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The aim of the research documented in this thesis was to explore issues associated with the development of instrumentation for life detection and characterisation in a planetary exploration context. Within this aim, the following objectives had to be achieved: 1. To consider current and near-future single molecule detection (ultra-low lower limit of detection) analytical techniques that would be compatible with development into a Space qualifiable in situ analytical instrument for the detection of biomarkers in a planetary exploration context. 2. To practically consider the consequences of Planetary Protection and Contamination Control on the development of a sample return instrumentation in a planetary exploration context. 3. To consider the implications of flying an in situ instrument on-board a stratospheric balloon platform in order to apply them into a specific planetary exploration mission: In order to achieve the objectives described above, the following work was pursued:  A desk-based European Space Agency (ESA) study was carried out which entailed producing a literature review on single molecule detection technologies that had to be validated by the expert community. This was done by organising an International Workshop on Single Molecule Detection Technologies for Space Applications in March 2009 at Cranfield University, UK. The approved technologies then had to be analysed with standard analytical techniques (i.e., tradeoffs) in order to propose a specific technology for development and present its breadboard implementation and test plans at the end of the study.  A sample return experiment implementing PP&CC constraints and protocols was designed, built, tested and flown on-board the ESA, Swedish Space Corporation (SSC), Swedish National Space Board (SNSB) and German Space Agency (DLR) BEXUS stratospheric balloon platform. The biological and engineering results obtained from the sample return flight were then analysed and lessons learnt obtained for future flights.  Another desk-based study was performed to research future stratospheric balloon platforms for the exploration of Venus’ cloud layer. The in situ instrument previously proposed for the detection of biomarkers for planetary exploration missions was then put forward as a possible payload for a Venusian stratospheric balloon platform and approved by experts during the Venus Exploration Analysis Group (VEXAG) conference held in August 2011 in Washington D.C, USA. The first part of the research involved studying ultra-low lower limit of detection technologies as these have the potential to impact significantly on the technological and scientific requirements of future Space missions. Two systems were proposed: one based on Tandem Mass Spectrometry (with Cylindrical Ion Trap analysers) followed by Surface Enhanced Raman Scattering spectroscopy to create an MS/MS-SERS instrument for the detection of astrobiology biomarkers in Martian regolith, Europan ice and samples from Titan’s hydrocarbon lakes; and a second one as a Stand-Alone SERS system for the detection of biomarkers in Enceladean plumes, Venusian clouds and cometary coma. The second part of the research practically explored the design of instrumentation for stratospheric balloon platforms. CASS•E, the Cranfield Astrobiological Stratospheric Sampling Experiment, was a life detection experiment that aimed to be capable of detecting stratospheric microorganisms. The experiment consisted of a pump which drew air from the Stratosphere through a 0.2 μm collection filter which retained any microorganisms and >0.2 μm particulates present in the pumped air. Due to the expected rarity of microbes in the Stratosphere compared to the known levels of contamination at ground level, Planetary Protection and Contamination Control (PP&CC)constraints were introduced. Therefore PP&CC protocols were followed to implement Space qualified cleaning and sterilisation techniques; biobarrier technology was implemented to prevent re-contamination of the instrument after sterilisation; and cleanliness and contamination was monitored throughout assembly, integration and testing. The third part of the research demonstrated how an instrument from the first part of the study could be proposed as a payload on-board a stratospheric balloon platform with a focused mission context, i.e., a life detection mission for Venus. Therefore, the research concluded with the proposal of a payload for a Venus mission based on SERS technology on-board a stratospheric balloon platform to search for life above or in the mid Venusian cloud cover.

Mentha longifolia subsp. polyadena was collected from seven localities in South Africa and from a single population in Botswana to study the essential oil composition and antimicrobial activity of this ethnomedicinal plant. The essential oils were obtained by hydrodistillation and analysed by gas chromatography coupled to mass spectroscopy (GC/MS) and a cluster analysis was performed on the essential oil dataset. From eight samples (representing eight natural populations), two major chemotypes were identified: (i) a menthofuran rich type (51.4% - 61.6%); and (ii) a cis-piperitone epoxide (14.7% – 35.7%) and piperitenone oxide (14.6% - 65.7%) rich type. The constituent analysis showed quantitative variation with higher amounts of oxygencontaining monoterpenes ranging from 56.5% to 89.6% whilst the sesquiterpene hydrocarbons ranged from 4.4% to 16.7%. The essential oil from the different localities mostly showed moderate to good antimicrobial activity against Staphylococcus aureus, Staphylococcus epidermidis, Bacillus cereus, Moraxella catarrhalis, Yersinia enterocolitica and Enterococcus faecalis. The oils were generally inactive against Escherichia coli and Salmonella typhimurium. Candida albicans and Cryptococcus neoformans indicated highest sensitivities for oil samples from Komukwane (3 mg/ml and 0.5 mg/ml respectively) and Prins Albert (0.5 mg/ml and 1.6 mg/ml respectively). The HPLC profiles of the methanol and chloroform (1:1) extracts were more conservative and less variable compared to the essential oils. Two major peaks corresponding to retention times of 22.39 min and 26.47 min were present in all eight samples. Most of the solvent extracts displayed moderate to good antimicrobial activity against Gram-positive pathogens, in particular against S. aureus, S. epidermidis and B. cereus with MIC values ranging from 0.5 mg/ml to 2 mg/ml in most cases. The extracts also demonstrated moderate to good activity against most of the Gram-negative pathogens, in particular against Y. eneterocolitica and M. catarrhalis, with MIC values ranging from 0.5 mg/ml to 2 mg/ml. These results may in part provide scientific evidence for the extensive use of Mentha longifolia in traditional healing.

