In the northern Gulf of Mexico, hypoxia occurs annually during the summer on the Texas-Louisiana shelf. This study examines the distribution of particulate and dissolved components relative to hydrography, to better understand the processes controlling the development of hypoxia. Particulate matter on the Texas-Louisiana Shelf has three major sources – river plumes, primary production, and resuspended sediments. The sources and processes controlling distribution and transport of particles are investigated using optical proxies (backscattering, chlorophyll fluorescence, Colored Dissolved Organic Matter fluorescence (CDOM)), temperature, salinity, dissolved oxygen (DO), and in-situ sampling during June and August 2011 cruises of the Mechanisms Controlling Hypoxia program (hypoxia.tamu.edu). Discrete samples of particulate matter (PM) and particulate organic carbon (POC) concentration were obtained for analysis and calibration of optical instruments interfaced with a profiling CTD, a towed undulating CTD (Acrobat), and the ship’s flow-through system along the shelf from south of Galveston, Texas, to east of the Mississippi delta. The results of this study support a previously hypothesized concept of three primary areas of organic and inorganic particle composition and processes that dominate those areas – river-dominated water, highly productive surface waters, and clear, nutrient-poor low-productivity surface waters. The distribution and bulk composition of particulate matter in the northern Gulf of Mexico, plus the distribution of chlorophyll fluorescence and CDOM suggest that subpycnocline primary production plays a role in determining oxygen concentration in subpycnocline waters away from the river-dominated water.

No description available.

Brassica napus is grown as an edible oil (canola) and an industrial oil (HEAR). Its fatty acid profile and chlorophyll concentration affect the quality. It is important to develop accurate and efficient methods to evaluate these traits. The first objective of this study was to improve the single nucleotide polymorphism (SNP) and sequence characterized amplified region (SCAR) molecular markers for erucic acid genotypes in the Bn-FAE1.1 and Bn-FAE1.2 genes in the A and C genomes in Brassica napus originally developed by Rahman et al. (2008). When put into practice, the error rate was unacceptably high. With the modifications that were made to the protocols, the overall accuracy remained relatively consistent indicating that further improvements are still required. The second objective was to develop a near infrared reflectance (NIR) based calibration equation for chlorophyll concentration in whole Brassica napus seeds. In this case, an equation was successfully created.

Glancing angle laser induced fluorescence was used to monitor the kinetics of the photodegradation of chlorophyll at the surface of various salt solutions. The loss was measured using varying wavelengths of actinic radiation in the presence and absence of gas phase ozone. The loss rate of illuminated chlorophyll was faster on salt water surfaces than fresh water surfaces, both in the presence and absence of ozone. On salt water surfaces, the dependence of the loss rate on [O3(g)] was different under illuminated conditions than in the dark. This was further investigated by measuring the excitation spectra and the dependence of chlorophyll loss on the concentration of salts at the salt water surface. The possible production of reactive halogen atoms is the likely reason for the observed enhancement. The following results provide evidence of photosensitized oxidation of halogen anions, in the UV-visible range of the spectrum, resulting in halogen atom release.

Methods were developed to study delayed light emission (luminiscence) and fluorescence changes in intact leaves of plants. Delayed light emission, detected from plants in darkness, was used to produce images of the plant leaves. The procedure was termed "phytoluminography". The use of the method is suggested for dia- nostic purposes at early stages of disturbances of the leaf tissues, not detectable with the naked eye. The delayed light emission is associated with the photochemistry of photosystem II and the light induced conversion and storage of energy in the thylakoid membrane system of chloroplasts. Fluorescence yield changes were induced by lowering temperature between 20 C and -20 C. The temperature induced fluorescence changes in leaves parallel the temperature induced changes in isolated chloroplasts in reaction preparations mediating photosynthetic electron transport from endogenous water splitting to added NADP. At above freezing temperatures, lowering the temperature at a constant rate of 1 C per minute caused supressed electron transport and increased fluorescence yield which were linearely dependent on the temperature change in frost resistent plants. Repeated freeze-thaw cycles between 20 °C and -20 °C induced variable fluorescence yield changes which were gradually depleated to F0 or Fm when the electron transport was injuried on the oxidizing or on the reduzing side of photosystem II, respectively. The temperature induced fluorescence changes were used to characterize plants with different ability to withstand freezing temperatures. The method also discriminates between plants of different frost resistance, and the method was used in screening for frost tolerance. / <p>Diss. (sammanfattning) Umeå : Umeå universitet, 1981, härtill 5 uppsatser.</p> / digitalisering@umu

