Thesis (MSc)--University of Stellenbosch, 2011. / ENGLISH ABSTRACT: The current biodiversity crisis requires creative initiatives for mitigating further biodiversity loss. The use of ecological networks (ENs) is such an initiative. The South African forestry industry recognizes that there is loss of biodiversity at the smaller patch scale, while attempting to mitigate this loss at the landscape scale by implementing largescale ENs. The aim of this study was to determine how representative grassland biodiversity in ENs are of similar habitat in a nature reserves (NR). The study was conducted in the northeast of the KwaZulu-Natal Province, adjacent iSimangaliso Wetland Park, which is a natural World Heritage site. A systematic approach compared a wide range of taxa, namely plants, decomposition macrofungi, vertebrates (birds and large mammals) and faunal manifestations (e.g. molehills, dung and ant nests) between the EN and nature reserve, while controlling for differences in disturbance regime. Species richness was compared using Mann-Whitney U tests, while differences in species composition were determined using Correspondence Analyses, Multi-Dimensional Scaling and Analyses of Similarity. Grassland ENs had significantly less plant species. In addition, there were differences in plant and fungi species composition. Differences were probably caused by (1) degree of isolation i.e. proximity to source habitat patches in the surrounding matrix, and (2) habitat quality. Habitat quality was determined by local disturbance regimes (e.g. grazing and fire) and plantation-induced drought for plants, and size and amount of coarse woody debris for fungi. In addition, significant differences in abundances of mole hills (NR>EN) and small mammal burrows (EN>NR) might have had an effect on succession and regeneration of plant communities. There were differences in plant species composition between grassland EN and that at the adjacent nature reserve. However, differences between EN and NR were small when compared to differences between habitat types at the landscape spatial scale. It is concluded that grassland ENs among forestry plantations contribute to biodiversity conservation in the commercially-productive landscape. This approach to land use planning should be explored for other commercial land uses. / AFRIKAANSE OPSOMMING: Die huidige biodiversiteitskrisis vereis kreatiewe strategieë om ‘n verdere verlies in biodiversiteit te bekamp. Ekologiese Netwerke (EN’e) is een voorbeeld van sulke kreatiewe strategieë. Die Suid Afrikaanse bosbou-industrie erken die verlies in biodiversiteit wat kenmerkend in plantasies gevind word. Implementering van grootskaalse EN’e kan egter die verlies aan biodiversiteit, wat in plantasies ondervind word, temper. Die doel van hierdie studie was om vas te stel hoe goed biodiversiteit in grasveld EN’e soortgelyke habitat in ‘n nabygeleë natuurreservaat verteenwoordig. Die studie was uitgevoer in die noordooste van KwaZulu-Natal, langs iSimangaliso Wetland Park wat ‘n wêrelderfenisgebied is. Ons het ‘n stelselmatige benadering gevolg waartydens ‘n wye verskeidenheid taksa, naamlik plante, makro-fungi, vertebrate (groot soogdiere en voëls) en tekens van diere-aktiwiteit (bv. miersneste, dieremis en molshope), in die EN vergelyk is met die van ‘n natuurreservaat terwyl ons vir verskillende versteuringe gekontrolleer het. Spesiesrykheid is vergelyk met Mann-Whitney U toetse terwyl verskille in spesiessamestelling vasgestel is met Correspondence Analyses, Multi-Dimensional Scaling en Analyses of Similarity. Daar was ‘n statisties beduidende verskil in die hoeveelheid spesies tussen grasveld EN’e en die natuurreservaat. Grasveld EN’e het minder plant spesies gehad. Boonop was daar verskille in die samestelling van plant en fungi gemeenskappe. Verskille was waarskynlik veroorsaak deur (1) isolasie of die hoeveelheid nabygeleë habitatbronne in die omliggende omgewing, en (2) habitat kwaliteit. Habitat kwaliteit word bepaal deur versteuringe (bv. brand en beweiding) en die uitdrogingseffek van plantasies vir plante, en die hoeveelheid en grootte van growwe houtagtige puin vir fungi. Daar was ook beduidende verskille in die hoeveelheid molshope (NR>EN) en klein soogdier gate (EN>NR), wat moontlik ‘n effek kon hê op suksessie en herstel van plantgemeenskappe. Daar was verskille in plantspesiessamestelling tussen grasveld EN’e en die van die langsliggende natuurreservaat. Hierdie verskille was egter klein wanneer dit vergelyk word met die verskille tussen verskillende soorte habitatte in die landskap. Daarom kom ons tot die gevolgtrekking dat grasveld EN’e tussen bosbouplantasies bydra tot die bewaring van biodiversiteit in kommersiële landskappe. Hierdie benadering tot grondgebruik behoort verder verken te word vir ander kommersiële bosbou en boerderypraktyke.

