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Phylogeography of Scarabaeus (Pachysoma) Macleay (Scarabaeidae: Scarabaeinae)Sole, Catherine L. 30 January 2006 (has links)
Scarabaeus (Pachysoma) consists of 13 flightless dung beetle species endemic to the arid west coast of southern Africa. Scarabaeus (Pachysoma) are unique in their feeding and foraging habits, in that they randomly search for dry dung/detritus which, when found, is dragged forwards, and buried in a pre-constructed holding chamber, as opposed to the convention of rolling it backwards. This action is repeated to provision the chamber after which the nest is expanded to below the moisture line to allow the stored food to re-hydrate. Poor vagility, taxonomic contention - seen in Scarabaeus taxonomy - and conservation concern, made Scarabaeus (Pachysoma) an ideal group of beetles to study both the phylogenetics and potential influences that anthropogenic and environmental changes have had on structuring the species and populations thereof. Both molecular and morphological data were used as individual datasets and combined in a total evidence approach. Biogeographic inferences were made based on recent detailed Namib biogeography and the ages of the species were estimated using the molecular clock method. A phylogeographic study was done on three of the species of Scarabaeus (Pachysoma) – S. (P.) hippocrates, S. (P.) gariepinus and S. (P.) denticollis - that had previously shown south-north morphological clinal variation. Lastly, an attempt was made to isolate microsatellite loci for Scarabaeus, in the hope of characterising genetic diversity within and between populations of the same species. Scarabaeus (Pachysoma) was found to be monophyletic within Scarabaeus and was therefore classified as a derived subgenus thereof. Morphologically Scarabaeus (Pachysoma) was shown to have 13 species while at a molecular level strong resolution for 11 of the 13 was obtained. S. (P.) hippocrates and S. (P.) glentoni formed a species complex the hippocrates/glentoni complex. The combined phylogenetic tree showed good overall support for all 13 species. Both the morphological and molecular data partition phylogenies show congruence with the combined phylogeny, lending support for combining datasets. Scarabaeus (Pachysoma) appears to have arisen 2.9 million years ago. The formation of advective fog is a consistent water source for Desert dwelling organisms and appears to be associated with Scarabaeus (Pachysoma) radiation into inhospitable areas. Analysis of gene flow revealed large amounts of south-north movement, lending support for movement of psammophilous taxa with their substratum, the barchan dune. Population demographics of the three species, S. (P.) hippocrates, S. (P.) gariepinus and S. (P.) denticollis, chosen for this study differed greatly except in areas of geographic similarity. Major rivers appear to have acted as gene barriers, allowing for distinct genetic entities to be identified within the three species. Phylogeographic partitioning was supported by an AMOVA analysis. All three species were shown to have undergone historical population expansion dating back to the Pleistocene era. Nested Clade Analysis indicated that allopatric speciation; isolation by distance and continuous range expansion could be the factors having affected overall population structure. Recent events show that human induced factors, environmental barriers and reduced vagility have influenced the species population structure. Four potentially polymorphic loci were isolated for Scarabaeus using the FIASCO protocol. Identification of at least one additional locus is needed in order to obtain statistical significance for future studies directed at uncovering recent population dynamics. / Thesis (PhD (Entomology))--University of Pretoria, 2007. / Zoology and Entomology / unrestricted
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‘Allelofertile’ soil islands self-conditioned by Welwitschia mirabilis in the Namib DesertShabaan, Dalia H. 07 1900 (has links)
