Antipsychotics (AP) are used to treat psychotic symptoms in patients with e.g. schizophrenia or bipolar disorder. To find the right treatment may be difficult and demands carefully monitoring of the concentration in blood tests. In psychopharmacology therapeutic drug monitoring (TDM) of antipsychotics is an important tool for optimizing the treatment. With repeated blood tests it is possible to monitor the patient response, interactions and compliance. The aim of this project was to develop a method for sample preparation and analysis by UHPLC-MS/MS suitable for 12 antipsychotic drugs and 9 major metabolites in human plasma samples. The project was divided in to six different steps (1) Preparation of stock solutions and infusions of the analytes and internal standards. (2) Calculation of the monoisotopic molecular weight. (3) Optimization of the cone voltage and collision energy (4) Optimization of the chromatography by selecting the ideal mobile phase and column (5) Preparation of the calibration curve (5) Extraction with protein precipitation (6) Analysis on an Acquity I Class coupled to an Xevo TQ-XS MS and separation on a Cortects UPLC C18 (1.6 µm 2.1x50 mm) with gradient elution at 0.5 ml/min and a 5.20-min run-time. Detection was made with MRM, monitoring 2 ion transitions per compound. Isotope labeled internal standards were used for 9 of the compounds. In order for the method to be used in routine analysis, some work remains to be done regarding validating, optimizing the mass spectrometer's settings, testing for extraction yield, matrix effects and analysis of patient samples. / Antipsykotika är läkemedel som används för behandling av psykotiska symtom hos patienter som lider av t.ex. schizofreni eller bipolär sjukdom. Att hitta rätt behandling kan vara svårt och kräver att man noga övervakar koncentrationen i blodet. Med upprepade blodprov och så kallat terapeutiskt intervall (TDM) går det att optimera behandlingen, övervaka patientens respons på behandlingen samt eventuella interaktioner med andra läkemedel. Det går även att följa hur noga patienten är med att ta sina mediciner så kallat följsamhet eller compliance. Syftet med detta projekt har varit att utveckla en ny metod för att mäta 12 antipsykotiska läkemedel och 9 metaboliter i plasma med UHPLC-MS/MS. Det experimentella arbetet i detta projekt delades in i sex olika steg: (1) Beredning av stamlösningar och infusionslösningar av eftersökta substanser och deras internstandarder till rätt koncentration (2) Beräkning av molekylmassan för monoisotopen av varje substans. (3) Optimering av konvolt och kollisionsenergi (4) Optimering av kromatografin med val av lämplig mobilfas och kolonn (5) Beredning av kalibreringslösningar (6) Extraktion av substanser i plasma. Extraktionsmetoden som användes var proteinutfällning och analysen utfördes på Acquity I Class kopplat till Xevo TQ-XS MS. Separation gjordes med Cortects UPLC C18 (1,6 µm 2,1x50 mm) och gradienteluering med ett flöde på 0,5 ml/min och tiden för analys 5,20 min. Detektionen gjordes med MRM och två transitioner per substans. Isotop-inmärkt internstandard användes för 9 av substanserna. För att metoden ska kunna användas vid rutinanalys återstår en del arbete när det kommer till validering, optimering av masspektrometerns inställningar, test av extraktionsutbyte, matriseffekter och analys av patientprov.

