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Hepatic steatosis is common in the general population and is present in 13.25% of donor organs. It can affect graft survival and recovery of the donor after partial hepatectomy. Liver biopsy is the standard method to measure the degree of hepatic steatosis, but it¡¦s also an invasive procedure and may have sampling error. Non-invasive tools, such as computed tomography and magnetic resonance image, are generally utilized and developed. This study was designed to build a standard model for the quantification of the fat content in a fat-water mixed phantom model. Pork fat and pure water were mixed in different ratios by volume (from 0% fraction of fat to 100% fat in steps of 5%), and then measured for fat content in different concentrations of fat-water mixed phantom by using (1) CT number (Hounsfield unit; HU), (2) Dixon method (in-phase & opposed-phase), and (3) 1H spectroscopy (SVS30 & SVS136, without water suppression). The CT number decreased with increasing fat concentration. The Hounsfield units of pure fat were about -122 HU. At Dixon method, the fat image intensity increased to its maximum when the fat concentration reached 25% and then decreased. Fat concentration higher than 25% and lower than 25% both had the same value of the fat image intensity. Combined with SVS30 water/fat peak height ratio, the fat concentration could be estimated. Furthermore, the fat image could be utilized to observe the topographic distribution of hepatic steatosis. Then a rat fatty liver model fed with a choline deficient and iron supplemented L-amino acid defined (CDAA) diet was established. Fatty liver grade was evaluated by radiological and biochemical assessments. CT and MRS technique displayed the highest fat contents the same with histological examination in CDAA diet rats at 6 weeks. The results showed that MRS was a suitable method for quantifying fat to water concentration. As a result of this study, model of measurement scale can be established to measure fat concentration both in phanatoms and animal. Further study in human fatty liver was expected.

The presented thesis deals with the use of MR spectroscopy methods for the study of heart metabolism, namely the determination of the lipid content in the heart tissue. The aim of the thesis was the optimization of the examination protocol for the use in the routine examination of patients. The heart examination by means of MR spectroscopy is due to movements caused by the heart rhythm and breathing very challenging. We have, therefore, proposed the measurement protocol, when the measurement is controlled both by ECG signal and the signal monitoring breathing of the examined subject. To achieve sufficient quality of MR spectra we also proposed the use of an advanced method (GREshim) for the adjustment of the homogeneity of the static magnetic field. Using the optimized examination protocol we have examined a group of 14 healthy volunteers. An average content of lipids in the myocardium equal to 0,7 % as determined from the performed measurements is in agreement with published data.

Thesis advisor: Michael Graf / The purpose of this dissertation was to investigate the temporal limit on the ability to measure temperature changes using magnetic resonance imaging (MRI). The limit was examined in experiments using a variety of imaging techniques for MRI-based temperature measurements. We applied these methods for monitoring temperature changes in focused ultrasound (FUS) heating experiments. FUS is an attractive alternative to surgical resection due to its noninvasive character. FUS treatments have been successfully conducted in several clinical applications. MRI and MR thermometry is a natural choice for the guidance of FUS surgeries, given its ability to visualize, monitor, and evaluate the success of treatments. MR thermometry, however, can be a very challenging application, as good resolution is often needed along spatial, temporal as well as temperature axes. These three quantities are strictly related to each other, and normally it is theoretically impossible to simultaneously achieve high resolutions for all axes. In this dissertation, techniques were developed to achieve this at cost of some reduction in spatial coverage. Given that the heated foci produced during thermal therapies are typically much smaller than the anatomy being imaged, much of the imaged field-of-view is not actually being heated and may not require temperature monitoring. By sacrificing some of the in-plane spatial coverage outside the region-of-interest (ROI), significant gains can be obtained in terms of temporal resolution. In the extreme, an ROI can be chosen to be a narrow pencil-like column, and a sampling time for temperature imaging is possible with a temporal resolution of a few milliseconds. MRI-based thermal imaging, which maps temperature-induced changes in the proton resonance frequency, was implemented in two projects. In the first project, three previously described, fast MR imaging techniques were combined in a hybrid method to significantly speed up acquisition compared to the conventional thermometry. Acceleration factors up to 24-fold were obtained, and a temporal resolution as high as 320 milliseconds was achieved. The method was tested in a gel phantom and in bovine muscle samples in FUS heating experiments. The robustness of the hybrid method with respect to the cancellation of the fat signal, which causes temperature errors, and the incorporation of the method into an ultrafast, three dimensional sequence were also investigated. In the second project, a novel MR spectroscopic sequence was investigated for ultrafast one-dimension thermometry. Temperature monitoring was examined during FUS sonications in a gel phantom, SNR performance was evaluated in vivo in a rabbit brain, and feasibility was tested in a human heart. It was shown capable in a FUS heating experiment in a gel phantom of increasing temporal resolution to as high as 53 milliseconds in a three Tesla MRI. The temporal resolution achieved is an order of magnitude faster than any other rapid MR thermometry sequences reported. With this one-dimensional approach, a short sampling time as low as 3.6 milliseconds was theoretically achievable. However, given the SNR that could be achieved and the limited heating induced by FUS in the gel phantom in a few milliseconds, any temperature changes in such a short period were obscured by noise. We have analyzed the conditions whereby a temporal resolution of a few-milliseconds could be obtained. / Thesis (PhD) — Boston College, 2011. / Submitted to: Boston College. Graduate School of Arts and Sciences. / Discipline: Physics.

