<p>Apoptosis plays a key role in the regulation and development of healthy multicellular organisms throughout their lifetimes. The mitochondria play a key role in this cellular process, as it contains proapoptotic factors, which once released into the cytosol of the cell, results in the death of the cell. The Bcl-2 family of proteins play a key role in apoptosis, acting as the gateway between life and death of the cell. Proteins such as tBid and Bax act to permeabilize the mitochondrial outer membrane (MOM), releasing the proapoptotic factors into the cell’s cytosol. The interactions between these proteins and the mitochondrial outer membrane have yet to be fully understood. The lipid composition and cholesterol content of the membrane effectively inhibit or promote pore formation by Bax. Specifically, the addition of cholesterol into the membrane inhibits pore formation. This thesis attempts to further understand the effects cholesterol has on the structure of the MOM, and link those changes to the inhibited activity of Bax pore formation. MOM-like lipid bilayers were studied under varying temperatures and with the addition of cholesterol using x-ray reflectivity. Increasing temperatures from 10°C to 30°C resulted in bilayer thinning, as did decreasing cholesterol concentrations below 30%. From 10°C to 20°C, bilayer thickness showed a bell shaped profile, and changed to a linear decrease above about 20°C. This may assist Bax in pore formation, as it has also been observed to cause bilayer thinning. Increasing Cholesterol concentrations up to 30% resulted in little variation in bilayer thickness though hindrance of Bax pore formation is observed at content levels as low as 8%. Thus it is unlikely that bilayer thickening by cholesterol causes the inhibition of Bax pore formation. In addition, cholesterol was observed to increase the electron density of the core of the bilayer at concentration levels above 25%.</p> / Master of Science (MSc)

<p>Cancer occurs when cells acquire a number of mutations that trigger uncontrolled cell growth. The normal cellular response to this dysregulation of growth is the activation of programmed cell death. While focus in cancer research has been mainly concentrated in the mechanism of programmed cell death at the mitochondria, endoplasmic reticulum is slowly emerging as an essential platform for this regulatory mechanism.</p> <p>Bcl-2 is the founding member of the Bcl-2 family of protein, which contributes to the regulation of cell death at the mitochondria and at the endoplasmic reticulum. Previously in our lab, we have shown using MCF-7 cells stably expressing Bcl-2 targeted to the endoplasmic reticulum; they were protected from estrogen deprivation induced cell death. Thus the regulatory mechanism of Bcl-2 at the endoplasmic reticulum represents an interesting avenue to improve current cancer therapeutics.</p> <p>Two approaches were utilized to identify and characterize Bcl-2 and its interacting partners at the endoplasmic reticulum. Using an affinity tag fused to Bcl-2 that has been engineered to target the endoplasmic reticulum, tandem affinity purification was utilized to identify novel Bcl-2 interacting partners when estrogen receptor positive cells are treated with estrogen deprivation. Using fluorescent protein fused to the proteins of interest, Fluorescent Lifetime Imaging Measurement (FLIM) was used to characterize the interactions of Bcl-2 and its known interacting partner at the endoplasmic reticulum. The findings of this thesis verify the applications of the two aforementioned methods in the study of Bcl-2 interacting proteins at the endoplasmic reticulum.</p> / Master of Science (MSc)

<p>Bcl-2 family of proteins regulate apoptosis at the level of the mitochondrial outer membrane (MOM) through both protein-protein and protein-membrane interactions. While the role of the membrane as the “locus of action” has been recognized, the detailed molecular mechanisms and the consequences of the interactions of Bcl-2 family members with the membrane are yet to be fully understood. The findings presented here focus on the dynamic interactions of Bcl-2 proteins, most notably tBid with the MOM, and their functional significance on mitochondrial outer membrane permeabilization. We show that the activation of tBid is a multi-step process that is regulated by MOM lipids and proteins. The rate-limiting step in the activation of tBid is an elaborate conformational change that is facilitated by Mtch2, and is required for the activation and recruitment of Bax to the MOM. Furthermore, we demonstrate that binding of both tBid and Bax to the membrane is reversible and is governed by dynamic equilibria that potentially contribute to the propagation of the