Thesis (MScConEcol (Conservation Ecology and Entomology))--University of Stellenbosch, 2011. / ENGLISH ABSTRACT: Heuweltjies are below ground termitaria found along the west coast and the south-western and -eastern Cape. They traversing different climates, soil and vegetation types within the Succulent Karoo and Fynbos biomes. From a birds eye view, heuweltjies appear as near-circular landscape features, demonstrating clear difference in vegetation structure to their surroundings. A study of aspects of the structure and function of heuweltjies, mima-like mounds of south-western South Africa was undertaken. The main aim of the study was to investigate topsoil properties and processes and vegetation structure and the ecophysiology of plants growing on these mounds, and compare it to areas off these patches. Four study sites across a rainfall gradient were chosen for soil and vegetation studies (two within the Succulent Karoo and two at the Fynbos biome). Ten sampling sites on heuweltjies and 10 off heuweltjie (interpatch) were chosen at each study site for these analyses. Soils samples from the top 10 cm were analysed for total nitrogen (N) and carbon (C) content, phosphorus (P) concentrations, particle-size distributions, pH and electrical conductivity (related to salinity). Soil biogeochemistry studies (i.e. potential N mineralization, potential soil respiration and phosphatase activity) were also done in the laboratory. In the field, the cover of soil cryptogams, selected plant growth forms and selected physical variables at each site, on and off heuweltjies, were estimated on 1m2 grids. Two of the study sites, one in the Succulent Karoo and one in Fynbos, were chosen for field measurements of stomatal conductance, predawn and midday xylem water potentials of two growth forms (deciduous and evergreen non-succulent shrubs) at selected times in the duration of the study. Leaf samples were taken to make once-off measurements of specific leaf area, C and N isotope compositions (δ13C, δ15N), and foliar N content. Furthermore, a fertilization experiment that has been running at the Tierberg Karoo Research Centre (Succulent Karoo) since 1997, where 10g m-2 of N have been added to interpatch vegetation twice annually, was included in the stomatal conductance and xylem water potential studies. The aim of including the fertilization experiment was to ascertain whether interpatch vegetation will eventually resemble heuweltjie vegetation in ecophysiology following N fertilization. Soil water probes were inserted, 10 cm deep, on one on heuweltjie and one off heuweltjie site for the long-term estimation of gravimetric water content and temperature at the Tierberg Karoo Research Centre. Heuweltjie soils were found to be hotspots for nutrients and biogeochemical activity. They had elevated levels of total % C, % N and available P (mg kg-1) compared to surrounding interpatch soils. pH and electrical conductivity (μS cm-1) of these soils were also high compared to interpatch areas. Heuweltjie soils have higher silt content and retain more water, and for a longer period following a rainstorm. Potential soil respiration, potential N mineralization and alkaline and acid phosphatase activity were generally higher on heuweltjies.Cover of the selected plant growth forms differed little between heuweltjies and the surrounding vegetation but site differences were observed. Heuweltjies differed from interpatches in the cover of soil cryptogams, with higher cover of mosses and lower cover of lichens on mounds. There was higher cover of plant litter and termite frass on the heuweltjies.There was a decrease in soil available P and increase in non-succulent shrub cover from low to high rainfall areas. On the other hand no significant differences were found in the xylem water potential of interpatch and heuweltjie plants at either of the study sites. At the Tierberg Karoo Research, stomatal conductance of interpatch plants was higher and water use efficiency (δ13C) lower compared to that of heuweltjie plants suggesting some level of water stress for heuweltjie plants at this site. Here, heuweltjie plants also had higher foliar N, lower C/N ratio values, signs of high photosynthetic potential and highly decomposable litter and higher δ15N. At Jonaskop, stomatal conductance and water use efficiency did not differ between heuweltjies and interpatch plants. There were also no differences in foliar N concentrations, C/N ratios and δ15N between heuweltjie and interpatch plants at this site. Plants growing in high N plots (the fertilizer plots) had higher xylem water potential and more variable stomatal conductance than those growing in control plots. The results of this study have shown heuweltjies to be hotspots for nutrients and biogeochemical cycling, and given enough water, will be ideal patches for plant growth. In the Succulent Karoo, high salinity (and finer textured soils) on the heuweltjies may contribute to water stress during dry periods, and together with disturbance, provide bottom-up controls on plant physiology, and ultimately, vegetation structure. In