The research contained in these papers embodies both results from direct archaeological investigation and also the development of techniques (geophysical, chronological and geoarchaeological) in order to understand long-term settlements and their associated landscapes in Orkney and Shetland. Central to this research has been the study of soil management strategies of arable plots surrounding settlements from the Neolithic to the Iron Age. It is argued that this arable system provides higher yields in marginal locations. The ability to enhance yield in good years and to store surplus can mitigate against shortage. Control and storage of this surplus is seen as one catalyst for the economic power of elite groups over their underlying or 'client' population. The emergence of a social elite in the Iron Age, building brochs and other substantial roundhouses of near broch proportions, is seen as being linked to the control of resources. Evidence at the site of Old Scatness indicated that there was a continuity of wealth and power from the Middle Iron Age through the Pictish period, before the appearance of the Vikings produced a break in the archaeological record. The Viking period saw a break in building traditions, the introduction of new artefacts and changes in farming and fishing strategies. Each of the papers represents a contribution that builds on these themes.

The two archipelagos of Orkney and Shetland, which form the Northern Isles of Britain, are an active focus of archaeological research. The rich Neolithic heritage of Orkney has been acknowledged by the granting of World Heritage status. Although set in both a biogeographically peripheral position and within what may be considered to be marginal landscapes, these North Atlantic islands have a large number of settlement sites with long occupational sequences, often stretching from the Neolithic to the Late Iron Age or into the Norse period. The mixed paleoeconomic strategy presented by three of these settlements¿Tofts Ness, Sanday, Orkney (excavated 1985¿1988); the Iron Age sequences at Old Scatness, Shetland (excavated 1995¿2006); and Late Neolithic and Bronze Age cultivated middens from Jarlshof, Shetland (investigated in 2004)¿provide the core of the evidence discussed within this paper (the radiocarbon chronologies for the key sequences from these three sites are provided as Appendix 1). The role of the prehistoric paleoeconomy is argued to be of central importance in the longevity of these settlements. In particular, barley production is evidenced on all three sites by the plant macrofossils and by the human investment in the creation and management of manured soils, providing an infi eld area around the settlement. This paper focuses on the identifi cation of these anthropogenic soils in the archaeological record. The investment in and management of these arable soils provides clear evidence for resource creation on all three sites. It is argued that these soils were a crucial resource that was necessary to support intensive barley cultivation. The intensive management implied by the presence of these soils is seen as a catalyst for sedentary living and sustainability within a marginal landscape. The evidence also demonstrates the continuity of agricultural practice from the Neolithic to the Iron Age together with the social dynamics that such a practice generates. This paper is in two parts: the fi rst section examines in detail the evidence for the presence of anthropogenic soils and the mixed economic strategies for the Neolithic and Early Bronze Age presented by the evidence from Tofts Ness and Jarlshof. The evidence for the continuity of this intensive strategy of soil management is seen from the later evidence of the Bronze Age and Early Iron Age at Tofts Ness and the Middle Iron Age evidence at Old Scatness. The second part of the paper examines the importance of these soils as an inherited resource within the Neolithic and Early Bronze Age paleoeconomic system. Two models are presented. The fi rst examines the cyclic importance of human creation and maintenance of small arable plots to high barley production yields and therefore to site viability, and the effect this has within a mixed resource system in providing settlement viability through time. The second explores the theoretical land and seascape that would provide this mixed resource base.