Under the extreme arid conditions of deserts, long periods of drought, nutrient-poor soils and high temperatures severely challenge the primary productivity of the ecosystem. Desert plants have evolved morphological and physiological adaptations against abiotic stresses. Along with these adaptation strategies they can recondition their surrounding soil, which will result in the enrichment of nutrients and moisture in the soil surrounding the plant. Although such self-fertilization may support the growth of other sympatric plant species under the plant, competitive exclusion mechanisms (i.e., allelopathy) reduce this possibility. Consequently, this will affect the diversity and functionality of the edaphic microbial communities. I hypothesize that desert xerophytes recondition the soils surrounding their body along with combining the ‘fertility’ and ‘allelopathy’ mechanisms to create a favorable new niche in desert ecosystem. I tested this hypothesis on the soil reconditioned by Welwitschia mirabilis growing in its native environment, the Namib Desert, Namibia. The collected soils were first used to confirm that Welwitschia manipulates the surrounding soil creating a ‘fertile’ but ‘exclusive’ soil area around the plant. Along with evaluating the effect of the reconditioned soil on the germination and plant development under normal irrigation and controlled drought condition, using barley as phytometer. The physio-chemical (i.e., WHC and WP) and microbial community analyses demonstrate that W. mirabilis reconditions the surrounding soil creating an environmental gradient around itself, in which the fertility is increased, through the accumulation and incorporation of shed reproductive parts of the plants (i.e., cones) in the surrounding soil, that will stimulate the plant growth under drought stress. Along with the fertilization effect, soil reconditioning also favor the antagonist effect (i.e., allelopathy) against plant competitors (e.g., new germinating seeds) to protect its ecological niche. Furthermore, the microorganisms and/or soluble/thermolabile molecules contribute to the allelopathic effect activated by the soil-reconditioning around W. mirabilis. The interactions among W. mirabilis, soil and microbes highlight an adaptive strategy that combines soil fertilization and allelopathy that I defined as “Alleolofertility” strategy. This allelofertility island surrounding the W. mirabilis may contributes to explain the evolutionary success of such a ‘living fossil’.
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The Contributions of Soil Moisture and Groundwater to Non-Rainfall Water Formation in the Namib DesertAdhikari, Bishwodeep 08 1900 (has links)
Indiana University-Purdue University Indianapolis (IUPUI) / Non-rainfall waters such as fog and dew are considered as important source of water in drylands, and the knowledge of possible sources of its formation is very important to make future predictions. Prior studies have suggested the presence of radiation fog in drylands; however, its formation mechanism still remains unclear. There have been earlier studies on the effects of fog on soil moisture dynamics and groundwater recharge. On the contrary, no research has yet been conducted to understand the contribution of soil moisture and groundwater to fog formation. This study, therefore, for the first time intends to examine such possibility in a fog-dominated dryland ecosystem, the Namib Desert. The study was conducted at three sites representing two different land forms (sand dunes and gravel plains) in the Namib Desert. This thesis is divided into two parts: the first part examines evidences of fog formation through water vapor movement using field observations, and the second part simulates water vapor transport using HYDRUS-1D model. In the first part of the study, soil moisture, soil temperature and air temperature data were analyzed, and the relationships between these variables were taken as one of the key indicators for the linkage between soil water and fog formation. The analysis showed that increase in soil moisture generally corresponds to similar increase in air or soil temperature near the soil surface, which implied that variation in soil moisture might be the result of water vapor movement (evaporated soil moisture or groundwater) from lower depths to the soil surface. In the second part of the study, surface fluxes of water vapor were simulated using the HYDRUS-1D model to explore whether the available surface flux was sufficient to support fog formation. The actual surface flux and cumulative evaporation obtained from the model showed positive surface fluxes of water vapor. Based on the field observations and the HYDRUS-1D model results, it can be concluded that water vapor from soil layers and groundwater is transported through the vadose zone to the surface and this water vapor likely contributes to the formation of non-rainfall waters in fog-dominated drylands, like the Namib Desert.
