Doctor of Philosophy / Department of Agronomy / Walter H. Fick / Sericea lespedeza [Lespedeza cuneata (Dumont) G. Don] is a rangeland weed of the tallgrass prairie of Kansas. Experiments were carried out during the 2001-2003 growing seasons (June-November) to examine the relationship between sericea lespedeza and other rangeland species, wildlife use and dispersal of sericea lespedeza propagules, and the relationship between sericea lespedeza stubble height and utilization by livestock. Sericea lespedeza cover was positively correlated with violet lespedeza (r=0.25) [Lespedeza violacea (L.) Pers.], heath aster (Aster ericoides L.) (r=0.23) and total forb cover (r=0.56). Sericea lespedeza composition was negatively correlated with big bluestem (Andropogon gerardii Vitman.) (r=-0.27) and sideoats grama [Bouteloua curtipendula (Michx. Torr.)] (r=-0.27) composition and positively correlated with western ragweed (Ambrosia psilostachya D.C.) (r=0.21) and violet lespedeza (r=0.36) composition. Sericea lespedeza density was inversely related to forb species richness on all sites. On half the sites, there was also an inverse relationship between grass species richness and sericea lespedeza density. Grazed sites had less difference in grass species richness between high and low levels of sericea lespedeza densities. There was no evidence of an ecological threshold to the detriment of species richness with increasing sericea lespedeza density. Cattle digestive processes did not affect sericea lespedeza germination. Quail digestive processes enhanced germination of the few seeds that were excreted. Quail diet selection was investigated with a field study. Five out of 49 crops collected contained seed classified as sericea lespedeza. None of these seeds germinated in the greenhouse. Both cattle and quail could potentially disperse sericea lespedeza seed, but voluntary consumption appears to be low for both species, at least during November when other food is available. An height-weight table estimating percent utilization for various grazed and ungrazed heights of sericea lespedeza was constructed. Coefficient of determination values were greater than 0.85 between plant height and weight, indicating that the heightweight method was appropriate for estimating sericea lespedeza utilization. Using additional regression analysis, a chart for estimating forage from percent of plants grazed was constructed.

Doctor of Philosophy / Department of Agronomy / Gina Brown-Guedira / Allan K. Fritz / Aegilops tauschii, the D-genome donor of modern wheat, has served as an important source of genetic variation in wheat breeding. The objective of this research was to characterize and utilize multiple Ae. tauschii-derived pest resistance genes contained in the germplasm KS96WGRC40. Two Ae. tauschii-derived genes, H23 and Cmc4, provide resistance to the Hessian fly (HF) and wheat curl mite (WCM), respectively. A linkage analysis of a testcross population estimated 32.67% recombination between H23 and Cmc4 on chromosome 6DS in wheat indicating that the two genes are not tightly linked as previous mapping reports show. Haplotype data of recombinant lines and physical mapping of linked microsatellite markers located Cmc4 distal to H23. Haplotype data indicated that both KS89WGRC04 and KS96WGRC40 have the distal portion of 6DS derived from Ae. tauschii. Microsatellite primer pairs BARC183 and GDM036 were more useful than the previously published linked markers in identifying lines carrying Cmc4 and H23, respectively. Through phenotypic selection and advancement within the testcross population, three TC1F2:4 lines were identified as homozygous resistant for H23 and Cmc4 and have the complete terminal segment of 6DS from Ae. tauschii. Two lines are more desirable than the original germplasm releases and can serve as a source of resistance to both HF and WCM in an elite background. A linkage analysis of a segregating recombinant inbred line population identified an Ae. tauschii-derived gene of major effect conferring resistance to Septoria leaf blotch (STB) and another Ae. tauschii-derived gene of major effect conferring resistance to soil-borne wheat mosaic virus (SBWMV) in the germplasm KS96WGRC40. The STB resistance gene in KS96WGRC40 is located in the distal 40% of the short arm of chromosome 7D flanked by microsatellite markers Xgwm044 and Xbarc126. Two previously reported STB genes, Stb4 and Stb5, have been mapped to 7DS in the same region as the STB resistance gene in KS96WGRC40. The uniqueness of the STB resistance genes on 7DS is questionable. The SBWMV resistance gene in KS96WGRC40 is located on chromosome 5DL linked to microsatellite marker Xcfd010. The SBWMV resistance gene within KS96WGRC40 was derived from TA2397 via KS95WGRC33.

