Global ETD Search

1	Computational Quantum Chemistry Studies of the Stabilities of Radical Intermediates Formed During the Oxidation of Melatonin Warden, Constance E 01 December 2016 (has links) Melatonin, a nontoxic natural antioxidant, is of interest as a possible spin trap for use in spectroscopic methods to observe and identify short-lived free radicals, which have been linked to oxidative stress that may result in serious health problems. However, the reaction mechanisms for the oxidation of melatonin to form the product N1-acetyl-N2-formyl-5-methoxykynuramine are still not well understood. Computational quantum chemistry studies have been done on four proposed reaction mechanisms, involving the following major intermediate structures: a dioxetane, an epoxide, a melatonin radical cation, and a spin radical adduct. Molecular geometries were optimized at the DFT/B3LYP/cc-pVTZ level of theory, and single point energies were extrapolated to the complete basis set limit at the Hartree-Fock and second-order Møller-Plesset perturbation levels of theory using the cc-pVXZ (X = D, T, Q) basis sets. The lowest energy pathway was found to be the single electron transfer pathway, involving the melatonin radical cation intermediate. Melatonin Free Radical Spin Trap Basis Set Extrapolation HF MP2 DFT Physical Chemistry
2	Computational Quantum Study of Intermediates Formed During the Partial Oxidation of Melatonin Oladiran, Oladun 01 May 2020 (has links) Melatonin is a neurohormone produced by the pineal gland in the brain. It functions as an antioxidant to scavenge free radicals. Free radicals are reactive species; they often oxidize the cells leading to oxidative stress which may lead to severe health complications. Reaction of melatonin with free radicals is known to be stepwise, as such the stability of the intermediates can be examined. Thus, the possibility of using melatonin as an in vivo spin trap can be determined. Spin traps allow characterization of unstable radical species using electron spin resonance spectroscopy. In this research, ab initio quantum chemistry techniques were used to calculate the energies of selected intermediates formed during the partial oxidation of melatonin by hydroxyl radical. Specifically, optimized geometries for melatonin, and selected intermediates with ·OH were obtained at the DFT/B3LYP/cc-pVXZ and HF/cc-pVXZ (X = D, T, Q) levels of theory. Extrapolations to the complete basis set limit were also performed. Melatonin Spin traps Free Radicals DFT HF Basis Set Extrapolation Chemistry Physical Chemistry
3	Spin Trapping Behavior of Some Selected Melatonin Derivatives for Hydroxyl Radicals: A Computational Study Caesar, Aaron 01 May 2023 (has links) (PDF) Melatonin (N-acetyl-5-methoxytryptamin, MLT) is a naturally occurring antioxidant which has shown some potential for use as a spin trap. Spin traps react with short lived hydroxyl radicals (HO·) to produce more stable products called spin adducts which may be characterized by electron paramagnetic resonance spectroscopy. However, the relative stability of hydroxyl spin adducts of melatonin derivatives (MLTD) compared to 2-hydroxymelatonin (HO-MLT) has not been examined computationally. Computational studies have been done on four selected MLTD; methylmelatonin (Me-MLT), chloromelatonin (Cl-MLT), cyanomelatonin (CN-MLT), and nitromelatonin (NO2-MLT). Geometry of the structures were optimized at the HF/6-31G(d), cc-pVXZ, (X=D and T) and DFT/B3LYP/6-31G(d), cc-pVDZ and cc-pVTZ levels of theory and extrapolated to the complete basis set limit using cc-pVXZ (X=D, T) basis sets. The lowest relative energy was found to be a mix of results for 2-OH-MLT-Me at HF and 2-OH-MLT-NO2 at DFT. Melatonin Melatonin Derivatives Spin Traps Free Radicals Hartree-Fock Density Functional Theory Basis Set Extrapolation Chemistry
4	Advanced electronic structure theory: from molecules to crystals / Höhere Elektronenstrukturtheorie: vom Molekül zum Kristall Buth, Christian 21 October 2005 (has links) (PDF) In dieser Dissertation werden ab initio Theorien zur Beschreibung der Zustände von perfekten halbleitenden und nichtleitenden Kristallen, unter Berücksichtigung elektronischer Korrelationen, abgeleitet und angewandt. Als Ausgangsbasis dient hierzu die Hartree-Fock Approximation in Verbindung mit Wannier-Orbitalen. Darauf aufbauend studiere ich zunächst in Teil I der Abhandlung den Grundzustand der wasserstoffbrückengebundenen Fluorwasserstoff und Chlorwasserstoff zick-zack Ketten und analysiere die langreichweitigen Korrelationsbeiträge. Dabei mache ich die Basissatzextrapolationstechniken, die für kleine Moleküle entwickelt wurden, zur Berechnung von hochgenauen Bindungsenergien von Kristallen nutzbar. In Teil II der Arbeit leite ich zunächst eine quantenfeldtheoretische ab initio Beschreibung von Elektroneneinfangzuständen und Lochzuständen in Kristallen her. Grundlage hierbei ist das etablierte algebraische diagrammatische Konstruktionsschema (ADC) zur Approximation der Selbstenergie für die Bestimmung der Vielteilchen-Green's-Funktion mittels der Dyson-Gleichung. Die volle Translationssymmetrie des Problems wird hierbei beachtet und die Lokalität elektronischer Korrelationen ausgenutzt. Das resultierende Schema wird Kristallorbital-ADC (CO-ADC) genannt. Ich berechne damit die Quasiteilchenbandstruktur einer Fluorwasserstoffkette und eines Lithiumfluoridkristalls. In