Derivados do politiofeno são promissores para obtenção de sensores ópticos devido as suas propriedades crômicas, enquanto que polímeros azosubstituídos (azopolímeros) têm sido estudados para várias aplicações, tal como memórias ópticas. Neste trabalho procurou-se unir as propriedades dos derivados politiofênicos as dos azopolímeros através da preparação de um polímero tiofênico azosubstituído, obtido pela funcionalização do monômero tiofênico com um grupo azobenzênico. Para fins de comparação, foram também sintetizados um derivado polialquiltiofeno, o poli(3-octiltiofeno), e um copolímero formado a partir da união dos monômeros 3- octiltiofeno e do tiofeno azosubstituído. A obtenção do monômero azosubstituído foi feita a partir de uma reação de esterificação entre o ácido 3-tiofeno acético e o corante comercial vermelho disperso 1 (disperse red 1, DR1), ao passo que o monômero alquilado foi adquirido comercialmente. Os polímeros foram sintetizados por polimerização oxidativa com cloreto fénico e caracterizados químicoestruturalmente pelas técnicas de FTIR, 1H RMN, análise elementar, HPSEC e análise térmica (TG e DSC). Dessas análises comprovou-se a formação dos homopolímeros, mas não foi possível confirmar a formação do copolímero e ainda para esse caso, obteve-se uma menor quantidade de unidades azosubstituídas do que a pretendida. A análise da fotoluminescência destes materiais mostrou a influência do tipo de cadeia lateral na intensidade e no formato do espectro de emissão desses polímeros. A espectroscopia de UV-Vis foi utilizada para o estudo de suas propriedades crômicas, sendo observada a presença de termo- e solvatocromismo. O termocromismo foi analisado em solução e na forma de filmes e o solvatocromismo em soluções de solventes puros e em misturas de THF/ n-hexano com diferentes proporções. Esses polímeros também apresentaram alterações em seus espectros de absorção como resposta à variação do pH da solução. A birrefringência fotoinduzida, técnica de estudo visando a aplicação dos polímeros em memórias ópticas, somente foi observada para o homopolímero azosubstituído. Os resultados obtidos neste trabalho indicam que o politiofeno azosubstituído é um candidato promissor para elemento ativo em uma série de aplicações, tais como sensores de diversos tipos e em dispositivos de marcação oculta / Polythiophene derivatives are promising for optical sensors due to their chromic properties while azofunctionalized polymers have been used in several applications such as optical memories. In this work, an azosubstituted polythiophene was prepared by the functionalization of the thiophenic monomer with an azobenzene moiety in order to combine the polythiophene properties with those from the azopolymers. For the sake of comparison, a polyalkylthiophene, the poly(3- octylthiophene), and a copolymer of 3-octylthiophene and the azothiophene were synthesized. The azosubstituted monomer was synthesized by the esterification reaction of 3-thiopheneacetic acid and the commercial dye Disperse Red 1 (DRI), whilc the alkyl thiophene monomer was purchased. The polymers were prepared by oxidative polymerization reactions with ferric chloride and characterized chemically and structurally using FTIR, 1H NMR, elemental analysis and thermal analysis (TG and DSC) techniques. From these analyses, the formation of homopolymers was confirmed, but it was not possible to confirm the formation of the copolymer. In the latter, the amount of azosubstituted units was smaller than expected. The analysis of the polymers photoluminescence showed the influence of the side chain in the intensity and shape of the emission spectra. UV-Vis spectroscopy was used to study the polymer chromic properties which showed thermo- and solvatochromism. Thermochromism was analyzed in solution and in thin solid films and the solvatochromism was studied in pure solvent solutions and mixtures of THF/hexane in different ratios. These polymers also had their absorption spectra affected by changing the concentration of a protonic acid (HCI) solution. Photoinduced birefringence, aiming at optical memories applications, was only observed for the azosubstituted homopolymer. The overall results indicate that the azosubstituted polythiophene is promising as active material for several applications, such as different types of sensors and security-labeling devices

