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Ecology of bacterioplankton specific to the oxygenated hypolimnia of deep freshwater lakes / 大水深淡水湖の有酸素深水層に特有な細菌の生態解明Okazaki, Yusuke 26 March 2018 (has links)
京都大学 / 0048 / 新制・課程博士 / 博士(理学) / 甲第20953号 / 理博第4405号 / 新制||理||1633(附属図書館) / 京都大学大学院理学研究科生物科学専攻 / (主査)教授 中野 伸一, 教授 木庭 啓介, 教授 中川 尚史 / 学位規則第4条第1項該当 / Doctor of Science / Kyoto University / DFAM
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Insights into the ribosomal, extra-ribosomal and developmental role of RP L13a in mammalian modelKour, Ravinder 10 December 2019 (has links)
No description available.
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Effects of Different Formulations of Glyphosate on Rumen Microbial Metabolism and Bacterial Community Composition in the Rumen Simulation Technique SystemBrede, Melanie, Haange, Sven-Bastiaan, Riede, Susanne, Engelmann, Beatrice, Jehmlich, Nico, Rolle-Kampzczyk, Ulrike, Rohn, Karl, von Soosten, Dirk, von Bergen, Martin, Breves, Gerhard 06 June 2023 (has links)
The use of the herbicide glyphosate and its formulations on protein-rich feedstuff for cattle
leads to a considerable intake of glyphosate into the rumen of the animals, where
glyphosate may potentially impair the 5-enolpyruvylshikimate-3-phosphate pathway of
the commensal microbiota, which could cause dysbiosis or proliferation of pathogenic
microorganisms. Here, we evaluated the effects of pure glyphosate and the formulations
Durano TF and Roundup® LB plus in different concentrations on the fermentation pattern,
community composition and metabolic activity of the rumen microbiota using the Rumen
Simulation Technique (RUSITEC). Application of the compounds in three concentrations
(0.1mg/l, 1.0mg/l or 10mg/l, n=4 each) for 9days did not affect fermentation parameters
such as pH, redox potential, NH3-N concentration and production of short-chain fatty
acids compared to a control group. Microbial protein synthesis and the degradation of
different feed fractions did not vary among the treatments. None of the used compounds
or concentrations did affect the microbial diversity or abundance of microbial taxa.
Metaproteomics revealed that the present metabolic pathways including the shikimate
pathway were not affected by addition of glyphosate, Durano TF or Roundup® LB plus.
In conclusion, neither pure glyphosate, nor its formulations Durano TF and Roundup® LB
plus did affect the bacterial communities of the rumen.
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The Impact of Cyanotoxin Exposure on the Mice Gut Microbiome Communities StructurePakuwal, Evance 31 July 2023 (has links)
No description available.
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Towards a Better Understanding of Poultry Intestinal Microbiome through Metagenomic and Microarray StudiesWei, Shan 20 May 2013 (has links)
No description available.
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DETEKTION AV MAKROLIDRESISTENS HOS MYCOPLASMA GENITALIUM MED PANTHER FUSIONHansson, Lucia January 2023 (has links)
Hansson, L. Detektion av makrolidresistens hos Mycoplasma genitalium med Panther Fusion. Examensarbete i biomedicinsk laboratorievetenskal 15 högskolepoäng. Malmö universitet: Fakulteten för hälsa och samhälle, institutionen för Biomedicinsk Vetenskap, 2023. Mycoplasma genitalium är en sexuellt överförbar mikroorganism som infekterar både män och kvinnor, som behandlas oftast med azitromycin med ett ökande problem av antibiotikaresistens. För M. genitalium är makrolidresistens det främsta hotet mot behandling, och har kopplats till fyra punktmutationer i region V i 23S rRNA-genen: A2071G, A2072G, A2072C samt A2071T (M. genitalium G-37, GenBank NR_077054.1). Projektet har undersökt möjligheten att ersätta nuvarande in house realtids-PCR metod för makrolidresistensbestämning med ett integrerat nukleinsyra-reningssteg och realtids-PCR med Panther Fusion (Hologic) hos Klinisk mikrobiologi i Lund. Under projektet analyserades 55 patientprover som samlades under perioden januari-februari 2023 i Region Skåne, som blivit positiva vid M. genitalium testning. Dessa prover har därefter analyserats av personal med nuvarande ABI-metod för resistensbestämning och sedan analyserats på Panther Fusion. Nuvarande ABI-metod resulterade i positiv signal för 91% (50/55) av patientprover positiva vid M. genitalium analys och makrolidresistensmutation hos 25 % (14/55), medan Panther Fusion metoden resulterade i positiv signal för 81 % (45/55) av positiva M. genitalium prover och påvisade resistensmutation hos 20 % (11/55) av proverna.