beiden Fällen erhalte ich eine sehr gute Übereinstimmung zwischen meinen Resultaten und den Ergebnissen aus anderen Methoden. / In this dissertation, theories for the ab initio description of the states of perfect semiconducting and insulating crystals are derived and applied. Electron correlations are treated thoroughly based on the Hartree-Fock approximation formulated in terms of Wannier orbitals. In part I of the treatise, I study the ground state of hydrogen-bonded hydrogen fluoride and hydrogen chloride zig-zag chains. I analyse the long-range contributions of electron correlations. Thereby, I employ basis set extrapolation techniques, which have originally been developed for small molecules, to also obtain highly accurate binding energies of crystals. In part II of the thesis, I devise an ab initio description of the electron attachment and electron removal states of crystals using methods of quantum field theory. I harness the well-established algebraic diagrammatic construction scheme (ADC) to approximate the self-energy, used in conjunction with the Dyson equation, to determine the many-particle Green's function for crystals. Thereby, the translational symmetry of the problem and the locality of electron correlations are fully exploited. The resulting scheme is termed crystal orbital ADC (CO-ADC). It is applied to obtain the quasiparticle band structure of a hydrogen fluoride chain and a lithium fluoride crystal. In both cases, a very good agreement of my results to those determined with other methods is observed. Ab-initio-Rechnung Angeregte Zustände Bandstruktur Basissatz Extrapolation Basissatz Konvergenz Bindungsenergie Chlorwasserstoff Elektronenstrukturtheorie Elektronische Korrelation Fluorwasserstoff Greensfunktion Kristall Lithiumfluorid Propa Green's function ab initio calculations band structure basis set convergence basis set extrapolation binding energy crystal electron correlation electronic structure theory excited states hydrogen chloride hydrogen fluoride infinite bent chain ddc:530 rvk:UM 1200 Ab-initio-Rechnung Angeregter Zustand Bandstruktur Bindungsenergie Chlorwasserstoff Elektronenkorrelation Extrapolation Fluorwasserstoff Green-Funktion Konvergenz Kristall Lithiumfluorid Propagator Vielteilchentheorie
5	Advanced electronic structure theory: from molecules to crystals Buth, Christian 10 November 2005 (has links) In dieser Dissertation werden ab initio Theorien zur Beschreibung der Zustände von perfekten halbleitenden und nichtleitenden Kristallen, unter Berücksichtigung elektronischer Korrelationen, abgeleitet und angewandt. Als Ausgangsbasis dient hierzu die Hartree-Fock Approximation in Verbindung mit Wannier-Orbitalen. Darauf aufbauend studiere ich zunächst in Teil I der Abhandlung den Grundzustand der wasserstoffbrückengebundenen Fluorwasserstoff und Chlorwasserstoff zick-zack Ketten und analysiere die langreichweitigen Korrelationsbeiträge. Dabei mache ich die Basissatzextrapolationstechniken, die für kleine Moleküle entwickelt wurden, zur Berechnung von hochgenauen Bindungsenergien von Kristallen nutzbar. In Teil II der Arbeit leite ich zunächst eine quantenfeldtheoretische ab initio Beschreibung von Elektroneneinfangzuständen und Lochzuständen in Kristallen her. Grundlage hierbei ist das etablierte algebraische diagrammatische Konstruktionsschema (ADC) zur Approximation der Selbstenergie für die Bestimmung der Vielteilchen-Green's-Funktion mittels der Dyson-Gleichung. Die volle Translationssymmetrie des Problems wird hierbei beachtet und die Lokalität elektronischer Korrelationen ausgenutzt. Das resultierende Schema wird Kristallorbital-ADC (CO-ADC) genannt. Ich berechne damit die Quasiteilchenbandstruktur einer Fluorwasserstoffkette und eines Lithiumfluoridkristalls. In beiden Fällen erhalte ich eine sehr gute Übereinstimmung zwischen meinen Resultaten und den Ergebnissen aus anderen Methoden. / In this dissertation, theories for the ab initio description of the states of perfect semiconducting and insulating crystals are derived and applied. Electron correlations are treated thoroughly based on the Hartree-Fock approximation formulated in terms of Wannier orbitals. In part I of the treatise, I study the ground state of hydrogen-bonded hydrogen fluoride and hydrogen chloride zig-zag chains. I analyse the long-range contributions of electron correlations. Thereby, I employ basis set extrapolation techniques, which have originally been developed for small molecules, to also obtain highly accurate binding energies of crystals. In part II of the thesis, I devise an ab initio description of the electron attachment and electron removal states of crystals using methods of quantum field theory. I harness the well-established algebraic diagrammatic construction scheme (ADC) to approximate the self-energy, used in conjunction with the Dyson equation, to determine the many-particle Green's function for crystals. Thereby, the translational symmetry of the problem and the locality of electron correlations are fully exploited. The resulting scheme is termed crystal orbital ADC (CO-ADC). It is applied to obtain the quasiparticle band structure of a hydrogen fluoride chain and a lithium fluoride crystal. In both cases, a very good agreement of my results to those determined with other methods is observed. info:eu-repo/classification/ddc/530 ddc:530

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