Eucalyptus trees are a significant source of fuelwood, timber and raw material for the paper and pulp industry. In South Africa, Eucalyptus grandis and its hybrids are in high demand due to their fast growth and suitability of their timber for a wide range of products. Breeding and selection for superior quality eucalypts could sustain this high demand through selection and subsequent multiplication of superior genotypes and their use in controlled crosses. However, for this to be successful, a wide genepool must be available and maintained. Germplasm conservation of both vegetative and sexual material is therefore an integral part of such activities. However, in the case of trees, in vivo conservation practices are expensive and hazardous. The aim of this project was therefore to establish alternative conservation strategies for short-to-medium and long-term use of Eucalyptus spp. to facilitate on-going breeding and clonal programmes. For short-to-medium term storage, shoot cultures were subjected to various minimal growth conditions. Of the investigated treatments, reducing nutrients was the best storage method and shoots were maintained for 10 months with multiplication rates of 13.75 ± 7.05 shoots/explant. Encapsulated axillary buds were stored in jars at 10 °C or 28 °C. Of these two treatments, viability was sustained for longer (6 months) at 4 °C. Before establishing pollen storage regimes, viability assessment methods were evaluated and these consisted of in vitro germination on a BK (Brewbaker and Kwack, 1963) medium for 24 hours (26 ± 3.0%) and staining with two tetrazolium salts. Medium-term storage of pollen was best achieved by maintenance in the fridge (4 °C) without any desiccating substance (8 months at 6.73 ± 1.21%). Cryopreservation protocols were investigated for axillary buds and pollen. Buds that were 2 mm long were pretreated with chemical cryoprotectants, and a mixture of DMSO (dimethylsulphoxide) and glycerol was found to induce high survival rates (63%) after washing with MS (Murashige and Skoog, 1962) and 4 g.l-1 sucrose solution. Explants precultured in 1M sucrose showed increased tolerance (explant retained high survival rates of 80%) when desiccated to 20% moisture content fresh weight basis (fwb). Although pretreatments were successfully established, explants did not survive storage in liquid nitrogen indicating the need for further optimization of protocols. Pollen was successfully cryopreserved for 12 months with 23% survival rates. Applications and future research strategies of the developed protocols to Eucalyptus breeding programmes are discussed. / Thesis (M.Sc.)-University of Natal, Durban, 1998.

Araucaria cunninghamii is an ancient tropical conifer with substantial value as a forestry species in Australia and Papua New Guinea, and has been subject to a genetic improvement program for more than 50 years. This study was undertaken to demonstrate the utility of quantitative genetic analysis in describing the genetic architecture of commercial traits in A. cunninghamii. Linkage maps were prepared using the pseudotestcross strategy in what was believed to be a wide interprovenance cross using microsatellites and AFLP. A very low rate of marker polymorphism and limited differentiation between the parental provenances was identified, resulting in low mapping efficiency. The population genetic structure of A. cunninghamii was assessed to establish the underlying causes for the limited differentiation and low marker heterozygosity and assess the implications for future analysis of quantitative traits. Despite the limited mapping efficiency, genetic maps were generated for both parents. The maternal map for individual H15 contained 14 linkage groups comprising of 51 AFLP and one microsatellite. The map covered 1290 cM, representing 89% of the estimated genome size. The paternal map for individual Gil24 was 633 cM, consisting of eight linkage groups. Genetic architecture of quantitative traits was examined with putative QTL identified for height, DBH and stem straightness; one was highly significant (p<0.01), three significant (0.01<p<0.05) and 13 suggestive (p<0.10). Significant QTL each accounted for 7-11% of the phenotypic variance with a high allele substitution effect (0.63-0.81). These QTL were likely to be associated with genes of moderate effect. The suggestive QTL each accounted for 3-6% of the phenotypic variance with an allele substitution effect of 0.40-0.63. Three genomic regions contributed to the expression of multiple traits at multiple ages. Stable QTL had decreasing phenotypic effects with increasing age. The population genetic survey characterised low levels of allelic diversity across the geographic range. Three broad regions were characterised; Papua New Guinea, Cape York and northern Queensland to NSW. There was limited differentiation between provenances within these regions, and high diversity within provenances. Limited genetic differentiation between provenances seems to be the result of genetic stability due to long overlapping generations, limited founder effects and a very low mutation rate. The latter may also contribute the low heterozygosity. Limited marker polymorphism and limited differentiation between provenances within broad regions are common features in A. cunninghamii. Therefore careful parental selection and alternative experimental approaches will be required before undertaking further analysis of quantitative traits.

