Insular fauna face disproportionate risks of extinction owing to direct human perturbation and intrinsic factors that are enhanced at small population sizes. Currently, our understanding of the processes that promote long-term persistence of naturally small populations and the cryptic processes that may contribute to accelerating their decline is limited by lack of empirical investigations across the range of natural conditions. Implementing effective protections for rare and understudied taxa requires the identification and examination of factors that limit recruitment at critical life stages. Predicting population health outcomes of future perturbations further necessitates an understanding a taxon’s behavioral ecology. Finally, cryptic threats to viability, such as inbreeding depression, must be investigated with an appreciation for taxon-specific life history, as these attributes can alter the context in which severe fitness reductions are expressed. In this project I enlist integrative and cross-disciplinary approaches to study the behavioral ecology and conservation genetics of a critically endangered West Indian Rock Iguana, Cyclura nubila caymanensis, on Little Cayman Island. I demonstrate how coastal communal nesting areas, a critical limiting resource on the island, serve a diverse population demographic and contribute to significantly enhanced nesting outcomes. These data emphasize the importance of expanding protections for major sites, as aggregative nesting appears to be perpetuated by both habitat suitability and adaptive fitness benefits. I next evaluate the possibility of evolved inbreeding avoidance strategies, including natal dispersal, non-assortative mate choice, and genetic bet-hedging. I conclude that the contribution of pre-reproductive dispersal to inbreeding avoidance likely outweighs that of active mate choice. Importantly, observed patterns of siring success imply constrained female choice and sexual conflict over genetic mating outcomes – a pattern that may extend to many territorial, male-driven mating systems and therefore should be an important consideration in genetic management. Finally, I investigate age-dependent inbreeding effects and the degree to which inbreeding depression may limit recruitment to the breeding population. I fail to reveal significant correlations of multi-locus heterozygosity with hatchling fitness; however, negative effects of parental inbreeding on fecundity and hatching success imply fitness consequences of inbreeding depression could be felt at other life stages.

The Kittlitz's murrelet (Brachyramphus brevirostris) is a rare member of the seabird family Alcidae that breeds in coastal areas of Alaska and Beringian Russia. The species belongs to the genus Brachyramphus, an unusual seabird taxon in which all three extant species nest non-colonially, situating their nests up to 75 km inland from coastal marine waters. This nesting strategy is different from that of most seabird species, which tend to nest colonially on remote islands or sea cliffs, where terrestrial predators are generally absent or cannot easily access nests. Within the genus Brachyramphus, Kittlitz's murrelet is notable because a majority of the global population appears to nest on the surface of the ground in rocky alpine habitat near inland or tidewater glaciers, foraging in adjacent marine waters influenced by glacial outflows. The unusual nesting habits of Kittlitz's murrelet have made the study of its nesting ecology difficult, and gaps therefore exist in our understanding of the species' breeding biology. Kittlitz's murrelet populations have declined substantially in core areas of its range, causing the U. S. Fish and Wildlife Service to designate the species as a candidate for protection under the Endangered Species Act. A better understanding of Kittlitz's murrelet nesting ecology is crucial for determining potential causes of these declines and for future management of the species. To this end, I studied Kittlitz's murrelet breeding ecology and nest site selection during 2008-2011 on Kodiak Island, Alaska, in an unglaciated area that was recently found to have large numbers of accessible nests. I and my colleagues found 53 active Kittlitz's murrelet nests in inland scree-dominated habitats and placed remote, motion-sensing cameras at 33 nests. Adults exchanged incubation duties at the nest every 24 or 48 h, almost exclusively during early morning twilight. Following hatching of eggs, parents provisioned their single nestling with an average of 3.9 to 4.8 fish per day, depending on the year. Parental visits to the nest during chick-rearing