This thesis deals with in vivo MR spectroscopy. Measurements in this thesis were performed on whole-body MR tomograph at the Institute for Clinical and Experimental Medicine in Prague. The objective of the thesis was to study differences in the biochemical processes and energy metabolism in the muscle tissue under physical workload between the groups of healthy subjects and patients with type 1 diabetes mellitus (DM1). We used phosphorous spectroscopy in combination with ergometer. The thesis is divided into five chapters. The first chapter describes theoretical introduction to in vivo 1 H and 31 P MR spectroscopy and muscle metabolism, the second chapter deals with the description of the experimental equipment and measurement, results of the thesis are reported in the third chapter and the fourth chapter is a discussion of results. Main result of this work is summarized in conclusion; we found differences between the metabolism of patients with DM1 and healthy volunteers.

(AJ) The three aims of the work were as follows: 1. Comparison of prostate magnetic resonance (MR) examination results from 1.5 T and 3 T scanners in patients with prostate carcinoma (PCa). MR findings of 103 patients (ages 44-72 years) were compared with histopathological results after radical prostatectomy. The work was focused on the accuracy of predicting local cancer staging and determining prostate tumour location. Patients were divided into three groups (A, B and C) based on the type of MR scanner and protocol used. Patient groups A and B were examined in 1.5T and 3T MR scanners equipped with surface coils in the identical multiparametric MR imaging protocol included dynamic contrast examination (DCE). Patient group C was examined in a 3T MR scanner without DCE. The highest accuracy of predicting the stage of PCa was seen in patients examined in 3 T MR scanner with DCE included in the protocol, however, no significant differences were seen between results from 1.5 T and 3.T MR scanners. No significant difference was also found in the accuracy of determining the location of prostate tumour between 1.5 T and 3T MR examinations, however, there were significant differences between sequences used, with the highest accuracy attained by using a combination of T2 weighted sequences and diffusion...

The dissertation is concerned to in vivo phosphorus MR spectroscopy (31 P MRS) and 1 H MR imaging (MRI) of muscle in combination with physical workload. The theoretical part of the thesis describes methodology of 31 P MRS measurement and its clinical use in research of metabolic changes in diabetes, heart failure and peripheral artery disease (PAD). The results of the thesis are divided into methodical and clinical parts. Methodical results deal with the construction of experimental equipment, software modification and development, and show of the reproducibility of the dynamic 31 P MRS. The MRI after exercise was used to the describe involvement of the individual calf muscles to muscle contraction during pedal movement in MR compatible ergometer. The first part of the clinical results of the thesis describes changes in muscle metabolism during diabetes and critical ischemia. In patients with critical ischemia the effect of treatment by angioplasty or transplantation of mesenchymal stem cells was evaluated. In the second part of the clinical results the metabolism of patients with heart failure complicated by sideropenia was studied. In these patients the effect of experimental treatment by iron carboxymaltose was described.

