Doctor of Philosophy / Department of Chemistry / Christine M. Aikens / This body of work describes a theoretical study of the growth mechanism of gold thiolate nanoparticles from Au(III) as synthesized in the Brust-Schiffrin method. The Au(III) salt can be reduced to form Au(I) by two thiols or a hydride. Depending on the polarity of the solvent, the Au(I) species will either yield rings and anionic chains, remain in isolation, or create an ionic complex with the phase transfer agent. No matter what form the Au(I) species takes, a second reduction must occur to yield Au(0). If the solvent is polar, such as methanol or water, and the Au(I) species is a ring or anionic chain, then a hydride can reduce the structure and create a gold-gold bond and dissociate a thiol from the structure. The gold atoms involved in the gold-gold bond would have a formal Au(0) oxidation state. However if the Au(I) species can be kept from forming rings or chains in the polar solvent or if the system is in a nonpolar solvent, then two Au(I) species in close proximity in the presence of hydride can react to yield a non-radical Au(0) species. The oxidation of bare gold nanoclusters by thiol will also be examined, such as in the case of SMAD-produced gold nanoparticles. In this process, the gold nanoclusters are initially in the Au(0) oxidation state. However the SR-Au-SR “staple” motifs that are known to passivate gold nanoparticles contain Au(I) species. The adsorption of thiol on various sizes of gold clusters in several charge states will be calculated and the mechanism for the oxidation of Au3 and three-dimensional Au12 will be modeled. The rate-limiting step is found to be the thiol hydrogen dissociation onto the gold cluster. Once this dissociation occurs, the hydrogen can move freely around the surface. Finally, Au25(SH)18- will be investigated as a catalyst for selective hydrogenation of α,β-unsaturated aldehyde. The dependence of the energetics of hydrogen gas dissociation on Au25(SH)18- on the functional and Grimme dispersion correction employed will also be examined.

Doctor of Philosophy / Department of Chemistry / Jun Li / A lot of materials exhibit novel properties when scaled down to nanoscale. Here we explore nanoelectrode arrays (NEAs) and nanoparticles in the application of high performance biosensors. We have developed an electrochemical (EC) method for measuring the activity of proteases using vertically aligned carbon nanofiber (VACNF) NEAs. VACNFs were grown on conductive substrates and encapsulated in SiO₂ matrix. After polishing and plasma etching, controlled VACNF tips are exposed to form an embedded NEA. Tetrapeptides specific to cancer-mediated proteases are covalently attached to the exposed tip, with a ferrocene (Fc) moiety linked at the distal end. The redox signal of Fc can be measured with AC voltammetry (ACV) at ~1 kHz frequency, showing distinct properties from macro-electrodes due to VACNF's unique interior structure. The enhanced ACV properties enable the kinetic measurements of proteolytic cleavage of the surface-attached tetrapeptides by proteases. The well-defined regular VACNF NEAs by e-beam lithography show a much faster kinetics for cathepsin B proteolysis. This EC method was further applied in whole lysate of human breast tissue and breast cells. The detected protease activity was found increased in cancer cells, with the metastatic cancer cell lysate showing the highest cathepsin B activity. The results indicated the potential of this technique as a portable multiplex electronic device for cancer diagnosis and treatment monitoring through rapid profiling of the activity of specific cancer-relevant proteases. In another exploratory study, we modified nanoparticles with luminol and viral nucleic acid to develop chemiluminescence (CL) biosensors for blood-borne pathogens. Luminol-labeled 10-nm-diameter gold nanoparticles (GNPs) served as a nanocarrier for enhancing CL signal. The CL signal can be observed over 8 orders of magnitude variations in GNP concentration. Using the same number of particles, luminol-labeled 30-nm-diameter latex beads showed ~3 orders of magnitude higher CL compared to 10-nm-diameter GNPs. Hybridization of target H1N1 nucleic acid on the latex beads and probe nucleic acid on the glass or optical fiber surface has been achieved. This assay will be incorporated into a simple hand-held device for routine assays in hospitals and clinics, or for large-scale screening of human populations as diagnostic tools to identify specific viral strains.

