The aim of this study was to evaluate the aquaculture potential of a hybrid between the two largest African silurid catfish, Heterobranchus longifilis (HL) and Clarias gariepinus (CG) . A morphometric, meristic and karyological study showed that the hybrid shared some of the physical characteristics of both C. gariepinus and H. longifilis, while its chromosome complement and fundamental number (2N = 54, FN = 95), was intermediate between that of H. longifilis (2N = 52, FN = 92) and C. gariepinus (2N = 56, FN = 97). The HLxCG cross could therefore be regarded as a true hybrid. For the characters tested, no morphological or karyological differences were apparent between the HLxCG hybrids produced in West Africa and those produced in southern Africa. In southern Africa, the HL♂xCG♀ cross had higher fertilization and hatching rates than pure strain H. longifilis, C. gariepinus or the reverse cross. There was no difference in the survival of the HL♂xCG♀ hybrid larvae and C. gariepinus larvae up to the onset of exogenous feeding. Pure strain H. longifilis juveniles had a faster growth rate than the H. longifilis ♂ x C. gariepinus ♀ juveniles, but the hybrid always grew at a faster rate than C. gariepinus or the reverse cross. The HL♂xCG♀ cross was consequently chosen as the hybrid with the greatest potential for siluroid aquaculture in southern Africa. The HL♂xCG♀ hybrid showed evidence of partial gonadic, gametic and post-zygotic sterility in both sexes. The hybrid was not completely sterile, as it was artificially induced to spawn, and a small number of viable F₂ hybrid and F₁ hybrid x C. gariepinus larvae were produced. However, in the light of its probable reproductive strategy, it is highly unlikely that the hybrid would pose an ecological risk to the southern African region. The H. longifilis ♂ x C. gariepinus ♀ hybrid was compared to C. gariepinus for selected water quality preferences and tolerances. The hybrid had a wider temperature preference (28 °C to 34 °C) than C. gariepinus (28 °C to 30 °C), but appeared to be more dependent on aerial respiration than C. gariepinus. The air-breathing frequency of hybrid fish began to increase at dissolved oxygen concentrations below 3 .8 mg.ℓ⁻¹, while C. gariepinus only showed an increase in air-breathing frequency at concentrations below 3.0 mg.ℓ¹. The hybrid was more tolerant of un-ionised ammonia (96-hour LC₅₀ = 9.1 mg.ℓ⁻¹) than C. gariepinus (96-hour LC₅₀ = 6.5 mg.ℓ⁻¹), but their 96-hour LC₅₀ salinity tolerances were similar (10.8-11.0 g.ℓ⁻¹). The H. longifilis ♂ x C. gariepinus ♀ hybrid had a higher fillet yield (43.9 %) than C. gariepinus (38.9 %), but the crude protein content and amino acid profile of the two groups were similar. Catfish are traditionally grown in earthen ponds under semi-intensive conditions in southern Africa, at around 4 kg of fish per cubic meter of water (kg.m⁻³). However, the hybrid could tolerate densities of up to 415 kg of fish per cubic metre of water, if the water was exchanged hourly (kg.m⁻³.hr⁻¹), and the density at which yield was optimised was rounded off to 400 kg.m³.hr⁻¹. The high threshold density and water quality tolerances of the H. longifilis ♂ x C. gariepinus ♀ hybrid indicates that it is ideally suited for highly intensive aquaculture. It was concluded that it would be more productive to farm the HL♂xCG♀ hybrid on an intensive basis in southern Africa, than it would be to farm C. gariepinus in the traditional manner.

D.Sc. / Please refer to full text to view abstract

Two distinct compartmentalized isozymes of aldolase and triosephosphate isomerase were examined in the photoautotrophically and heterotrophically grown green alga Euglena gracilis. A comparison of the chemical and physical properties of the isozymes was carried out. Isozymes of phosphoglucose isomerase were isolated in homogeneous form from liver and muscle tissue of the fresh water catfish. The two organ-specific isozymes were essentially identical with respect to their molecular weights but exhibited different electrophoretic and kinetic properties, and amino acid compositions.