A bioluminescência desperta o interesse humano há muitos séculos. Presente em quatro dos sete reinos taxonômicos, Monera, Chromista, Animalia e Fungi, cada um com mecanismos muito diferentes. Pode-se dizer que o estudo químico da bioluminescência começou com os experimentos de Dubois no século XIX, que cunhou os termos luciferina e luciferase, termos genéricos para o substrato e enzima envolvidos na reação, respectivamente. No caso específico de fungos, o envolvimento de enzimas foi debatido por quase cinco décadas, após a proposta enzimática de Airth e Foerster na década de 1960 e a não enzimática por Shimomura, em 1989. Somente em 2009 a hipótese de Airth e Foerster foi confirmada pelo nosso grupo, seguido da identificação da luciferina fúngica e o envolvimento de hispidina, como molécula precursora, em 2015 pelo grupo de Yampolsky. Para conseguir elucidar mecanismos químicos, a técnica de espectrometria de massas pode ser empregada para a identificação estrutural de reagentes e intermediários destas e de outras reações orgânicas. Após a confirmação do envolvimento de hispidina na bioluminescência de fungos, utilizou-se a técnica de cromatografia líquida acoplada a espectrometria de massas para identificar a presença de hispidina, seus derivados e intermediários precursores, em fungos e em algumas plantas. / Bioluminescence arises human interest for centuries. Occurring in four of seven taxonomical Kingdoms, Monera, Chromista, Animalia and Fungi, each of them with completely different mechanisms. The chemical study of bioluminescence starts in XIX century with Dubois, who coined the terms luciferin and luciferase, generic terms for substrate and enzyme involved in the bioluminescent reaction, respectively. In the specific case of fungi, enzyme involvement has been debated for almost five decades, after the enzymatic proposal by Airth and Foerster, during the 1960 decade, and the non-enzymatic proposal by Shimomura in 1989. It was only in 2009 when the proposal by Airth and Foerster was confirmed by our group, followed by the identification of the fungal luciferin and the involvement of hispidin, as the precursor molecule, in 2015 by Yampolskys group. To elucidate the chemical mechanisms, mass spectrometry can be employed to structural identification of reagents and intermediates on these and other organic reactions. After the confirmation of hispidin involvement in fungi bioluminescence, liquid chromatography coupled with mass spectrometry was uses do identify the presence of hispidin, its derivatives and precursor intermediates in fungi and selected plants.

A ifosfamida é um pró-fármaco que apresenta um átomo de fósforo quiral, disponível na clínica como mistura racêmica dos enantiômeros(+)-(R)-ifosfamida e (-)-(S)-ifosfamida para a utilização na quimioterapia. O objetivo do presente estudo foi o de avaliar a disposição cinética dos enantiômeros da ifosfamida em plasma de pacientes portadoras de câncer de colo do útero. As pacientes investigadas (n=6) receberam 2,5 g/m2 de ifosfamida racêmica administrada como infusão de 12 horas, sendo coletadas amostras de sangue imediatamente antes da administração e em 6, 10, 11, 12, 13, 14, 16, 18, 20 e 22 horas após a administração do fármaco. Os enantiômeros da ifosfamida foram quantificados por LC-MS/MS, sendo separados na coluna OD-R em aproximadamente 14 min empregando como fase móvel mistura de acetonitrila e água (20:80) adicionada de 0,2% de ácido fórmico. O método é linear no intervalo de 1-100 ?g de cada enantiômero/mL de plasma a partir de extrações de alíquotas de 25 ?L de plasma, compatíveis com a aplicação em farmacocinética de infusão de curta duração da ifosfamida em pacientes com câncer de colo do útero.A disposição cinética da ifosfamidaéenantiosseletiva, com observação de maiores valores de AUC (437,31 vs349,18 h.?g/mL) e menores valores de clearance(4,17 vs5,22 L/h) para o enantiômero(+)-(R)-ifosfamida. / The prodrugifosfamide has a chiral phosphorus atom, and is available clinically as a racemic mixture of the enantiomers (+)-(R)-ifosfamide and (-)-(S)-ifosfamide for use in chemotherapy. The aim of this study was to evaluate the kinetic disposition of the enantiomers of ifosfamide in plasma of patients with cancer of the cervix. The investigated patients (n = 6) received 2.5 g/m2 of racemic ifosfamide administered as infusion of 12 hours and blood samples were collected immediately before administration and at 6, 10, 11, 12, 13, 14, 16, 18, 20 and 22 hours after drug administration. The enantiomers of ifosfamide were quantified by LC-MS/MS and were separated in an OD-R column in about 14 min using as mobile phase a mixture of acetonitrile and water (20:80) plus 0.2% of formic acid. The method is linear within the range of 1-100 mg of each enantiomer/mL of plasma from extractions of 25 mL aliquots of plasma, suitable for the application in pharmacokinetics of short duration infusion of ifosfamide in patients with cervical cancer. The kineticdisposition of ifosfamide is enantioselective, with observation of higher values of AUC (437.31 vs 349.18 h.?g/mL) and lower values of clearance (4.17 vs 5.22 L/h) for the enantiomer (+)-(R)-ifosfamide.