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Factors affecting VA-mycorrhizal community structure in the Namib Dune Field: and the population biology of an ectomycorrhizal Basidiomycete: Suillus granulatusJacobson, Kathryn M. January 1992 (has links)
Specific questions regarding the community structure of VAmycorrhizal fungi and the population biology of an ectomycorrhizal addressed. The Basidiomycete, distributional Suillus granulatus, were ecology of VAM fungal communities with grasses was studied across a climatic gradient in the hyper-arid central Namib dune field. VAM fungal communities were primarily structured by substrate stability and moisture availability. Five VAM species were found throughout the study area and were not host specific. Percent mycorrhizal colonization was correlated with moisture availability, whereas spore abundance was correlated with substrate stability. Moisture availability was the key factor influencing VAM fungal phenology: growth, assessed as increased colonization of roots, continued as long as moisture was available, and spore production occurred in response to declining moisture availability. While abiotic factors determine community structure of VAM fungi in the Namib dune field, preliminary studies suggest that the phytobiont mediates fungal response to these abiotic factors. Genetic analyses of S. granulatus single spore isolates using RAPD markers showed that a post-meiotic mitosis in the basidium produces heterokaryotic spores. Secondary homothallism provides an effective means for long distance dispersal, and may account for the broad geographic range of this ectomycorrhizal fungus. Secondary homothallism contributed to the failure of somatic incompatibility tests to delineate the spatial distribution of individuals in a natural population of s. granulatus. Analysis of genetic relatedness using RAPD markers demonstrated conclusively that somatically compatible individuals were not necessarily genetically identical. I concluded that RAPD marker analysis provides a more effective means for determining clonal distribution in ectomycorrhizal populations, than does somatic incompatibility testing. / Ph. D.
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A computational fluid dynamics study of the near surface wind patterns over a desert dune and the effect on seed dispersionJoubert, Eugene Christiaan 03 1900 (has links)
Thesis (MScEng)--Stellenbosch University, 2010. / ENGLISH ABSTRACT: This project originated when a team of scientists at the Gobabeb training and research and centre
observed seed accumulation sites on the slope of sand dunes in the Namib Desert. Seeds that
accumulate on the slip face of a sand dune provide food for small desert creatures that in turn
attract larger animals, resulting in a small ecosystem on the side of the dune. Since wind is the
primary transport of seeds throughout the Namib Desert it is of interest to investigate wind
patterns over the dune. In this project it is therefore desired to look at seed dynamics and
deposition as a result of near surface wind patterns around a three-dimensional dune geometry
using computational fluid dynamics. The project is a joint venture between the University of
Stellenbosch and the University of Namibia. This document presents the South African MScEng
thesis part.
The literature review shows the dominant winds in the Namib Desert to be from the south to
westerly direction. Previous studies on air flow over dunes focussed on sand movement and were
often limited to simplified two-dimensional geometries and steady state simulations. From these
studies the basic flow features associated with dunes can be identified. Lastly, factors that
influence particle dynamics around dune geometries are looked at. These particle studies mostly
involve the movement of sand rather than seeds but still provide valuable insight.
The project methodology is explained and includes the equipment used, the considerations taken
into account, the simplifications made as well as the procedure followed when conducting field
work and simulations. A section of an actual Namibian linear dune is mapped in order to obtain
a geometry for the simulations. Flow measurements are carried out with a wind mast to obtain
velocity profile inlet conditions for the simulations. Furthermore, seed sampling is done by the
collaborating Namibian team of which the data is used to obtain an effective seed particle model.
Lastly, simulations are carried out using primarily OpenFOAM-1.5. The simulations look at
general near surface wind patterns, time dependant flow features and particle movement and seed
deposition around and on the linear dune.
The results show different wind profiles for different wind direction. It is also possible to see
how the profile changes as the flow accelerates up the dune slope. Two-dimensional results
provide the opportunity to compare results with previous studies as well as to provide the basis
for looking at aspects such as differencing schemes, turbulence models and parallel computing
before three-dimensional simulations are carried out. The importance of higher order
differencing schemes are confirmed in the two-dimensional results. The turbulence models,
however, produce very similar results. The results from the two- and three-dimensional results
show typical flow features associated with dunes. Transient flow features and separation vortex
structures can be identified from time dependant simulations. Furthermore, particle simulations
reveal how particles tend to be trapped in the recirculation regions.
The conclusions explain how the project objectives were achieved and provide recommendations
for future studies related to this project. / AFRIKAANSE OPSOMMING: Die projek het ontstaan toe naforsers areas van saad akumulasie op die hellings van duine in
Namibë opgelet het. Hierdie akumulasie van plant materiaal verskaf die voedsel vir klein diere
op die duin wat ‘n klein ekosisteem tot gevolg het. Aaangesien die primêre vervoermiddel vir
sade in die woestyn wind is beoog die projek om deur die wind patrone oor die duin beter te
verstaan die saad verspreiding te beskryf. Die doel is dus om saad verspreiding en akumulasie te
beskryf deur die wind patrone te bekyk wat die verspreiding tot gevolg het deur gebruik te maak
van numeriese vloei dinamika. Die projek is ‘n saamgestelde projek tussen die Universiteit van
Stellenbosch en die Universiteit van Namibië. Hierdie dokument behels die Suid Afrikaanse
MScIng gedeelte van die projek.