occurred primarily after sunrise in the early to mid-morning hours, and during evening twilight. Fish were delivered singly to the chick, and Pacific sand lance (Ammodytes hexapterus), a high-lipid forage fish, accounted for about 92% of all identifiable chick meal deliveries. Chick growth rates were high relative to confamilial species, consistent with the high quality of chick diets; the logistic growth rate constant (K) was 0.291, greater than that for any other semi-precocial alcid. Chicks fledged an average of 24.8 d after hatching and asymptotic chick body mass averaged about 135.5 g, approximately 58% of adult body mass. Age at fledging, asymptotic chick body mass (% adult mass), and the number of meal deliveries required to fledge a chick were all lower than or as low as any other species of semi-precocial alcid. The average estimated nest survival rate during 2008-2011 was 0.093 (95% CI = 0.01–0.30), which is extremely low compared to other species in the family Alcidae, and is almost certainly insufficient to sustain a stable population. The primary causes of nest failure were depredation (47% of total nest fates), mostly by red foxes (Vulpes vulpes), and unexplained nestling mortality on the nest (21% of nest fates). Saxitoxin and/or pathogenic endoparasite burdens were observed in five of six necropsied chick carcasses, suggesting possible causes for chick mortality not directly attributable to predation. Habitat characteristics of Kittlitz's murrelet nest sites differed significantly from unused sites at several scales. At a small scale (within 5 m of the nest), nest sites had a lower percent coverage of vegetation and higher percent coverage of intermediate-sized rocks (5–30 cm diameter), compared to randomly selected unused sites. Nest sites were also located on steeper, more north-facing slopes compared to randomly selected sites. Nest sites also had a lower percent coverage of vegetation than randomly-selected sites at larger scales (within 25 m and 50 m of the nest site). Nest sites were located significantly farther from the edge of densely-vegetated habitats than random sites. There was no evidence that nest sites were different from randomly-selected sites in terms of elevation, proximity to ridgelines, or proximity to the open ocean, although a low degree of variation within the study area for these habitat characteristics may have precluded detection of potential differences. Nest survival rates did not co-vary with slope, percent vegetation coverage, distance from vegetated edges, or percent cover of intermediate-sized rocks; however, this result may be an artifact of a limited sample size. The results of this thesis will provide managers with a better understanding of the factors that may limit Kittlitz's murrelet nesting success, such as nest predation and forage fish availability, as well as factors that may influence the quality and distribution of Kittlitz’s murrelet nesting habitat in the future, given on-going and progressive climate change. / Graduation date: 2013

Au cours de leur vie, les individus doivent constamment prendre des décisions qui peuvent fortement affecter leur valeur sélective. Pour optimiser leur prise de décisions, ces individus peuvent utiliser des informations soit issues de leurs propres interactions avec l’environnement (informations personnelles), soit issues de l’observation d’autres individus (informations sociales). La propension à utiliser des informations sociales et leur signification dépend certainement de paramètres individuels et environnementaux. Pour comprendre le potentiel évolutif de ce comportement à priori adaptatif, il est nécessaire de comprendre les causes de ces variations inter- et intra-individuelles. Le but de cette thèse était donc de déterminer les sources de variations individuelles dans l’utilisation d’information sociales hétérospécifiques pour le choix d’habitat de reproduction, chez le gobe-mouche à collier (Ficedula albicollis). A partir de données à long terme et d’expérimentations en nature dans la population de Gotland (Suède), j’ai montré que l’utilisation d’informations sociales n’est pas héritable dans cette population, mais dépend de l’âge et de l’agressivité des mâles, ainsi que de la taille de ponte des compétiteurs au moment où les gobe-mouches font leur choix. A partir d’une expérience de repasse, j’ai également montré que les femelles peuvent ajuster, en fonction de leur propre niveau d’agressivité, leur choix de site de nidification en fonction de caractéristiques de chants supposément liés à la qualité des mésanges charbonnières (Parus major). Cette thèse souligne