Orientador: Rinaldo Cesar de Paula / Banca: Dilermando Perecin / Banca: Miguel Luiz Menezes Freitas / Resumo: Com o objetivo de avaliar a eficiência da seleção precoce e tamanho ótimo de parcelas em Eucalyptus spp., foram usados dados de dois testes clonais avaliados quanto ao crescimento em altura (ALT), diâmetro à altura do peito (DAP) e volume individual de madeira (VOL) aos 25, 50 e 72 meses de idade. O delineamento experimental nos dois testes clonais foi o de blocos casualizados, com 30 tratamentos (clones), seis repetições, sendo um deles com seis plantas por parcelas (teste clonal 1) e o outro com 10 plantas (teste clonal 2). Foram obtidas as estimativas de coeficiente de determinação genotípico e de correlações genotípicas entre os caracteres nas idades juvenis e na idade de rotação. Para verificar a viabilidade da aplicação da seleção precoce foi simulada a seleção de 30% dos clones nas idades juvenis e na idade de rotação, para cada um dos caracteres e idades avaliadas, obtendo-se as estimativas de ganhos com a seleção direta e indireta. Para verificar o tamanho de parcelas, foi utilizado o coeficiente de repetibilidade calculado através dos métodos: Análise de Variância, dos Componentes Principais e o de Análise Estrutural, os dois últimos calculados através da matriz de correlação. Houve diferenças significativas entre os clones avaliados nos dois experimentos para todos os caracteres e idades. Com os resultados obtidos, recomenda-se a seleção precoce sobre DAP praticada em torno de dois anos de idade. O uso de seis repetições constituídas de pelo menos quatro plantas por parcela e a avaliação em apenas uma idade proporciona coeficiente de determinação superior a 80%. / Abstract: Aiming evaluate the Eucalyptus spp. early selection efficiency and optimum size of plots, were used data of height, diameter at breast height and individual wood volume evaluated in two clonal tests at 25, 50, and 72 months old. The experimental design in both clonal tests was randomized blocks, using 30 treatments (clones), 6 replications, at 3.0 x 3.0m spacing and linear plots, and one of them with 6 plants per plot (clonal test 1) and the other with 10 plants (clonal test 2). Variance analysis to each trait and age was done to each experiment. The estimates of genotypic determination coefficient and the correlation between the early and mature age traits were obtained. To check the viability of early selection, was simulated the selection in young and mature age, adopting 30% of selection to each one of the traits and ages evaluated, estimating the gains by the direct and indirect selection. To check the size of plots, we used the repeatability coefficient calculated by the methods: Analysis of Variance, and the Principal Components of Structural Analysis, the last two calculated through the matrix of correlation. There were significant differences among clones evaluated in the two experiments to all traits and ages. From the results obtained is suggested the practice of early selection from 2 years old age to eucalyptus clonal tests. The use of six replications consisting of at least four plants per plot and evaluation at one age provides a coefficient of determination more than 80%. / Mestre

Resumo: O objetivo deste estudo foi estimar parâmetros genéticos para caracteres de crescimento e forma em um teste de progênies de Eucalyptus cloeziana, com 24 anos de idade, estabelecido em Luiz Antônio, SP. O teste foi instalado com sementes de polinização aberta provenientes de 35 árvores matrizes oriundas de Helenvale e Cardwell St. Forest, Austrália. O delineamento experimental utilizado foi o de blocos ao acaso, com parcela composta por apenas uma planta, com 100 repetições. O ensaio foi mensurado aos 24 anos de idade para diâmetro a altura do peito (DAP), altura total, volume e forma. Foram detectadas diferenças significativas entre progênies para todos os caracteres avaliados. Foram detectados altos coeficientes de variação genética e herdabilidade para todos os caracteres estudados, o que demonstra um forte controle genético na herança destes e a possibilidade de se obter altos ganhos com a seleção massal e individual entre e dentro de progênies. Os ganhos esperados para plantios com 24 anos de idade, realizados em