Farmed Southern Bluefin Tuna (SBT) (Thunnus maccoyii) is an important export product for South Australia (SA). It is exported to Japan, China, Korea and the United States for the sushi and sashimi markets. The primary purpose of SBT farming in SA is to fatten wild-caught juvenile fish (2-4 years of age with initial mean weights between 12-20 kg) over a period of approximately five months by feeding a selection of baitfish types. Farmers, farm managers and consumers of SBT all have an interest in managing chemical residues that have the potential to biomagnify in the fatty tissue of the farmed SBT fillets. Of particular interest are chemical residues of polychlorinated biphenyls (PCBs) and polychlorinated dibenzo-p-dioxins / dibenzofurans (PCDD/Fs). This research presents the investigations and experimental validation of a predictive model that can be used to address the levels of residues in the fillets of farmed SBT at harvest from feeding (as the source) when applied to SBT aquaculture. An additional industry-focussed aim of this research was to determine if a Longer Term Holding (LTH) farming period, with a duration of an extra 12 months after a typical farming period of approximately five months, could produce SBT with higher condition index (CI) and lipid content, while keeping levels of PCBs and PCDD/Fs low, compared to the typical farming period. The justification for this research is that an adequate quantitative model is essential to help industry achieve targeted concentrations in the final fillet product by making scientific-based decisions on baitfish selection (baitfish strategies for the feeding of SBT), and longer term, to confidently demonstrate to local markets and importing countries that Australia is actively managing levels of PCBs and PCDD/Fs in farmed SBT, to ensure a high quality and safe product is delivered to the consumer. The novelty of this research is underpinned by four integrated stages, and the criteria for an adequate model established. The important criteria included: accurate predictions versus observed data demonstrated through the analysis of residual plots, potential physiological interpretation of model coefficients, parsimony – the model should be as simple as possible (but no simpler) and that the model should be easy to use. Firstly, a logical starting point was the development of a risk framework for residues in SBT. The developed framework was based on conventional principles of microbiological risk assessment highlighted in Codex Alimentarius. The risk framework consists of five governing principles: hazard identification, hazard characterisation, exposure assessment, risk characterisation and model validation. The advantages of the risk framework is that it provides a systematic research approach and permits information to be handled unambiguously, especially important for the niche SBT industry where chemical residue research is carried out for the first time. Secondly, because of a lack of available scientific data in context of this research, commercial-scale experimental field data for levels of PCBs and PCDD/Fs in typical farmed SBT as affected by feeding and growth were collected over 17 months at seven time intervals from Farm Delta Fishing Pty Ltd in 2005/06 (n = 50). Field data from another commercial company, Farm Alpha Fishing Pty Ltd, was collected over the typical farming period specific to this company, spanning 15 weeks at three time intervals in 2006, for validation work (n = 15). The data obtained from Farm Delta Fishing Pty Ltd revealed that whole weight of farmed SBT increased from 18.5 kg to 30.3 kg for a typical farming period, and subsequently to 41.0 kg by the end of the LTH farming period. A maximum mean CI of 24.0 ± 0.5 kg.m⁻³ and a maximum mean lipid content of 17.6 ± 0.5% was achieved at the third time interval of the typical farming period, for the baitfish types and ratios used as feed. There were no significant differences in the CI and lipid between the final harvests of the typical farming and LTH periods, i.e. even after an additional 12 months of farming. PCB and PCDD/F concentrations, however, increased between the final harvests of the typical farming and LTH periods. The data indicated that a typical farming period was sufficient to achieve a maximum CI and lipid content with lower concentrations of PCBs and PCDD/Fs in the fillets relative to the LTH farming period. For the third stage of this research, a quantitative model was synthesised and applied to the PCB and PCDD/F (2,3,7,8-TeCDF) data detected in farmed SBT fillets. Assimilation efficiencies for PCBs and 2,3,7,8-TeCDF in the fillets of SBT were obtained. An assimilation efficiency, or percentage retention (efficiency expressed as a percentage), in the fillet of SBT is a measure of the uptake of a chemical residue from food (baitfish) to the SBT fillet. For the WHO-PCBs, assimilation efficiencies based on SBT fillets ranged between 19.1 – 35.3 % with the exception of PCB 169. The highest assimilation