The top piscivore in Byllesby Reservoir, a 98.6 ha hydropower impoundment in southwestern Virginia is the flathead catfish Pylodictis olivaris. The most numerically abundant fish in the reservoir are centrarchids, specifically bluegill Lepomis macrochirus, redbreast sunfish L. auritus, smallmouth bass Micropterus dolomieu, and spotted bass M. punctulatus. A bioenergetics model was used to estimate the number of age-l and older centrarchids consumed annually by the flathead catfish population. These estimates were then compared to estimated abundances of each centrarchid species (age-1 and older) in the impoundment, resulting in an estimate of predation impact. / Master of Science

In Southeast Asia, the family Pangasiidae is important for commercial fisheries and aquaculture. Pangasianodon hypophthalmus (striped catfish) is the most economically important species farmed in Vietnam, with a total export value of 1.7 billion USD in 2012. Intensive aquaculture can lead to problems with major outbreaks of disease and Edwardsiella ictaluri and Aeromonas hydrophila represent two important bacterial pathogens in P. hypophthalmus aquaculture. Immunostimulants have proven to be a very useful food additive for the aquaculture industry, since they can be easily fed to fish to enhance their immune response at times of stress and to improve resistance to disease. The immune system of pangasius catfish has not been fully described, despite the recent growth in aquaculture for this species, and little is known about the effects of immunostimulants on disease resistance. Understanding the immune response is very important in order to evaluate the health status of the fish and assist in control of disease (including prevention) so that production levels by the aquaculture industry can be sustained. The aims of this thesis were to develop and standardise methods to elucidate and measure immune responses in P. hypophthalmus and then to use these with relevant disease models (A. hydrophila and E. ictaluri) and immunomodulators (β-glucans from different sources and at different doses) to determine if bacterial diseases can be controlled, and which functional immune responses and immune genes could be correlated with disease resistance. As a variety of different species from family Pangasiidae are economically important for aquaculture, initial work focused on the characterisation of the immunoglobulin IgM molecule in these species, and anti-P. hypophthalmus IgM mAbs were tested to determine if they cross-reacted between different Pangasiidae species (Chapter 2). Although affinity purification of IgM from the different fish species resulted in a purer preparation ammonium sulphate precipitation (14% w/w), the latter proved faster and easier to perform. The heavy (H) and light (L) chains of IgM from P. hypophthalmus were estimated to be 70-72 kDa and 25-26 kDa, respectively, using SDS-PAGE (12.5%). The L chains of IgM in the other Asian fish species examined were similar in molecular weight to P. hypophthalmus, while the H chains varied (P. gigas and P. larnaudii 76kDa, P. sanitwongsei 69kDa, H. filamentus 73kDa, P. borcoti and H. wyckioides 75kDa, C. bactracus 74kDa, C. macrocephalus 73kDa and C. carpio 70kDa), as did the native IgM molecules. Sedimentation velocity ultracentrifugation was used to determine the molecular weight of the whole IgM molecule from P. hypophthalmus as an alternative to the more commonly used native gels that are run under non-denaturing conditions, although this technique proved more complex. Anti–P. hypophthalmus IgM monoclonal antibodies (mAbs) cross reacted with all of the Pangasiidae species and were successfully applied in an enzyme-linked immunosorbent assay (ELISA) using mAb 23 to measure serum antibody response of P. hypoophthalmus following experimental infection with A. hydrophila by interperitoneal (I.P.) injection in Chapter 3 and E. ictaluri by immersion in Chapter 