the Fynbos, plants may be limited by nutrients on heuweltjies, possibly because of increased interspecific competition, while increased rainfall may also lead to more nutrients leaching from the topsoils. The results presented are especially relevant to restoration programs, and may shed some light on restoration trajectories after overgrazing, cultivation and mining activities. / AFRIKAANSE OPSOMMING: Heuweltjies is ondergrondse termitaria wat langs die weskus, die suid-wes en oos Kaap van Suid Afrika voorkom. Hulle kom voor onder verskillende klimaatstreke, grondtipes en planttipes wat binne die Sukkulente Karoo en Fynbos biome voorkom. Vanuit die lug uitgesien, verskyn heuweltjies as sirkelvormige landskapseienskappe, wat duidelike verskille in plant struktuur en die omringende omgewing demonstreer. ʼn Studie van aspekte van struktuur enfunksie van ʼn heuweltjies, mima-agtige hope vansuidwestelike Suid-Afrikais onderneem. Die hoofdoel van die studie was om die eienskappe van oppervlakgrondeen -prosesse, plant struktuur, en die ekofisiologie van plante wat op heuweltjies groei te ondersoek, en dit te vergelyk met areas af van hierdie kolle. Vier studieareas wat oor „n reënvalgradient strek is gekies vir grond en plantegroei studies (twee binne die Sukkulente Karoo en twee binne die Fynbos biome). Tien monsterareas op heuweltjies en 10 af van heuweltjies (omringende areas) is gekies binne elke studiearea vir die bogenoemde analises. Grondmonsters van die boonste 10 cm van die grond is geneem en geanalieseer vir totale stikstof (N) en koolstof (C), fosfor (P) konsentrasies, gronddeeltjiegrootte, pH, en elektriese geleidingsvermoë, (hou verband met soutgehalte). Grond biogeochemie studies (d.i. potensiële stikstof mineralisasie, potensiële grond respirasie en fosfatase aktiwiteit) is ook in die laboratorium uitgevoer. In die veld was die dekking van grond kriptogame, geselekteerde plant groeivorms en fisiese veranderlikes by elke lokaliteit, beide op en van heuweltjies op 1m2vierkante bereken. Twee studie lokaliteite, een in die Sukkulent Karoo en een in die Fynbos, is gekies vir veld metings van huidmondjiegeleiding, voor dagbreek en middag xileem potensiale van twee groei vorms (bladwisselende en immergroen nie-sukkulente struike) op geselekteerde tye gedurende die studie. Blaarmonsters is geneem om eenmalige metings te maak van die spesifieke blaararea, C en N isotoop komposisies (δ13C, δ15N), en blaar N inhoud. Verder is „nbemestingseksperiment wat by die Tierberg Karoo Navorsing Sentrum (Sukkulente Karoo) loop sedert 1997, waar 10gm-2 van N jaarliks twee keer bygevoeg word by die plante wat tussen heuweltjies groei ingesluit in die stomata geleiding en xileem water potensiaal studies. Die doel van die bevrugting eksperiment was om vas te stel of die omliggende plante (af van heuweltjies) uiteindelik soos die van die heuweltjiessal lyk in terme van ekofisologie nadat dit met stikstof bemes is. Grondwater monitoreringsapparaat was ingesit (10cm diep) op een op heuweltjie en een lokaliteitaf van die heuweltjie vir die langtermyn bepaling van gravimetriese water inhoud (m3m-3) en temperatuur by die Tierberg Karoo Navorsing Sentrum. Daar is gevind dat grond op heuweltjies “skerpkolle” is vir voedingstowwe en biogeochemiese aktiwiteit. Hulle het ook verhoogte vlakke van totale %C, % N, en beskikbare P (mg kg-1) teenoor die omliggende areas om die heuweltjies. pH en elektriese geleidingsvermoë (μS cm-1) van hierdie gronde was ook hoër in vergelyking met die omliggende areas. Heuweltjie grond het „n hoër sout inhoud gehad en behou meer water vir ʼn langer periode na ʼn reënstorm. Potensiële grond respirasie, potensiële stikstof mineralisasie, en alkaliese en suur fosfatase aktiwiteit is oor die algemeen hoër op heuweltjies. Die voorkoms van die geselekteerde plant groeivorms verskil min tussen heuweltjies en die omliggende omgewing, maar verskille tussen studie areas is opgemerk. Heuweltjies het verskil van areas af van heuweltjies in die voorkoms van grond kriptogame, met ʼn hoër voorkoms van mosse en ʼn laer voorkoms van ligene op die heuweltjies. Daar was hoër voorkoms van plantafvalmateriaal en termiet uitwerpsel op die heuweltjies. Daar was ʼn afname in grond P (mg kg-1) en ʼn toename in nie-sukkulente struik bedekking van lae tot hoë reënval areas. Daar was geen verskil in die xileem water potensiaal van plante op die heuweltjies of af van die heuweltjies by enige van die studie lokaliteite nie. By die Tierberg Karoo Navorsing Sentrum was huidmondjie geleiding van plant in die areas tussen heuweltjies hoër en die water gebruik doeltreffendheid (δ13C) laer in vergelyking met die van die heuweltjie plante, wat op„n sekere vlak waterstres dui in heuweltjie plante by hierdie studiearea. Hier het heuweltjie plante ook hoër blaar N, laer C/N waardes, tekens van hoër fotosintetiese potensiaal en hoogs afbreekbare afvalmaterialgehad asook hoër δ15N. By Jonaskop het huidmondjie geleiding en water gebruik doeltreffendheid nie verskil tussen heuweltjie en omliggende plante nie. Daar was ook geen verskille in blaar N konsentrasies, C/N