Lake whitefish (Coregonus clupeaformis) are an ecologically, culturally and economically important species throughout the Great Lakes. Studying the larval period of ontogeny is important to increasing knowledge of population dynamics and monitoring ecological changes in lake whitefish populations. Larval lake whitefish have been studied across the Great Lakes since the 1930’s; however, there are major gaps in our understanding of the factors that affect distribution and abundance of larval lake whitefish. The goal of this study was to investigate the distribution and abundance of larval lake whitefish in a Great Lakes embayment, using Stokes Bay, Lake Huron as a case study. Plankton samples and environmental data were collected from mid-spring to early summer during 2011 and 2012. Plankton tows in 2011 (n=71, 21 April-03 June) revealed relatively high densities of larval lake whitefish as compared to other Great Lakes studies. Overall there was little relationship between environmental variables (temperature, dissolved oxygen, conductivity, depth) and larval lake whitefish distribution and abundance. Plankton tows in 2012 (n=25, 25 April-23 May) revealed a virtual absence of larval lake whitefish in Stokes Bay. The apparent 2012 year-class failure was concurrent with unseasonably warm temperatures and reduced ice coverage. Temperature-related hypotheses are evaluated in context with other possible explanations of a general year-class failure of lake whitefish during early life history. / Saugeen Ojibway Nation (SON)

<p>Offshore spring zooplankton biomass in northern Lake Michigan is currently dominated by calanoid copepods and lacking in cyclopoid copepod biomass, which is a preferred prey type for larval coregonids in the Great Lakes. As such, we survey nearshore beach zooplankton to determine if nearshore environments are following offshore trends and describe larval coregonid diets and prey selectivity during spring 2015-2019. Copepod nauplii and calanoid copepods were the most abundant prey types in the nearshore beach environments, and although larvae did not consume copepod nauplii, larvae did incorporate substantial later life stages of calanoid copepods into their diet. Additionally, larvae exhibited positive selectivity for both calanoid and cyclopoid copepods. High consumption of and selectivity for calanoid copepods in small larval coregonids is not a common observation in the Great Lakes, as previous diets of small larvae have been comprised of mainly cyclopoid copepods and cladocerans. Future research into the foraging costs and nutritional benefits of larval diets with differing ratios of cyclopoid to calanoid biomass should be investigated to understand the potential impacts of differing diets on larval growth and survival. </p> <p> Many species of larval fish in Lakes Michigan and Huron experience a prolonged offshore pelagic stage as during early life, but environmental conditions in offshore environments have changed in the past quarter century. Under current conditions, offshore habitats may be unsuitable for larval fish, given recent increases in offshore water clarity and decreases in offshore primary production and zooplankton biomass in both lakes. To evaluate habitat suitability for larval fish, we characterized ambient environmental conditions using data streams from multiple high frequency sensors to develop growth rate potential models as an index of habitat quality of nearshore-offshore transects in central Lake Michigan and southern Lake Huron. Since temperature regimes differ throughout the summer, we compare habitat quality throughout the summer for larval yellow perch and smelt, two species that have demonstrated offshore pelagic stages as larvae. Early in the summer, high habitat quality was concentrated nearshore, while later in the summer high habitat quality was concentrated near the thermocline, at depths where larvae are unlikely to inhabit due to limited swimming ability. The offshore (15-60 m depth contour) surface waters of both lakes provide poor habitat quality in May and July, although the surface waters of transects collected during June in southern Lake Huron provided high quality habitat at all distances from shore. These results suggest that offshore advection and prolonged offshore pelagic stage duration during early life of fish could contribute to decreased growth and survival of larval fish in lakes Michigan and Huron. </p>

Tidal freshwater wetlands provide valuable ecosystem services such as nutrient cycling, coastal flood control, and reproductive habitat for early life stages of economically and ecologically important fishes. The nutrient rich environments that tidal freshwater wetlands occur in support high levels of primary productivity of phytoplankton and vegetation that provide essential reproductive habitat for anadromous clupeid fishes (Alosa spp., Brevoortia tyrannus) in Chesapeake Bay tributaries. Seasonal retention of clupeid eggs and larvae within tidal freshwater habitats may enhance early growth, survival, and year class strength. The primary goal of the present study was to characterize the relative importance of tidal freshwater wetlands to the early life history stages of anadromous, migratory, and resident clupeid fishes in the lower James River. From 2014-2018, conical tow nets were used to collect ichthyoplankton samples from representative locations within the tidal freshwater marsh-creek complex of Curles Neck Creek, Virginia during the period of February through May. Boat electrofishing was used to sample juvenile target clupeids within the marsh-creek complex during March through November 2014-2018. A strong positive correlation between larval and juvenile Blueback Herring and Atlantic Menhaden, supported the hypothesis of seasonal in-system retention. This was the first published study to describe spatial and temporal patterns of occurrence of clupeid fishes with varying life history strategies in a tidal freshwater marsh and highlighted the importance of tidal freshwater marshes as nursery habitat.