locais com as mesmas características ambientais de Luiz Antônio e com sementes coletadas após a seleção no teste de progênies, foram estimados em 42,91% para DAP e 16,82% para altura / Abstract: The aim of this study was to estimate genetic parameter for growth and stem shape traits in a progeny test of Eucalyptus cloeziana, at 24 years old, established in Luiz Antônio, SP. The trial was established with open-pollinated seeds from 35 mother trees from provenances Helenvale and Cardwell St. Forest, Australia. The trial was established in a random block design, with single tree plots and 100 replications. The trial was measured at 24 years old of age for diameter at breast height (DBH), total height, volume and stem shape. All studied traits presented significant differences among progenies. All studied traits presented also high coefficient of variation and heritability, showing a strong genetic control in this traits and the possibility to obtain genetic gains by massal and among and within progenies selection. The expected genetic gains for stands with 24 years old, growing in sites with the same environmental characteristics of Luiz Antônio and with seeds collected after selection in the progeny test were estimated in 42.91% for DAP and 16.82% for height / Orientador: Miguel Luiz Menezes Freitas / Coorientador: Mario Luiz Teixeira de Moraes / Banca: Walter Veriano Valério Filho / Banca: Rinaldo César de Paula / Mestre

Made available in DSpace on 2014-06-11T19:29:42Z (GMT). No. of bitstreams: 0 Previous issue date: 2010-03-26Bitstream added on 2014-06-13T21:00:02Z : No. of bitstreams: 1 berti_clf_me_ilha.pdf: 1147349 bytes, checksum: 79588686dea2715fc03a56db3c25b881 (MD5) / Universidade Estadual Paulista (UNESP) / O objetivo deste estudo foi estimar parâmetros genéticos para caracteres de crescimento e forma em um teste de progênies de Eucalyptus cloeziana, com 24 anos de idade, estabelecido em Luiz Antônio, SP. O teste foi instalado com sementes de polinização aberta provenientes de 35 árvores matrizes oriundas de Helenvale e Cardwell St. Forest, Austrália. O delineamento experimental utilizado foi o de blocos ao acaso, com parcela composta por apenas uma planta, com 100 repetições. O ensaio foi mensurado aos 24 anos de idade para diâmetro a altura do peito (DAP), altura total, volume e forma. Foram detectadas diferenças significativas entre progênies para todos os caracteres avaliados. Foram detectados altos coeficientes de variação genética e herdabilidade para todos os caracteres estudados, o que demonstra um forte controle genético na herança destes e a possibilidade de se obter altos ganhos com a seleção massal e individual entre e dentro de progênies. Os ganhos esperados para plantios com 24 anos de idade, realizados em locais com as mesmas características ambientais de Luiz Antônio e com sementes coletadas após a seleção no teste de progênies, foram estimados em 42,91% para DAP e 16,82% para altura / The aim of this study was to estimate genetic parameter for growth and stem shape traits in a progeny test of Eucalyptus cloeziana, at 24 years old, established in Luiz Antônio, SP. The trial was established with open-pollinated seeds from 35 mother trees from provenances Helenvale and Cardwell St. Forest, Australia. The trial was established in a random block design, with single tree plots and 100 replications. The trial was measured at 24 years old of age for diameter at breast height (DBH), total height, volume and stem shape. All studied traits presented significant differences among progenies. All studied traits presented also high coefficient of variation and heritability, showing a strong genetic control in this traits and the possibility to obtain genetic gains by massal and among and within progenies selection. The expected genetic gains for stands with 24 years old, growing in sites with the same environmental characteristics of Luiz Antônio and with seeds collected after selection in the progeny test were estimated in 42.91% for DAP and 16.82% for height