verhoudings en δ15N tussen heuweltjie en omliggende plante by hierdiestudiearea nie. Plante wat groei in hoë stikstof plotte, het hoër xileem water potensiaal (minder stres) en meer veranderlike stomatal geleiding as die plante wat in die kontrole plotte groei. Die resultate van die studie het getoon dat heuweltjies “skerpkolle” is van voedingstowwe en biogeochemiese siklusse, en gegewe genoeg grondwater, sal ideale areas wees vir die groei van plante. In die Sukkulente Karoodra hoë soutgehalte (en fyner grond teksture) op die heuweltjies by tot water stres gedurende droë tye, en saam met versteurings dra dit by tot grond tot plant kontrole op plantfisiologie, en uiteindelik plant gemeenskapsstruktuur. In die Fynbos word plante op die heuweltjies beperk deur te min voedingstowwe, moontlik omdat daar ʼn toename is in intraspesifieke kompetisie, terwyl hoër reenvalkan lei tot hoër loging van voedingstowwe vanuit die bogrond. Die resultate wat hier gerapporteer word is veral relevant vir restourasieprogramme, en mag lig werp op restourasie trajekte na oorbeweiding, aanplanting van gewasse en mynbou-aktiwiteite.

Thesis (MScConEcol (Conservation Ecology and Entomology))--University of Stellenbosch, 2011. / ENGLISH ABSTRACT: Insect pollinators play an important role in producing crops in global agriculture. Pollinatordependent crops contribute to maintaining a healthy variety in the human diet and often have a high market value, beneficial for local or regional economies. Insect crop pollinators can either be from natural areas adjacent to orchards, or they can be brought into orchards by beekeepers that manage them. Pollination by wild pollinators is an ecosystem service, while managed pollinators (mostly honeybees) is a humanly managed service, considered not to be related to the ecosystem. Ecosystem services and their economic value have often been used as an incentive for conservation, although it is sometimes difficult to characterise and quantify them. Wild and managed pollinators have been reported to be threatened in several regions around the world, and there is concern about the effect a pollination deficit may have on crop production. Different crops and cultivars have different levels of dependence on insect pollination due to a combination of biological, physical and management factors. In this study, the pollination dependence of the Granny Smith apple cultivar and the respective contributions of wild and managed pollinators are investigated in the Western Cape province of South Africa. Granny Smith apples show a significant increase in production with insect pollination (wild and managed). Managed honeybees are more abundant in orchards than wild honeybees, and also provide a better pollination service. This difference between the pollination service of wild and managed honeybees are specifically noted in the quality, where managed honeybees pollination result in significantly more seeds per fruit and consequently produce a better shaped apple. The study goes further by quantifying the ecosystem services to the managed honeybee industry through a questionnaire completed by beekeepers. It was found that 49% of the managed hives in the Western Cape rely to some extent on natural vegetation as a forage source. Furthermore 18% of honey produced is also from natural vegetation and the wild honeybee population replenish managed honeybee stocks if they become depleted. Although managed honeybees are not usually considered an ecosystem service, it is clear that they are still linked to the ecosystem via these pathways. It is thus obvious that all pollination sources are linked to the environment, not just wild pollinators. A further economic valuation of the ecosystem service studied, and to the argument for conservation of pollinators and the resources they depend on. / AFRIKAANSE OPSOMMING: Insek bestuiwing speel ‘n belangrike rol in die produksie van gewasse in landbou wêreldwyd. Gewasse wat bestuiwing-afhanklik is, dra by tot ‘n gesonde verskeidenheid in die mens se dieët en hul hoë mark waarde is voordelig vir plaaslike en streeks ekonomieë. Insek bestuiwers kan of van natuurlike areas langs boorde afkomstig wees, of bestuurde bestuiwers kan deur byeboere in boorde ingebring word. Bestuiwing deur wilde bestuiwers is ‘n ekosisteem diens, maar die byeboere verskaf ‘n bestuurde diens, wat nie altyd gereken word om aan die ekosisteem verwant te wees nie. Ekosisteem dienste en hul ekonomiese waarde word gereeld gebruik as insentief vir bewaring, alhoewel dit soms moeilik is om dit te karaktariseer en te kwantifiseer. In sekere streke wêreldwyd is dit bewys dat wilde, asook bestuurde bestuiwers, bedreig is en daar heers bekommernis dat ‘n tekort aan bestuiwers gewas produksie negatief sal beïnvloed. Verskillende gewasse en kultivars het verskillende vlakke van bestuiwing-afhanklikheid as gevolg van verskillende biologiese en fisiese faktore en bestuurspraktyke. In hierdie studie is die bestuiwings-afhanklikheid van die Granny Smith appel kultivar ondersoek, asook die bydrae van wilde en bestuurde heuningbye in die Wes-Kaap