Doctor of Philosophy / Department of Chemistry / Christine M. Aikens / Small silver and gold clusters (less than 2 nm) display a discrete absorption spectrum characteristic of molecular systems whereas larger particles display a strong, broad absorption band in the visible. The latter feature is due to the surface plasmon resonance, which is commonly explained by the collective dipolar motion of free electrons across the particle, creating charged surface states. The evolution between molecular properties and plasmon is investigated. Time-dependent density functional theory (TDDFT) calculations are performed to study the absorption spectrum of cluster-size silver and gold nanorods. The absorption spectrum of these silver nanorods exhibits high-intensity longitudinal and transverse modes (along the long and short axis of the nanorod respectively), similar to the plasmons observed experimentally for larger nanoparticles. These plasmon modes result from a constructive addition of the dipole moments of nearly degenerate single-particle excitations. The number of single-particle transitions involved increases with increasing system size, due to the growing density of states available. Gold nanorods exhibit a broader absorption spectrum than their silver counterpart due to enhanced relativistic effects, affecting the onset of the longitudinal plasmon mode. The high-energy, high-intensity beta-peak of acenes also results from a constructive addition of single-particle transitions and I show that it can be assigned to a plasmon. I also show that the plasmon modes of both acenes and metallic nanoparticles can be described with a simple configuration interaction (CI) interpretation. The evolution between molecular absorption spectrum and plasmon is also investigated by computing the density of states of spherical thiolate-protected gold clusters using a charge-perturbed particle-in-a-sphere model. The electronic structure obtained with this model gives good qualitative agreement with DFT calculations at a fraction of the cost. The progressive increase of the density of states with particle size observed is in accordance with the appearance of a plasmon peak. The optical properties of nanoparticles can be tuned by varying their composition. Therefore, the optical behavior of the bimetallic Au[subscript](25-n)Ag[subscript]n(SH)[subscript]18[superscript]- cluster for different values of n using TDDFT is analyzed. A large blue shift of the HOMO-LUMO absorption peak is observed with increasing silver content, in accordance with experimental results.

Master of Science / Department of Chemistry / Emily McLaurin / Cu-doped ZnSe/CdSe core/shell nanocrystals were synthesized using the growth doping method. Upon shell growth, the nanocrystals exhibit dual emission. The green luminescence peak is assigned as band edge emission and the broad, lower energy red peak is due to Cu dopant. Although, the oxidation state of Cu in the nanocrystals is debated, the emission is explained as recombination of a hole related to Cu²⁺ with an electron from the conduction band. The emission changed in the presence of dodecanethiol. Generally, the band edge emission intensity decreases and the Cu emission intensity increases. One explanation is the thiol acts as a hole trap, preventing hole transfer to the conduction band. Samples were obtained with varying amounts of Cd²⁺. In the presence of larger amounts of Cd²⁺, the nanocrystals had “thicker shells”, and both the band edge and Cu emission were less sensitive to thiol. The sensitivity likely decreased because the shelled, larger nanocrystals have fewer surface defects resulting in more available electrons.