efficiency of 35.3 %, with a range of 30.4 – 40.3 % (at the 95 % confidence level) was attributed to the most toxic PCB congener, PCB 126. An assimilation efficiency of 39.2 % was determined in SBT fillets for the congener 2,3,7,8-TeCDF, which was higher than the assimilation efficiencies determined for the WHO-PCB congeners. A residual plot as predicted value versus observed value indicated that the predictive model was neither under- or over-parameterised. However, when the predictive model was assessed against the data set from Farm Alpha Pty Ltd, the model over-predicted the actual PCB and PCDD/F concentrations. The over-prediction is attributed to possible overfeeding of SBT farmed by Farm Alpha Fishing Pty Ltd. From a food safety point of view, in the absence of ideal predictions because of a lack of ideal validation data sets, an over-prediction instead of under-prediction is preferred. In the fourth stage, the practical application of the predictive model was demonstrated. Because SBT fillets are retailed as tissue group-specific, i.e. akami (low fat), chu-toro (medium fat) and otoro (high fat) fillets, PCB and PCDD/F analyses were carried out on the three tissue groups for selected SBT (n = 7). Dietary modelling on SBT consumption in humans was carried out using findings from the predictive model and tissue-specific data. The baitfish strategy employed for the feeding of farmed SBT consequently affects dietary exposure to SBT consumers. Exposure to PCBs and PCDD/Fs is approximately seven times lower for the consumption of a skin-free, boneless akami fillet than for a comparable otoro fillet of the same size. This dietary exposure assessment accounted only for consumption of SBT tissue-specific fillets. The experimental field study and modelling work on PCB and PCDD/F concentrations in farmed SBT (fillets) outlined in this thesis importantly directs the need to re-evaluate a specific model to better cater for SBT farming practices where SBT fillets are produced for human consumption. Because conditions that normally pertain to commercial farming of wild-caught fish were studied, findings should be of interest to industries where other species of fish (for food) are farmed in sea-cages in the open ocean. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1342453 / Thesis (Ph.D.) -- University of Adelaide, School of Chemical Engineering, 2008

Farmed Southern Bluefin Tuna (SBT) (Thunnus maccoyii) is an important export product for South Australia (SA). It is exported to Japan, China, Korea and the United States for the sushi and sashimi markets. The primary purpose of SBT farming in SA is to fatten wild-caught juvenile fish (2-4 years of age with initial mean weights between 12-20 kg) over a period of approximately five months by feeding a selection of baitfish types. Farmers, farm managers and consumers of SBT all have an interest in managing chemical residues that have the potential to biomagnify in the fatty tissue of the farmed SBT fillets. Of particular interest are chemical residues of polychlorinated biphenyls (PCBs) and polychlorinated dibenzo-p-dioxins / dibenzofurans (PCDD/Fs). This research presents the investigations and experimental validation of a predictive model that can be used to address the levels of residues in the fillets of farmed SBT at harvest from feeding (as the source) when applied to SBT aquaculture. An additional industry-focussed aim of this research was to determine if a Longer Term Holding (LTH) farming period, with a duration of an extra 12 months after a typical farming period of approximately five months, could produce SBT with higher condition index (CI) and lipid content, while keeping levels of PCBs and PCDD/Fs low, compared to the typical farming period. The justification for this research is that an adequate quantitative model is essential to help industry achieve targeted concentrations in the final fillet product by making scientific-based decisions on baitfish selection (baitfish strategies for the feeding of SBT), and longer term, to confidently demonstrate to local markets and importing countries that Australia is actively managing levels of PCBs and PCDD/Fs in farmed SBT, to ensure a high quality and safe product is delivered to the consumer. The novelty of this research is underpinned by four integrated stages, and the criteria for an adequate model established. The important criteria included: accurate predictions versus observed data demonstrated through the analysis of residual plots, potential physiological interpretation of model coefficients, parsimony – the model should be as simple as possible (but no simpler) and that the model should be easy to use. Firstly, a logical starting point was the development of a risk framework for residues in SBT. The developed framework was based on conventional principles of microbiological risk assessment highlighted in Codex Alimentarius. The risk framework consists of five governing principles: hazard identification, hazard characterisation, exposure