Deur die hersiening van literatuur word daar gesien dat die domineerende wind rigtings as suid
tot wes beskryf kan word. Vorige studies wat verband hou met wind vloei oor duine wys dat die
meeste op twee-dimensionele eenvoudige geometrië gefokus het met tyd onafhankike simulasies.
Dit is egter moontlik om die resultate te gebruik om karakteristieke vloei patrone te identifiseer
wat met duin wind patrone geassosieer kan word. Laastens word daar gekyk na die faktore wat
partikel beweeging beïnvloed, maar hierdie studies sluit hoofsaaklik sand partikels in eerder as
sade.
Die motodologie beskryf die toerusting, oorwegings en prosedures wat gevolg is tydens veld
werk asook simulasies. Tydens die veld werk is ‘n gedeelte van ‘n Namib lineêre duin gemeet en
so gebruik om ‘n geometrie te maak wat vir simulasie doeleindes gebruik kan word. Daar is ook
wind meetings gedoen met ‘n wind mas om wind profiele vir inlaat kondisies vir die simulasies te
kry. Verder het saad bestudeering die nodige data verskaf om ‘n voledige saad partikel model op
te stel wat in die simulasies gebruik kan word. Laastens kyk die simulasies veral na algemene
vloei patrone, tyd afhanklike vloei effekte en ook partikel beweging in die vloei veld.
Die resultate wys hoe wind profiele verskil wat van verskillende rigtings af waai. Dit is ook
moontlik on te wys hoe die wind profiele verander soos die wind versnel teen die duin op. Tweedimensionele
simulasies verskaf die geleentheid om te kyk na die effek van verkillende
numeriese modelle, turbulensie modelle en ook multi-prosesseerder verwerking. Tydens die
twee-dimensionele simulasies is die belangrikheid van hoër orde numeriese metodes besef. Die
verkillende turbulensie modelle het egter klein verkille gewys. Alby die twee- en driedimensionele
resultate wys karakteristieke vloei patrone wat met duine geasosieer kan word.
Verder het tyd afhanklike simulasies gewys hoe wind patrone verander met tyd. Die partikel
simulasies wys ook die beweging van partikels deur die wind en hoe dit neig om te akumuleer in
die hersirkulasie gebied agter die duin.
Die gevolgtrekkings wys dat al die doelstellings bereik is en maak voorstelle vir toekomstige
studies wat met hierdie studie verband hou.
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Physiological response of the succulent Augea capensis (Zygophyllaceae) of the southern Namib desert to SO2 and drought stress / J.W. SwanepoelSwanepoel, Jacoba Wilhelmina January 2006 (has links)
The main aim of this study was to investigate the effects of water availability and SO2
pollution, imposed separately or simultaneously, on the photosynthetic metabolism of
Augea capensis Thunb., a succulent of the Namib Desert in the region of Skorpion
Zinc mine, Namibia. The main driver for this investigation was the need to distinguish
between the effects of water availability on plants native to a desert environment,
where water availability dominates plant response, but where the possibility of
anthropogenic SO2 pollution poses a new threat to the unique succulent vegetation.
Fifteen measuring sites were selected in the vicinity of the mine to determine how
rainfall influenced the physiological status of the vegetation. Chlorophyll a
fluorescence measurements, and analysis of recorded OJlP fluorescence transients
with the JIP-test, were used for this purpose. A series of laboratory experiments were
also conducted on A. capensis to determine the precise physiological response that
water deprivation and SO2 pollution had under controlled growth conditions. Potted
plants were exposed to water deprivation or SO2 fumigation in the light or dark.
Besides chlorophyll a fluorescence, photosynthetic gas exchange and Rubisco
activity were also measured.