provinsie van Suid Afrika. Granny Smith appels toon ‘n betekenisvolle produksie verbetering met insek bestuiwing (wilde en bestuurde bye). Daar is ‘n groter hoeveelheid bestuurde bye in ‘n boord as wilde bye, en hulle verskaf ook dus ‘n beter bestuiwingsdiens. Die voordeel van bestuurde bye bo wilde bye word veral in vrug kwaliteit opgemerk. As bestuurde bye gebruik word, is daar betekenisvol meer sade per vrug en gevolglik het die appels ook ‘n beter vorm. Verder fokus die studie ook op die kwantifisering van ekosisteem dienste wat aan die bestuurde heuningby industrie verskaf word, deur inligting van byeboere te gebruik. Daar is bevind dat 49% van die kolonies bestuurde bye in die Wes- Kaap is tot ‘n mate afhanklik van natuurlike plantegroei vir voedsel. Verder is 18% van die geproduseerde heuning ook afkomstig van natuurlike plantegroei se nektar en byeboere vang wilde kolonies om uitgestorwe bestuurde kolonies te vervang. Dit is dus duidelik dat alle bestuiwings bronne gekoppel is aan die omgewing, nie slegs wilde bestuiwers nie. ‘n Verdere ekonomiese waardasie van die onderskeie ekosisteem dienste wat bestudeer is, voeg motivering by tot die bewaring van bestuiwers en die hulpbronne waarvan hulle afhanklik is.

Thesis (MFor)--University of Stellenbosch, 2003. / ENGLISH ABSTRACT: The factors determining habitat selection of large herbivores, on a private wildlife reserve in semi-arid southeastern Zimbabwe, were investigated. Gross vegetative structure, herbaceous composition and topographic features thought to determine herbivore distribution were measured. Seasonal variation in resource distribution was considered, and research therefore extended over an entire year. Herbivore distribution and ecological niche separation was explained through several important environmental variables, and potential for inter-specific competition inferred. Additionally, predictive habitat suitability models were designed for each of the grazing species in the critical dry season. Herbivores showed a large degree of niche overlap in both the hotwet season and the cool-dry season, when food resources were more plentiful. Niche separation between grazers was pronounced in the hot-dry season. Herbivore distribution was associated most closely with distance to water, grass sward height, time since burn, woody plant density and by the presence of predominant grasses, these being Urochloa mossambicensis, Panicum maximum, Heteropogon contortus and Digitaria eriantha. Ecological separation of herbivores by the grasses P. maximum, H. contortus and D. eriantha was more indicative of associated environmental variables than feeding niche separation. A GIS-based analysis, using species presence data and quantitative coverages of environmental variables, produced maps of gradations of habitat suitability for grazing species during the dry season. Results of both analyses were integrated and gave a better understanding of ecological separation, and possible competitive interactions, among the large herbivore community on Malilangwe Estate. Recommendations were made based on the interpretation of findings, within the context of available management options. / AFRIKAANSE OPSOMMING: Die bepalende faktore van habitat seleksie by groot herbivore op ‘n privaat wildreservaat in semi-dorre suidoos Zimbabwe is ondersoek. Globale plantegroei stuktuur, kruidagtige samestelling en topografiese eienskappe wat glo herbivoor verspreiding bepaal, is gemeet. Seisoenale variasie in hulpbronverspreiding is in ag geneem en dus het navorsing oor ‘n hele jaar gestrek. Herbivoor verspreiding en ekologiese nisskeiding is verduidelik deur verskeie belangrike omgewingsveranderlikes en die potensiaal vir interspesifieke kompetisie is afgelei. Boonop is voorspellende habitat-geskiktheidsmodelle ontwerp vir elk van die weidingspesies in die krities droë seisoen. Herbivore toon ‘n hoë graad van nis oorvleueling in sowel die warm, nat seisoen as die koel, droë seisoen wanneer voedingsbronne meer volop is. Nis verdeling tussen weidiere was duidelik herkenbaar in die warm, droë seisoen. Herbivoor verspreiding is meestal geassosieer met die afstand na die water, die grasveld hoogte, tydperk sedert ‘n brand, digtheid van houtagtige plantsoorte en met die teenwoordigheid van die oorheersende grasse, Urochloa mossambicensis, Panicum maximum, Heteropogon contortus en Digitaria eriantha. Die ekologiese skeiding van herbivore deur die grasse P. maximum, H. contortus en D. eriantha het meer gedui op geassosieerde omgewingsveranderlikes as op skeiding van voedingsnisse. ‘n GIS-gebaseerde analise wat spesie-teenwoordigheidsdata en kwantitatiewe dekking van omgewingsveranderlikes gebruik, het klassifikasiekaarte geproduseer van habitatgeskiktheid vir weidiere tydens die droë seisoen. Resultate van beide analises is geïntegreer en het ‘n beter begrip van ekologiese skeiding en moontlike kompeterende interaksies tussen die groot herbivore gemeenskap op Malilangwe Estate tot gevolg gehad. Aanbevelings is gemaak, gebaseer op die interpretasie van bevindinge, binne die konteks van beskikbare bestuursopsies.