Made available in DSpace on 2014-06-11T19:26:08Z (GMT). No. of bitstreams: 0 Previous issue date: 2008-12-01Bitstream added on 2014-06-13T18:54:07Z : No. of bitstreams: 1 massaro_ram_me_jabo.pdf: 216510 bytes, checksum: 2763687448a6171d058929194d17b2a2 (MD5) / Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) / Com o objetivo de avaliar a eficiência da seleção precoce e tamanho ótimo de parcelas em Eucalyptus spp., foram usados dados de dois testes clonais avaliados quanto ao crescimento em altura (ALT), diâmetro à altura do peito (DAP) e volume individual de madeira (VOL) aos 25, 50 e 72 meses de idade. O delineamento experimental nos dois testes clonais foi o de blocos casualizados, com 30 tratamentos (clones), seis repetições, sendo um deles com seis plantas por parcelas (teste clonal 1) e o outro com 10 plantas (teste clonal 2). Foram obtidas as estimativas de coeficiente de determinação genotípico e de correlações genotípicas entre os caracteres nas idades juvenis e na idade de rotação. Para verificar a viabilidade da aplicação da seleção precoce foi simulada a seleção de 30% dos clones nas idades juvenis e na idade de rotação, para cada um dos caracteres e idades avaliadas, obtendo-se as estimativas de ganhos com a seleção direta e indireta. Para verificar o tamanho de parcelas, foi utilizado o coeficiente de repetibilidade calculado através dos métodos: Análise de Variância, dos Componentes Principais e o de Análise Estrutural, os dois últimos calculados através da matriz de correlação. Houve diferenças significativas entre os clones avaliados nos dois experimentos para todos os caracteres e idades. Com os resultados obtidos, recomenda-se a seleção precoce sobre DAP praticada em torno de dois anos de idade. O uso de seis repetições constituídas de pelo menos quatro plantas por parcela e a avaliação em apenas uma idade proporciona coeficiente de determinação superior a 80%. / Aiming evaluate the Eucalyptus spp. early selection efficiency and optimum size of plots, were used data of height, diameter at breast height and individual wood volume evaluated in two clonal tests at 25, 50, and 72 months old. The experimental design in both clonal tests was randomized blocks, using 30 treatments (clones), 6 replications, at 3.0 x 3.0m spacing and linear plots, and one of them with 6 plants per plot (clonal test 1) and the other with 10 plants (clonal test 2). Variance analysis to each trait and age was done to each experiment. The estimates of genotypic determination coefficient and the correlation between the early and mature age traits were obtained. To check the viability of early selection, was simulated the selection in young and mature age, adopting 30% of selection to each one of the traits and ages evaluated, estimating the gains by the direct and indirect selection. To check the size of plots, we used the repeatability coefficient calculated by the methods: Analysis of Variance, and the Principal Components of Structural Analysis, the last two calculated through the matrix of correlation. There were significant differences among clones evaluated in the two experiments to all traits and ages. From the results obtained is suggested the practice of early selection from 2 years old age to eucalyptus clonal tests. The use of six replications consisting of at least four plants per plot and evaluation at one age provides a coefficient of determination more than 80%.

Decades of tree improvement has resulted in genetic gains in loblolly pine productivity, form, and resistance to fusiform rust. The goal of this study was to advance the understanding and applied use of genetic improvement by analyzing inter- and intra-provenances hybrids’ rust resistance and evaluating midrotation performance of varying levels of genetically improved stock types. The first study compares 16 seedlots at the USDA Resistance Screening Center and evaluates rust resistance of controlled-pollinated inter- and intra-provenances crosses, and openpollinated seedlots from three provenances: Western Gulf, Atlantic Coastal, and Interior Piedmont. Post inoculation, one Coastal OP seedlot was resistant and ten of the seedlots were susceptible to the disease. The second study compares three levels of improved stock types: second-generation open-pollinated, controlled pollinated, and varietal material. After the fifteenth growing season, all three improved stock types were not significantly different from one another in defects, height, diameter, volume, and exhibited site index.