Changes in fast fluorescence rise kinetics observed under field conditions suggest
considerable modulation of photosystem II function by rainfall with concomitant
involvement of a heat stress component as well. In both the field and laboratory
experiments, one of the JIP-test parameters, the so-called performance index (PIABS),
was identified as a very sensitive indicator of the physiological status of the test
plants. Moreover, under laboratory conditions, a good correlation existed between the
water deprivation-induced decline in CO2 assimilation rates and the decline in PIABS
values. The JIP-test in general, and the PIABS in particular, shows considerable
potential for application in the investigation of water availability influences on desert
ecosystems. In the laboratory experiments, water deprivation caused stomatal
closure but also a slight elevation in intercellular C02 concentration and inhibition of
Rubisco activity, suggesting that mesophyll limitation was the dominant factor
contributing to the decrease in C02 assimilation rates. Following re-watering, A.
capensis showed remarkable recovery capacity.
Fumigation of A. capensis with 1.2 ppm SO2 in the dark or light revealed relatively
small effects on C02 assimilation. The inhibitory effects on photosynthesis were also
fully reversible, indicating no permanent metabolic/structural damage. The effects on
photosynthesis were more pronounced when fumigation occurred in the dark. This
phenomenon might be related to diurnal differences in cellular capacity for SO2
detoxification. When long-term moderate water deprivation was combined with
simultaneous SO2 fumigation, there was no additional inhibitory effect on
photosynthesis. These findings suggest that water deprivation do not increase
sensitivity towards SO2 pollution in A. capensis. Fumigation with SO2, singly or in
combination with water deprivation also had no major effect on chloroplast
ultrastructure. It appears that A. capensis is remarkably resistant to SO2 pollution
even in the presence of low water availability, which is a common phenomenon in
desert ecosystems.
Since A, capensis seems to be highly tolerant to S02, its suitability as an indicator
species for the detection of SO2 pollution effects at Skorpion Zinc mine is
questionable. Because water availability dominates the physiological/biochemical
response in this species, subtle SO2 pollution effects might be difficult to detect
against this dominant background. The high water content of A. capensis and similar
succulents might act as a substantial sink for SO2 and could convey considerable
tolerance against this form of air pollution. / Thesis (M.Sc. (Botany))--North-West University, Potchefstroom Campus, 2006.
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50,000 years of vegetation and climate change in the Namib Desert / Changement du climat et de la végétation dans le Désert du Namib au cours des 50 000 dernières annéesLim, Sophak 24 November 2017 (has links)
Cette thèse présente les données des pollens et micro-charbons fossiles couvrant la période des 50 000 dernières années à partir de sites sélectionnés transversalement nord-sud du désert de Namib. Dans le cadre de cette thèse, on utilise le rock hyrax middens, l’accumulation des boulettes et des urines fossilisés du Procavia capensis, représentant une excellente archive pour archives pour la préservation des pollens et micro-charbons à long-terme. Trois sites des hyrax middens ont été sélectionnés pour l'analyse: au sud du désert de Namib (Pella), la marge est des dunes de sable de Namib (Zizou) et le centre de la Namib (Spitzkoppe). En plus, le régime pluvial de ces sites se caractérise par une forte variabilité annuelle et interannuelle. En conséquence, tous ces sites se situent au long de l’écotone du Désert et du biome Nama-Karoo, ainsi qu'à l’est (biome de Savane). Alors que ces sites sont répertoriés dans des écosystèmes similaires, l’écotone, lui, est considéré comme une zone potentiellement très sensible au changement du système climatique régional. Un intérêt spécifique de ces enregistrements terrestres est pour évaluer s’ils corroborent ou s’opposent avec les résultats provenant ceux des sédiments marins de la côte namibienne, en particulier la conclusion : l’abondance des taxa dominants du Fynbos Biome du Cape peut indiquer significativement une expansion vers le nord de la flore du Cape pendant les périodes plus froides glaciaires. Selon les sites d’études sélectionnées, les conclusions principales de ce travail sont les suivantes:Les hyrax middens de Pella fournissent le premier enregistrement pollinique continué au sud du désert de Namib durant la période des 50 000 dernières années. Ces données polliniques ont permis de reconstruire le changement de la végétation et d'estimer la température et l'aridité. Les résultats indiquent que la période glaciaire se caractérise par une augmentation de la disponibilité de l'eau sur le site par rapport à l'Holocène. Les changements de la température et de l'évapotranspiration potentielle semblent avoir joué un rôle important dans la détermination de l'équilibre hydrologique.L'enregistrement de Zizou hyrax midden met en évidence