l’importance de la personnalité dans l’utilisation d’informations sociales hétérospecifiques pour la sélection d’habitat de reproduction dans cette population, et montre que des caractéristiques fines de signaux à l’intention de congénères peuvent aussi être utilisées par d’autres espèces. Cela nous aide ainsi à mieux comprendre les mécanismes évolutifs de ce comportement / All their life, individuals have to make decisions that may strongly affect their fitness. To optimize their decisions, they can use personally acquired information but also information obtained from observing other individuals (“social information”). The propensity to gather and use social information and the information meaning might depend on both individual and environmental factors. Studying what drives within- and between-individual differences in social information use should help us understand the evolutionary potential of this supposedly adaptive behaviour. The aim of my PhD was to empirically investigate sources of variability in heterospecific social information use for breeding habitat selection. I worked on a natural population of collared flycatchers (Ficedula albicollis, Gotland Island, Sweden), a passerine species shown to cue on the presence, density, reproductive investment and nest site preference of dominant titmice for settlement decisions. Using both long term and experimental data, I showed that the use of heterospecific social information, measured as the probability to copy tit nest preference, is not heritable but depends on male age and aggressiveness and on tit apparent breeding investment at the time of flycatcher settlement. Using a playback experiment, I also showed that female flycatchers can fine-tune nest site choice according to (i) song features supposedly reflecting great tit (Parus major) quality and (ii) their own aggressiveness level. This thesis highlights the importance of personality in the use of heterospecific social information for breeding site selection in this population, and broadens the traditionally known sources of heterospecific information to fine song characteristics reflecting heterospecifics’ quality. To fully understand the evolutionary mechanisms and consequences of heterospecific social information use, genetically based plasticity and fitness consequences remains to be explored

Made available in DSpace on 2016-06-02T19:29:57Z (GMT). No. of bitstreams: 1 5249.pdf: 4090294 bytes, checksum: 3e43d0f22c6895a3bc1866edf5eafc88 (MD5) Previous issue date: 2012-06-29 / Financiadora de Estudos e Projetos / Nesting is a critical step on bird s life cycle, since nest predation is high all over the world. Predation influences the population dynamics, the community structure and the life history of birds. Birds evolved anti-predatory strategies, which include selection of safer places for nesting. Here we intent to: (i) analyze habitat characteristics selected by adults, and (ii) evaluate the influence of these elements on nests success, and fitness consequences to individuals. We studied the Lesser Elaenia (Elaenia chiriquensis), a migratory bird that breeds in Brazilian Savannas. We conducted the study between 2010 e 2011 in a 100 ha area in the Estação Ecológica de Itirapina, a protected area in São Paulo state, were the Lesser Elaenia is abundant along its breeding season (September to December). We analyzed habitat selection comparing characteristics of used and available patches. We made all tests using chi-square tests, analysis of variance, paired t-tests and permutation tests. We used program MARK to evaluate the influence of all of the parameters on nests success. We created a set of models that included temporal and a set of environmental parameters and used Akaike s Information Criterion to evaluate the adjustment of each model to our data. Adults apparently selected anemochoric plants, with larger crowns and more lichen flakes on stalks, but did not show preference for specific plant species. Individuals also preferred patches with high plant density and high density of Aspidosperma tomentosum, the most used plant as nest substrate. Contrary of our expectations, none of these characteristics influenced nests success. However, some parameters not evaluated for selection, influenced the offspring survival. Vegetation density on nest sites was the most important variable, probably because it helps concealing nests and parental activities. Nest age and time along the breeding season were also important elements and both reduced nests success. Nest predation, habitat selection, and their consequences to the fitness are complex and are related