Os agrotóxicos, quando presentes na água, são definidos como micropoluentes: mesmo em baixas concentrações, conferem à água características de toxicidade. Aponta-se o RS como o quarto estado do Brasil com maior volume de vendas anuais de agrotóxicos, chegando a mais de 50 mil toneladas por ano. Desde 2014 está em vigência no território gaúcho uma portaria estadual que acrescenta a exigência de 46 parâmetros de agrotóxicos no padrão de potabilidade da água, além dos 27 já exigidos pela portaria nacional. Neste trabalho, 89 pesticidas foram avaliados conforme três métodos teóricos de predição de risco de contaminação em mananciais subterrâneos e superficiais: índice Ground Ubiquity Score (GUS), método Screening da USEPA e método de GOSS, baseados nas propriedades físico-químicas dos pesticidas. Nos anos de 2015 e 2016, foram realizadas 143 coletas de água para consumo humano em 45 municípios da bacia hidrográfica do Alto Jacuí (G-50), a que possui a maior taxa de aplicação de agrotóxicos do estado, para análises de vigilância através de laboratório contratado, envolvendo os 89 pesticidas presentes na portaria nacional e estadual. Em paralelo, 183 pesticidas presentes em uma solução-padrão foram empregados no desenvolvimento de um novo método de análise multiresíduos, com etapas de pré-tratamento por filtração seguidas por extração em fase sólida e LC-MS/MS, aplicada para os três maiores municípios da G-50 (Carazinho, Soledade e Cruz Alta) em amostras de água bruta e tratada, durante quatro períodos de aplicação de agrotóxicos dos principais cultivos agrícolas da região. Dos pesticidas mencionados nas portarias nacional e estadual, 12 foram classificados com o maior risco de contaminação tanto em água superficial e subterrânea de acordo com os três métodos teóricos empregadas. Nas análises de vigilância foi detectado permetrina em Carazinho e alaclor em Espumoso. No método desenvolvido, 75 pesticidas foram validados de acordo com os critérios propostos e atingiram limites de detecção (LD) e limites de quantificação (LQ) que variaram de 10 a 300 ng L-1. Na aplicação do método nas coletas dos três municípios da G-50 não houve detecção de nenhum pesticida. / Agrochemicals, when present in water, are defined as micropollutants, thus giving the water toxic characteristics, even at low concentrations. The Rio Grande do Sul state in Brazil was found to rank fourth in annual agrochemical sales in the country, surpassing 50 thousand tons per year. A state regulation in effect in the RS state since 2014 requires the inclusion of 46 new agrochemical parameters concerning the standards for potable drinking water, in addition to 27 existing parameters mandated by national ordinance. Seventy-five pesticides were evaluated based on three theoretical methodologies of contamination risk prediction in underground and surface water sources, by measuring the physicochemical properties of pesticides: GUS index, USEPA screening method and Goss method. In 2015 and 2016, 143 water samples were collected from sources of potable water in 45 municipalities located in the Alto Jacuí river basin, a region which has the highest pesticide application rate in the RS state. A private laboratory analyzed samples from 89 pesticides present in the national and state regulation. Paralely, 183 pesticides were evaluated by a new multi-residue analysis method. Filtration was conducted in the pre-treatment steps, followed by a solid phase extraction liquid chromatography coupled with mass spectrometry analysis (SPE-LC-MS/MS) of raw and treated water samples from the three largest G-50 municipalities (Carazinho, Soledade and Cruz Alta), during the four pesticide application periods of the main crops cultivated in the region. Twelve pesticides were classified as of high risk in terms of contamination for both surface and groundwater, in accordance with the three theoretical methodologies implemented. During analysis of the surveillance data collected, the pesticides permethrin and alachlor were found in Carazinho and Espumoso, respectively. Through the methodology developed, 75 pesticides were evaluated according to the criteria proposed, reaching lower detection limit (LD) and quantification limit (LQ) ranging from 10 to 300 ng L-1, respectively. During the implementation of the methodology for sample collections in the three G-50 municipalities, no pesticides were detected.