des changements de la végétation à la marge l'est des dunes de sable depuis 38 000 ans cal BP. La végétation de la période glaciaire se caractérise par les pourcentages relativement élevés des Astéracées pollen, et plus particulièrement par des taxa du climat plus froid: Stoebe et Artemisia¬-type. En accord avec les données de Pella, le réchauffement au début de l'Holocène indiqué par la dominance de pollen des graminées dans l'assemblage pollinique suggère une expansion du biome de Désert.Les hyrax middens de Spitzkoppe enregistrent les changements de la végétation dans le centre du désert de Namib au cours des 32 000 dernières années. Les résultats sont globalement cohérents en comparant aux autres enregistrements terrestres dans la région. L'analyse de ces données n'est cependant pas encore terminée.Dans tous ces sites, une variabilité significative a été observée à la fois dans la dernière période glaciaire et l'Holocène. Les conditions plus froides de l'ère glaciaire semblent être caractérisées par une augmentation de la disponibilité de l'eau le long de la totalité de notre zone d'étude. Au contraire des résultats provenant des carottes marines, nos enregistrements indiquent aucune expansion de la végétation de Fynbos biome, et seulement des traces de Restionaceae pollen dans le site extrêmement au sud à Pella (pas plus de 1%), mais aucun trace de ce pollen n'ayant été observé à Zizou ainsi qu’à Spitzkoppe. / This thesis presents fossil pollen and microcharcoal data during the last 50,000 years from a north-south transect of the Namib Desert. The arid environment of the Namib precludes the development of permanent wetlands, and as a result few palaeoenvironmental records exist from the region. In this study, we employ rock hyrax middens – fossilised accumulations of the faecal pellets and urine of the Procavia capensis. Hyrax middens from three sites were selected for analysis: the southern Namib (Pella), the eastern margin of Namib Sand Sea (Zizou), and the central Namib (Spitzkoppe). The results from these terrestrial sites are the extent to which they may corroborate or conflict with findings from pollen records obtained from marine sediments of the Namibian coast.The Pella hyrax middens provide the first continuous pollen record from the southern Namib Desert since the last 50,000 years, and are used to reconstruct vegetation change and quantitative estimates of temperature and aridity. Results indicate that the last glacial period was characterised by increased water availability relative to the Holocene. Changes in temperature and potential evapotranspiration appear to have played a significant role in determining the hydrologic balance. The record can be considered in two sections: 1) the last glacial period, when low temperatures favoured the development of more mesic Nama-Karoo vegetation at the site, with periods of increased humidity concurrent with increased coastal upwelling, both responding to lower global/regional temperatures; and 2) the Holocene, high temperatures and potential evapotranspiration resulted in increased aridity and an expansion of the Desert Biome.Considered in the context of discussions of forcing mechanisms of regional climate change and environmental dynamics, the results from Pella stand in clear contrast with many inferences of terrestrial environmental change derived from regional marine records. Observations of a strong precessional signal and interpretations of increased humidity during phases of high local summer insolation in the marine records are not consistent with the data from Pella. Similarly, while high percentages of Restionaceae pollen has been observed in marine sediments during the last glacial period, they do not exceed 1% of the assemblage from Pella, indicating that no significant expansion of the Fynbos Biome has occurred during the last 50,000 years.The Zizou hyrax midden highlights vegetation changes on the eastern margin of the Namib Sand Sea since 38,000 cal BP. Results show the different vegetation compositions between the last glacial period and the Holocene. Glacial vegetation characterised with relatively high percentages of Asteraceae pollen, particularly cool climate taxa such as Stoebe and Artemisia types. Similar to the data from Pella, with the onset of Holocene warming grass pollen comes to dominate the assemblage, suggesting an expansion of the Desert Biome. We suggest that the climate during the last glacial period was more humid, and supported the development of shrubs/small trees. Arid conditions during the Holocene saw the depletion of this resource, and the development of grasslands that could exploit the rare rains that the region experiences today. In common with the Pella record, no elements of the Cape flora are found in the Zizou middens.The Spitzkoppe hyrax middens record vegetation changes in the central Namib during the last 32,000 years. The last glacial vegetation compositions composed of Olea, Artemisia¬-type, Stoebe¬-type and grasses. In the Holocene, the arboreal taxa such as Olea was replaced by others like Eculea, Dombeya, Commiphora, and Croton¬-type with relative higher percentage of grasses at early Holocene.