Master of Science / Department of Mechanical and Nuclear Engineering / Gurpreet Singh / Graphene because of its unique electrical (electron mobility = 2 x 10[superscript]5 cm[superscript]2 V[superscript]-1 s[superscript]-1), mechanical (E = 1 TPa), optical, thermal and chemical properties has generated a lot of interest among the research community in recent years. One of the most notable methods of synthesizing large area pristine graphene sheets, which are several 100 micrometers wide, is through thermal chemical vapor deposition (CVD). But very little has been known about the effects of heating and cooling rate of the substrate on the quality of graphene produced. Hence we varied various growth parameters to understand the process of graphene growth on Cu and Ni substrates when subjected to fast heating and quenching. This allowed optimization of the CVD process to achieve large-area graphene films consistently and repeatedly. This work provides new insights on synthesis of graphene at atmospheric pressures and the effect of (a) fast heating and fast cooling of substrates, (b) catalyst type and (c) gas flow rates on quality of the graphene produced. A carbon nanotube CVD furnace was restored and modified to accommodate graphene synthesis. We started with synthesis of graphene on Cu substrate following procedures already available in the literature (heating rate ~ 15 °C/min and cooling rate ~ 5 °C/min; total processing time 7 hours). This provided a good reference point for the particular furnace and the test setup. The best results were obtained for 15 minutes of growth at a CH4:H2 ratio of 1:30 at 950 °C. SEM images showed full coverage of the substrate by few layer graphene (FLG), which was indicated by the relatively high I[subscript]2D/I[subscript]G ratio of 0.44. The furnace was further modified to facilitate fast cooling (~4 °C/sec) of substrate while still being in inert atmosphere (Argon). The effect of growth time and concentration of CH[subscript]4 was studied for this modified procedure (at H[subscript]2 flow rate of 300 SCCM). SEM images showed full coverage for a CH[subscript]4 flow rate of 10 SCCM in as little as 6 minutes of growth time. This coupled with the fast cooling cycle effectively reduced the overall time of graphene synthesis by 7 times. The I[subscript]2D/I[subscript]G ratio in Raman spectrum was 0.4 indicating that the quality of graphene synthesized was similar to that obtained in conventional CVD. This modification also facilitated introduction of catalyst substrate after the furnace has reached growth temperature (fast heating ~8 °C/sec). Hence, the overall time required for graphene synthesis was reduced to ~6 % (30 minutes) when compared to the traditional procedure. SEM images showed formation of high concentration few layer graphene islands. This was attributed to the impurities on the catalyst surface, which in the traditional procedure would have been etched away during the long heating period. The optimum process parameters were 30 minutes of growth with 20 SCCM of CH[subscript]4 and 300 SCCM of H[subscript]2 at 950 °C. The Raman spectrum for this condition showed a relatively high I[subscript]2D/I[subscript]G ratio of 0.66. We also studied the effect of Ni as a catalyst. Similar to Cu, for Ni also, traditional procedure found in the literature was used to optimize the graphene growth for this particular furnace. Best results were obtained for 10 minutes of growth time with 120 SCCM of CH[subscript]4 in 300 SCCM of H[subscript]2 at 950 °C. SEM images showed large grain growth (~50 μm) with full coverage. The Raman spectrum showed formation of bi-layer graphene with a I[subscript]2D/I[subscript]G ratio of 1.03. Later the effect of growth time and concentration of the hydrocarbon precursor for Ni substrate subjected to fast heating (~ 8 °C/sec) was studied. It was found that because the process of graphene synthesis on Ni is by segregation, growth period or gas flow rate had little effect on the quality and size of the graphene sheets because of the presence of impurities on the substrate. This procedure yielded multilayer graphite instead of graphene under all conditions. Future work will involve study of changing several other parameters like type of hydrocarbon precursor and pressure in the chamber for graphene synthesis. Also various other substrates like Cu or Ni based alloys will be studied to identify the behavior of graphene growth using this novel procedure.

Master of Science / Department of Mechanical and Nuclear Engineering / Steven J. Eckels / NanoActiveTM metal oxide particles have the ability to destructively adsorb organophosphorus compounds and chlorocarbons. These nanomaterials with unique surface morphologies are subjected to separate, low concentrations of gaseous ammonia in air. NanoActiveTM materials based on magnesium oxide have large specific surface areas and defective sites that enhance surface reactivity and consequently improved adsorptivity. In gas contaminant removal by adsorption, presence of vast specific surface area is essential for effective gas-solid interaction to take place. This is also the case in many industrial and chemical applications such as purification of gases, separation and recovery of gases, catalysis etc,. Typically carbonaceous compounds are utilized and engineered in toxic gas control systems. The purpose of this study was to compare NanoActiveTM materials with carbon based compounds in the effectivity of toxic gas adsorption at low concentrations. A test facility was designed to investigate the adsorption properties of novel materials such as adorption capacity and adsorption rate. Adsorption capacity along with adsorption kinetics is a function of properties of the adsorbent and the adsorbate as well as experimental conditions. Nanomaterials were placed on a silica matrix and tested with increasing flow rates. Electrochemical sensing devices were placed at inlet and outlet of the facility to monitor real time continuous concentration profiles. Breakthrough curves were obtained from the packed bed column experiments and saturation limits of adsorbents were measured. Adsorption rates were obtained from the breakthrough curves using modified Wheeler-Jonas equation. The NanoActiveTM materials adsorbed ammonia though to a lesser extent than the Norit® compounds. This study also included measurement of pressure drop in packed beds. This information is useful in estimating energy losses in packed bed reactors. Brauner Emmet Teller tests were carried out for the calculation of surface area, pore volume and pore size of materials. These calculations suggest surface area alone had no notable influence on adsorption capacity and adsorption rates. This lead to the conclusion that adsorption was insignificant cause of absence of functional groups with affinity towards ammonia. In brief, adsorption of ammonia is possible on NanoActiveTM materials. However functional groups such as oxy-flouro compounds should be doped with novel materials to enhance the surface interactions.