permeabilization signal within the cell for the regulation of apoptosis. We report that the transfer of tBid between membranes is accelerated by Bax and restricted by Bcl-XL, whereas the transfer of Bax between membranes is slower than and not influenced by tBid. Finally, by studying the effect of varying lipid composition on Bax-mediated permeabilization, we establish that electrostatic interactions mediate the binding of both tBid and Bim to the membrane. We demonstrate that while Bim does not exhibit any preference for a specific anionic lipid, tBid requires cardiolipin in order to undergo its conformational change at the membrane in the absence of Mtch2. Taken together, our work contributes to the growing understanding of the dynamic interactions and changes in conformation of Bcl-2 proteins at the MOM.</p> / Doctor of Science (PhD)

<p>Bid is a member of the Bcl-2 family of proteins, which are known as the regula- tors of apoptosis. Bid recruits Bax, another Bcl-2 family protein, which forms large oligomers that permeabilize the mitochonrdial outer membrane during apoptosis. In this thesis, Bid complexes embedded in a mitochondria-like supported lipid bilayer were investigated using single molecule fluorescence techniques. The bilayer, con- taining a lipophilic tracer, was formed on a mica surface and ATTO647 labelled Bid was added to it. For experiments where the effect of Bax on Bid complexes was investigated, a wild type Bax or a HiLyte488 labelled Bax was added as well. The protein-bilayer sample was imaged using total internal reflection fluorescence (TIRF). The formation of a fluid bilayer was confirmed by the observation of the lateral diffusion of DiD. Single particle tracking of the lipid molecules was used to measure the diffusion coefficent of DiD which was determined to be 2.2μm2 /s. The TIRF images also revealed two populations of Bid complexes, immobile and mobile. The diffusion coefficient of the observed Bid complexes was determined to be about three times slower than that of DiD (0.8±0.5μm2 /s). This provides evidence that mobile Bid is embedded in the bilayer. Image analysis of immobile Bid complexes showed a step-wise decrease in the fluorescence intensity due to photobleaching. The oligomeric distribution of the immobile Bid complexes was determined from the num- ber of steps, which corresponds to the number of particles in each complex. From these distributions it was concluded that the imaged immobile Bid existed mainly as monomers. However dimer and trimer complexes of Bid were also observed. The detected oligomeric distribution was not affected by the presence of either wild type Bax or Hilyte488 Bax. However Bid was imaged for the first time participating in Bax complexes. The acquired results somewhat differ from what had been observed in confocal imaging of the same samples, where mostly larger Bid complexes (dimers and up) were detected. We attribute the difference to the superior sensitivity of the TIRF method presented here.</p> / Master of Science (MSc)

Thèse numérisée par la Direction des bibliothèques de l'Université de Montréal.

Tableau d’honneur de la Faculté des études supérieures et postdoctorales, 2004-2005 / La mort cellulaire programmée (PCD) est un processus physiologique ou pathologique permettant l’élimination sélective de cellules devenues inutiles, endommagées ou infectées pour le maintien de l’intégrité ou l’adaptation (fitness) de l’organisme ou de la population cellulaire. Chez les végétaux, les mécanismes moléculaires régulant la PCD ne sont pas encore élucidés, mais la découverte que la protéine humaine anti-PCD Bax Inhibitor-1 (BI-1) est conservée chez les plantes, pourtant dépourvues de la protéine pro-PCD Bax, en a fait un candidat fort prometteur pour l’élucidation de sentiers de mort évolutivement conservés. En ce sens, cette thèse décrit la caractérisation d’orthologues de BI-1 isolés de Brassica napus (BnBI-1) et de Nicotiana tabacum (NtBI-1). Nous avons déterminé par des analyses informatiques et des études d’expression que BI-1 est une protéine membranaire intégrale possédant sept domaines transmembranaires putatifs et localisée au réticulum endoplasmique. Des essais fonctionnels dans des cellules humaines HEK 293 ont révélé que des orthologues végétaux de BI-1 peuvent inhiber la PCD (apoptose) induite par Bax dans ces cellules. Par ailleurs, des lignées cellulaires de tabac présentant des niveaux inférieurs de la protéine NtBI-1 grâce à l’expression d’un ARNm antisens entament un programme précoce de PCD suite à une déficience en carbone, démontrant ainsi le rôle anti-PCD intrinsèque de BI-1 dans des cellules végétales. Nous avons également découvert que la protéine NtBI-1 est surexprimée en présence de cytokinines (CK) dans des cultures cellulaires de tabac, et ce à des concentrations coïncidant avec l’établissement d’une réponse de stress, un phénomène impliquant des mécanismes de régulation post-transcriptionnels. La réponse cellulaire envers les CK comprend également un influx rapide de Ca2+ de l’apoplaste vers le cytosol. Cet influx est partiellement impliqué dans l’induction de la PCD mais non dans la signalisation menant à la surexpression de BI-1. L’ensemble de nos résultats indique que BI-1 est bel et bien un régulateur négatif de la PCD végétale, qui agirait au sein d’un sentier de mort évolutivement conservé. L’augmentation de l’accumulation de la protéine NtBI-1 lors de la réponse de stress envers les CK pourrait contribuer à la survie des cellules et laisse supposer que la protéine est impliquée dans l’activité anti-sénescence des CK. BI-1 s’insère dans un sentier où son niveau d’expression influence la capacité cellulaire à résister aux stress générés entre autres par une disette en carbone, et ce potentiellement via la modulation de l’homéostasie du Ca2+ intracellulaire. / Programmed cell death (PCD) is a physiological or pathological process allowing the selective elimination of useless, damaged or infected cells with the aim of maintaining the integrity or fitness of the remaining organism or cell population. In plants, molecular mechanisms regulating PCD are not yet elucidated, but the identification of functional plant orthologs of the human anti-PCD protein Bax Inhibitor-1 (BI-1), given that the pro-PCD protein Bax is absent in the plant kingdom, revealed the potential of BI-1 as an evolutionary conserved cell death regulator. Accordingly, this thesis describes the characterization of BI-1 orthologs isolated from Brassica napus (BnBI-1) and Nicotiana tabacum (NtBI-1). While combining bioinformatics analysis and localization studies using a fusion between BnBI-1 and the green fluorescent protein, we determined that BI-1 is an integral membrane protein provided with seven putative transmembrane domains localized at the endoplasmic reticulum. We also proceeded to functional assays in human HEK 293 cells, and we demonstrated that plant BI-1 orthologs can inhibit Bax-induced PCD (apoptosis) in these mammalian cells. On the other hand, we demonstrated that tobacco cell lines expressing lower levels of the NtBI-1 protein via an antisens mRNA induced an early PCD program under carbon starvation. We also discovered the up-regulation of NtBI-1 when cultured cells were grown in the presence of cytokinins (CKs), which correlated with the establishment of a stress response. The phenomenon involved post-transcriptional regulatory mechanisms of the BI-1 protein accumulation. Cellular response to CKs also involved a rapid influx of Ca2+ from the apoplast to the cytosol and this influx is partly involved in PCD induction but not in signaling leading to BI-1 modulation. Taken together, our data indicate that BI-1 is a negative regulator of plant PCD that would act in an evolutionary conserved death pathway. NtBI-1 protein over-accumulation in the stress response to CKs could contribute to cell survival and suggests the involvement of the protein in the senescence-delay activities of CKs. BI-1 is part of a pathway where its expression level influence cellular ability to resist to carbon starvation- or senescence-induced stresses, potentially via modulation of intracellular Ca2+ homeostasis.

Apoptosis represents one of the cell death mechanisms which is realized after the application of taxanes in breast cancer cell lines. Apoptosis induction can be principally triggered either by outer or inner pathway. The aim of the diploma thesis is to contribute to the elucidation of role and mechanisms of the inner mitochondrial pathway of apoptosis induction after taxane application (paclitaxel and SB-T-1216) employing a model of breast carcinoma cell lines SK- BR-3 (nonfunctional p53, functional capase-3) and MCF-7 (functional p53, nonfunctional caspase-3). Specifically, we tested the effect of both employed taxanes on mitochondrial membrane potential, ROS level and the expression and localization of proteins regulating inner mitochondrial pathway. Taxane application resulted in mitochondrial membrane dissipation in SK-BR-3 cell line. However, this was not shown in MCF-7 cell line. We found no changes in Bax and Smac/DIABLO expression after taxane application in both tested cell lines. There was a decrease of Bid expression after taxane application in SK-BR-3 line, but not in MCF-7 line. Taxane application did not lead to the translocation of Bax and Bid (tBid) proteins from cytosol to mitochondria in both tested cell lines. Similarly, there was no Smac/DIABLO release from mitochondria to...