The location of fronts has a direct influence on both the physical and biological processes in the Southern Ocean. However, until recently fronts have been poorly resolved by available data and climate models. In this thesis we utilise a combination of high resolution satellite data, model output and ARGO data to improve our basic understanding of fronts. A method is derived whereby fronts are identified as local maxima in sea surface height gradients. In this way fronts are defined locally as jets, rather than continuous-circumpolar water mass boundaries. A new climatology of Southern Ocean fronts is presented. This climatology reveals a new interpretation of the Subtropical Front. The currents associated with the Subtropical Front correspond to the western boundary current extensions from each basin, and we name these the Dynamical Subtropical Front. Previous studies have instead suggested that the Subtropical Front is a continuous feature across the Southern Ocean associated with the super gyre boundary. A comprehensive assessment of the relationship between front locations and wind stress is conducted. Firstly, the response of fronts to a southward shift in the westerly winds is tested using output from a 100 year climate change simulation on a high resolution coupled model. It is shown that there was no change in the location of fronts within the Antarctic Circumpolar Current as a result of a 1.3° southward shift in the westerly winds. Secondly, it is shown that the climatological position of the Subtropical Front is 5-10° north of the zero wind stress curl line, despite many studies assuming that the location of the Subtropical Front is determined by the zero wind stress curl. Finally, we show that the nutrient supply at ocean fronts is primarily due to horizontal advection and not upwelling. Nutrients from coastal regions are entrained into western boundary currents and advected into the Southern Ocean along the Dynamical Subtropical Front. / <p>At the time of the doctoral defense, the following paper was unpublished and had a status as follows: Paper 4: Submitted.</p>

Research in the use of ozone in water treatment conducted by many authors support the idea that the nature and characteristics of natural organic matter (NOM) present in raw water determines the efficiency of ozonation in water purification. An ozone contact chamber was designed and made to allow pre-ozonation of water to take place. The concentration of ozone in the chamber was determined using the Indigo method. For the duration of one year, water samples were collected from four different sampling sites and analyzed to determine their overall ecological status with regard to several variables such as pH, chlorophyll-a, SAC254, turbidity, DOC, algal species composition and sum of NOM. Two dams sites and two riverine sites were chosen, Hartbeespoort Dam (a hyper-eutrophic impoundment), Boskop Dam (a mesotrophic impoundment), Midvaal Water Company at Orkney and Sedibeng Water at Bothaville. The samples were treated in Jar Tests with FeCI3 and the same variables were measured. Preozonation followed by Jar Tests was performed on each sample at twoconcentrations of ozone and the variables were measured to examine the efficiency of ozonation. In general, the ph was high and stayed the same for all the samples and for all the treatments. DOC was variable and showed no relationship to any other variable or to the treatments. Hartbeespoort Dam was found to be a eutrophic impoundment characterized by high algal bloom of the cyanobacteria Microcystis sp., Turbidity, SAC254, and the sum of NOM were lower than for the riverine sites but higher than for Boskop Dam. The NOM constituted more intermediate molecular weight(1MW)and low molecular weight (LMW) fractions than the riverine sites. Ozone was effective in reducing chlorophyll-a, turbidity and SAC254 from Hartbeespoort Dam, but the presence of large numbers of algal cells interferes with its efficiency. Release of cell-bound organics after ozonation can lead to increases instead of decreases in these variables. Jar Test results demonstrate that ozonation improves water quality when compared to conventional treatment although the interference of algal cells can alter results. Boskop Dam is a mesotrophic impoundment characterised by low productivity, low SAC254, tow turbidity and low sum of NOM. However, it has a large portion of the LMW fraction of NOM present. This LMW fraction affects the treatment process as this fraction is not acted upon by ozone. Therefore it was found that ozonation did not improve the quality of the water when compared to conventional treatment. The two riverine sites, Midvaal and Sedibeng were similar to each other. Both sites had high algal productivity with high chlorophyll-a values indicative of algal blooms observed at certain times. These blooms consisted either of members of Bacillariophyceae or Chlorophyceae. High turbidity and SAC254 was observed during the rainy season and was related to the high percentage HMW and IMW fractions of NOM present. There was correlation between the turbidity and SAC254 of these sites leading to the assumption that the turbidity of the river is due to the presence of HMW humic fractions of NOM. Ozonation was effective in improving water quality with respect to turbidity, SAC254 and chlorophyll-a removal, both on its own and after conventional treatment when combined with a coagulant. However, the species of algae present affects ozonation as members of Bacillariophyceae are not affected by the actions of ozone because of the presence of a silica frustule whereas members of Chlorophyceae are easily removed by ozone. In general, ozone acts upon the HMW and LMW fractions of NOM causing them to breakdown into smaller fractions. Ozone has no effect on samples that have a high percentage of the LMW fraction of NOM. This LMW fraction is more readily removed by conventional treatment than by ozonation. The presence of large numbers of algal cells as well as the species of cells can negatively affect the treatment process with regard to ozone. / Thesis (M. Environmental Science (Water Science))--North-West University, Potchefstroom Campus, 2007.

Thesis (Ph.D. (Botany))--North-West University, Potchefstroom Campus, 2009.

Brassica napus is grown as an edible oil (canola) and an industrial oil (HEAR). Its fatty acid profile and chlorophyll concentration affect the quality. It is important to develop accurate and efficient methods to evaluate these traits. The first objective of this study was to improve the single nucleotide polymorphism (SNP) and sequence characterized amplified region (SCAR) molecular markers for erucic acid genotypes in the Bn-FAE1.1 and Bn-FAE1.2 genes in the A and C genomes in Brassica napus originally developed by Rahman et al. (2008). When put into practice, the error rate was unacceptably high. With the modifications that were made to the protocols, the overall accuracy remained relatively consistent indicating that further improvements are still required. The second objective was to develop a near infrared reflectance (NIR) based calibration equation for chlorophyll concentration in whole Brassica napus seeds. In this case, an equation was successfully created.

Thesis (Ph.D. (Botany))--North-West University, Potchefstroom Campus, 2009.