Master of Science / Department of Mechanical & Nuclear Engineering / Gurpreet Singh / Carbon nanotubes (CNT) and polymer-derived ceramics (PDC) have gained considerable research attention due to their unique structure and physical properties. Carbon nanotubes are known for their exceptional mechanical (Young’s modulus= 1 TPa) and thermal properties (thermal conductivity = 4000 W/m.K). However, CNTs tend to lose their unique -sp2 carbon structure and cylindrical geometry at temperatures close 400°C in air. PDC, which are obtained by the controlled degradation of certain organosilicon polymers however exhibit high temperature stability (upto approx. 1400 °C). To this end, a hybrid composite material consisting of PDC functionalized CNT is of interest as it can combine the unique physical properties of the two materials for applications requiring operation under harsh conditions. Here, we report synthesis and chemical characterization of an Al-modified polysilazane polymer, which was later utilized to functionalize the outer surfaces of four commercially available CNTs. This polymer-CNT composite upon heating in nitrogen environment resulted in Si(Al)CN-CNT ceramic composite. The composite was characterized using a variety of spectroscopic methods such Raman, FTIR and electron microscopy. The thermal stability of the ceramic composite was studied by use of Thermogravimetric analysis (TGA) that showed an improvement in the thermal stability compared to bare nanotubes. Further, we also demonstrate that a stable dispersion of the composite in organic solvents such as toluene can be spray coated on a variety of substrates such as copper disks and foils. Such coatings have application in high energy laser power meters. This research opens new avenues for future applications of this novel material as coatings on surfaces that require both good thermal properties and protection against degradation in high temperature environments. We also suggest the future use of this material as an electrode material in high electrochemical capacity rechargeable batteries.

Master of Science / Department of Clinical Sciences / Mary Lynn Higginbotham / Objectives – To isolate and maintain canine Wharton’s jelly mesenchymal stromal cells (WJMSCs) in culture, to determine the effects of micellar nanoparticles containing doxorubicin (DOX) on WJMSCs and canine osteosarcoma (OSA) D17 cell viability, and to determine the effects of conditioned media from WJMSCs loaded with micellar nanoparticles containing DOX on OSA D17 cell viability. Sample Population – Canine WJMSCs containing various concentrations of DOX micelles and canine OSA D17 cells. Procedures – WJMSCs were isolated from canine umbilical cords. Micellar nanoparticles containing DOX were prepared and added to culture plates containing canine OSA D17 cells to determine micelle effects on cell growth and viability. Conditioned media from culture plates containing canine WJMSCs incubated with various DOX micelle concentrations was added to OSA D17 cells for conditioned media experiments. A 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay was performed to assess OSA D17 cell viability. A trypan blue stain was also utilized to perform cell counts to determine the effect of the DOX micelles on stromal cell growth. Results – WJMSCs were successfully isolated and maintained in culture. Micellar nanoparticles containing DOX decreased OSA D17 cell viability. OSA D17 cell viability was also decreased following incubation with conditioned media from canine WJMSCs loaded with micellar nanoparticles containing DOX. Significant decreases with the conditioned media of canine WJMSCs loaded with 10μM micelles occurred at 48 hours (p < 0.005) and at 72 and 96 hours (p < 0.0001). Significant decreases were also observed with the 1 μM DOX micelles at 72 hours (p < 0.005) and 96 hours (p < 0.0001). WJMSC numbers decreased in a dose dependent manner following incubation with DOX micelles. Changes in WJMSC number was not caused by increased cell death as all variables produced similar percentages of dead cells. Conclusions – Canine WJMSCs were successfully isolated and maintained in culture. Stromal cells containing DOX micellar nanoparticles induced OSA D17 cell cytotoxicity while inducing an anti-proliferative, rather than cytotoxic effect, on the WJMSC. These data support future in vivo experiments utilizing canine WJMSCs and micellar nanoparticles.