Trimethylamine-n-oxide (TMAO) is a metabolite found in plasma/serum in humans. Elevated levels of TMAO have been associated with several types of heart disease. It’s therefore of interest to make a simple analytical method to analyse TMAO and other metabolites that are degraded to TMAO, including betaine. In this study, the goal was to develop a method for the sample preparation and analysis of these compounds in human plasma. Sample preparation was performed with an Ostro 96-well method for sample clean-up. The analysis was performed by ultraperformance liquid chromatography – hydrophilic interaction liquid chromatography – tandem masspectrometry (UPLC-HILIC-MS/MS) in multiple reaction monitoring (MRM)-mode using electrospray ionization in positive mode (ESI+)-mode as the ion source. The analytes eluted under five minutes and were all baseline separated in the chromatogram. TMAO and betaine were quantified in quality control (QC) plasma samples using external calibration. Concentration of TMAO ranged from 132 ng/mL – 253 ng/mL and 1025-2084 ng/mL for betaine. Due to the lack of isotopically labelled standards for TMAO and betaine, valine-d8 was tested as an internal standard for the extraction; however, it was not a suitable option due to the low recovery obtained (5-34%) and the low response in ESI+. The recovery needs to be investigated further using isotopically labelled TMAO or betaine. Overall, the developed UPLC-HILIC-MS/MS method was found to be suitable for analysis of TMAO and betaine in human plasma. Further development and validation is required before application to samples from clinical studies.

Pluripotent embryonic stem cells (ESCs) possess an unlimited capacity for self-renewal. This property of ES cells is both defining and unique. Harnessing this potential of ESCs would provide tremendous opportunity in the field of regenerative medicine and its attempts to combat degenerative diseases such as Parkinson’s, muscular dystrophy, etc. In 2006, Shinya Yamanaka was able to demonstrate that the ectopic expression of four proteins could reverse the process of differentiation and provide somatic cells with the characteristics ESCs. One year later, James Thompson’s group proved the same feat could be accomplished in human somatic cells using a different set of four proteins, including Nanog. The prospect of converting one’s own cells into a stem cell which could subsequently differentiate and repopulate an area of the body afflicted by gross degeneration was revolutionary. In the years following Yamanaka’s and Thompson’s discoveries, however, there has been little insight gained into how these proteins are regulated post-translationally. In this study, four proteins which had previously been identified by Yamanaka as being ‘pluripotency factors’ were used as baits in order to ascertain a protein-protein interaction network. This network was subsequently interrogated using various chemical compounds and small molecules in order to dissect the signal transduction pathways feeding into pluripotency, as well as, post-translational modifications regulating the factors themselves. In this way, the chemical inhibitor H89 was found to decrease the presence of Nanog phosphorylation and possibly its dimerization resulting in the Nanog protein being destabilized and targeted for degradation. Inversely, the pan-cullin inhibitor MLN4924 was identified to increase the abundance of both phosphorylated Nanog and total Nanog protein. In an attempt to identify the Cullin Ring Ligase (CRL) responsible for the degradation of Nanog protein in ESCs, each cullin identified in the protein interaction network was inhibited using specific shRNAs. Quantitative fluorescence microscopy was performed and identified that inhibition of CUL3 increases Nanog protein levels, suggesting that a CUL3-based CRL may be responsible for the post-translation regulation of Nanog. Additionally, the quantitation of Sox2 protein levels in CUL4B shRNA cell line demonstrates that Sox2 protein levels may be regulated by a CUL4B-based CRL. Further studies will reveal whether or not CUL4A depletion also results in elevated Sox2 protein levels. If not, this would include the pluripotency factor Sox2 among the recently identified CUL4B-isoform-specific substrates for degradation and possibly provide the basis for a hypothesis of developmentally regulated substrate specificity. In addition to MLN4924, several other small molecules were identified as being able to increase phospho-Nanog protein levels in this study. Among them were the cell permeable peptides Ht-31 and PKI (14-22) amide. These peptides were found to both stabilize phospho-Nanog and produce ES cell colonies that uniformly express the Nanog protein. The development of a growth medium containing these peptides in order to maintain homogeneous pluripotent ES cells is currently in progress and received backing for a patent application by the University of Edinburgh on February 23, 2012.