Phenotypic screening of drug molecules relies on the generation of a specific response; however the means by which this is elicited often remains unknown. Affinity chromatography is a valuable tool in the discovery of drug binding partners and may even allow the elucidation of the wider interactome of the initial drug target. The introduction of easily cleavable linkers and affinity-independent elution protocols to affinity chromatography is of current interest, since they render the technique much more adaptable with respect to the characterisation of biologically active species of interest. This thesis details the application of a novel azobenzene linker developed by the Hulme group for use in affinity-independent chromatography. The first chapter reviews recent developments in affinity chromatography and describes the synthesis of an affinity linker toolbox with both affinity-dependent and affinity-independent linkers. These linkers are functionalised with an azide moiety for use in CuAAC coupling to alkynyl derivatives of bioactive small molecules and have been modified to include photoreactive groups giving a series of linkers for use in the identification of less abundant, or low affinity, proteins. The first drug investigated, anisomycin (ANS), is a small molecule which was initially introduced as an antibiotic drug (Flagecidin). At nanomolar concentrations ANS has been shown to affect the mitogen activated protein kinase (MAPK) pathways; downstream effects of these pathways are thought to play a role in a range of pathological disorders such as Alzheimer’s disease, cancer and spinal muscular atrophy (SMA). ANS is thus a candidate for drug repurposing. Although the downstream effects of MAPK/SAPK pathway activation induced by anisomycin are well-documented, the cellular target has yet to be revealed. Previous work by the Hulme group has shown that the N-propargyl anisomycin derivative (I) retains the biological activity of the lead compound ANS. Thus to evaluate the cellular protein targets, N-propargyl ANS (I) was coupled onto the linker toolbox to create an ANS affinity probe library as described in chapter 2. The second drug investigated, fingolimod, was introduced as an immunomodulating drug (Glienya) for the treatment of multiple sclerosis (MS). This small molecule has also been shown to have anti-cancer properties in a range of cancer cell lines; however the precise mechanism by which this is effected is unknown. Literature precedent shows that terminal modification of fingolimod generates analogues which still retain biological activity. Thus a novel fingolimod alkyne derivative (II) was synthesised and used to create an affinity probe library as described in chapter 3. Chapter 4 describes affinity pull-down experiments conducted with the aim of finding the protein target(s) of ANS and fingolimod, using the affinity probe libraries generated in chapters 2 and 3. This chapter concludes with a discussion of the implications of these findings and directions for future study.

Blue phases have been known to exist in chiral liquid crystals between the cholesteric and isotropic phases. A blue phase as a self-assembled three-dimensional cubic structure with lattice periods of several hundred nanometers exhibits not only selective Bragg reflections of light in the visible wavelength but optically isotropy owning to its highly symmetric molecular structure. Locally, blue phases still exhibit local anisotropic physical properties because of anisotropic structure of the nematic liquid crystal molecules, which make it possible to be easily controlled by an external field. This dissertation studies the effects in blue phases under various external fields, including electrical field, optical field, and temperature. Firstly, we investigated the bistable effect under the influence of an electric field and transition mechanism between various lattice orientations in the negative liquid crystal blue phase. The blue phase exists over a wide temperature range ~16oC, and three lattices (110), (112) and (200) of BPI are confirmed with Kossel diagrams. The red platelet (110) lattice and blue platelet (200) lattice can be stabilized and switched to each other by particular pulse voltages. We also studied the behavior that an electric field induced planar state and electro-hydrodynamatic effect in the blue phase. Additionally, the reflected color of the (200) lattice can be adjusted from 455nm to 545 nm by temperature induced lattice distortions and provided with reversibility. Secondly, we presented an optically switchable band gap of a 3D photonic crystal that is based on an azobenzene-doped liquid crystal blue phase. Two kinds of azobenzene, M12C and 4MAB, were utilized to switch photonic band gap of blue phases and to change the phase transition temperature of blue phase, respectively. For M12C- doped liquid crystal blue phase, the trans-cis photoisomerization of M12C induced by irradiation using 473nm light caused the deformation of the cubic unit cell of the blue phase and a shift in the photonic band gap. The fast back-isomerization of azobenzene was induced by irradiation with 532nm light. The crystalline structure was verified using a Kossel diffraction diagram. Moreover, we also demonstrated an optically addressable blue phase display, based on Bragg reflection from the photonic band gap. For 4MAB- doped liquid crystal blue phase, the trans-cis photoisomerization of 4MAB destabilizes cubic unit cell of the blue phase and reduces the phase transition temperature. We observed the phase sequences of the 4MAB-doped blue phase as a function of the time of UV irradiation. Various distinct phases can be switched to another specific phase by controlling irradiated time and temperature of the sample. Therefore, the corresponding bandgap can be switched on and off between blue phase and isotropic phase, or varied from 3D to 1D between blue phase and cholesteric phase. Finally, we investigated the thermal hysteresis in the phase transition between the cholesteric liquid crystal and the blue phase of liquid crystal. The thermal hysteresis of such a chiral doped nematic liquid crystal occurs over 6oC. Both the CLC phase and the blue phase can stably exist at room temperature and be switched to each other using temperature-controlled processes. Further, we demonstrated two sets of bistable conditions using various surface treatments. In a homogeneous aligned sample, two stable states, CLC with a planar alignment and blue phase with a uniform lattice distribution, reflect light of wavelengths 480-510nm and 630nm, respectively, as determined by the corresponding Bragg¡¦s reflection conditions. In the untreated sample, the CLC phase with a focal conic texture can scatter light and the blue phase with a non-uniform lattice distribution provides high isotropic optical transparency.