Este trabalho descreve a montagem de um espectrômetro de massa por tempo de voo para análise de macromoléculas, projetado e desenvolvido no Laboratório de Instrumentação e Partículas (LIP) da USP, e apresenta os primeiros resultados obtidos com o equipamento. O espectrômetro é constituído pelo acoplamento de uma fonte de íons Matrix Assisted Laser Desorption Ionization (MALDI) com um acelerador de partículas do tipo tandem. O objetivo é aumentar a energia dos íons moleculares produzidos na fonte visando a uma maior eficiência de detecção de moléculas de massas elevadas. Amostras padrão de iodeto de césio (CsI) foram utilizadas para caracterização e verificação das condições de funcionamento do aparelho. O início dos estudos de moléculas de massas grandes se deu com medidas de amostras de insulina. Um método de simulação foi desenvolvido para auxiliar a análise dos espectros de massa e seus resultados foram comparados com os dados experimentais obtidos com o espectrômetro. O trabalho aponta novas possibilidades para a aplicação de aceleradores de partículas em análise de massa de macromoléculas. / The present work describes the assembly of a time-of-flight mass spectrometer for analysis of macromolecules, designed and developed at the Instrumentation and Particle Laboratory (LIP), and presents the first results obtained with the equipment. The spectrometer is based on the coupling of a Matrix Assisted Laser Desorption Ionization (MALDI) ion source with a tandem type particle accelerator. The objective is to increase the molecular ions energy produced by the source, and thus improve the high mass detection efficiency. Standard samples of cesium iodide (CsI) were used for characterization and verification of the equipment operation setup. Measures of insulin samples marked the initial studies of large masses. A simulation method was developed to assist in mass spectra identification and the results were compared with experimental data obtained with the spectrometer. The results open new possibilities for the application of particle accelerators in macromolecules mass analysis.

In this research project, real natural strawberries bought from different local sources were profiled by gas chromatography-mass spectroscopy (GCMS). These profiles were then used as a reference to compare GCMS profiles of commercial artificial strawberry flavor products such as strawberry flavored Cool Splashers™, Gatorade®, and Aquacal® flavored water. The chromatograms obtained were patterned using simple visual observations, scatter plot designs, Mann-Whitney U Test, and correlation coefficients. The artificially flavored commercial products tend to have simpler chromatograms. The Burger King® milkshake, Gatorade®, and Hi-C® are the most similar to that of the natural strawberry flavor. Their correlation coefficients are 0.972, 0.870, and 0.984 respectively. The Mann-Whitney U Test results also support the conclusions from correlation coefficients. However, the natural products tend to have more constituents including the main flavoring compounds. Thus fresh produce have better flavor and are more nutritious for a good reason.

Endocannabinoids, and the fatty acid amides from which they are a member, have garnered greater scientific interest in the last two decades due to the cannabimimetic properties of these endogenous molecules. The most well-known of these is Anandamide, which has thus far been discovered in several species of animal ranging from C. elegans, fruit flies, to bovine and humans. Because of the importance and increasing impact of these compounds a brief overview is first presented herein, with a major focus on the N-acyldopamines due to the direct impact they potentially pose to human physiology. Secondly, the detection and quantitative analysis of these molecules was conducted in the recently fully genome sequenced honeybee and red flour beetle, due in part to recent research showing the existence of these molecules in D. melanogaster, to which no known cannabinoid receptors had been found to date. Interest in these potentially new model organisms may provide additional insight not only into the endocannabinoids but also as potential targets for protection of honeybees and pest control of red flour beetles. Utilizing established HPLC-MS methods for the detection and quantification of these compounds provided a series of endogenous results for these molecules within both farmed and feral honeybees and the red flour beetle. Additionally, a protein sequence and motif homology study with a newly discovered acyltransferase from Fruit flies shows strong evidence that a similar enzyme is expressed in both honeybees and red flour beetles. Therefore providing future steps for the continuation of this research to better elucidate and quantify the endocannabinoids as well as determine the biosynthetic metabolism within these organisms.