A análise de fármacos é fundamental nas diversas fases do desenvolvimento farmacêutico, tais como estudos de formulação, estabilidade e controle de qualidade do produto. A rivaroxabana (RIV) é um anticoagulante de uso oral indicado para prevenção da formação de coágulos venosos. A literatura pesquisada apresenta poucos relatos de determinação quantitativa e de estudos de estabilidade do fármaco em comprimidos. E ainda nenhum método analítico em compêndios oficiais Diante do exposto, o objetivo deste trabalho foi desenvolver e validar métodos analíticos para determinação qualitativa e quantitativa da RIV por cromatografia líquida de alta eficiência com detecção por UV e de ultra eficiência com detecção por espectrometria de massas (CLAE-UV e CLUE-EM) e eletroforese capilar (EC). Os resultados encontrados foram adequados conforme o preconizado nos guias oficiais nacionais e internacionais. Foi avaliada também a viabilidade da técnica de eletroforese capilar em microchip para análise de RIV. Através de método desenvolvido por CLAE foi realizado estudo de cinética de degradação e posterior avaliação do potencial tóxico in vitro das amostras de degradação forçada da RIV. A identificação de três produtos de degradação majoritários da RIV, formados a partir de estresse ácido, alcalino e fotolítico, foi realizada por CLUE-EM/EM, possibilitando a proposição da estrutura molecular de cada produto de degradação. O potencial tóxico da RIV antes e depois da exposição à degradação forçada foi avaliado através dos métodos in vitro MTT, Vermelho Neutro, Ensaio Cometa e DNA de baixo peso molecular. Não foram encontrados sinais de dano ao DNA celular, contudo, amostras de RIV expostas ao meio alcalino apresentaram maior redução da viabilidade celular. O trabalho avaliou ainda o perfil de dissolução da RIV em comprimidos baseado nos dados de absorção in vitro conforme modelagem in silico dos dados, estabelecendo uma correlação linear entre a fração absorvida e fração dissolvida. As diferentes metodologias e técnicas desenvolvidas e aplicadas nesse trabalho contribuem para o desenvolvimento do controle de qualidade farmacêutico na direção de ensaios mais confiáveis que garantam a segurança e eficácia de medicamentos. / Drug analysis is critical at various stages of pharmaceutical development, such as formulation studies, stability and quality control products. Rivaroxaban (RIV) is an oral anticoagulant indicated for prevention of thromboembolism. Literature contains few reports of quantitative determination and drug stability studies of RIV on pharmaceutical formulation. Analytical method for RIV quality control are not evaluable on official guides yet. This research work aimed to develop and validate analytical methods for qualitative and quantitative determination of RIV by high and ultra performance liquid chromatography with UV detection mass spectrometry detection (HPLC -UV and UPLC-MS) and capillary electrophoresis (CE). The results were adequate as recommended in national and international official guides. Reliability of RIV analysis by microchip capillary electrophoresis was also assessed. Through the method developed by HPLC degradation kinetic studies were performed, zero order kinetic has better description of RIV degradation behaviour. RIV toxic potential before and after exposure to forced degradation was assessed by in vitro methods of MTT, Neutral Red, Comet Assay, and Low Molecular Weight DNA. There were no signals of DNA damage however, RIV samples exposed to alkaline medium showed increased reduction in cell viability. Identification of RIV degradation products formed after exposure to acid and alkaline media and UVC radiation was performed by UPLC-MS / MS. It was possible to elucidate molecular structures of three major degradation products. This study also assessed the dissolution profile of RIV tablets based on in vitro absorption data, a linear point-to-point correlation was found for fraction absorbed and dissolved. Different methodologies and techniques developed and applied in this work can contribute to the development of pharmaceutical quality towards more reliable tests to ensure safety and efficacy of medicines.