A combination of habitat loss, degradation and fragmentation are causing declines in butterfly species across Europe, with habitat specialists more vulnerable than generalists. The influence of climate change is serving to complicate matters, particularly at the edge of geographic ranges. Improving the quality of habitats is a key tool for the conservation of threatened species at both a local and landscape scale and this requires a thorough understanding of the ecology and habitat requirements of species. From this perspective this thesis examines and compares the ecology of two closely butterfly species, Polyommatus bellargus (the Adonis Blue) and Polyommatus coridon (the Chalkhill Blue) in southern England; calcareous grassland specialists, found in a highly fragmented ecosystem at the northern most edge of their geographic range. Chapter 2 explores whether there has been an expansion in the larval niche of P. bellargus due to a warming climate in recent decades, and finds no indication of change once concurrent local habitat change has been accounted for. Chapter 3 examines the role that differences in microhabitat requirements play in differentiating the larval niche of P. bellargus and P. coridon, showing P. coridon has broader microhabitat requirements. Chapter 4 experimentally examines the specificity of mutualistic interactions between the larvae of each butterfly species with the ants Myrmica sabuleti and Lasius niger. Chapter 5 uses microsatellites to explore the genetic structure of both P. bellargus and P. coridon, showing (as predicted) that P. coridon has a less fragmented population structure than P. bellargus, but both species have high levels of inbreeding.

The Bachman’s sparrow (Peucaea aestivalis) is a ground-dwelling, pine-obligate species experiencing range-wide population declines due to land development and fire exclusion. We explored the effects of fire seasonality on wintering Bachman’s sparrow abundance in Southern Mississippi from 2021-2022. We used generalized linear mixed models to investigate differences in sparrow abundance and vegetation characteristics following dormant and growing season fire. We explored the effects of growing season fire on breeding territory vegetation characteristics. Our results indicate that burn type (dormant vs. growing season), native grass groundcover, and shrubs over 1m were the most significant predictors for wintering Bachman’s sparrow abundance. Additionally, native grass groundcover increased in growing season breeding territories post-fire while grass standing crop and shrubs over 1m decreased. We recommend a combination of dormant and growing season fire when feasible to promote a matrix of conditions suitable for Bachman’s sparrows throughout their life cycle in the Southeastern United States.

Thesis (MScConsEcol (Conservation Ecology and Entomology))--Stellenbosch University, 2008. / The great pressures on freshwaters require their conservationists and managers to develop methods to rapidly and accurately assess their condition. Dragonflies are excellent indicators of habitat integrity and are effective organisms for this purpose. However, assessment must be done at the correct spatial scale. My aim here is to optimize the spatial resolution at which species are mapped, using three different concepts and methods in freshwater invertebrate distribution mapping, with special emphasis on IUCN Red Listing. The first is the extent of occurrence (EOO) concept, using the minimum convex polygon, and the second, the area of occupancy (AOO) concept, using IUCN and quaternary catchments. The third approach uses a river layer to compare the suitability of grids as opposed to catchments in mapping. In this study I found that area estimation based on minimum convex polygons should not be encouraged for aquatic organisms. This study also suggests that the IUCN concept of area of occupancy (AOO) should be redefined simply as occurrence, referring to known point-locality presences only and, if future data allow, to known absences. The IUCN extent of occurrence (EOO), for aquatic species, should be defined as ‘the sum of the smallest hydrological units identified of presently known, inferred or projected occurrences of a taxon, excluding cases of vagrancy, that are used to estimate the threat to a taxon’. A single hydrological unit is also the conservation or management unit. Currently, that unit is the quaternary catchment. Dragonflies have excellent potential as indicators of habitat integrity. For this purpose, my aim was to develop the Dragonfly Biotic Index (DBI) for South Africa and compare the DBI to another index, the Average Taxonomic Distinctness Index (AvTD), which was believed to have potential in assessments. The DBI and AvTD are correlated, which suggests that they could be used on a complementary basis to prioritize sites. The DBI is a low-cost, easy-to-use method and is already used for measuring habitat recovery. It has great potential for environmental assessment and monitoring freshwater biodiversity, especially as a complement to freshwater quality assessments that use macroinvertebrate scores. I thus recommend its integration into freshwater management and conservation schemes.