4. As P. hypophthalmus is a relatively new aquaculture species, there are few reports evaluating its immune response to pathogens. Thus, functional assays were standardised to evaluate both innate and adaptive immune responses of this species and then these assays used to compare immune response following stimulation with live and killed A. hydrophila. (Chapter3). Four treatment groups of 40 fish per group (53.2 ± 14.8g.) consisting of an untreated control group, a group injected I.P. with adjuvant (Montanide ISA 760 VG) only, a group injected with heat-killed A. hydrophila (1 x109 cfu ml-1 mixed with adjuvant), and a group injected with a subclinical dose of live A. hydrophila 2.7 x105 cfu ml-1 were used in the study. Samples were collected 0, 1, 3, 7, 14 and 21 days post injection (d.p.i.) to assess the immune response of fish. The results indicated that challenge with live or/and dead bacteria stimulated the immune response in P. hypophthalmus significantly above control groups with respect to specific antibody titre, lysozyme activity, phagocytosis and plasma peroxidase at 7 or/and 14 d.p.i. Moreover, on 21 d.p.i. total IgM, specific antibody titre and lysozyme activity from both live and dead A. hydrophila challenge groups were significantly different to the control groups. Differential immune responses between live and dead bacterial challenges were also observed as only live A. hydrophila significantly stimulated WBC counts and plasma peroxidase at 3 d.p.i. with the greatest increase in WBC counts noted at 21 d.p.i. and in phagocytosis at 14 d.p.i. By 21 d.p.i. only the macrophages from fish challenged with dead A. hydrophila showed significantly stimulated respiratory burst activity. Immunostimulants are food additives used by the aquaculture industry to enhance the immune response, and β-glucan is now commonly used for this purpose in aquaculture. In Chapter 4 the effect of the prebiotic β-glucan on the immune response and disease resistance of P. hypophthalmus was evaluated. The fish (60.3 ± 11.7 g.) were fed with a basal diet (control) or diets supplemented with fungal derived β-glucan at concentrations of 0.05 %, 0.1 %, or 0.2 % g/kg for four weeks. Fish fed 0.1 % commercial yeast derived β-glucan were also included as a positive control group. Samples were collected from fish on Days 0, 1, 3, 7, 14, 21 and 28. The results showed that fish fed with the highest two levels of fungal derived β-glucan had enhanced immune responses compared to the control group, with respiratory burst activity on all days examined and lysozyme activity on 7 days post feeding (d.p.f.) being significantly elevated (P<0.05) in the group fed with 0.2 % fungal derived β-glucan, while plasma anti-protease activity on 21 d.p.f., natural antibody titre on 3 d.p.f. and complement activity 7 d.p.f. and 14 d.p.i. were significantly enhanced (P<0.05) in the group fed 0.1 % fungal derived β-glucan. The lowest dose of fungal derived β-glucan (0.05 %) appeared insufficient to effectively stimulate the fish’s immune response. WBC count, respiratory burst, lysozyme activity and complement were useful as an early indication of immunostimulation (1 to 7 days). Four weeks after feeding with the different diets, the fish were experimentally infected with E. ictaluri by immersion using 8 x104 cfu ml-1 for 1 h and mortalities were monitored for 14 days. There was a great deal of variation in the level of mortalities within the four replicate tanks for each dietary group. Although the in vivo challenge results showed no statistical differences between the groups fed on the different diets, the highest mortalities were observed in group fed with the control diet and the lowest mortalities were observed in the groups fed with commercial yeast derived β-glucan and 0.2 % fungal derived β glucan. Immune gene expression following stimulation with β-glucan and challenge with E. ictaluri was investigated in Chapter 5.