to many variables. The present study contributed with the knowledge on this subject in tropical areas. / A nidificação é uma etapa crítica no ciclo de vida das aves, uma vez que a predação de ninhos é alta em todo o globo. Ela exerce influência na dinâmica das populações, estrutura das comunidades e evolução da história de vida do grupo. Diante disso, evoluíram estratégias antipredação, entre elas, a seleção de hábitats seguros para a nidificação pelos adultos. Assim, nesse trabalho tivemos como objetivos principais (i) conhecer os elementos do hábitat de nidificação selecionados pelos adultos e (ii) avaliar a influência desses elementos no sucesso dos ninhos, de forma a conhecer o valor adaptativo das escolhas dos adultos. Trabalhamos com Elaenia chiriquensis, um Passeriforme migratório que nidifica em áreas de Cerrado no Brasil. Conduzimos o estudo entre 2010 e 2011, em uma área de 100 ha na Estação Ecológica de Itirapina, unidade de conservação localizada no interior paulista, em que E. chiriquensis é abundante na estação reprodutiva (setembro a dezembro). Fizemos as análises de seleção do hábitat de nidificação comparando características das manchas de nidificação às manchas nas imediações, disponíveis aos casais. Usamos testes de Qui- Quadrado, análises de variância (ANOVAs), testes de permutação e testes-t pareados para as variáveis amostradas. Para avaliarmos a influência dessas e de outras características, relacionadas aos ninhos, na sobrevivência da prole, usamos o programa MARK. Criamos modelos que incluíam variáveis temporais e nossas variáveis de interesse e avaliamos, usando o critério de informação de Akaike, o ajuste dos modelos ao nosso conjunto de dados. Os adultos aparentemente selecionaram vegetais anemocóricos, com copa de tamanho maior e maior abundância de liquens nos caules como substrato dos ninhos, mas não exibiram preferência pelas espécies usadas como substrato. Elaenia chiriquensis também mostrou preferência por locais com alta densidade de vegetação lenhosa e alta abundância de Aspidosperma tomentosum, a espécie vegetal mais usada como substrato dos ninhos. Contrariando nossas expectativas, nenhuma dessas características teve influência no sucesso dos ninhos. No entanto, características relacionadas aos ninhos, e que não foram avaliadas quanto à seleção, tiveram influência na sobrevivência da prole. A mais importante delas foi a densidade de vegetação nos sítios de nidificação, que provavelmente reduz as chances de encontros com predadores e oculta a atividade dos adultos. A idade dos ninhos e a influência do tempo ao longo das estações também foram variáveis de peso na explicação dos dados e ambos reduziram as chances de sucesso dos ninhos. A predação de ninhos, a seleção do hábitat de nidificação e as consequências para o fitness dos indivíduos são assuntos de grande complexidade biológica e envolvem diversas variáveis. O presente estudo contribui com o conhecimento acerca do assunto em áreas tropicais.

Abstract Anthropogenic climate change and habitat loss and deterioration affect populations worldwide. Climate warming has changed phenologies of many species across trophic levels. Some predator populations now experience temporal mismatches with their prey, as timings of peak prey abundance and of the predator’s highest food demands no longer meet. The temporal mismatch hypothesis suggests that the population’s recruitment rate is related to its degree of synchrony with the food resources needed to feed offspring. However, species’ and populations’ responses to climate warming differ. Human land use alters and destroys habitats of countless species. For example, many boreal forest bird populations have declined, presumably due to intensive forestry. It has decreased the amount of dead wood, causing a threat to saproxylic species. Identification of the key characteristics of high-quality habitats is essential for conservation planning and for developing sustainable forestry. As individuals are suspected to settle in habitats that maximize their fitness, analysis of nest site selection can be used to identify the key habitats. My dissertation concerns the impacts of climate change and habitat deterioration on boreal populations. I use hole-nesting passerines as model species. By utilizing long-term data I show that breeding phenologies of Parus major and Poecile montanus, but not of Cyanistes caeruleus, have shifted earlier. Also, the timing of the food peak has advanced, improving the synchrony between P. montanus and caterpillars. In P. major and C. caeruleus, synchrony has remained good. However, the positive effect of good synchrony