We report on the surface properties of a photoresponsive surfactant that incorporates the light-sensitive azobenzene group into its tail. Cis-trans photo-isomerization of this group alters the ability of the surfactant to pack into adsorbed monolayers at an air-water interface or into aggregates in solution, causing a significant variation in bulk and surface properties upon changes in the illumination conditions. NMR studies indicate that a solution left in the dark for an extended period of time contains trans isomer almost exclusively, while samples exposed to light of fixed wavelength eventually reach a photostationary equilibrium with significant amounts of both isomers present. Dynamic surface tension studies performed on this system under different illumination conditions (dark, UV light, visible light) show profoundly different approaches to equilibrium. At concentrations well above the CMC, the same equilibrium tension is reached in all three cases, presumably corresponding to a surface saturated with the trans (more surface active) isomer. The dark sample shows a simple, single-step relaxation in surface tension after creation of a fresh interface, while the UV and visible samples exhibit a more rapid initial decrease in tension, followed by a plateau of nearly constant tension, and end with a final relaxation to equilibrium. It is hypothesized that this behavior of the UV and visible samples is caused by competitive adsorption between the cis and trans isomers present in these mixtures. Presumably the cis surfactant reaches the interface more quickly, leading to a cis-dominated interface having a tension value corresponding to the intermediate plateau, but is ultimately displaced by the trans isomer. Diffusional time scale arguments which consider the extremes of possible micellar dissolution rates are used to analyze the relaxation data of the dark sample, and the results indicate that micellar dissolution in these samples is slow. / Singapore-MIT Alliance (SMA)

Novel self-assembling copolymers of 4-Methacryloyloxyazobenzene and NN-dimethylacrylamide (MOAB-DMA) exhibiting a pronounced photoviscosity effects in water are described. An optimum polymer architecture corresponding to maximum contents of the azobenzene moieties that allowed for the aqueous solubility of the MOAB-DMA copolymer at ambient temperature was observed at a molar fraction of the MOAB moieties in the copolymer of 0.2. When blended with Pluronic F127 copolymers, the MOAB-DMA solutions become both irradiation- and temperature-sensitive and capable of sol-gel transitions depending on the MOAB-DMA content. Effect of the MOAB-DMA copolymer addition to concentrated Pluronic F127 solutions was studied by controlled stress rheology. The presence of the amphiphilic MOAB-DMA copolymers in the micellar Pluronic solutions enabled irradiation-dependent shifts in gelation temperature, while the viscoelastic gel modulus was not significantly affected by the MOAB-DMA copolymers, indicating that cubic lattice of the Pluronic responsible for the gel formation was not compromised. The UV- and T-dependent gelling media might prove to become viable electrophoretic separation matrices. / Singapore-MIT Alliance (SMA)