Doctor of Philosophy / Department of Chemistry / Jun Li / Developing new and rapid methods for pathogen detection with enhanced sensitivity and temporal resolution is critical for protecting general public health and implementing the food and water safety standards. In this research vertically aligned carbon nanofiber nanoelectrode arrays (VACNF NEAs) have been explored as a sample manipulation tool and coupled with fluorescence, surface enhanced Raman scattering (SERS) and impedance techniques for pathogen detection and identification. The key objective for employing a nanoelectrode array is that the nano-Dielectrophoresis (nano-DEP) at the tip of a carbon nanofiber (CNF) acts as a potential trap to capture pathogens. A microfluidic device was fabricated where nanofibers (~ 100 nm in diameter) were placed at the bottom of a fluidic channel to serve as a ‘point array’ while an indium tin oxide coated glass slide acted as a macroscale counter electrode. The electric field gradient was highly enhanced at the tips of the CNFs when an AC voltage was applied. The first study focused on the capture of the viral particles (Bacteriophage T4r) by employing a frequency of 10.0 kHz, a flow velocity of 0.73 mm/sec, and a voltage of 10.0 Vpp. A Lithenburg type of phenomenon was observed, that were drastically different from the isolated spots of bacteria captured on VACNF tips in previous study. At the lowest employed virus concentration (1 × 10[superscript]4 pfu/mL), a capture efficiency of 60% was observed with a fluorescence microscope. The motivation of the second study was to incorporate the SERS detection for specific pathogen identification. Gold-coated iron-oxide nanoovals labeled with Raman Tags (QSY 21), and antibodies that specifically bound with E.coli cells were utilized. The optimum capture was observed at a frequency of 100.0 kHz, a flow velocity of 0.40 mm/sec, and a voltage of 10.0 Vpp. The detection limit was ~210 CFU/mL for a portable Raman system with a capture time of 50 seconds. In the final study, a real-time impedance method was employed to detect Vaccinia virus (human virus) in the nano-DEP device at 1.0 kHz and 8.0 Vpp giving a detection limit of 2.51 × 10[superscript]3 pfu/mL.

Doctor of Philosophy / Department of Physics / Bruce M. Law / Three diverse first author surfaces science experiments conducted by Sean P. McBride 1-3 will be discussed in detail and supplemented by secondary co-author projects by Sean P. McBride, 4-7 all of which rely heavily on the use of an atomic force microscope (AFM). First, the slip length parameter, b of liquids is investigated using colloidal probe AFM. The slip length describes how easily a fluid flows over an interface. The slip length, with its exact origin unknown and dependencies not overwhelming decided upon by the scientific community, remains a controversial topic. Colloidal probe AFM uses a spherical probe attached to a standard AFM imaging tip driven through a liquid. With the force on this colloidal AFM probe known, and using the simplest homologous series of test liquids, many of the suspected causes and dependencies of the slip length demonstrated in the literature can be suppressed or eliminated. This leaves the measurable trends in the slip length attributed only to the systematically varying physical properties of the different liquids. When conducting these experiments, it was realized that the spring constant, k, of the system depends upon the cantilever geometry of the experiment and therefore should be measured in-situ. This means that the k calibration needs to be performed in the same viscous liquid in which the slip experiments are performed. Current in-situ calibrations in viscous fluids are very limited, thus a new in-situ k calibration method was developed for use in viscous fluids. This new method is based upon the residuals, namely, the difference between experimental force-distance data and Vinogradova slip theory. Next, the AFM’s ability to acquire accurate sub nanometer height profiles of structures on interfaces was used to develop a novel experimental technique to measure the line tension parameter, τ, of isolated nanoparticles at the three phase interface in a solid-liquid-vapor system. The τ parameter is a result of excess energy caused by the imbalance of the complex intermolecular forces experienced at the three phase contact line. Many differences in the sign and magnitude of the τ parameter exist in the current literature, resulting in τ being a controversial topic.