M.Sc. (Zoology) / Please refer to full text to view abstract

Orientador: Claudio Oliveira / Coorientador: Mônica Sônia Rodriguez / Banca: Rberto Esser dos Reis / Banca: Flavio Cardoso Tadeu Lima / Banca: Ilana Fishberg / Banca: Daniela Calcagnoto / Resumo: O gênero Rineloricaria é composto atualmente por 65 espécies válidas, que se distribuem por quase toda a região Neotropical. Por ocuparem grande variedade de habitats, as espécies desse gênero apresentam intensa diversidade morfológica, o que dificulta o entendimento da taxonomia e, sobretudo, dos processos evolutivos das espécies e de seus caracteres morfológicos. Nesse sentido o presente trabalho buscou investigar a evolução do gênero Rineloricaria, sob os aspectos taxonômicos, ecomorfológicos e biogeográficos, baseando-se em análises filogenéticas moleculares. Os resultados demonstraram que esse gênero é um grupo monofilético que se originou há aproximadamente 15 milhões de anos na região do sistema de drenagens do paleo Amazonas-Orinoco, e que a evolução dos sistemas de drenagens neotropicais refletiu diretamente nas atuais distribuições das espécies do gênero. Por outro lado, fatores ambientais específicos nortearam a seleção de determinados conjuntos de caracteres de forma convergente, caracteres esses anteriormente utilizados na descrição de grupamentos fenéticos, que por sua vez se demonstraram não naturais / Abstract: Rineloricaria currently comprises 65 valid species, which are widespread in the Neotropical Region. Because these species occupy a great variety of habitats, they present a wide intra and interspecific morphological diversity, which difficult the understanding of the taxonomical and a specially the evolutionary process of these species and of their morphological characters. In this sense, this study sought to investigate the evolution of Rineloricaria genus, under taxonomical, ecomorphological and biogeographical aspects, based on molecular phylogenetic analyses. Results show that this genus is a monophyletic group, which originated about 15 million years ago in the region of the paleo-Amazonas-Orinoco drainage system, and that the evolution of the neotropical drainage systems reflected directly in the current distribution of Rineloricaria species. On the other hand, specific environmental factors guided the evolution of some characters in a convergent way, some of them previously used in the description of phenetic groups, which in turn showed to be artificial. This study contributes to the understanding of the evolutionary processes of Rineloricaria species, and also proposes alternative routes of dispersion and colonization of neotropical fishes / Doutor

The Neotropical catfish Pterygoplichthys pardalis produces a harsh stridulation sound upon manual capture. This stridulation sound is made on the abduction of the pectoral fin spine, and is accomplished by friction of a ridged dorsal condyle against a rough spinal fossa of the cleithrum in the pectoral girdle. The sound produced has an average frequency of 121 Hz, and is used with other anti-predator adaptations such as bony subdermal armor and defensive fin-spreading. Pterygoplichthys pardalis does not display behavioral modification in response to conspecific stridulation sound, and therefore it is likely that stridulation sound in P. pardalis is being used as a predator deterrent.

Thesis (Ph.D.) -- Mississippi State University. Department of Wildlife and Fisheries. / Title from title screen. Includes bibliographical references.

Loricariidae is a very diverse family of catfishes found primarily in the Amazon River basin. These catfishes have a unique characteristic feature of having fenestrae (holes) in the skull region (compound pterotic bone) adjacent to their bi-lobed swim bladder. Since the swim bladders and the compound pterotic may act as an external ear for hearing in this taxon, I hypothesized that these swim bladders structures have an acoustical functional in the loricariid Otocinclus affinis. In order to understand the development of these structures in O. affinis, I first monitored the ontogeny of the compound pterotic bone by clearing and staining of fish ranging total length from 0.75 to 3.5 cm. the swim bladders and fenestrated compound pterotic bone were developed at early larval stages (by 5.25 mm TL). Second I examined the role of swim bladders in hearing in adult O. affinis, by testing the hearing sensitivity before and after swim bladder deflation. Hearing thresholds were determined electrophysiologically by recording auditory evoked potentials (AEP). Swim bladder deflation increased hearing thresholds by 19 – 23 decibels (dB). I then tested the role of the compound pterotic bone fenestrae in hearing by covering them with a tissue adhesive (n-butyl cyanoacrylate) and recording the hearing thresholds. Covering fenestrae increased hearing thresholds by 4 – 11 dB. Future experiments are required to more precisely determine the acoustical role of these peripheral auditory structures in O. affinis.