Doctor of Philosophy / Department of Agronomy / Stephen J. Thien / Range and Training Land Assessment (RTLA) and Land Rehabilitation and Maintenance (LRAM) are key components of The United States Army's Integrated Training Area Management (ITAM) Program, which outlines its commitment to support the sustainable use of military training lands. The primary purpose of the RTLA Program is to provide information and recommendations regarding the condition of training lands to range managers for scheduling of training areas and monitoring the effectiveness of rehabilitation projects. The goal of the LRAM component of ITAM is to reduce the long-term impacts of training on installations through the implementation of improvements to vegetation cover and repairs to landscape damage in disturbed areas. Fort Riley Military Installation, located in the largest remaining expanse of tallgrass prairie in the Flint Hills of northeastern Kansas, is a major training reservation, with seventy percent of its 40,434 ha used for mechanized maneuvers. A randomized complete block design composed of M1A1 tank traffic in a figure-eight pattern during wet and dry soil conditions was established in each of two soil types, a silty clay loam and a silt loam, and recovery of physical, chemical, and biological indicator variables was monitored from 2005 through 2007. In a second study, the effectiveness of LRAM procedures, including leveling, mulching, and reseeding, was evaluated following wheeled vehicle disturbance. The goals of this study were to identify disturbance indicators appropriate for assessing soil quality and, based on the status of these indicators, develop a method for modeling the stage and rate of ecological degradation and potential response to remediation. Disturbance increased significantly during wet compared to dry soil conditions, for increased traffic intensity, and for curve compared to straight-a-way areas in both soil types. The greatest impacts were on above and below ground community structure, providing an effective bioindicator of ecosystem health for military training land managers. Remediation of wheeled vehicle disturbance with leveling and mulching, but not reseeding, increased total vegetation production. The tallgrass prairie typically is considered to be among the most resilient of military training lands, but resiliency is dependent upon soil type and training conditions, and may require longer periods of recovery than previously thought.

Master of Agribusiness / Department of Agricultural Economics / Arlo Biere / The investors I am representing would like to know if they can be successful in the seed industry. They have certain skills and abilities along with industry experience that provides them with certain advantages that would allow them to succeed in the industry. The thesis or study will provide them with a detailed study of the possibilities and the challenges that are before them. To gain insight into positioning a firm in the industry, one must find a tool to help us to discover the answers to the question. I will use "Strategic Visioning in Cascade", this model outlines area of interest such as; a strategic overview, a value proposition, a market analysis, a functional analysis, financial projection and exit strategy in its total. The focus of the study will provide insight into the value proposition and market analysis. The value proposition will follow Michael Porter's Competitive Strategy analogy of cost leadership, differentiation and focus strategies. The market analysis will follow Thompson and Strickland's seven questions that lead to understanding of the selected industry.

Master of Science / Department of Agronomy / Jay M. Ham / The potential environmental impact of animal feeding operations on air quality has created the need for accurate air emissions measurements. Of particular concern are ammonia emissions from cattle feedlots, operations that contribute a large portion of the agricultural ammonia emissions inventory. Micrometeorological methods are ideal for emissions measurements from large, open-source areas like feedlot pens; however, theoretical assumptions about the boundary layer must be made, which may not hold true above the heterogeneous, fetch-limited surface of the feedlot. Thus, the first objective of this work was to characterize the surface boundary layer of an open-air cattle feedlot and provide insight into how micrometeorological techniques might be applied to these non-ideal sites. Eddy covariance was used to measure fluxes of momentum, heat, water, and carbon dioxide from a commercial cattle feedlot in central Kansas. Data supported the use of eddy covariance and similar methods (i.e., relaxed eddy accumulation) for flux measurements from both cattle and pen surfaces. The modeled cumulative source area contributing to eddy covariance measurements at a 6 m sample height was dominated by just a few pens near the tower, making the characteristics of those pens especially important when interpreting results. The second objective was to develop a system for measuring ammonia fluxes from feedlots. A new type of relaxed eddy accumulation system was designed, fabricated, and tested that used honeycomb denuders to independently sample ammonia in up-moving and down-moving eddies. Field testing of the relaxed eddy accumulation system at a feedlot near Manhattan, KS showed fluxes of ammonia ranged between 60 and 130 μg m-2 s-1 during the summer of 2007. Even in the high ammonia environment (e.g., 300-600 μg m-3), the honeycomb denuders had enough capacity for the 4-hour sampling duration and could be used to measure other chemical species that the denuders could be configured to capture. Results provide a foundation for emissions measurements of ammonia and other gases at cattle feedlots and help address some of the challenges that micrometeorologists face with any non-ideal source area.