Le cancer de la vessie représente un vrai problème de santé publique, avec une surveillance et suivi clinique à long terme en raison de l’importance des fréquences de récidives. La chimiothérapie reste souvent inefficace. L’objectif de cette thèse est donc la recherche de marqueurs sérologiques et moléculaires à valeur pronostique dans le cancer de la vessie qui peuvent servir à prédire la maladie. D’abord, nous avons étudié trois facteurs de transcriptions des lymphocytes T activées qui sont T-bet, GATA-3 et Bcl-6. Nous avons montré une surexpression de T-bet chez les malades à stade invasif et de haut grade, cependant, la surexpression de GATA-3 et Bcl-6 a été corrélée au stade superficiel et de bas grade. La survie a été corrélée avec le groupe des malades sans histoires de récidive ou progression et avec la surexpression de Bcl-6 et GATA-3. Cependant les malades qui expriment fortement T-bet répondent mieux au BCG. Ensuite, nous avons visé la détection de FasL et TRAIL solubles dans le sérum des malades atteints du cancer vésicale. Nous avons montré une surexpression de sFasL et sTRAIL chez les malades à stade superficiel et de bas grade. Le rôle anti-tumoral de ces cytokines a été confirmé sur deux lignées du cancer de la vessie montrant que le traitement avec le sérum riche en sFasL ou en sTRAIL diminue la viabilité cellulaire in vitro. A la fin de cette thèse, nous avons testé l’activation p-Akt dans la tumeur vésicale. Nous avons montré une surexpression de p-Akt au sein des tumeurs comparées au tissu sain adjacent, et au sein des malades à stade invasif et de haut grade. Akt semble être un marqueur de progression tumorale dans le cancer de la vessie. / Bladder cancer is the first most common urogenital cancer in men in Tunisia, with a high recurrence rate. Patients with muscle-invasive disease develop metastasis. The need for expensive continuous surveillance. In this thesis we try to search some candidate biomarkers. Their use for cancer staging and personalization of therapy at the time of diagnosis in order to identify a better treatment could improve patient care. The aim of this first part of our study was to investigate the clinical significance of three immune cell-related transcription factors, T-bet, GATA-3 and Bcl-6 in Tunisian patients with bladder cancer. We found that T-bet level was significantly higher in invasive carcinoma with high- grade. However, T-bet is predictive of response to BCG. On the contrary, the expression of GATA-3 and Bcl-6 was significantly higher in non-invasive carcinoma with low grade. We furthermore studied the effect of activation of soluble FasL and TRAIL molecule in bladder cancer. We demonstrate that the mean serum level of sFasL was higher in patients than in normal donors. sFasL was only higher than in sera of healthy donors where patients had superficial stage and low- and medium-grade cancer. sTRAIL was significantly lower in sera from patients with invasive and high-grade bladder carcinoma than in controls. Finally, we demonstrate that p-Akt levels in patients with invasive carcinoma and high-grade bladder cancer were significantly elevated compared to patients with non-invasive and low grade bladder cancer. Altogether, our results suggest that Akt activation can provide useful prognostic information.