assessment, risk characterisation and model validation. The advantages of the risk framework is that it provides a systematic research approach and permits information to be handled unambiguously, especially important for the niche SBT industry where chemical residue research is carried out for the first time. Secondly, because of a lack of available scientific data in context of this research, commercial-scale experimental field data for levels of PCBs and PCDD/Fs in typical farmed SBT as affected by feeding and growth were collected over 17 months at seven time intervals from Farm Delta Fishing Pty Ltd in 2005/06 (n = 50). Field data from another commercial company, Farm Alpha Fishing Pty Ltd, was collected over the typical farming period specific to this company, spanning 15 weeks at three time intervals in 2006, for validation work (n = 15). The data obtained from Farm Delta Fishing Pty Ltd revealed that whole weight of farmed SBT increased from 18.5 kg to 30.3 kg for a typical farming period, and subsequently to 41.0 kg by the end of the LTH farming period. A maximum mean CI of 24.0 ± 0.5 kg.m⁻³ and a maximum mean lipid content of 17.6 ± 0.5% was achieved at the third time interval of the typical farming period, for the baitfish types and ratios used as feed. There were no significant differences in the CI and lipid between the final harvests of the typical farming and LTH periods, i.e. even after an additional 12 months of farming. PCB and PCDD/F concentrations, however, increased between the final harvests of the typical farming and LTH periods. The data indicated that a typical farming period was sufficient to achieve a maximum CI and lipid content with lower concentrations of PCBs and PCDD/Fs in the fillets relative to the LTH farming period. For the third stage of this research, a quantitative model was synthesised and applied to the PCB and PCDD/F (2,3,7,8-TeCDF) data detected in farmed SBT fillets. Assimilation efficiencies for PCBs and 2,3,7,8-TeCDF in the fillets of SBT were obtained. An assimilation efficiency, or percentage retention (efficiency expressed as a percentage), in the fillet of SBT is a measure of the uptake of a chemical residue from food (baitfish) to the SBT fillet. For the WHO-PCBs, assimilation efficiencies based on SBT fillets ranged between 19.1 – 35.3 % with the exception of PCB 169. The highest assimilation efficiency of 35.3 %, with a range of 30.4 – 40.3 % (at the 95 % confidence level) was attributed to the most toxic PCB congener, PCB 126. An assimilation efficiency of 39.2 % was determined in SBT fillets for the congener 2,3,7,8-TeCDF, which was higher than the assimilation efficiencies determined for the WHO-PCB congeners. A residual plot as predicted value versus observed value indicated that the predictive model was neither under- or over-parameterised. However, when the predictive model was assessed against the data set from Farm Alpha Pty Ltd, the model over-predicted the actual PCB and PCDD/F concentrations. The over-prediction is attributed to possible overfeeding of SBT farmed by Farm Alpha Fishing Pty Ltd. From a food safety point of view, in the absence of ideal predictions because of a lack of ideal validation data sets, an over-prediction instead of under-prediction is preferred. In the fourth stage, the practical application of the predictive model was demonstrated. Because SBT fillets are retailed as tissue group-specific, i.e. akami (low fat), chu-toro (medium fat) and otoro (high fat) fillets, PCB and PCDD/F analyses were carried out on the three tissue groups for selected SBT (n = 7). Dietary modelling on SBT consumption in humans was carried out using findings from the predictive model and tissue-specific data. The baitfish strategy employed for the feeding of farmed SBT consequently affects dietary exposure to SBT consumers. Exposure to PCBs and PCDD/Fs is approximately seven times lower for the consumption of a skin-free, boneless akami fillet than for a comparable otoro fillet of the same size. This dietary exposure assessment accounted only for consumption of SBT tissue-specific fillets. The experimental field study and modelling work on PCB and PCDD/F concentrations in farmed SBT (fillets) outlined in this thesis importantly directs the need to re-evaluate a specific model to better cater for SBT farming practices where SBT fillets are produced for human consumption. Because conditions that normally pertain to commercial farming of wild-caught fish were studied, findings should be of interest to industries where other species of fish (for food) are farmed in sea-cages in the open ocean. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1342453 / Thesis (Ph.D.) -- University of Adelaide, School of Chemical Engineering, 2008