This thesis looks at risk factors for multiple sclerosis (MS), a chronic, degenerative autoimmune disease which is usually diagnosed between the ages of 20 and 50 years. It is estimated to affect over 100,000 people in the UK. The research setting was Orkney and Shetland, two archipelagos situated north of mainland Scotland, and both of which have very high MS prevalence as do other countries at high latitudes. I examine genetic and environmental risk factors in Orkney and Shetland using multiple methods over four studies. I also review the vitamin D and UV exposure literatures as these are risk factors pertinent to MS in Orkney and Shetland. After devoting three chapters to introducing the purpose of the thesis, MS, and Orkney and Shetland, in the fourth chapter, I aim to establish whether the birthplace of cases show any spatial, temporal, or spatiotemporal clustering. Evidence of these kinds of clustering may indicate that there are environmental risk factors present in some areas or that were present over particular periods, which raise risk of developing MS. Although I find statistically significant temporal, spatial, and spatiotemporal clustering in Orkney, and a spatial cluster in Shetland, for multiple reasons these results need to be interpreted with caution. I conclude that the clusters are very likely to be artefacts. Furthermore, there are multiple possible alternative explanations for such clusters that could not be explored by the available data. Chapter 5 examines the heritability of MS in Orkney and Shetland to estimate the proportion of phenotypic variance attributable to additive genetic effects. I also look at the birthplaces of ancestors of cases and controls to see if any locations contribute a greater amount of ancestral DNA to the gene pool of modern MS cases, which I term ‘genetic clustering’. In Orkney I obtained a heritability estimate of 0.36 (95% CI -0.26, 0.98); in Shetland this estimate was 0.20 (95% CI -1.88, 2.28). These modest estimates are consistent with the heritability literature. The genetic clustering analyses highlight two Orkney registration districts, Kirkwall and Westray, which earlier studies identified as areas of MS clustering. I also identify three Shetland registration districts, however these locations had not shown any evidence of clustering in earlier studies. Again, I advise caution in interpreting results, particularly as all the error bars across registration districts overlap. Chapter 6 presents a scoping review to map the literature and identify evidence of an association between vitamin D and UV exposure with MS. In methodically searching the literature, I identify a large and heterogeneous evidence base comprising multiple observational, intervention, and genetic studies. Overall, many studies support an association between vitamin D deficiency and MS. There is also evidence for an association between UV exposure and MS, although UV exposure is considerably less explored than vitamin D. I finally identify gaps in the literature and make suggestions for future research. In Chapter 7 I aim to compare vitamin D levels in Orkney and mainland Scotland, and establish the determinants of vitamin D status in Orkney. I firstly compare mean vitamin D and prevalence of deficiency in cross-sectional data from studies in Orkney and mainland Scotland. I secondly use multivariable regression to identify factors associated with vitamin D levels in Orkney. I find that mean (standard deviation) vitamin D is significantly higher in Orkney compared to mainland Scotland (35.3 (18.0) and 31.7 (21.2), respectively), and prevalence of severe deficiency is lower in Orkney (6.6% to 16.2% p = 1.1 x 10-15). Factors associated with higher vitamin D in Orkney include older age, farming occupations and foreign holidays. I conclude that although mean vitamin D levels are higher in Orkney compared to mainland Scotland, there is substantial variation within the Orkney population which may influence MS risk. Chapter 8 examines the correlates and determinants of UVB exposure in Shetland. I firstly construct correlation matrices to visualise how 1) personal characteristics such as sex, occupation, and skin type, 2) physical activity, and 3) body weight and fat, correlate with UVB exposure. I then use multivariable regression to identify factors associated with UVB exposure in Shetland. I run two multivariable models. The first includes the full sample size where activity data were measured by questionnaires. The second includes both questionnaire physical activity data and step-count data from pedometers, however as only a subset of participants had been supplied with pedometers, this analysis comprises a smaller sample size. I find that the amount of skin exposed was most strongly correlated with UVB exposure. Step count and activity minutes were also moderately positively correlated, and indoor occupations moderately negatively correlated, with UVB exposure. The regression analysis using the full sample with questionnaire activity data found that factors associated with greater UVB exposure were age and ambient UVB, while working indoors was significantly associated with lower UVB exposure. The model including the pedometer data found that found that age, total steps, and the amount of ambient UVB were significantly associated with greater UVB exposure. I conclude that atmospheric conditions, working outdoors and older age are important factors in UVB exposure in Shetland. It remains to be seen how UVB exposure translates to vitamin D levels in Shetland. I found evidence for environmental and genetic risk factors for MS in Orkney and Shetland. The two environmental risk factors, vitamin D deficiency and reduced UV exposure, are more likely to affect the younger population who are still within their lifetime risk of developing MS.