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Analysis of larval fish collected at four stations in a 330-ha cooling reservoir indicated Dorosoma spp. were most numerous at all stations, followed by Lepomis spp. and Percina Macrolepida. Largest numbers and greatest diversity of larval fish were found at the station least affected by thermal effluent; the mid-lake station provided the smallest numbers and least diversity. The two warmwater stations were intermediate, with similar numbers and diversity. Diversity and abundance of zooplankton between stations were similar to those of fish. The most abundant zooplankter (Bosmina) was generally selected against by Dorosoma, Lepomis and Micropterus spp. larvae except when the larvae were quite small ((10mm). Cyclopoid copepods were most often selected by all larvae.

For marine fishes, the early larval phase is considered a critical stage for survivorship and recruitment. The spatial and temporal dynamics of larval fish assemblages can influence their success and trophic structure of marine communities and entire ecosystems. This thesis will provide the first characterization of larval fish assemblage in the Strait of Georgia (SoG) in terms of diversity, abundance and composition, and their variability over multiple temporal scales, as well as the first quantification of variability in larval fish distribution in the SoG across multiple spatial scales. On the interdecadal scale, a significant decrease in larval abundance of several dominant fish taxa (Pacific hake, walleye Pollock, northern smoothtongue and rockfishes) contributed to a decline in total larval abundance and turnover in the composition structure between the early 1980s and the late 2000s. In contrast, both abundance and the relative composition of flatfishes and several demersal forage fish taxa increased during the same period. On interannual scales, abundance, diversity and community structure of the spring larval assemblages varied dramatically through 2007-2010, a period which alternated between strong La Niña and El Niño events. Higher overall larval concentrations were associated with warm conditions in the SoG in 2007 and 2010, while the lowest larval concentration was associated with cooler condition in 2009. Examination of associations between larval fish assemblages and environmental fluctuations suggests a potential influence of large-scale climate processes between the early 1980s and the late 2000s, but a primary association with local environmental factors on interannual scales. Spatial patterns in larval density of three dominant fish taxa (Pacific herring, Pacific hake and northern smoothtongue) were mostly structured on predefined broad (> 40km) and medium (20~40km) scales. Although their scale-dependent associations with environmental factors varied interannually, larval distributions in the central-southern SoG were generally associated with salinity, temperature and vertical stability of water column in the upper layer (0-50m). Our results emphasize the role of local estuarine circulation in structuring hierarchical spatial distributions of planktonic fish larvae in the SoG. These findings will provide considerable implications in fisheries resource management and conservation strategies. / Graduate / 0416 / 0329 / guanlu129@gmail.com