on breeding success seems to be conditional, arising only in certain circumstances, such as in years of high caterpillar abundance. I suggest that in boreal populations temperature affects timing of breeding mostly as a proximate factor. The availability of standing decaying trees used for nesting sites was the most important habitat characteristic determining the nest site selection of P. montanus. Remote sensing data alone was insufficient to produce reliable models, as the ecologically important small-scale factor can only be determined by direct field surveys. Omission of forest thinning in selected forest sites would ensure the continuous availability of decaying wood with positive influence on biodiversity in managed forests. / Tiivistelmä Ihmisen aiheuttama habitaattien katoaminen ja huononeminen sekä ilmastonmuutos vaikuttavat populaatioihin kaikkialla maailmassa. Ilmaston lämpeneminen on muuttanut monien lajien fenologioita eri trofiatasoilla. Osalla saalistajalajien populaatioista suurin ravinnontarve ei enää ajoitu samaan aikaan saaliin runsaushuipun kanssa. Ajoituksen eriaikaisuus -hypoteesin mukaan todennäköisyys populaatioon rekrytoitumiselle riippuu synkronian asteesta saaliin kanssa. Ilmaston lämpenemisen vaikutuksissa lajeihin ja populaatioihin on kuitenkin vaihtelua. Ihmisen maankäyttö muuttaa ja tuhoaa lukuisien lajien elinympäristöjä. Esimerkiksi useiden boreaalisten metsien lintupopulaatioiden pienentymistä on selitetty intensiivisellä metsätaloudella. Lahopuun määrä metsissä on vähentynyt, mikä on uhka lahopuusta riippuvaisille lajeille. Korkealaatuisten habitaattien keskeisten piirteiden tunnistaminen on tärkeää luonnonsuojelun ja kestävän metsätalouden suunnittelulle. Koska yksilöiden oletetaan valitsevan niiden kelpoisuutta maksimoivia elinympäristöjä, pesäpaikanvalinta-analyysiä voidaan käyttää tärkeiden habitaattipiirteiden tunnistamiseen. Tarkastelen väitöskirjassani ilmastonmuutoksen ja habitaattien laadun vaikutuksia boreaalisiin populaatioihin. Mallilajeina käytän koloissa pesiviä varpuslintuja. Hyödyntämällä pitkäaikaisaineistoja osoitan, että lisääntymisen ajoittuminen on aikaistunut tali- ja hömötiaisella, mutta ei sinitiaisella. Myös ravintohuippu on aikaistunut, mikä on parantanut synkroniaa hömötiaisen ja sen pääasiallisen ravinnon eli toukkien välillä. Tali- ja sinitiaisella synkronia on pysynyt hyvänä. Hyvän synkronian myönteinen vaikutus lisääntymismenestykseen vaikuttaa kuitenkin ehdolliselta: se tulee esiin vain tietyissä olosuhteissa, kuten vuosina jolloin toukkia on runsaasti. Kevään lämpötilat näyttävät vaikuttavan pesinnän ajoittumiseen erityisesti proksimaattisena tekijänä. Pesäpaikkoina toimivien seisovien lahopuiden määrä on tärkein hömötiaisen pesäpaikanvalintaa määräävä tekijä. Kaukokartoitusaineisto yksinään ei riitä luotettavien mallien tuottamiseen, sillä ekologisesti tärkeät pienen skaalan tekijät voidaan kartoittaa vain suorin maastomittauksin. Metsien harventamatta jättäminen valituilla laikuilla turvaisi lahopuun jatkuvan saatavuuden, mikä vaikuttaisi myönteisesti talousmetsien biodiversiteettiin.

Abstract Animals need information about local conditions to make optimal fitness-enhancing decisions such as where to breed. Information can be acquired by personal sampling of the environment, but it can also be acquired from other individuals. The latter is termed social information use. Social information use has gained a lot of attention in modern ecology because it affects principal ecological phenomena such as animal distribution and resource use. Social information use is not restricted to obviously cognitive mammals and birds but is also found in e.g. reptiles, fish and insects. Social information use studies have thus far been concentrated on situations with one social information user and one (often the same) source species. The community-wide consequences of social information use have almost exclusively been considered in theoretical studies. In this thesis, I studied empirically social information use in the nest site selection within and between species in a cavity-nesting bird community consisting of the collared flycatcher (Ficedula albicollis), the great tit (Parus major) and the blue tit (P. caeruleus). I studied social information use on two time scales: social information gathered just before a breeding attempt, and social information gathered already during the previous breeding season for the following year’s breeding attempt. I used experiments in which different white geometric symbols represented nest site choices of earlier settled tutors and empty nest boxes, and I observed the symbol