Farmed Southern Bluefin Tuna (SBT) (Thunnus maccoyii) is an important export product for South Australia (SA). It is exported to Japan, China, Korea and the United States for the sushi and sashimi markets. The primary purpose of SBT farming in SA is to fatten wild-caught juvenile fish (2-4 years of age with initial mean weights between 12-20 kg) over a period of approximately five months by feeding a selection of baitfish types. Farmers, farm managers and consumers of SBT all have an interest in managing chemical residues that have the potential to biomagnify in the fatty tissue of the farmed SBT fillets. Of particular interest are chemical residues of polychlorinated biphenyls (PCBs) and polychlorinated dibenzo-p-dioxins / dibenzofurans (PCDD/Fs). This research presents the investigations and experimental validation of a predictive model that can be used to address the levels of residues in the fillets of farmed SBT at harvest from feeding (as the source) when applied to SBT aquaculture. An additional industry-focussed aim of this research was to determine if a Longer Term Holding (LTH) farming period, with a duration of an extra 12 months after a typical farming period of approximately five months, could produce SBT with higher condition index (CI) and lipid content, while keeping levels of PCBs and PCDD/Fs low, compared to the typical farming period. The justification for this research is that an adequate quantitative model is essential to help industry achieve targeted concentrations in the final fillet product by making scientific-based decisions on baitfish selection (baitfish strategies for the feeding of SBT), and longer term, to confidently demonstrate to local markets and importing countries that Australia is actively managing levels of PCBs and PCDD/Fs in farmed SBT, to ensure a high quality and safe product is delivered to the consumer. The novelty of this research is underpinned by four integrated stages, and the criteria for an adequate model established. The important criteria included: accurate predictions versus observed data demonstrated through the analysis of residual plots, potential physiological interpretation of model coefficients, parsimony – the model should be as simple as possible (but no simpler) and that the model should be easy to use. Firstly, a logical starting point was the development of a risk framework for residues in SBT. The developed framework was based on conventional principles of microbiological risk assessment highlighted in Codex Alimentarius. The risk framework consists of five governing principles: hazard identification, hazard characterisation, exposure assessment, risk characterisation and model validation. The advantages of the risk framework is that it provides a systematic research approach and permits information to be handled unambiguously, especially important for the niche SBT industry where chemical residue research is carried out for the first time. Secondly, because of a lack of available scientific data in context of this research, commercial-scale experimental field data for levels of PCBs and PCDD/Fs in typical farmed SBT as affected by feeding and growth were collected over 17 months at seven time intervals from Farm Delta Fishing Pty Ltd in 2005/06 (n = 50). Field data from another commercial company, Farm Alpha Fishing Pty Ltd, was collected over the typical farming period specific to this company, spanning 15 weeks at three time intervals in 2006, for validation work (n = 15). The data obtained from Farm Delta Fishing Pty Ltd revealed that whole weight of farmed SBT increased from 18.5 kg to 30.3 kg for a typical farming period, and subsequently to 41.0 kg by the end of the LTH farming period. A maximum mean CI of 24.0 ± 0.5 kg.m⁻³ and a maximum mean lipid content of 17.6 ± 0.5% was achieved at the third time interval of the typical farming period, for the baitfish types and ratios used as feed. There were no significant differences in the CI and lipid between the final harvests of the typical farming and LTH periods, i.e. even after an additional 12 months of farming. PCB and PCDD/F concentrations, however, increased between the final harvests of the typical farming and LTH periods. The data indicated that a typical farming period was sufficient to achieve a maximum CI and lipid content with lower concentrations of PCBs and PCDD/Fs in the fillets relative to the LTH farming period. For the third stage of this research, a quantitative model was synthesised and applied to the PCB and PCDD/F (2,3,7,8-TeCDF) data detected in farmed SBT fillets. Assimilation efficiencies for PCBs and 2,3,7,8-TeCDF in the fillets of SBT were obtained. An assimilation efficiency, or percentage retention (efficiency expressed as a percentage), in the fillet of SBT is a measure of the uptake of a chemical residue from food (baitfish) to the SBT fillet. For the WHO-PCBs, assimilation efficiencies based on SBT fillets ranged between 19.1 – 35.3 % with the exception of PCB 169. The highest assimilation efficiency of 35.3 %, with a range of 30.4 – 40.3 % (at the 95 % confidence level) was attributed to the most toxic PCB congener, PCB 126. An assimilation efficiency of 39.2 % was determined in SBT fillets for the congener 2,3,7,8-TeCDF, which was higher than the