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It is increasingly recognized that individuals of the same species differ from each other and influence and respond to their environment in unique ways. This thesis deals with size variation among individuals that not only are of the same species but also of similar age. Such variation may develop even when individuals are born in the same environment, i.e. within a cohort. I have studied the sources and consequences of variation within and among cohorts from egg through early ontogeny using young-of-the-year (YOY) perch (Perca fluviatilis) as study organism. In agreement with predictions based on model results only taking exploitative interactions among individuals into account, I found that the broader the initial size distributions were, the more did the degree of size variation among individuals decrease over time. Still, with initially small size variation among individuals, in several experiments also size divergence was observed. Furthermore, size variation among individuals increased more under high compared to at low densities. Increased size variation over time may be explained by size-dependent diet shifts allowing for initially larger individuals to make an early diet shift when the first resource becomes limiting. However, as size divergence also was observed in situations with only shared resources available, it can be concluded that diet shifts are not a prerequisite for size divergence in young animal cohorts. Hence, I also suggest that mechanisms not related to competition for limiting resources, such as genetic variation, stochasticity and behavioural traits must be taken into account, especially when initial size differences are small. The importance of considering size variation among individuals within cohorts was demonstrated in a study of winter mortality in YOY perch cohorts. A large individual size in autumn was shown to increase overwinter survival within cohorts. However, late summer growth rather than average body size reached in autumn explained variation in overwinter survival between cohorts. Higher accumulation to lipid reserves and accordingly lower mortality over winter was observed in years with high growth rates late in the season. In another study I showed that apparent patterns of density-dependent growth can emerge among larval fish, but rather than a result of density-dependent resource limitation this was due to variation in size-selective predation pressure. Individuals in the right end of the size distributions grew in to a high predation pressure from cannibalistic perch when cannibal density was high, coinciding with high larval perch densities. Finally, as substantial size variation among individuals can develop within cohorts, also intra-cohort cannibalism can occur. Using a physiologically structured population model it was shown that the development of size bimodality within cohorts as a result of intra-cohort cannibalism is critically dependent on long hatching periods, high victim densities and density-dependent feedbacks on shared resources. / Det faktum att individer som tillhör samma art skiljer sig från varandra och påverkar och påverkas av sin omgivande miljö på ett unikt sätt tillskrivs allt större betydelse inom ekologin. Den här avhandlingen handlar framför allt om storleksvariation mellan individer som förutom att tillhöra samma art dessutom tillhör samma årsklass. Sådan storleksvariation kan till och med utvecklas mellan individer som föds och växer upp i samma miljö (inom en kohort). Jag har studerat orsaker bakom och konsekvenser av variation inom och mellan kohorter. Som studieorganism har jag använt mig av årsyngel av abborre (Perca fluviatilis). I överensstämmelse med förutsägelser baserade på en modell som enbart tar hänsyn till konkurrens om en gemensam resurs visade det sig såväl i ett dammexperiment som i en naturlig sjö att ju bredare den initiala storleksfördelningen var desto mer minskade graden av variation i kroppsstorlek mellan individer över tid. Å andra sidan, när den initiala variationen var relativt liten observerades i flera oberoende experiment även storleksdivergens över tid mellan individer. Variationen i storlek ökade särskilt i miljöer med höga tätheter av konsumenter (abborrar). För att förstå de bakomliggande mekanismerna av sådana täthetseffekter måste man ta hänsyn till den återkoppling som sker mellan antalet konsumenter och mängden resurser. Ökad storleksvariation över tid skulle kunna förklaras med storleksberoende dietskiften som tillåter individer med en initial storleksfördel att genomgå ett tidigt dietskifte samtidigt som tillgången av den första resursen begränsar övriga individers tillväxt. Eftersom storleksdivergens även observerades i situationer där enbart en delad resurs var tillgänglig kan man dock dra slutsatsen att dietskiften inte är en förutsättning för storleksdivergens inom kohorter. Jag föreslår därför också att mekanismer som inte är relaterade till konkurrens om en begränsad resurs, såsom inneboende variation mellan individer och variation i beteendemönster bör beaktas för att förklara uppkomsten av storleksvariation, speciellt i de fall då den initiala variationen är liten. De resultat som presenteras visar på betydelsen av att ta hänsyn till storleksvariation mellan individer. Storlek efter den första tillväxtsäsongen var viktig för att förklara vilka individer inom en kohort av årsyngel som överlever sin första vinter. För att förklara variation i vinteröverlevnad mellan kohorter (mellan år och sjöar) var däremot hög tillväxt sent på säsongen (oberoende av medelstorlek på hösten) avgörande. Högre ackumulering av fettreserver och lägre mortalitet inom kohorter av årsyngel under vintern observerades under år med hög tillväxt under den senare delen av tillväxtsäsongen. I en annan studie visade jag att mönster som tyder på täthetsberoende tillväxt kan uppkomma hos fiskyngel men att detta fenomen snarare än täthetsberoende resursbegränsning förklaras av variation i storleksberoende predationstryck. De större individerna inom kohorterna växte in i ett högt predationstryck från kannibalistiska abborrar när tätheten av kannibaler var hög, något som samkorrelerade med höga tätheter av yngel. Slutligen, då en hög grad av storleksvariation mellan individer kan utvecklas inom kohorter är även kannibalism mellan individer inom en kohort möjligt. Genom att använda mig av en så kallad fysiologiskt strukturerad populationsmodell kunde jag visa att divergerande tillväxtkurvor mellan kannibaler och deras byten (vilket resulterar i storleksbimodalitet) som ett resultat av kannibalism inom kohorter är beroende av den tid det tar för ynglen att kläcka ut, antalet bytesfiskar per kannibal samt den återkoppling som finns mellan konsumenterna och deras gemensamma resurs (djurplankton).