The study of human palaeopathology has developed considerably in the last three decades resulting in a structured and standardised framework of practice, based upon skeletal lesion patterning and differential diagnosis. By comparison, disarticulated zooarchaeological assemblages have precluded the observation of lesion distributions, resulting in a dearth of information regarding differential diagnosis and a lack of standard palaeopathological recording methods. Therefore, zoopalaeopathology has been restricted to the analysis of localised pathologies and ‘interesting specimens’. Under present circumstances, researchers can draw little confidence that the routine recording of palaeopathological lesions, their description or differential diagnosis will ever form a standard part of zooarchaeological analysis. This has impeded the understanding of animal disease in past society and, in particular, has restricted the study of systemic disease. This research tackles this by combining the disciplines of human palaeopathology and zoopalaeopathology and focusing on zoonotic disease. The primary aim of this research was to investigate the skeletal manifestation of bTB in cattle, sheep/goat and pig to establish differential diagnostic criteria for its identification in zooarchaeological assemblages. Methods commonplace in human palaeopathology were adapted and applied to zoopalaeopathology, in addition to radiography and aDNA analysis. The results emphasise the difficulties but also the potential associated with the identification of systemic diseases in zooarchaeological assemblages. An approach to the classification of potentially infectious lesions is presented that enables the calculation of crude prevalence in disarticulated assemblages. In addition, the potential for a DNA analysis to shed further light on animal disease in the past is emphasised. / Arts and Humanities Research Council (AHRC) / Many of the images have been removed from the online version due to copyright restrictions. The embargo period for the thesis ended: 16th January 2018.

Thesis (MPA)--Stellenbosch University, 2000. / ENGLISH ABSTRACT: South African local government is undergoing a critical process of transformation and restructuring. New structures, institutions and systems which are being established change local government to accomplish the developmental objectives of the society, improve service delivery and ensure optimum governance. The study is aimed at investigating and examining the type of municipal structure that has the capacity to achieve the objectives of local government. In this regard, the status quo of municipalities in the KOSH (Klerksdorp, Orkney, Stilfontein and Hartebeesfontein) area, a metropolitan municipality without sub-councils and an amalgamated Category B Municipality operating in the area of jurisdiction of Category C Municipality is explored and critically examined. The hypothetical statement namely that the KOSH area requires a restructured, rekindled and revitalised municipal structure and the amalgamation of unviable municipalities into a larger jurisdiction to sustain development, are tested. A review of new structures and systems of local government in South Africa is made. In this regard the legal framework and context of the municipal demarcation process, structures and systems is of paramount importance. A critical analysis of all municipalities in the KOSH area including the Southern District Council in relation to their political and administrative components is made. The background and profile of each town and city in the KOSH area is also given. This encapsulates the historical background of the area, its economy and socio-demographic profile. In the final analysis the study highlights the positive and negative effects of amalgamated municipalities whether Category A or B Municipalities. The study concludes that the KOSH area lends itself to the establishment of an amalgamated Category B Municipality operating within the jurisdiction of a Category C Municipality. The study also concludes that it is possible and viable to de-establish the present separate local authorities and create a viable amalgamated Category B Municipal structure that will improve service delivery and provide optimum governance for the KOSH area. Specific recommendations in respect of the development of the KOSH area are made. / AFRIKAANSE OPSOMMING: Suid Afrikaanse plaaslike regering ondergaan 'n kritieke proses van transformasie en herstrukturering. Nuwe strukture, instellings en sisteme wat geskep word verander plaaslike regering ten einde die ontwikkelingsoogmerke van die gemeenskap te bereik, dienslewering te verbeter en om optimum regering daar te stel. Die studie is gemik op die ondersoek en ontleding van die soort munisipale strukture wat in staat is om die bogemelde oogmerke te bereik. In hierdie verband, word die status quo van munisipaliteite in die KOSH (Klersksdorp, Orkney, Stilfontein and Hartebeesfontein) gebied, 'n metropolitaanse munisipaliteit sonder sub-rade, en 'n geamalgemeerde kategorie B munisipaliteit wat in die jurisdiksionele gebied van 'n kategorie C munisipaliteite funksioneel ondersoek en krities ontleed. Die hipotese naamlik dat die KOSH gebied 'n gestruktureerde, munisipale struktuur benodig sowel as die amalgamering van nie-lewensvatbare munisipaliteite in 'n groter jurisdiksie om ontwikkeling te handhaaf, word ondersoek. 'n Oorsig word gegee van die nuwe strukture en sisteme van plaaslike regering in Suid Afrika. In hierdie vervand is die regsraamwerk en die konteks van die munisipale afbakeningsproses, strukture en sisteme van kardinale belang. 'n Kritiese ontleding van al die munisipaliteite in die KOSH gebied, insluitende die Suidelike Distriksraad, uitsluitende hul politieke en administratiewe samestelling, is gemaak. Die agtergrond en die profiel van elke dorp en stad in die KOSH gebied work ook weergegee. Dit sluit in die geskiedkundige agtergrond van die gebied, asook die gebied se ekonomie en sosiodemografiese profiel. In die finale ontleding beklemtoon die studie die voor-en nadele van geamalgameerde munisipaliteite, ongeag of hulle kategorie A of B munisipaliteite is. Die studie toon aan dat die KOSH gebied homself leen tot die skepping van 'n ge-amalgameerde kategorie B munisipaliteit wat binne die jurisdiksie van 'n kategorie C munisipaliteit opereer. Die studie het ook aangetoon dat dit moontlik en haalbaar is om die bestaande aparte plaaslike owerhede te hervestig en 'n haalbaar kategorie B munisipale struktuur daar te stel wat dienslewering sal bevorder en optimum regering vir die KOSH gebied daar sal stel. Spesifieke aanbevelings word gemaak met betrekking tot die ontwikkeling van die KOSH gebied.