Bien qu'outil de référence pour le diagnostic et le suivi de la SEP, l'IRM conventionnelle ne reste que modérément corrélée à l'état clinique du patient. Afin de mieux caractériser les altérations pathologiques, nous employons dans ce travail les techniques d'IRM dites non conventionnelles que sont la spectroscopie par résonance magnétique (SRM) et l'IRM de diffusion. Un premier suivi hebdomadaire, a permis de mettre en évidence la sensibilité des métriques de diffusion et la spécificité de la SRM pour détecter les processus initiaux de la formation d'une lésion.Un second suivi a permis de mettre en évidence des modifications de la diffusivité dans plusieurs faisceaux de substance blanche, avec notamment une diminution de la fraction d'anisotropie et une augmentation de diffusivité radiale, s'aggravant avec l'avancée de la maladie et plus marquée dans les formes progressives.Enfin, l'application de la théorie des graphes a permis de caractériser la connectivité cérébrale dans les quatre formes cliniques et d'étudier leur évolution. Cette étude a permis de mettre en évidence des altérations dans tous les phénotypes cliniques, avec notamment une diminution de la densité du réseau cérébral, plus importante dans les formes progressives de la maladie et tendant à s'accentuer avec la progression de la maladie.Ce travail montre la sensibilité des techniques avancées d'IRM pour la caractérisation des altérations pathologiques et de leur évolution dans la SEP / While conventional MRI is the reference tool for the diagnosis and monitoring of MS, it remains only moderately correlated with the patient’s clinical status. In order to better characterize pathological alterations occurring in MS, we use in this work non-conventional MRI techniques, namely magnetic resonance spectroscopy (MRS) and diffusion MRI.A first weekly follow-up revealed the sensitivity of the diffusion metrics and the specificity of the SRM to detect the initial processes of lesion formation.A second follow-up revealed changes in diffusivity in several white matter fiber bundles, including a decrease in fraction of anisotropy and an increase in radial diffusivity, worsening with advancing disease and more marked in the progressive forms.Finally, the application of graph theory allowed to characterize the brain connectivity in the four clinical forms and to study their evolution. This study allowed us to highlight alterations in all the four clinical phenotypes, including a decrease in the cerebral network density, more marked in the progressive forms of the disease and tending to increase with its progression.This work shows the sensitivity of advanced MRI techniques for the characterization of pathological alterations and their evolution in MS

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OBJETIVO: O objetivo deste estudo é descrever as características do sinal nas lesões císticas da neurocisticercose nas imagens ponderadas em difusão e os metabólitos encontrados na espectroscopia de prótons. MATERIAL E MÉTODOS: Estudaram-se 38 pacientes (39 lesões) com neurocisticercose, usando-se difusão e espectroscopia de prótons. Os exames foram realizados em um magneto de 1,5 T (Signa Horizon LX: GE Medical Systems). A difusão foi realizada no plano axial, com múltiplos cortes com seqüência eco planar. A espectroscopia de prótons utilizou a seqüência PRESS (point-resolved spectroscopy) com TR of 1500 ms e TE de 30/135 ms. RESULTADOS: Os cistos apresentaram intensidade de sinal similar a do líquido cefalorraqueano (LCR) na difusão e valores de CDA sobreponíveis, variando de 1,36 a 3,18 x 10-3 mm2/s. Os picos detectáveis na espectroscopia foram lactato (96,3%), succinato (48%), alanina (40%), lipídeos (15%), aminoácidos citosólicos (7,5%) e acetato (3,7%). CONCLUSÃO: As lesões císticas da neurocisticercose apresentaram hipossinal na difusão e os picos encontrados na espectroscopia de prótons, em ordem decrescente de freqüência, foram lactato, succinato, alanina, lipídeos, aminoácidos citosólicos e acetato / PURPOSE: The objective of this study is to describe the signal behavior of cystic neurocysticercotic lesions on diffusion-weighted imaging (DWI) and single voxel proton spectroscopy findings. MATERIALS AND METHODS: We studied 38 patients (39 lesions) with neurocysticercosis, using diffusion-weighted images and proton MR spectroscopy. The examinations were performed on a 1.5 T scanner (Signa Horizon LX: GE Medical Systems). DWI was performed in the axial plane, using a multisection single shot echo planar pulse sequence. The single voxel proton spectroscopy technique used was the point-resolved spectroscopy (PRESS) sequence with a TR of 1500 ms, short and long TE of 30/135 ms. RESULTS: The cysts presented similar signal intensity to the CSF on DWI, with comparable ADC values, ranging from 1.36 to 3.18 x 10-3 mm2/s. The detectable peaks were lactate (96.3%), succinate (48%), alanine (40%), lipids (15%), cytosolic amino acids (7.5%) and acetate (3.7%). CONCLUSION: The cysts of neurocysticercosis presented hyposignal on DWI and peaks of lactate, succinate, alanine, lipids, cytosolic amino acids and acetate in proton spectroscopy, in decreasing order of frequency