Alors que les producteurs d'œufs canadiens font la transition des cages conventionnelles vers les systèmes de logement alternatifs, il est important de déterminer l’impact de ceux-ci sur le bien-être et les performances des poules pondeuses. L’objectif de cette étude était d’évaluer la prévalence de déviation du bréchet, de fracture du bréchet, de dermatite du coussinet plantaire et l’état du plumage dans les fermes commerciales du Québec, Canada. Le taux de ponte, la mortalité cumulée, la consommation alimentaire, l’épaisseur de la coquille, le poids de l’œuf, la force de la coquille, l’unité Haugh et la prévalence d’œufs sales et craqués ont été utilisés pour déterminer la performance du troupeau. L’utilisation de la thermographie infrarouge comme outil diagnostique pour les fractures du bréchet et les dermatites du coussinet plantaire a également été évaluée. Les données révèlent que les poules maintenues en volières présentent une prévalence de fracture du bréchet (P=0,011) et une mortalité (P=0,0049) plus élevée, en plus de produire des œufs avec une épaisseur de coquille supérieure comparativement aux poules maintenues en cages enrichies (P=0,0049). Une faible consommation alimentaire était corrélée avec une prévalence élevée de poules présentant une perte de plumes (P < 0,05) et une consommation alimentaire élevée était corrélée avec un poids d’œufs élevé (P < 0,05). Les systèmes de logement n’ont pas influencé les autres paramètres étudiés. Globalement, les volières impactent négativement les fractures du bréchet, les dermatites du coussinet plantaire ainsi que la mortalité et la thermographie infrarouge n’est pas un outil diagnostique fiable. / As Canadian egg farmers transition their flocks from conventional cages to alternative housing systems, it is important to evaluate the impact of the latter on the performance and welfare of laying hens. To this end, the present study investigates the prevalence of keel bone deviation, keel bone fracture, footpad dermatitis and feather coverage in commercial flocks in Quebec, Canada, housed in enriched cages and aviaries. Mean egg production, cumulative mortality, feed intake, shell thickness, egg weight, shell strength, Haugh unit, and the prevalence of cracked or dirty eggs were used as measures of flock performance. The present study also investigates the use of infrared thermography as a diagnostic tool for keel bone fractures and footpad dermatitis in hens. Our data show that hens housed in aviaries have a significantly higher prevalence of keel bone fracture (P=0.011) and cumulative mortality (P=0.0049) but that the egg shells of aviary hens are significantly thicker than their counterparts in enriched cages (P=0.0049). While thermal imaging could not distinguish between hens with and those without fractures, footpad temperatures were significantly higher in hens with severe dermatitis (P<0.01). Furthermore, a low feed intake positively correlated with damaged feather coverage (P<0.05), while high feed intake correlated with high egg weight (P<0.05). The other parameters studied were not influenced by the type of housing. Overall, aviary housing negatively impacted keel bone fractures, footpad dermatitis and mortality and infrared thermography is not a valid diagnostic tool for keel fracture and footpad dermatitis in hens.

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Doctor of Philosophy / Agronomy / Allan K. Fritz / Bikram S. Gill / Gary M. Paulsen / Post-anthesis high temperature stress in wheat (Triticum aestivum L.) is a major cause of yield reduction. This process results in the loss of viable leaf area and a decrease in green leaf duration ultimately causing a yield loss. The objectives of this study were to (i) phenotype a recombinant inbred line population for heat tolerance traits, (ii) understand the genetic basis of heat tolerance by mapping quantitative trait loci (QTL) linked to yield-related traits under high temperature, (iii) model stay-green under high temperature stress and map the QTL linked to stay-green parameters, and (iv) validate the markers linked to QTL under field conditions. A filial6:7 (F6:7) recombinant inbred line (RIL) population was developed by crossing Ventnor, a heat-tolerant white winter wheat with Karl 92, a relatively heat susceptible hard red winter wheat. From 10 DAA to maturity, the treatments of optimum temperature or high temperature stress (30/25°C) were imposed on the RILs. The traits measured included grain filling duration (GFD), kernels per spike, thousand kernel weight (TKW), and grain filling rate (GFR). The stay-green traits calculated were: i) time between 75% and 25% green, ii) maximum rate of senescence, iii) time to maximum rate of senescence, and v) percent green at maximum senescence. Genetic characterization was performed using microsatellite (SSR), amplified fragment length polymorphism (AFLP) and a sequence tag site (STS) markers. GFD was positively correlated with TKW and negatively with GFR and maximum rate of senescence. Principle component analysis (PCA) showed kernels per spike, maximum rate of senescence, and TKW accounted for 98% of total variability among the genotypes for heat tolerance. The most significant QTL for yield traits co-localized with marker Xgwm296 for TKW, Xgwm356 for kernels per spike, and Xksum61 for GFR. The QTL for stay-green traits co-localized with markers P41/M62-107 on Chromosome 2A, Xbarc136 on Chromosome 2D, P58/MC84-146 on Chromosome 3B, P58/M77-343 on Chromosome 6A, and. P58/MC84-406 on Chromosome 6B. These results indicate that increased green leaf area duration has a positive effect on the grain yield under high temperature. Once the kernels per spike are established, GFD and TKW can be used as selection criteria for post-anthesis heat-tolerance.