assimilation efficiencies determined for the WHO-PCB congeners. A residual plot as predicted value versus observed value indicated that the predictive model was neither under- or over-parameterised. However, when the predictive model was assessed against the data set from Farm Alpha Pty Ltd, the model over-predicted the actual PCB and PCDD/F concentrations. The over-prediction is attributed to possible overfeeding of SBT farmed by Farm Alpha Fishing Pty Ltd. From a food safety point of view, in the absence of ideal predictions because of a lack of ideal validation data sets, an over-prediction instead of under-prediction is preferred. In the fourth stage, the practical application of the predictive model was demonstrated. Because SBT fillets are retailed as tissue group-specific, i.e. akami (low fat), chu-toro (medium fat) and otoro (high fat) fillets, PCB and PCDD/F analyses were carried out on the three tissue groups for selected SBT (n = 7). Dietary modelling on SBT consumption in humans was carried out using findings from the predictive model and tissue-specific data. The baitfish strategy employed for the feeding of farmed SBT consequently affects dietary exposure to SBT consumers. Exposure to PCBs and PCDD/Fs is approximately seven times lower for the consumption of a skin-free, boneless akami fillet than for a comparable otoro fillet of the same size. This dietary exposure assessment accounted only for consumption of SBT tissue-specific fillets. The experimental field study and modelling work on PCB and PCDD/F concentrations in farmed SBT (fillets) outlined in this thesis importantly directs the need to re-evaluate a specific model to better cater for SBT farming practices where SBT fillets are produced for human consumption. Because conditions that normally pertain to commercial farming of wild-caught fish were studied, findings should be of interest to industries where other species of fish (for food) are farmed in sea-cages in the open ocean. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1342453 / Thesis (Ph.D.) -- University of Adelaide, School of Chemical Engineering, 2008

Introducción: Las enfermedades hepáticas de evolución crónica degenerativa, constituyen una de las causas de morbilidad y mortalidad a nivel mundial. Objetivos: Determinar el efecto hepatoprotector del zumo de fruta del Opuntia ficus indica (tuna) variedad morada, en ratas con intoxicación hepática inducidas por paracetamol. Diseño: analíticos –experimental. Lugar: Centro de Investigación de Bioquímica y Nutrición. Participantes y materiales: se utilizaron 36 ratas machos con un peso de 269 g ±22 g. Intervenciones: el zumo se obtuvo mediante un extractor casero. La inducción fue realizada con paracetamol a la dosis de 400 mg/kg vía peroral. Principales medidas de resultados: alanina aminotransferasa (ALT U/L), aspartato amino transferasa (AST U/L), gamma glutamil transferasa (GGT U/L), bilirrubina directa, indirecta y total (mg/L), albumina sérica (g/dL), proteínas totales séricas (g/dL), especie reactiva al ácido tiobarbitúrico (TBARS suero nmol/mL e hígado nmol/g) e índice hepático (%). Resultados: la administración del zumo de Opuntia ficus indica “tuna” variedad morada redujo de forma significativa actividad del ALT en los tres grupos tratados, solo en el grupo VI la reducción fue significativa para el AST y GGT, comparados con el grupo II. Los grupos tratados con zumo de tuna V y VI expresaron concentraciones superiores a los encontrados en el grupo II, siendo esto significativo, sin embargo los niveles de proteínas totales no mostraron variaciones significativas entre ellos. Los grupos IV y V expresaron concentraciones menores de bilirrubina total respecto al grupo II, pero sin embargo los niveles de bilirrubina directa en estos grupos fueron del 31,54% y 41,67% respectivamente. Los niveles de TBARS en tejido hepático en los tres grupos tratados con zumo mostraron concentraciones inferiores al grupo II, los mismos resultados se observan en la concentración de TBARS en suero, respecto al grupo II. El índice hepático fue menor en los grupos IV y VI. Conclusiones: el zumo de Opuntia de ficus indica “tuna” variedad morada, presentó efecto hepatoprotector, expresados en vario de los indicadores del daño hepático.

Com o objetivo de avaliar a presença de Vibrio parahaemolyticus em atum, foram coletadas 112 amostras, sendo 56 durante o inverno de 2003 (junho a julho) e 56, durante o verão de 2003-2004 (dezembro a janeiro), vendidos em diversos pontos comerciais da zona sul da cidade de São Paulo. Foi determinado o Número Mais Provável (NMP) de Vibrio parahaemolyticus, comparando a contaminação observada durante os dois períodos. As cepas foram estudadas quanto à produção de urease, ao fenômeno de Kanagawa e à sensibilidade a antibióticos. Apenas 2,68% das amostras foram positivas (3/112). Dessas, duas amostras foram coletadas no verão e uma, no inverno. A amostra positiva obtida no inverno apresentou 3 NMP/g, as outras duas, coletadas durante o verão, apresentaram