery of this valuable protein sourceis an important issue for organic solid waste treatment and bioenergy generation.Anaerobic digestion is an environmentally and economically promising alternativeprocess for biogas production of waste feathers.In this study in order to enhance the methane potential of batch anaerobic digestion ofchicken feathers this waste was treated by various kinds of pretreatments includingthermal, thermo-chemical, enzymatic, thermo-enzymatic and chemo-enzymatic methods.Also the effect of different treatment conditions on the methane yield was investigated.As a whole, thermo-chemical pretreatment with lime (Ca(OH)2) rendered the mostsignificant effect on enhancement of the chicken feathers methane potential. In particularlime treated triplicate samples under treatment condition of 40g TS feather/l water, 0.1gCa (OH)2 /g TS feather, 100°C and 30 min produced the highest amount of methane (anaverage maximum volume of 480 Nml/g VS, which is about 96.8% of the theoreticalmethane potential of protein), during 50 days of anaerobic incubation. Increasing theoperational parameters such as feather concentration, lime loading, temperature andreaction time improved the feathers solublisation resulting in a higher soluble chemicaloxygen demand (SCOD) concentration of the samples but inserted negative impacts onthe anaerobic digestion performance. Although other pretreatment methods improved theSCOD concentrations of the feathers too, compared to the lime treatment those methodsdidn’t show considerable effects on the enhancement of methane yield from the chickenfeathers. Thermo-enzymatic, enzymatic, and thermal pretreated triplicate samplesproduced an average maximum of 185 Nml/g VS, 154 Nml/g VS, and 143 Nml/g VS(37.3%, 31%, 28.8% of the theoretical methane potential) respectively, during 33 days of50 days of anaerobic incubation. Especially, chemo-enzymatic pretreated sample showednegative methane potential of only 41 Nml/g VS, i.e. 8% of the theoretical methanepotential. Consequently, lime pretreatment under the above recommended conditions canbe suggested for hydrolysis of chicken feathers to achieve significant enhancement of itsmethane potential.

Queratinócitos são um veículo bastante atrativo para a transferência gênica ex vivo e liberação sistêmica uma vez que as proteínas secretadas por estas células podem atingir a circulação via um mecanismo similar ao processo natural. Um eficiente vetor retroviral (LXSN) contendo o gene do hormônio de crescimento de camundongo (mGH) foi utilizado para transduzir queratinócitos humanos primários. Os queratinócitos transduzidos apresentaram um nível de secreção in vitro alto e estável atingindo até 11 g mGH/106 células/dia. Os epitélios formados por estes queratinócitos geneticamente modificados apresentaram, porém, uma queda na taxa de secreção > 80 % quando foram retirados da placa de cultura utilizando um procedimento clássico. A substituição desta metodologia clássica por uma cultura organotípica resolveu completamente este problema. Camundongos anões imunodeficientes (lit/scid) implantados com estes enxertos organotípicos foram acompanhados durante 4 meses, e apresentaram um aumento de peso significativo (P<0,05) nos primeiros 40 dias. Níveis circulatórios de mGH atingiram um pico de 21 ng/mL 1 h após o implante, mas estes níveis rapidamente atingiram níveis basais (~2 ng/mL). Os queratinócitos humanos primários apresentaram portanto altos níveis de expressão in vitro e os maiores níveis circulatórios, porém por um breve período de tempo, reportados até o momento para GH neste tipo de células. Em conjunto com resultados que mostraram uma recuperação considerável da eficiência de secreção de mGH em cultura por enxertos organotípicos retirados dos animais, foram discutidos os fatores que ainda impedem a utilização clínica deste modelo promissor de terapia gênica cutânea. / Keratinocytes are a very attractive vehicle for ex vivo gene transfer and systemic delivery, since proteins secreted by these cells may reach the circulation via a mechanism which mimics the natural process. An efficient retroviral vector (LXSN) encoding the mouse growth hormone gene (mGH) was used to transduce primary human keratinocytes. Organotypic raft cultures were prepared with these genetically modified keratinocytes and were grafted onto immunodeficient dwarf mice (lit/scid). Transduced keratinocytes presented a high and stable in vitro secretion level of up to 11 g mGH/106cells/day. Conventional epidermal sheets made with these genetically modified keratinocytes, however, showed a drop in secretion rates of > 80% simply due to detachment of the epithelium from its substratum. Substitution of conventional grafting methodologies with organotypic raft cultures completely overcame this problem. The stable long-term grafting of such cultures onto immunodeficient dwarf (lit/scid) mice could be followed for more than 4 months, and a significant weight increase (P<0.05) over the control group was observed in the first 40 days. Circulating mGH levels revealed a peak of 21 ng/mL just 1h after grafting, but unfortunately these levels rapidly fell to baseline values (~ 2 ng/mL). mGH-secreting primary human keratinocytes presented the highest in vitro expression and peak circulatory levels reported to date for a form of GH with this type of cells. Together with data showing that excised implants can recover in culture a remarkable fraction of their original in vitro mGH secretion efficiency, the factors that might still hamper the success of this promising model of cutaneous gene therapy are discussed. SUMÁRIO

The hair shaft has increasing importance in bioarchaeology, since it is now possible to retrieve detailed biomolecular information on recent life history using individual fibres (e.g., on diet, drug use and DNA). Data on hair condition is an important cornerstone to ensuring that reliable information is obtained. The following study defines morphological features of degradative change in human terminal scalp hair using different microscopy techniques. Evidence of degradative change is translated into a ranked histology for assessing hair sample condition. The approach is applied to samples of cut modern scalp hair subjected to degradation under soil burial/simulated grave conditions.

Made available in DSpace on 2014-10-09T12:38:22Z (GMT). No. of bitstreams: 0 / Made available in DSpace on 2014-10-09T14:05:27Z (GMT). No. of bitstreams: 1 05680.pdf: 8681194 bytes, checksum: c738dd10c1a17a2b018e74273b788729 (MD5) / Tese (Doutoramento) / IPEN/T / Instituto de Pesquisas Energeticas e Nucleares - IPEN/CNEN-SP

Made available in DSpace on 2014-10-09T12:49:03Z (GMT). No. of bitstreams: 0 / Made available in DSpace on 2014-10-09T14:09:49Z (GMT). No. of bitstreams: 0 / Tese (Doutoramento) / IPEN/T / Instituto de Pesquisas Energeticas e Nucleares - IPEN/CNEN-SP

Made available in DSpace on 2014-10-09T12:38:22Z (GMT). No. of bitstreams: 0 / Made available in DSpace on 2014-10-09T14:05:27Z (GMT). No. of bitstreams: 1 05680.pdf: 8681194 bytes, checksum: c738dd10c1a17a2b018e74273b788729 (MD5) / Tese (Doutoramento) / IPEN/T / Instituto de Pesquisas Energeticas e Nucleares - IPEN/CNEN-SP