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Physiological response of the succulent Augea capensis (Zygophyllaceae) of the southern Namib desert to SO2 and drought stress / J.W. SwanepoelSwanepoel, Jacoba Wilhelmina January 2006 (has links)
The main aim of this study was to investigate the effects of water availability and SO2
pollution, imposed separately or simultaneously, on the photosynthetic metabolism of
Augea capensis Thunb., a succulent of the Namib Desert in the region of Skorpion
Zinc mine, Namibia. The main driver for this investigation was the need to distinguish
between the effects of water availability on plants native to a desert environment,
where water availability dominates plant response, but where the possibility of
anthropogenic SO2 pollution poses a new threat to the unique succulent vegetation.
Fifteen measuring sites were selected in the vicinity of the mine to determine how
rainfall influenced the physiological status of the vegetation. Chlorophyll a
fluorescence measurements, and analysis of recorded OJlP fluorescence transients
with the JIP-test, were used for this purpose. A series of laboratory experiments were
also conducted on A. capensis to determine the precise physiological response that
water deprivation and SO2 pollution had under controlled growth conditions. Potted
plants were exposed to water deprivation or SO2 fumigation in the light or dark.
Besides chlorophyll a fluorescence, photosynthetic gas exchange and Rubisco
activity were also measured.
Changes in fast fluorescence rise kinetics observed under field conditions suggest
considerable modulation of photosystem II function by rainfall with concomitant
involvement of a heat stress component as well. In both the field and laboratory
experiments, one of the JIP-test parameters, the so-called performance index (PIABS),
was identified as a very sensitive indicator of the physiological status of the test
plants. Moreover, under laboratory conditions, a good correlation existed between the
water deprivation-induced decline in CO2 assimilation rates and the decline in PIABS
values. The JIP-test in general, and the PIABS in particular, shows considerable
potential for application in the investigation of water availability influences on desert
ecosystems. In the laboratory experiments, water deprivation caused stomatal
closure but also a slight elevation in intercellular C02 concentration and inhibition of
Rubisco activity, suggesting that mesophyll limitation was the dominant factor
contributing to the decrease in C02 assimilation rates. Following re-watering, A.
capensis showed remarkable recovery capacity.
Fumigation of A. capensis with 1.2 ppm SO2 in the dark or light revealed relatively
small effects on C02 assimilation. The inhibitory effects on photosynthesis were also
fully reversible, indicating no permanent metabolic/structural damage. The effects on
photosynthesis were more pronounced when fumigation occurred in the dark. This
phenomenon might be related to diurnal differences in cellular capacity for SO2
detoxification. When long-term moderate water deprivation was combined with
simultaneous SO2 fumigation, there was no additional inhibitory effect on
photosynthesis. These findings suggest that water deprivation do not increase
sensitivity towards SO2 pollution in A. capensis. Fumigation with SO2, singly or in
combination with water deprivation also had no major effect on chloroplast
ultrastructure. It appears that A. capensis is remarkably resistant to SO2 pollution
even in the presence of low water availability, which is a common phenomenon in
desert ecosystems.
Since A, capensis seems to be highly tolerant to S02, its suitability as an indicator
species for the detection of SO2 pollution effects at Skorpion Zinc mine is
questionable. Because water availability dominates the physiological/biochemical
response in this species, subtle SO2 pollution effects might be difficult to detect
against this dominant background. The high water content of A. capensis and similar
succulents might act as a substantial sink for SO2 and could convey considerable
tolerance against this form of air pollution. / Thesis (M.Sc. (Botany))--North-West University, Potchefstroom Campus, 2006.
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