Les récepteurs canaux P2X, sélectifs des cations, sont activés par l'ATP extracellulaire. Les récepteurs P2X remplissent de nombreux rôles physiologiques allant de la nociception à la neuromodulation. L'étude du rôle physiopathologique de ces récepteurs souffre d'un manque d'outils pharmacologiques sélectifs. L'optogénétique pharmacologique serait une méthode pour palier ce manque. Mes travaux se divisent en deux parties, l'une concernant l'étude structurale des récepteurs P2X et l'autre présentant le développement d'outils optogénétiques chimiques pour contrôler l'activité des récepteurs P2X. Dans une première série d'expériences nous avons identifié le site de liaison de l'ATP par marquage d'affinité dirigé à l'aide d'un analogue de l'ATP thiol réactif. Ensuite,nous avons démontré le mécanisme d'activation des récepteurs P2X dans une étude utilisant la bioinformatique et l'ingénierie de site zinc. Ainsi nous avons établi une corrélation entre l'ouverture du canal et le rétrécissement du site de liaison suite à la fixation de l'ATP. Enfin nous avons mis au point une nouvelle stratégie optogénétique chimique appelée « optogating » permettant de reprogrammer un canal ionique afin de le contrôler par la lumière. Nous avons montré qu'un récepteur canal modifié au niveau transmembranaire, par un réactif contenant un azobenzène, peut être activé réversiblement par la lumière sans recourir au ligand endogène. Nous avons réussi à photocontrôler l'activité neuronale à l'aide d'un récepteur P2X activé par la lumière,dans lequel, la sensibilité à l'ATP a été génétiquement supprimée. Cet outil est prometteur pour l'étude du rôle physiologique des récepteurs P2X in vivo. / The ATP-gated P2X receptors are trimeric ion channels that are selective to cations.These ion channels are involved in various physiological processes such as nociception and neuromodulation. The study of P2XR physiology suffers from a lack of selective pharmacological molecules. Optogenetic pharmacology could solve this problem. ln thiswork, 1 performed structural studies of P2X receptors and developed an original optochemical tool in order to contrai P2X activity. First, we localized the ATP-binding sites by creating, through a proximity-dependent"tethering" reaction, covalent bonds between a synthesized ATP-derived thiol-reactiveP2X2 agonist (NCS-ATP) and single cysteine mutants engineered in the putativebinding cavities of the P2X2 receptor. Next, we demonstrated that tightening of the ATP-binding sites correlates precisely with channel opening in the P2X2 receptor. Finally, we developed a unique and versatile method, in which the gating machinery of the P2X2 receptor was reprogrammed to respond to light. We found that channels covalently modified by azobenzene-containing reagents at the transmembrane segments could be reversibly turned on and off by light, without the need of the natural ligand (here ATP). We demonstrated photocontrol of neuronal activity by a light-gatedP2X receptor, in which the natural sensitivity to ATP was genetically removed. These light-gated P2X receptors represent valuable tools for investigating the physiological functions of P2X receptors.

Derivados do politiofeno são promissores para obtenção de sensores ópticos devido as suas propriedades crômicas, enquanto que polímeros azosubstituídos (azopolímeros) têm sido estudados para várias aplicações, tal como memórias ópticas. Neste trabalho procurou-se unir as propriedades dos derivados politiofênicos as dos azopolímeros através da preparação de um polímero tiofênico azosubstituído, obtido pela funcionalização do monômero tiofênico com um grupo azobenzênico. Para fins de comparação, foram também sintetizados um derivado polialquiltiofeno, o poli(3-octiltiofeno), e um copolímero formado a partir da união dos monômeros 3- octiltiofeno e do tiofeno azosubstituído. A obtenção do monômero azosubstituído foi feita a partir de uma reação de esterificação entre o ácido 3-tiofeno acético e o corante comercial vermelho disperso 1 (disperse red 1, DR1), ao passo que o monômero alquilado foi adquirido comercialmente. Os polímeros foram sintetizados por polimerização oxidativa com cloreto fénico e caracterizados químicoestruturalmente pelas técnicas de FTIR, 1H RMN, análise elementar, HPSEC e análise térmica (TG e DSC). Dessas análises comprovou-se a formação dos homopolímeros, mas não foi possível confirmar a formação do copolímero e ainda para esse caso, obteve-se uma menor quantidade de unidades azosubstituídas do que a pretendida. A análise da fotoluminescência destes materiais mostrou a influência do tipo de cadeia lateral na intensidade e no formato do espectro de emissão desses polímeros. A espectroscopia de UV-Vis foi utilizada para o estudo de suas propriedades crômicas, sendo observada a presença de termo- e solvatocromismo. O termocromismo foi analisado em solução e na forma de filmes e o solvatocromismo em soluções de solventes puros e em misturas de THF/ n-hexano com diferentes proporções. Esses polímeros também apresentaram alterações em seus espectros de absorção como resposta à variação do pH da solução. A birrefringência fotoinduzida, técnica de estudo visando a aplicação dos polímeros em memórias ópticas, somente foi observada para o homopolímero azosubstituído. Os resultados obtidos neste trabalho indicam que o politiofeno azosubstituído é um candidato promissor para elemento ativo em uma série de aplicações, tais como sensores de diversos tipos e em dispositivos de marcação oculta / Polythiophene derivatives are promising for optical sensors due to their chromic properties while azofunctionalized polymers have been used in several applications such as optical memories. In this work, an azosubstituted polythiophene was prepared by the functionalization of the thiophenic monomer with an azobenzene moiety in order to combine the polythiophene properties with those from the azopolymers. For the sake of comparison, a polyalkylthiophene, the poly(3- octylthiophene), and a copolymer of 3-octylthiophene and the azothiophene were synthesized. The azosubstituted monomer was synthesized by the esterification reaction of 3-thiopheneacetic acid and the commercial dye Disperse Red 1 (DRI), whilc the alkyl thiophene monomer was purchased. The polymers were prepared by oxidative polymerization reactions with ferric chloride and characterized chemically and structurally using FTIR, 1H NMR, elemental analysis and thermal analysis (TG and DSC) techniques. From these analyses, the formation of homopolymers was confirmed, but it was not possible to confirm the formation of the copolymer. In the latter, the amount of azosubstituted units was smaller than expected. The analysis of the polymers photoluminescence showed the influence of the side chain in the intensity and shape of the emission spectra. UV-Vis spectroscopy was used to study the polymer chromic properties which showed thermo- and solvatochromism. Thermochromism was analyzed in solution and in thin solid films and the solvatochromism was studied in pure solvent solutions and mixtures of THF/hexane in different ratios. These polymers also had their absorption spectra affected by changing the concentration of a protonic acid (HCI) solution. Photoinduced birefringence, aiming at optical memories applications, was only observed for the azosubstituted homopolymer. The overall results indicate that the azosubstituted polythiophene is promising as active material for several applications, such as different types of sensors and security-labeling devices