choices of later-breeding individuals. The symbol approach eradicates bias from innate and learned preferences enabling strong inference. My results demonstrate that collared flycatchers use social information from both con- and heterospecific tutors in different situations in a flexible manner. Hence, social information use seems to be context-dependent. Furthermore, I show that great tits avoid choosing nest site characteristics which were associated with either con- or heterospecifics nests the previous year and prefer symbols which depicted an empty nest box the previous year, probably to avoid nest ectoparasites. I also show that in great tits the male has greater influence on nest site selection than previously assumed even though the female builds the nest. My thesis deepens our understanding about the complexity of social information use and highlights its significance in future ecological research. / Tiivistelmä Eläimet tarvitsevat informaatiota paikallisista olosuhteista tehdäkseen edullisia päätöksiä esimerkiksi siitä, missä lisääntyä. Informaatiota voidaan hankkia tutkimalla ympäristöä itse, mutta sitä voidaan hankkia myös muilta yksilöiltä. Jälkimmäistä kutsutaan sosiaaliseksi informaatioksi. Eläinten sosiaalisen informaation käyttö on saavuttanut viime aikoina paljon huomiota ekologisessa tutkimuksessa, koska se vaikuttaa tärkeisiin ekologisiin ilmiöihin, kuten eläinten levinneisyyteen ja resurssien käyttöön. Sosiaalinen informaation käyttö ei rajoitu vain nisäkkäisiin ja lintuihin, vaan sitä on havaittu myös esimerkiksi matelijoilla, kaloilla ja hyönteisillä. Sosiaalisen informaation käyttöä on tutkittu lähes yksinomaan lajien sisällä tai käyttäen ainoastaan yhtä sosiaalisen informaation lähdelajia. Yhteisötason vaikutuksia on pohdittu miltei pelkästään teoreettisissa tutkimuksissa. Tässä väitöskirjatyössä tutkin kokeellisesti sosiaalisen informaation käyttöä pesäpaikan valinnassa lajin sisällä ja lajien välillä kolopesivien lintujen yhteisössä sepelsiepolla (Ficedula albicollis), talitiaisella (Parus major) ja sinitiaisella (P. caeruleus). Otin tutkimuksissani huomioon kaksi aikatasoa: tutkin juuri ennen pesimisyritystä kerätyn sekä jo edellisen lisääntymiskauden aikana seuraavan vuoden pesintää varten hankitun sosiaalisen informaation käyttöä. Kokeissani käytin linnunpönttöihin kiinnitettyjä erilaisia valkoisia geometrisia symboleita, jotka edustivat aiemmin pesinnän aloittaneiden lintujen eli tuutoreiden pesäpaikanvalintoja. Seurasin tämän jälkeen myöhemmin pesimään saapuvien parien symbolivalintoja. Tulosteni perusteella sepelsiepot hankkivat sosiaalista informaatiota sekä lajitovereiltaan että tiaisilta joustavasti eri tilanteissa. Lisäksi osoitan, että talitiaiset välttävät valitsemasta pesäpaikkoja, jotka olivat asuttuina edellisenä vuonna, ja suosivat sellaisia pesäpaikkoja, joissa ei pesitty edellisenä vuonna - todennäköisesti välttääkseen kirppuja ja muita pesäloisia. Osoitan myös, että talitiaiskoirailla on suurempi vaikutus pesäpaikan valintaan kuin aikaisemmin on oletettu, vaikka naaraat rakentavat pesän. Väitöskirjatyöni syventää käsitystämme sosiaalisen informaation käytön monitahoisuudesta eläinkunnassa ja korostaa sen merkitystä ekologisessa tutkimuksessa.

No description available.

In the late 1980s the endangered Chatham Island oystercatcher (Haematopus chathamensis) (CIO) was estimated at less than 110 individuals. Endemic to the Chatham Islands, New Zealand, it was feared to be declining and, based on existing productivity estimates, in danger of extinction within 50-70 years. These declines were thought to be caused by numerous changes since the arrival of humans, including the introduction of several terrestrial predators, the establishment of marram grass (Ammophila arenaria) which changes dune profiles, and increased disturbance along the coastline. The New Zealand Department of Conservation has undertaken recovery planning and conservation management to increase CIO numbers since the late 1980s. Recovery planning raised some key research questions concerning the population dynamics, habitat selection, and breeding biology of Chatham Island oystercatcher (CIO), and the critical factors currently limiting the population. The objectives of this study were to collect and interpret data on: 1) population size, trends, and distribution across the Chathams, 2) basic breeding parameters, 3) recruitment and mortality rates, 4) habitat selection at the general, territorial and nest-site levels, 5) habitat factors that are correlated with territory quality, and 6) cues that elicit territorial behaviour in CIO.

No description available.