L'ypérite est une arme chimique de guerre de la famille des vésicants. Sa facilité de synthèse et l'existence de stocks importants dans le monde en font une menace à la fois pour les populations civiles et les militaires. Cette menace est renforcée par le fait qu'à l'heure actuelle il n'existe pas d'antidote efficace contre ce toxique de guerre. L'alkylation de l'ADN par l'ypérite aboutit à la formation d'adduits. L'objectif de cette thèse a consisté à mettre au point une méthode de détection quantificative de ces adduits par chromatographie liquide haute performance couplée à la spectrométrie de masse en tandem (HPLC-MS/MS) et d'appliquer cette méthode à l'étude de leur formation et de leur persistance après une exposition cutanée chez la souris SKH-1. Les résultats ont montré dans la peau exposée que la fréquence des adduits était maximale dès 6h post-exposition. Toutefois, leur persistance était relativement longue puisqu'ils étaient toujours détectables 3 semaines après exposition. Une diffusion radiale de l'ypérite a été mise en évidence par la détection des adduits qu'elle forme dans des échantillons de peau non directement exposés. Les adduits ont été également détectés dans plusieurs organes internes. La fréquence maximale des adduits a été mesurée 6h ou J1 post-exposition. Ils ont été décelés jusque J21 post-exposition. Les résultats ont montré qu'il se formait plus d'adduits dans le cerveau et les poumons que dans les reins, la rate et le foie. La persistance des adduits dans le cerveau et les poumons était moindre après la détersion de la peau exposée, illustrant ainsi la constitution dans cette dernière d'un réservoir d'ypérite. La mesure des activités de réparation de l'ADN a montré que l'ypérite exerçait une double action génotoxique, à savoir formation de dommages à l'ADN et inhibition des activités de réparation. / Sulphur mustard is a chemical warfare which belongs to the vesicants family. Its easy synthesis and the existence of important stocks in the world make it a threat for both the general population and militaries. This threat is reinforced by the fact that currently there is not efficient antidote against this war toxic. DNA alkylation by sulphur mustard leads to adducts formation. The objective of this thesis consisted in developing a method of quantification of these adducts by high performance liquid chromatography coupled to tandem mass spectrometry (HPLC-MS/MS) and to apply this method to the study of the formation and persistence of the adducts after cutaneous exposure in SKH-1 mouse. Results have shown in exposed skin that adducts frequency was maximal as soon as 6h post-exposure. A radial diffusion of sulphur mustard was highlighted by the detection of adducts it forms in skin samples non-directly exposed. Adducts were also detected in several internal organs. Maximal frequency was measured at 6h or d1 post-exposure. They were detected until d21 post-exposure. Results have shown that adducts were produced in larger amount in brain and lungs than in kidneys, spleen and liver. The persistence of adducts was lower in brain and lungs after the detersion of exposed skin, thus illustrating the constitution of a reservoir of sulphur mustard in this tissue. Measurement of DNA repair activities showed that suilphur mustard behave as a two-edge sword genotoxic, namely formation of DNA damages and inhibition of repair activities.