respectivamente, 3 e 4 NMP/g. Todas as cepas isoladas de Vibrio parahaemolyticus foram negativas ao teste de Kanagawa e não produtoras de Urease, não apresentando nenhuma característica patogênica. Todas as cepas foram resistentes a ampicilina, eritromicina, estreptomicina penicilina G, polimixina B e vancomicina. Apresentaram susceptibilidade intermediária a ciprofloxacina, kanamicina e gentamicina, e sensibilidade a ácido nalixídico, cloranfenicol e tetraciclina. Conclui-se que, nas condições desse estudo, o sashimi de atum revelou-se um alimento de baixo risco ao consumidor, no que se refere a infecção (toxigênica) por Vibrio parahaemolyticus / In order to evaluate the presence of Vibrio parahaemolyticus in tuna traded in retail stores in the south region of the city of São Paulo, 112 samples were collected, 56 during the winter of 2003 (June and July) and 56, during the summer of 2003-2004 (December to January). Most probable number (MPN) of Vibrio parahaemolyticus was determined, comparing the contamination level observed in the two periods. Strains were analyzed in relation to urease production, Kanagawa phenomenon and sensitivity to antibiotics. Only 2.68% of the samples were positive (3/112), two of them collected in the summer, and one of them, in the winter. The positive sample obtained in the winter presented 3 NMP/g, and the other two samples, collected in the summer, presented 3 and 4 NMP/g, respectively. All Vibrio parahaemolyticus samples isolated were Kanagawa, urease negative. Therefore, they did not present any pathogenic characteristic. All strains were resistant to ampicillin, erythromycin, streptomycin, penicillin G, polymyxin B and vancomycin. They presented intermediate susceptibility to ciprofloxacin, kanamycin and gentamicin, and sensitivity to nalidixic acid, chloramphenicol and tetracycline. It may be concluded that, in the conditions of this study, tuna sashimi is considered low risk food in relation to toxigenic infection by Vibrio parahaemolyticus

Le thon obèse (Thunnus obesus), le thon alabore (Thunnus albacares) et le listao (Katsuwonus pelamis) comptent parmi les espèces de thons les plus utilisées en conserve. Lors de la fabrication de conserves de thon, la substitution d'espèce et/ou le mélange de différentes espèces de thon sont interdits par la réglementation européenne. L'authentification des espèces de thon reste complexe à cause du degré de similitude élevé entre les espèces de thon, ou encore, lorsque les caractéristiques morphologiques externes sont éliminées au cours du filetage et lors de la mise en conserve. Par conséquent, des substitutions involontaires ou frauduleuses peuvent se produire. Dans cette étude, le marqueur mitochondrial du gène de la sous-unité 2 de la NADH déshydrogénase a été utilisé pour identifier le thon obèse et le gène de la sous-unité II de la cytochrome c oxydase a été utilisé pour identifier le thon albacore et le listao en utilisant la PCR en temps réel basée sur la technologie TaqMan. Deux méthodes différentes basées sur la qPCR ont été développées pour quantifier le pourcentage de chair de chaque espèce présente au sein d'une boîte de thon. La première a été basée sur la quantification absolue avec standard externe réalisée avec les deux marqueurs. La seconde a été basée sur la quantification relative avec standard externe avec le gène endogène de l'ARN 12S. Sur la base de ces résultats, nous pouvons conclure que notre méthode peut s'appliquer pour quantifier les deux espèces de thon albacore et obèse génétiquement très proches lorsqu'elles sont utilisées dans un mélange binaire en conserve. / Bigeye tuna (Thunnus obesus), yellowfin tuna (Thunnus albacares) and skipjack tuna (Katsuwonus pelanis) are among the most widely used tuna species for canning purposes. Not only substitution but also mixing of tuna species is prohibited by the European regulation for canned tuna products. However, it can be difficult to authenticate the tuna species, due to their high degree of similarity or even when the external morphological characteristics are removed due to filleting before canning. Consequently, involuntary or fraudulent substitutions may occur during the canning process. In this study, the mitochondrial marker from NADH dehydrogenase subunit 2 gene was used to identify bigeye tuna and the mitochondrial marker cytochrome c oxidase subunit II gene was used to identify yellowfin tuna and skipjack tuna, utilizing TaqMan qPCR methodology. Two different qPCR-based methods were developed to quantify the percentage of flesh of each species used for can processing. The first one was based on absolute quantification using standard curves realized with these two markers ; the second one was founded on relative quantification with the universal 12S rRNA gene as the endogenous gene. On the basis of our results, we conclude that our methodology could be applied to authenticate the two closely related tuna species (bigeye tuna and yellowfin tuna) when used in a binary mix in tuna cans.