O transplante autólogo de tecido ovariano constitui alternativa relevante na preservação da fertilidade e da função hormonal ovariana em mulheres sujeitas à falência ovariana prematura e infertilidade, por causas malignas, tratamentos adjuvantes ou cirurgias. É a única opção para crianças, fase pré-puberal e para mulheres que não podem retardar a quimioterapia ou não podem ser submetidas à estimulação do ciclo. O transplante ovariano autólogo pode ser, quanto ao local de reimplantação, ortotópico ou heterotópico e, quanto à conservação, a fresco ou após o período de criopreservação. As várias etapas envolvidas neste transplante são estudadas mundialmente na atualidade, como a retirada e preservação do tecido ovariano, as técnicas de criopreservação, o local apropriado para o reimplante e as possibilidades de redução da perda folicular. A avaliação da apoptose - morte celular programada - é útil na avaliação da rejeição e viabilidade dos enxertos de transplantes estabelecidos na prática clínica, tanto autólogos como heterólogos. Com o intuito de utilizar animais de maior porte, conseguir seguimento de médio prazo e realizar os procedimentos cirúrgicos por via laparoscópica, padrão ouro em humanos, o presente estudo utilizou como modelo experimental fêmeas suínas, em idade reprodutiva, da raça Minipig. Este projeto teve como propósito avaliar a influência da criopreservação e do local de implante na qualidade e na viabilidade do transplante autólogo de ovário, a fresco e após criopreservação, no tecido celular subcutâneo e na região intraperitoneal peri-infundibular. Foram avaliados a quantidade e a densidade folicular dos implantes e os aspectos morfológicos e histomorfométricos, bem como a apoptose, por meio da imunoexpressão de proteínas proapoptóticas- Bax e antiapoptóticas-Bcl-2, além da Caspase 3-clivada, fase final das vias extrínseca e intrínseca dos mecanismos de apoptose.Quarenta animais foram divididos em cinco grupos: Controle com ooforectomia (Grupo I), ooforectomia e transplante a fresco subcutâneo (Grupo II), a ooforectomia e transplante fresco intraperitoneal (Grupo III), ooforectomia e transplante criopreservado subcutâneo (Grupo IV) e ooforectomia e transplante criopreservado intraperitoneal (GrupoV). Os resultados mostraram que independente da técnica empregada, havia folículos em desenvolvimento e corpos lúteos em todos os tecidos ovarianos transplantados; que a contagem de folículos antrais não degenerados foi menor nos grupos após criopreservação em relação ao grupo controle e que a imunoexpressão sugestiva de apoptose ocorreu em todos os grupos transplantados, sendo maior nos transplantes intraperitoneais. Concluiu-se que a técnica utilizada para o transplante de ovário e criopreservação foi viável no modelo suíno, em tecido celular subcutâneo e na região intraperitoneal peri-infundibular. O transplante autólogo heterotópico subcutâneo apresentou melhores taxas de apoptose que o transplante ortotópico. / Autotransplantation of ovarian tissue is an important alternative to preserve fertility and hormonal ovarian function in women undergoing ovarian failure and premature infertilidade, because of cancer or surgery. It is the only option for infants, pre-pubertal patients and for women who can not delay chemotherapy or not may be subjected to stimulation of the cycle. The various steps involved in the transplant are studied worldwide today, as the removal and preservation of ovarian tissue, the techniques of cryopreservation, the appropriate site and mechanisms to reduce follicular loss. Assessment of apoptosis - programmed cell death-is useful in the study of the viability of the grafts and rejection of transplants established in clinical practice, both autologous and heterologous. In order to use larger animals, getting following medium term (over 21 days) and to perform surgical procedures by laparoscopy (gold standard in humans), this study used an experimental model sows, reproductive age, Minipig race. This project aims to evaluate the influence of cryopreservation and implantation site of the quality and viability of ovarian autografts, fresh and after cryopreservation, at subcutaneous site and at intraperitoneal site. We analyzed the quantity and density of follicular implants and the morphological and histomorphometric as well as apoptosis, by proteins immunoexpression antiapoptotic and proapoptotic. Forty animals were divided into five groups: Control with oophorectomy (Group I), oophorectomy and fresh