<div>Anthropogenically driven global change is disrupting ecosystems and habitats of many plant species, straining the ability of native species to survive and reproduce. The overarching goal of this research was to holistically work towards restoration of a threatened tree species by connecting research from different disciplines. In order to do so, the threatened butternut tree (<i>Juglans cinerea</i>) and its hybrids were used as a case study. Hybridization can incorporate stress tolerance in plants and could be a potential restoration tool. Evidence in some wild butternut populations indicates that naturalized hybrids of butternut with Japanese walnut (<i>Juglans ailantifolia</i>) may be more tolerant to butternut canker disease (BCD) than butternut, but this has not been formally tested. Thus, chapter 2 examined potential BCD tolerance within and between unadmixed and hybrid butternut inoculated with two BCD fungal isolates. Differences in canker growth were observed by fungal isolate, which could help to explain some differences in BCD severity found among butternut populations. Smaller and fewer cankers and greater genetic gains were detected in hybrid families, demonstrating that hybrids warrant further evaluation as a possible breeding tool for developing BCD-resistant butternut trees.</div><div>However, even with increased disease tolerance, hybrids must possess similar ecophysiological tolerances to their native progenitor to be an effective replacement. Butternut is extremely cold hardy, but Japanese walnuts are native to a warmer ecosystem, indicating potential disparities in extreme temperature tolerances between the two species and their hybrids. Thus, samples from mature trees were subjected to cold and heat treatments to compare relative extreme temperature tolerances within butternut and between butternut, Japanese walnut, and their hybrids. Within butternut, trees from colder areas exhibited less cold damage than those from warmer areas. Differences in heat damage among provenances occurred but did not follow a clear trend. Butternut exhibited greatest cold tolerance, Japanese walnut exhibited greatest heat tolerance, and hybrids were intermediate. Thus, the utility of hybrids for restoration could be limited at the extremes of the species’ distributions.</div><div>A second, but different type of freeze test was conducted for chapter 4 using seedlings to gain a more nuanced understanding of cold tolerance within butternut and between butternut and its hybrids. No survival or damage differences were detected in butternut provenances, although seedlings from the coldest provenances experienced more delayed budbreak at the two warmest treatments than those from warmer provenances. Interspecific differences were not observed in dieback but were detected in survival and budbreak. The hybrids had greater survival than butternut from warmer provenances at the lowest temperature treatment (-38 °C), but given that temperatures that low are extremely unlikely to occur in those provenances, it is not anticipated to give the hybrids an advantage if planted in those areas. However, the hybrids’ earlier budbreak could limit the success of restoration with these hybrids in the coldest extents of butternut’s range. </div><div>If hybrids, as well as genetically modified (GM) trees, are successfully developed for effective disease tolerance and to serve as an ecologically suitable replacement, success of restoration using hybrids will ultimately depend on those directly responsible for replanting efforts. A survey was administered to land managers in 46 organizations in Indiana to gauge perceptions of hybrid and GM trees, as well as current use of hybrid trees. Land managers had stronger concern for ecological, rather than economic, issues. Agreement was highest for using hybrid and GM trees for “conservation and restoration of at-risk species”, “timber production”, and “non-timber products (fruit, syrup, etc.)”. However, perceptions varied by characteristics, such as concern type, age, and the type of land they managed. Ecological concern and the type of land being managed most strongly predicted current hybrid use. Overall, results indicate the majority of land managers in Indiana would likely be agreeable to recommendations towards using hybrids. However, most nonetheless had strong ecological concerns about their suitability as a native replacement. It is important to note, though, that consistent with the results of previous studies, great variation was seen within the performance and characteristics of the butternut hybrids in chapters 2-4. Thus, it may be possible with careful selection and breeding to harness this variation to develop disease tolerant and ecologically similar hybrids acceptable to land managers.</div>