A methodology for ageing foetal and neonatal cattle is developed, involving radiographic examination of infant mandibles for early developmental stages in molariform teeth; tooth-wear methodologies are imprecise at this stage before wear commences. Known-age modern bovine foetal and neonate material are collected as a control assemblage for method development (n=73); six Neolithic to Norse era assemblages from Orkney are examined using the modified technique together with standard tooth-wear analysis and other methodologies. Foetal and died-at-birth material is diagnosed at most sites using the new technique, together with a range of other peri-natal age-groups. Ageing at this early stage is highly relevant in the diagnosis of milking as a palaeoeconomy: the accepted view is that unwanted (male) calves were slaughtered to maximise milk for human consumption, hence a surfeit of neonate calf remains, as at the study sites. The diagnosis of foetal and died-at-birth material challenges this view, suggesting that attritional causes may have contributed to deaths at this stage. Although milking was probably carried out at most of the study sites, this may have been combined with slaughter of cattle for meat in a pragmatic exploitation strategy. Literary research shows possible attritional causes of abortion and early death in calves, in particular dietary insufficiency in pregnant cows, microbial infections, and also inadequate colostrum uptake. Additionally, research is used to consider the challenges to health that early milking might have posed, to the calf as mentioned, but also to the cow, where three main health issues are highlighted: infertility, mastitis and lameness.