transplantation to subcutaneous site (Group II), oophorectomy and fresh transplantation to intraperitoneal site (Group III), oophorectomy and transplantation of cryopreserved ovarian tissue to subcutaneous site (Group IV) and oophorectomy and transplantation of cryopreserved ovarian tissue to intraperitoneal site (Group V). We concluded that the autologous ovarian transplantation was feasible in the technical proposals, in subcutaneous and intraperitoneal site in the porcine model; that regardless of the technique, there was developing follicles and corpora lutea in all ovarian tissue transplanted; that antral non-degenerate follicle count was lower in groups after cryopreservation that in the control group and that the immunoexpression of apotposis occurred in all transplanted groups, more evident in intraperitoneal transplants

Ziel der vorliegenden Arbeit war es, die Rolle des pro-apoptotischen Proteins Bim am endoplasmatischen Retikulum (ER) und an den Mitochondrien zu untersuchen. Für diese Untersuchungen wurden zwei Isoformen von Bim verwendet, zum einen BimL, welches an den Motor Dynein Komplex gebunden ist, zum anderen BimS, welches im Zytosol lokalisiert ist. Um eine konditionale Expression von Bim zu erreichen, wurde Myc-markierte humane cDNA unter der Kontrolle des Tet-Off Systems in einen adenoviralen Vector kloniert. Eine Überexpression von BimL und BimS induzierte in der Prostatakarzinomzelllinie DU145 Bax- und Bak-abhängigen apoptotischen Zelltod. Eine Überexpression des anti-apoptotischen Proteins Bcl-2 lokalisiert am ER zeigte eine vollständige Hemmung der Bim-induzierten Apoptose, was die Wichtigkeit des ER unterstreicht. Überexpression von Bcl-2 an den Mitochondrien führte eine partielle Hemmung herbei. Bim Expression induzierte Bax- und Bak-abhängig den Zusammenbruch des mitochondrialen Membranpotentials. Dieses wurde ebenso in mit am ER lokalisiertem Bcl-2 Zellen beobachtet. Bcl-2 lokalisiert an den Mitochondrien verminderte dagegen mitochondriale Permeabilisation. Proteinanalysen zeigten eine Hochregulierung von ER-Stress Proteinen nach Bim Überexpression. Zusätzlich wurde Cytochrom c Freisetzung aus den Mitochondrien und Aktivierung von Caspase-9, -3 und -8 beobachtet. Mit einem Breitband-Caspase Hemmer konnte der Bim-induzierte Zelltod vollständig gehemmt werden, was zeigt, dass Caspasen essentiell sind. Zusammenfassend kann gesagt werden, dass Bim, parallel zum mitochondrialen Signalweg, ER-Stress auslöst und, dass Bim eine effektive Apoptose durch die Interaktion des ER und der Mitochondrien induziert. / The aim of this thesis was to investigate the role of the pro-apoptotic BH3-only protein Bim, at the endoplasmic reticulum (ER) and the mitochondria. For this purpose, a full length human myc-tagged Bim cDNA was cloned into an adenoviral vector, which allows for the conditional expression of the transgene under the control of a Tet-Off-system. Two different Bim isoforms were used for these investigations. One was BimL, which is bound to the motor dynein complex of the microtubule and the other one was BimS, which is localized in the cytosol. The enforced expression of each of these two isoforms in the prostate cancer cell line DU145, showed the capability of BimL and BimS to induce apoptosis via either Bak or Bax. Also, Bax- and Bak-dependent breakdown of the mitochondrial membrane potential upon overexpression of either Bim isoforms was measured. This effect was also observed in cells overexpression the anti-apoptotic protein Bcl-2 at the ER. However, targeting Bcl-2 to the mitochondria partially inhibited Bim-induced mitochondrial permeabilization. These findings indicated the execution of the intrinsic apoptotic pathway upon Bim signalling. Nevertheless, expression of Bcl-2 at the mitochondria partially suppressed Bim-induced apoptosis whereas ER-targeted Bcl-2 entirely prevented cell death induction by Bim underlining the importance of the ER. Further, an upregulation of ER stress proteins upon Bim expression was seen. Cytochrome c release form the mitochondria and activation of caspase-9, -3 and -8 was observed. In addition, the complete inhibition of Bim-induced cell death by a pan caspase inhibitor revealed that caspases are crucial. In conclusion, Bim induces the mitochondrial apoptotic pathway and, in parallel, triggers ER stress. It seems that Bim mediates cell death through the interaction of the mitochondria and the ER. The ER-mitochondria cross-talk leads to the amplification of the apoptotic death signal.