Les déchets solides générés par notre société sont nombreux. Les cendres volantes sont des déchets solides produits lors de la combustion de déchets domestiques ou industriels dans des incinérateurs. Les cendres volantes sont également produites par la combustion du charbon dans les centrales à charbon. Les cendres volantes sont des résultats de ces combustions et représentent importante quantité de déchets produits chaque année par notre société. Les possibilités de recyclage de ces déchets sont nombreuses : dans la construction, l'industrie routière. Elles sont également stockées pour une utilisation ultérieure. Les origines différentes des charbons et déchets incinérés conduisent à une minéralogie et une composition élémentaire complexe. En tant que sous-produit le devenir des cendres volantes est important à déterminer, aussi la détermination de la composition élémentaire de ces cendres volantes est-elle indispensable.Les méthodes classiques de préparation des échantillons solides sont la minéralisation acide ou la fusion alcaline. Ces procédures prennent du temps et supposent l'utilisation de réactif, de plus la digestion complète n'est pas toujours assurée. Le risque de contamination par les réactifs employés est important au cours de ces méthodes classiques de préparation. Au cours de la dernière décennie, le développement d'analyse directe d'échantillons solides en utilisant des méthodes d'ablation laser a été important en raison de la nécessité de réduire le temps d'analyse et de réduire aussi la consommation de réactifs. Dans ce travail, deux méthodes basées sur l'ablation par laser seront étudiées pour l'analyse des cendres: Laser Induced Breakdown Spectroscopy (LIBS) et Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS). La spectrométrie LIBS sera étudiée pour la détermination quantitative des éléments majeurs dans les échantillons de cendres alors que le couplage ablation laser ICP / MS sera employé pour détermination des éléments traces. L'optimisation de la sensibilité et les stratégies d'étalonnage sont les principaux problèmes traités dans ce travail. La préparation des échantillons et l'optimisation ont été effectuées pour déterminer les éléments tels que Al, As, Ba, Ca, Cr, Cu, Fe, Mg, Mn, Pb, Sr, V et Zn par les deux méthodes.Les performances analytiques telles que les limites de détection, justesse ont été obtenus à la suite d'optimisations appropriées des liants et de la sélection de l'étalon interne approprié. En conclusion, l'analyse directe de solides en utilisant les techniques basées sur l'ablation laser développées dans ce travail conduisent à une justesse acceptable pour la détermination des éléments majeurs et traces dans les cendres volantes

Laser Ablation - Inductively Coupled Plasma - Mass Spectrometry (LA-ICP-MS) is a powerful analytical technique for the direct elemental analysis of solid samples, with spatial resolution down to a few microns However, calibration remains the limiting factor in obtaining quantitative analysis by LA-ICP-MS for a wide range of sample types. No universal method exists as yet and the ones that are currently used tend to employ matrix-matched solid standards Matrix-matched solid standards are not available for many types of sample, such as polymers, biological materials, fluid inclusions, etc The need for a universal method of calibration that involves standards that are easy to prepare and suitable for any type of sample is required. Additional to matrix-matching, internal standards are widely used in LA-ICP-MS for quantitative analyses The internal standard compensates for the different ablation yields from the sample and the standard and for the laser shot to shot variation. Given that the use of an internal standard is required to obtain reliable results, the need for matrix-matching might be regarded as questionable This project has focused on the development and application of a new method of calibration for LA-ICP-MS. It involves the use of aqueous standards whose absorption characteristics are modified by the addition of a chromophore to the solution. Additives were selected for ablation with KrF excimer, and Nd.YAG lasers The influence of the additive concentration on the ablation yield was investigated for different laser energies. Response curves were obtained showing that as the additive concentration was increased, less energy was required to ablate the modified standard solutions efficiently. A general procedure was then defined for the preparation and use of the modified standard solutions for a given sample. The new method of calibration was used for the quantitative analysis of different sample types· low density polyethylene (LDPE), polyketone (PK), polyethylene thin film as well as gels contained in the thin film, and stainless steel. Investigations were carried out on the mechanism of ablation of the modified standard solutions. It appeared that the ablation proceeded by a three-step process leading ultimately to nebulisation of the bulk liquid.

The following thesis demonstrates two isotope tracing experiments that measure oxygen transport through electrochemically polarized solid oxides. Cathode-symmetric ‘button’ cells with yttria stabilized zirconia(YSZ) electrolytes and either strontium doped lanthanum manganate(LSM) or composite LSM/YSZ cathodes were studied. The first experiment measured the residence time distributions(RTD) of 34O2. The measured RTDs were compared at different temperatures(700-800°C) and applied potentials(-2 to -8V). Comparisons with simulated RTDs revealed that oxygen transport was laterally heterogeneous. Delamination of the counter electrode is likely the source of the heterogeneity. The second experiment measured a wave of 18O by exposing an interior cross section and applying ToF-SIMS analysis. A depth profile was produced that spans the cathode and electrolyte interface. The depth profile was compared with a variety of limiting oxygen activation scenarios predicted by a simple 1-D model. Comparisons demonstrated that oxygen activation is likely not restricted to the cathode and electrolyte interface.