Thesis (MScConEcol)--UnStellenbosch University, 2011. / ENGLISH ABSTRACT: The privilege of utilising resources from the globe's marine ecosystems is threatened. Adequate regional and global conservation efforts are vital. Understanding species' distributions and the environmental variables influencing community structures are important for instigating optimum conservation plans. A major threat facing marine ecosystems is the introduction and proliferation of alien invasive species. The distribution and geographical expansion of marine alien invasive species, along with environmental variables driving their increase is also critical for drawing up conservation plans. In response to this point, this study addresses gaps in our knowledge regarding intertidal marine invertebrate species distributions particularly that of marine alien species in the Kogelberg Biosphere Reserve (KBR) and adjacent Betty's Bay Marine Protected Area (MPA) in the Western Cape of South Africa, a prime area for south-coast marine conservation. Species identifications were done in September 2010. Two marine alien invertebrate species were identified along the coastline. These were the invasive mytilid Mediterranean mussel Mytilus galloprovincialis and the bryozoan Watersipora subtorquata. A quantitative systematic survey of the intertidal region, consisting of seven rocky shore sites was then undertaken from October 2010 to December 2010. The abundance of all focal marine invertebrate species, within six selected habitat types was assessed. Environmental variables were also recorded. Statistical tests were done to investigate for significant interaction in mean abundance and mean species richness among intertidal zones and protection status (MPA and non-MPA), and among intertidal sampling units (SU‟s) and protection status. There was also investigated for significant difference in mean abundance and mean species richness across intertidal zones and habitat types where protection status was not taken into account, and to test for significant differences in mean abundance and mean species richness between the intertidal zones and habitat types. Correspondence analyses were used to illustrate relationships between species composition and the defined environmental variables. Tests were done to investigate for significant differences in mean abundance of the identified marine alien species between the MPA and non-MPA, study sites, SU's, and wave exposures. These results indicated that vertical and horizontal stress gradients along the shore mainly influence abundance and species richness. The significantly higher abundance of M. galloprovincialis outside the MPA is due to its preference for wave-exposed areas. The reason for the difference in the total abundance of W. subtorquata in the different habitats is not clear, although it appears that the higher abundance of this species in the MPA is because the sheltered nature of the MPA. M. galloprovincilais displaces indigenous species. W. subtorquata does not cause any significant harm along the coast of South Africa. This study indicates that the abundance of M. galloprovincialis and W. subtorquata in the MPA is relatively low. The MPA is therefore in good condition with regards to intertidal alien species. It is important that the MPA and adjacent KBR's coastline maintain its current pristine status. / AFRIKAANSE OPSOMMING: Die voorreg om mariene hulpbronne te benut, word bedreig. Voldoende nasionale en globale mariene bewaring is krities. 'n Deeglike kennis van spesies verspreiding en omgewingsveranderlikes wat gemeenskapstrukture beïnvloed is noodsaaklik vir optimale bewaringspogings. Mariene indringerspesies en verspreiding van indringerspesies bedreig mariene ekosisteme. Dit is belangrik om basiese kennis in te win oor die geografiese verspreiding van indringerspesies saam met die omgewingsveranderlikes wat hierdie verspreiding beïnvloed. Hierdie studie fokus dus daarop om die kennis met betrekking tot intergety ongewerwelde spesiesverspreiding, veral dié wat uitheems is langs die kus van die Kogelberg Biosfeer Reservaat (KBR) en aangrensende Bettys Baai Mariene Beskermde Gebied (MBG) in die Wes-Kaap in Suid-Afrika uit te brei. Hierdie streek word beskou as gesog vir mariene bewaring in Suid-Afrika. Identifikasie van spesies is in September 2010 gedoen. Twee intergety uitheemse ongewerwelde spesies is langs die kus geïdentifiseer; die indringer 'mytilid' Mediterreense mossel - Mytilus galloprovincialis en die 'bryozoa' Watersipora subtorquata. 'n Kwantitatiewe sistematiese oorsig van die intergety rotsagtige streek, bestaande uit sewe lokaliteite, is gedoen. Steekproefneming is vanaf Oktober 2010 tot Desember 2010 uitgevoer. Alle fokale intergety ongewerwelde spesies, in ses geselekteerde habitattipes is getel. Omgewingsveranderlikes is aangeteken. Daar is statisties getoets vir verskille in die talrykheid en spesiesrykheid tussen die intergety zones en beskermingsstatus (MBG en nie-MBG), en tussen die intergety habitattipes en beskermingsstatus. Daar is ook getoets vir verskille in talrykheid en spesiesrykheid tussen die intergety zones en habitattipes waar beskermingsstatus nie in ag geneem is nie. Ooreenstemmende analises is gedoen om die verhoudings tussen die spesiesamestelling en die gedefinieerde omgewingsveranderlikes te illustreer. Daar is statisties getoets vir verskille in die talrykheid van die geïdentifiseerde uitheemse spesies tussen die MBG en nie-MBG, die verskillende lokaliteite, die verskillende habitattipes en tussen die verskillende golf blootstellings. Hierdie studie dui aan dat vertikale en horisontale stresgradiënte die hoofoorsaak is wat talrykheid en spesiesrykheid beïnvloed. Die aansienlik hoër talrykheid van M. galloprovincialis buite die MBG is van die gebied se hoër golfblootstelling. Die beduidende verskil in talrykheid van W. subtorquata is onduidelik. Dit kan egter afgelei word dat die beskutte aard van die MBG 'n rol speel by die aansienlik hoër talrykheid van hierdie spesie binne die MBG. M. galloprovicialis verplaas inheemse spesies. Geen beskikbare bewys dui daarop dat W. subtorquata enige beduidende skade langs die kus van Suid-Afrika aanrig nie. Die lae talrykheid van beide hierdie spesies binne die MBG dui daarop dat hierdie unieke area steeds in goeie toestand ten opsigte van intergety uitheemse spesies is. Dit is noodsaaklik dat die huidige status van die MBG en aangrensende kuslyn gehandhaaf word.