Tesis para optar al Título Profesional de Ingeniero Agrónomo y al Grado de Magíster en Ciencias Agropecuarias Mención Producción Agroindustrial / Las betalaínas son pigmentos hidrosolubles, autorizados como aditivos por la FDA de Estados Unidos y admitidos en la Unión Europea. Son uno de los pocos pigmentos rojos naturales y presentan un doble propósito, como colorantes y antioxidantes, por lo que cabe potenciar su uso en la industria alimentaria. Una de las fuentes de betalaínas menos explotadas comercialmente son los frutos de la tuna púrpura. El objetivo de este trabajo fue determinar la estabilidad de éstos pigmentos en un yogur adicionado con micropartículas de pulpa de tuna (PT) y ultrafiltrado de tuna púrpura (UF), elaborados mediante secado por aspersión utilizando Capsul (PT-C y UF-C) y K4484 (PT-K y UF-K) como agentes encapsulantes. Para determinar la estabilidad en el yogur se cuantificó el contenido de betalaínas, color y pH, durante 10 semanas. La degradación de betacianinas y betaxantinas en el yogur siguió una cinética de primer orden para todos los sistemas, mostrando constantes de velocidad de degradación entre 7,81x10-6 - 8,67x10-6 (min-1) y de 4,60x10-6 - 6,43x10-6 (min-1), respectivamente. Además, se observó un comportamiento diferente, dependiendo de la fuente de betalaínas (PT o UF), obteniéndose menor degradación en los sistemas con pulpa en comparación con el ultrafiltrado de tuna.

The bluefin tuna have a variety of distinctive anatomical and physiological adaptations that enhance performance. However, our understanding of bluefin tuna physiology is limited by the logistical difficulties of studying these large pelagic fish. This thesis examines some aspects of the metabolic physiology of the southern bluefin tuna. It provides insight into the high-performance, high-energy demand physiology of bluefin. It also examines the metabolic physiology of the mulloway, another important aquaculture species for which physiological information is currently limited. 1. Routine metabolic rate (RMR) of southern bluefin tuna (SBT) (Thunnus maccoyii), the largest tuna specimens studied so far (body mass = 19.6 kg (± 1.9 SE)) was measured in a large (250,000 l) flexible polypropylene respirometer “mesocosm respirometer”. Mean mass-specific RMR was 460 mg kg⁻¹ h⁻¹ (± 34.9) at a mean water temperature of 19°C. When total RMR is added to published values of other tuna species at equivalent swimming speeds, there is a strong allometeric relationship with body mass (654 • Mb ⁰·⁹ ⁵, R ² = 0.97). This demonstrates that interspecific RMR of tuna scale with respect to body mass similar to that of other teleosts, but is approximately 5-fold higher than the standard metabolic rate (SMR) of other active teleost species. 2. This study reports on the first measurements of the metabolic cost of food digestion and assimilation (specific dynamic action, SDA) of a tuna species. Oxygen consumption (MO₂) and swimming velocity of southern bluefin tuna (SBT) (Thunnus maccoyii) were elevated for periods between 20-45 h (longest for the largest rations) post-ingestion of sardines (Sardinops sagax). It is suggested that the purpose of increased swimming velocity was to increase ventilation volume as a response to the enhanced metabolic demand associated with SDA. The magnitude of SDA as a proportion of gross energy ingested (SDA coefficient) averaged 35 ± 2.2 %. This demonstrates that the absolute energetic cost of SDA in SBT is approximately double that recorded in other teleost species. 3. This study examines the effects of sardines (Sardinops sagax) with high- (12.9%) or low- (1.8-4.0%) lipid level on specific dynamic action (SDA) and swimming velocity of southern bluefin tuna (SBT) (Thunnus maccoyii). Fish swam faster during the SDA period with the increase in velocity being greatest for the fish that ingested the high-lipid sardine. Magnitude of SDA was also greater for fish that ingested the high-lipid sardines. However, the energetic cost of SDA as a proportion of ingested energy was not significantly different between fish that ingested the high- (34.3 ± 2.4%) and low-lipid sardines (31.5 ± 2.9%). These results confirm that the high energetic cost of SDA is ecologically relevant. 4. In this study the metabolic and behavioural responses of both fasted and postprandial southern bluefin tuna (Thunnus maccoyii, SBT) to low dissolved oxygen (DO) was examined. In moderate hypoxia (4.44 and 3.23 mg l⁻¹), swimming velocity (U) and routine metabolic rate (RMR) of fasted fish was mildly enhanced. At 2.49 mg l⁻¹, U increase to over double in the normoxic speed, possibly as an escape response. At 1.57 mg l⁻¹, both U and RMR were suppressed and SBT failed to survive the entire 20 h exposure period. This reveals that SBT are remarkably well adapted to low DO. Feeding did not greatly influence their hypoxia tolerance. In a subsequent experiment there were no significant differences in U, RMR and gastric evacuation rates of postprandial SBT in hypoxia (2.84 mg l⁻¹) compared to those in normoxia (7.55 mg l-¹). 