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Age Matters: Community Assembly in the Pig Fecal Microbiome in the First Month of LifeJurburg, Stephanie D., Bossers, Alex 27 March 2023 (has links)
Despite the wealth of research into strategies for microbiome modulation, studies of
microbiome management in pig hosts have found mixed results. A refined understanding
of the patterns of microbiome assembly during the host’s early life, when management
strategies are most commonly applied, is necessary for the development of successful
management practices. Here, we study the development of the pig gut microbial
community in a monitoring experiment, sampling the microbiome of pigs in a commercial
farm intensively during the first month of life. We found that the community’s
taxonomic richness increased linearly with host age. Furthermore, rapid changes across
communities occurred in stages, and non-linear patterns in relative abundance were
commonly observed among dominant taxa across host age, consistent with primary
succession. Our results highlight the importance of understanding the patterns of
microbiome assembly during host development, and identify successional stages as
windows of opportunity for future research.
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COMPARATIVE STUDY OF CYANOBACTERIA OF DESERT AND SEMI-DESERT CRUSTS OF TWO DIFFERENT CONTINENTS: AFRICA (ETHIOPIA) AND NORTH AMERICA (USA)Mesfin, Melaku 02 July 2009 (has links)
No description available.
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Identification of Rhizobial Symbionts Associated with Lupinus SPPBeligala, Dilshan Harshajith 24 July 2015 (has links)
No description available.
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The Kinetics, Biochemical Patterns, and Microbial Ecology in Multiredox (Anoxic, Microaerobic, Aerobic) Activated Sludge Systems Treating BTX Containing WastewaterMa, Guihua 08 September 1999 (has links)
BTX biodegradation rates, biochemical expression patterns and microbial ecology were studied under anoxic (denitrifying), anoxic/microaerobic/aerobic, and anoxic/microaerobic conditions in activated sludge sequencing batch reactors. The studies showed that toluene and m-xylene were denitrified via benzoyl-CoA reductase. Although benzene, o-, and p-xylene were recalcitrant under denitrifying conditions, they were biodegraded under microaerobic (< 0.2 mg/L dissolved oxygen) and nitrate or nitrite (NOx)-supplemented microaerobic conditions. The patterns of the specific enzymes associated with BTX biodegradation under microaerobic conditions indicated that the three compounds were metabolized by oxygen-dependent pathways. The expression levels of catechol 1, 2-dioxygenase and catechol 2, 3-dioxygenase under microaerobic conditions were induced to levels as high as under aerobic conditions (> 4 mg/L dissolved oxygen). Benzene, o-, and p-xylene biodegradation rates were twice as fast under NO<sub>x</sub>-supplemented compared to NO<sub>x</sub>-free microaerobic conditions, and the specific biodegradation rates under aerobic and NO<sub>x</sub>-supplemented microaerobic conditions were comparable.
16S rRNA probes targeting representative toluene-degraders were used to investigate the microbial communities in the three sequencing batch reactors by using a dot blot hybridization technique. The hybridization results suggest that multiple redox environments fostered a more diverse microbial community and the activities of the target organisms in the reactors with multiple redox environments were higher than in the single redox reactor. Additionally, facultative toluene-degraders appeared to play a less significant role than the strict anoxic and aerobic toluene-degraders in all three SBRs. / Ph. D.
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