京都大学 / 0048 / 新制・課程博士 / 博士(理学) / 甲第22822号 / 理博第4632号 / 新制||理||1666(附属図書館) / 京都大学大学院理学研究科物理学・宇宙物理学専攻 / (主査)教授 山本 潤, 教授 佐々 真一, 准教授 荒木 武昭 / 学位規則第4条第1項該当 / Doctor of Science / Kyoto University / DFAM

Grace à leur excellente propriété photochromique, les dérivés d’azobenzène trouvent de plus en plus d’applications pour le photocontrôle spatio-temporel de conformations moléculaires, de réactivités chimiques, des activités biologiques et pharmaceutiques. Dans ce contexte, introduire un motif photochromique dans les macrocycles contenant de glucides représente une approche excitante afin de moduler par la lumière les propriétés physicochimiques, chimiques et biologiques de cette unique classe de molécules qui attirent d’attention croissante en chimie médicinale et en science des matériaux.Deux séries de glycomacrocycles photocommutables ont été synthétisés dans cette thèse. La première est obtenue via une approche d’O-alkylation en one-pot, à partir 2,2’-dihydroxyazobenzène et di-O-bromoacétyl glycosides. Ces glycomacrocycles possèdent d’excellentes propriétés photochromiques, avec une haute résistance à la fatigue. Le transfert de chiralité de glucide à l’azobenzène a été observé. L’un des glycomacrocycles est capable de former d’organogels qui répond aux stimuli photo, thermique et mécanique. La seconde série de macrocycles est synthétisée via une glycosylation intramoléculaire, en utilisant dihydroxyazobenzène comme attache. Dans cette approche, l’efficacité et la stéréoselectivité de glycosylation sont étudiées en modulant la nature de liens et la configuration d’azobenzène. / As excellent photochromic molecules, azobenzene derivatives have increasing applications in the spatial and temporal photocontrol of molecular conformation, chemical reactivity, biological and pharmacological activities. In this context, an exciting attempt is introducing a photochromic motif into carbohydrate-containing macrocycles, a unique class of products with growing attention in medicinal and material science, so as to modulate their physicochemical, chemical and biologic properties by light.Two series of photoswitchable glycomacrocycles have been prepared in this thesis. The first one is obtained from 2,2’-dihydroxyazobenzene and di-O-bromoacetyl glycosides via one-pot O-alkylation approach. These macrocycles show excellent photophromic properties with high fatigue resistance. Chirality transfer from sugar to azobenzene moiety has been observed. One of the macrocycles can form organogel that responses to photo-, thermal- and mechanical stimulus. The second series of glycomacrocycles were prepared through intramolecular glycosylation by using dihydroxyazobenzene as tether. The efficiency and the stereoselective outcome of glycosylation have been investigated by modulating the nature of the linkers and the configuration of the azobenzene tether.

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