5. In this study, 768 h of simultaneous recordings of metabolic rate (MR, = heat production) and visceral temperature were made in both fasted and postprandial southern bluefin tuna (SBT, Thunnus maccoyii) of two sizes (~10 and 20 kg) and at two water temperatures (~19 and 16°C). Duration and magnitude of specific dynamic action (SDA) were strongly related to duration and magnitude of postprandial visceral warming providing the first empirical evidence of a link between SDA and postprandial visceral warming. Visceral temperature of fasted SBT was also directly related to MR. In this case, source of heat is thought to be metabolic work performed within the red muscles which warmed the viscera through thermal conductance. Visceral excess temperatures were over 1°C warmer in larger than smaller SBT. Better heat retention ability of the larger SBT is likely attributed to improved retia mirabilia development and greater thermal inertia. SBT at 16°C maintained visceral excess temperatures significantly warmer than similarly sized fish at 19°C. This demonstrates some ability of SBT to physiologically regulate visceral warming. 6. In this study, the effect of progressively severe hypoxia levels on the swimming performance and metabolic scope of juvenile mulloway (Argyrosomus japonicus) were investigated. In normoxic conditions (6.85 mg l⁻¹), standard metabolic rate (SMR) and cost of transport were typical for subcarangiform fish species. Mulloway had a moderate scope for aerobic metabolism (5 times the SMR). The critical dissolved oxygen level was 1.80 mg l⁻¹ revealing that mulloway are well adapted to hypoxia. In all levels of hypoxia (5.23, 3.64, and 1.86 mg l⁻¹) the active metabolic rate was reduced however, the critical swimming velocity was reduced only at 3.64, and 1.86 mg l⁻¹. Mulloway metabolic scope was significantly reduced at all hypoxia levels, suggesting that even mild hypoxia may reduce growth productivity. / Thesis (Ph.D.) -- University of Adelaide, School of Earth and Environmental Sciences, 2007

Tunas are the ocean highly migratory species, Taiwan is the top countries of the tropical tunas fishery in the Indian Ocean, and the tropical tunas are the main target species of our country in Indian Ocean. There were no systematic arrangement of large-scale tuna longline fishery in the past. While assessing the resource assessment, there are only few information included and discussed .The Purpose of this research based on the large-scale fishing vessels¡¦ logbooks, and analyzed the catch, CPUE and fishing effort of tropical tuna longline vessels with geographical information system. Discuss the dynamic patterns of tropical tuna vessels, and try to research the factors influencing the vessels activities. The research focus on the whole Indian Ocean, and utilizes the geographical information system to analyze and research CPUE from 1970 to 2007(38 years) with annual tropical tuna catch. Then, select the steady times of the fishery activities from 1999 to 2003 and carry on the analysis of catch data. Second, choose the first 20 fishing vessels of annual Yellow-fin tunas and Big-eye tunas with largest catch in this period, regard these as the representative researching vessels. According to the navigation route of each vessel, the results of the analysis are derived: 4 patterns of Yellow-fin tuna, 3 patterns of Big-eye tuna. On the whole, there are 5 routes of Taiwan fishing boat of tuna longline fishing vessels in the Indian Ocean: 1. The fishing vessels go back to the equator across Arabian Sea from the equator. 2. The fishing vessels go back to the equator across southern Indian Ocean from Arabian Sea. 3. The fishing vessels go back to the equator across the Bay of Bengal from the equator. 4. The fishing vessels go back to the equator across the southern Indian Ocean from the equator and stay near the equator during the whole year. Finally, conclude that tuna longline fishery of Taiwan target tropical tunas in the Indian Ocean are dominated by factors such as international fish price, climate, walrus and the relationship with fishery cooperative countries, etc.. These factors lead to the 5 kinds of vessel dynamic ways in the Indian Ocean.

Ninty three yellowfin tuna, Thunnus albacares, the fork length ranged from 80 to 168 cm were collected from the waters around Seychelles by two longline fishing vessels from April to December in 2006. The muscle and liver samples were analyzed for total mercury (THg) and organic mercury (OHg) concentrations.The concentrations of THg and OHg of the muscle were similar to previous studies. The concentrations of THg and OHg form the muscles and livers were positive-linearly regressed with the fish of Fork Length larger than 113 cm (big fish group), but only THg concentration of muscle was negative- linearly regressed 80- 112 cm (small fish group). Such patterns were first found in yellowfin tuna. It might be related to the ¡§growth rate¡¨ . Only one THg concentration of liver were over the standard set by the European Commission Decision (1 mg / kg THg wet wt.), other samples were in accordance with standard set by the European Commission Decision and the US-FDA food safty standard (1 mg / kg MeHg wet wt.). According to the dietary recommendations set by the Department of Health, Executive Yuan, yellowfin tuna can replace 86% animal protein source per week of people.