The evolutionary history of the human species has generated complex patterns of population structure and linkage disequilibrium (non-random associations of alleles at different loci or LD). The understanding of these patterns is crucial to two of the most important challenges facing biomedical science today: the identification of disease predisposing genes and prediction of variable drug reactions. The genetic variation revealed by these endeavours can also illuminate the underlying population historical processes. Here, I illustrate each of these applications: first, by assessing the demographic context of cultural change in the British Isles. Y chromosome variation indicates that the Viking age invasions left a significant paternal legacy (at least in Orkney), while the Neolithic and Iron Age cultural transitions did not. In contrast, mitochondrial DNA and X chromosome variation indicate that one or more of these pre-Anglo-Saxon revolutions had a major effect on the maternal genetic heritage of the British Isles. Second, I provide conclusive evidence that diverse demographic histories produce strikingly different patterns of association. Elevated LD extends an order of magnitude further in the Lemba, a Bantu-Semitic hybrid population, than in the putative parental populations. A significant relationship between allele-frequency differentials in the parental populations and the Lemba LD demonstrates that it is admixture-generated. Third, I demonstrate that the genetic structure inferred in a heterogeneous sample using neutral markers (a) shows ethnic labels to be inaccurate descriptions of human population structure, and (b) predicts drug metabolising profiles, defined by the distribution of drug metabolising enzyme variants. Thus the trade-off between therapeutic response and adverse drug reactions will differ between different sub-clusters. Assessment of genetic structure during drug trials is therefore, like the empirical evaluation of each population’s pattern of LD, a necessity.

This thesis considers the nature of pottery and its wider roles in the Highlands and Northern Isles of Scotland from 2500-1800 BC. The period under study represents a key moment in British prehistory with the introduction of metallurgy and wide-ranging changes in society. Since the inception of early Bronze Age studies pottery has played an important role in examinations of identity and chronology. As identified by several scholars there has been a recurrent emphasis on a select number of interpretive themes and regions such as Wessex and Aberdeenshire. This has marginalised certain areas creating an imbalance in our understanding of the tempo and dynamics of change during the period. Recent reviews have begun to address this issue, highlighting the importance of regional studies to our overall understanding of change in the later 3rd millennium. At present, there is no synthesis of ceramic material from the Highlands and Northern Isles that considers the diverse array of pot types and the contexts in which they are found. In response, this thesis aims to characterise the range of ceramic types, their contexts and associations. Through the course of this thesis a series of detailed regional datasets and interpretations are constructed. This is coupled with a review of the longer-term ceramic sequence across the study area, situating the advent of novel pot types within the existing ceramic repertoire. Secondly, this thesis examines the dynamics of ceramic similarity and difference, and what this reveals about regional preferences and identities alongside broader intra and supra regional networks. Drawing on recent relational approaches this thesis explores how ceramic categories came into being, persisted and dissipated at a range of scales. These approaches highlight the fluid nature of change and the need to consider pots as elements of wider assemblages. Through this examination it is possible to detect distinct trends in regional ceramics, allowing for the construction of narratives that extend beyond defining visual similarities, contributing towards understanding the wider significance of similarity and difference.

No description available.

A methodology for ageing foetal and neonatal cattle is developed, involving radiographic examination of infant mandibles for early developmental stages in molariform teeth; tooth-wear methodologies are imprecise at this stage before wear commences. Known-age modern bovine foetal and neonate material are collected as a control assemblage for method development (n=73); six Neolithic to Norse era assemblages from Orkney are examined using the modified technique together with standard tooth-wear analysis and other methodologies. Foetal and died-at-birth material is diagnosed at most sites using the new technique, together with a range of other peri-natal age-groups. Ageing at this early stage is highly relevant in the diagnosis of milking as a palaeoeconomy: the accepted view is that unwanted (male) calves were slaughtered to maximise milk for human consumption, hence a surfeit of neonate calf remains, as at the study sites. The diagnosis of foetal and died-at-birth material challenges this view, suggesting that attritional causes may have contributed to deaths at this stage. Although milking was probably carried out at most of the study sites, this may have been combined with slaughter of cattle for meat in a pragmatic exploitation strategy. Literary research shows possible attritional causes of abortion and early death in calves, in particular dietary insufficiency in pregnant cows, microbial infections, and also inadequate colostrum uptake. Additionally, research is used to consider the challenges to health that early milking might have posed, to the calf as mentioned, but also to the cow, where three main health issues are highlighted: infertility, mastitis and lameness. / The attached files include the Landscape pages and appendices V and VI. Not included are the jpeg Mandible files. A cover sheet was not available.