A bioluminescência desperta o interesse humano há muitos séculos. Presente em quatro dos sete reinos taxonômicos, Monera, Chromista, Animalia e Fungi, cada um com mecanismos muito diferentes. Pode-se dizer que o estudo químico da bioluminescência começou com os experimentos de Dubois no século XIX, que cunhou os termos luciferina e luciferase, termos genéricos para o substrato e enzima envolvidos na reação, respectivamente. No caso específico de fungos, o envolvimento de enzimas foi debatido por quase cinco décadas, após a proposta enzimática de Airth e Foerster na década de 1960 e a não enzimática por Shimomura, em 1989. Somente em 2009 a hipótese de Airth e Foerster foi confirmada pelo nosso grupo, seguido da identificação da luciferina fúngica e o envolvimento de hispidina, como molécula precursora, em 2015 pelo grupo de Yampolsky. Para conseguir elucidar mecanismos químicos, a técnica de espectrometria de massas pode ser empregada para a identificação estrutural de reagentes e intermediários destas e de outras reações orgânicas. Após a confirmação do envolvimento de hispidina na bioluminescência de fungos, utilizou-se a técnica de cromatografia líquida acoplada a espectrometria de massas para identificar a presença de hispidina, seus derivados e intermediários precursores, em fungos e em algumas plantas. / Bioluminescence arises human interest for centuries. Occurring in four of seven taxonomical Kingdoms, Monera, Chromista, Animalia and Fungi, each of them with completely different mechanisms. The chemical study of bioluminescence starts in XIX century with Dubois, who coined the terms luciferin and luciferase, generic terms for substrate and enzyme involved in the bioluminescent reaction, respectively. In the specific case of fungi, enzyme involvement has been debated for almost five decades, after the enzymatic proposal by Airth and Foerster, during the 1960 decade, and the non-enzymatic proposal by Shimomura in 1989. It was only in 2009 when the proposal by Airth and Foerster was confirmed by our group, followed by the identification of the fungal luciferin and the involvement of hispidin, as the precursor molecule, in 2015 by Yampolskys group. To elucidate the chemical mechanisms, mass spectrometry can be employed to structural identification of reagents and intermediates on these and other organic reactions. After the confirmation of hispidin involvement in fungi bioluminescence, liquid chromatography coupled with mass spectrometry was uses do identify the presence of hispidin, its derivatives and precursor intermediates in fungi and selected plants.

Despite the recognized advances in the treatment of breast cancer, it still accounts for 15% of all cancer-related deaths. 90% of breast cancer deaths are due to unpredicted metastasis. There is neither successful treatment for metastatic patients nor a specific test to predict or detect secondary lesions. Patients with primary tumor will be either over-treated with cytotoxic side effects or under-treated and risk recurrence. This necessitates the need for personalized treatment, which is hard to offer for such heterogeneous disease. Obstacles in treating breast cancer metastasis are mainly due to the gaps exist in the understanding of the molecular mechanism of metastasis. The linear model of metastasis is supported by several observations that reflect an early crosstalk between the primary and secondary tumor, which in turn makes the secondary microenvironment fertile for the growth of disseminated cells. This communication occurs through circulation and utilizes molecules which have not been identified to date. Identifying such molecules may help in detecting initial stages of tumor colonization and predict the target organ of metastasis. Furthermore, these molecules may help to provide a personalized therapy that aims to tailor treatment according to the biology of the individual tumor. Advances in proteomics allows for more reproducible and sensitive biomarker discovery. Proteomic biomarkers are often more translatable to the clinic compared to biomarkers identified using other omics approaches. Further, protein biomarkers can be found in biological fluids making them a non-invasive way to treat or investigate cancer patients. We present in this manuscript our study of the use of a proteomic approach on blood serum samples of metastatic and non-metastatic patients using LC-MS/MS quantitative analysis machine to identify molecules that could be associated with different stages of breast cancer metastasis. We focused on the deferential expression of low molecular weight biomolecules known to reflect disease-specific signatures. We manually analyzed 2500 individual small biomolecules in each serum sample of total of 51 samples. Comparisons between different sample types (from stage I and III Breast Cancer patients in this case) allows for the detection of unique short peptide biomarkers present in one sample type. We built a multi-biomarker model with more sensitivity and specificity to identify the stage of the tumor and applied them on blinded set of samples to validate prediction power. We hope that our study will provide insights for future work on the collection, analysis, and understanding of role of molecules in metastatic breast cancer.