Thesis (MScAgric)--Stellenbosch University, 2012. / ENGLISH ABSTRACT: The grain chinch bug, Macchiademus diplopterus, is an endemic pest of cultivated grain crops and wild grasses in the south-western Cape region of South Africa. In early summer when host plants dry out, adult grain chinch bugs aggregate in large numbers in shelter sites in surrounding areas and enter into aestivation. These shelter sites sometimes include the stalk or calyx ends of fruit, and shelter-seeking bugs can also contaminate export fruit cartons, consequently posing a phytosanitary/quarantine risk to importing countries. Presently, there are no feasible pre- or post-harvest control measures to manage this quarantine risk. The aggregating behaviour of grain chinch bugs suggests the involvement of pheromones. Therefore, investigating the chemical ecology of grain chinch bugs for potential use in control measures is the focus of the first research chapter of this study. Gas chromatography-mass spectrometry (GC-MS) was used to identify headspace volatiles collected from aggregating bugs. Olfactometer bioassays were conducted to assess the attractiveness of each gender to separate sexes, individual compounds and a mixture of the compounds as a formulated lure. The lure was tested in field trapping trials with delta and bucket traps. In the bioassays with the live insects the response of each gender to live females was greater than the responses of each gender to live males, suggesting that females may disseminate the pheromones more efficiently than males. The following eight volatile compounds were indentified from the GC-MS analysis: hexanal, (E)-2-hexenal, (E)-2-hexenol, (E)-2-hexenyl acetate, (E)-2-octenal, (E)-2-octenol, (E)-2-octenyl acetate and tridecane. In the bioassays with individual compounds, three of these eight compounds, hexanal, (E)-2-hexenal, and tridecane, elicited attraction of both females and males. The formulated lure was attractive to both males and females in the laboratory bioassay, but this attraction was not evident in the field. In the field, there was only one occasion when a significantly higher number of bugs were caught in baited traps compared to unbaited traps. Trap catches were very low compared to the actual level of infestation in the field which was evident from corrugated cardboard bands tied around tree trunks which contained many sheltering bugs. The low trap catches seen in the field were partly due to competition between the synthetic pheromone lure and the natural pheromones emitted by aggregating live insects. Also, the characteristic shelter-seeking behaviour of grain chinch bugs influenced trap catches, as more bugs were found in places that provide shelter, like cardboard bands and walls of the delta traps. This behavior of aestivating bugs could be used to the advantage of trapping bugs by integrating sheltering sites into traps in future trials. Also, the lure needs to be improved for optimum efficiency in the field. The second research chapter also addresses the quarantine risk posed by grain chinch bugs, by investigating the thermal biology of bugs to ultimately facilitate the development of effective post-harvest treatments. Critical thermal minimum and maximum temperatures (CTmin and CTmax) of both active and aestivating bugs were subjected to critical thermal limits analysis. The CTmin and CTmax of aestivating bugs were not affected by gender (p > 0.05). There was a decrease in CTmin from the active period into aestivation for both males (2.8°C to 1.0°C (± 0.1)) and females (2.1°C to 0.6°C (± 0.1)). Also, for CTmax there was an increase in tolerance from the active period into the aestivation period for both males (49.9°C to 51.0°C (± 0.1)) and females (49.9°C to 51.5°C (± 0.1)). To determine the plasticity of grain chinch bug thermal tolerance, aestivating bugs at 27 weeks into aestivation, were acclimated at different temperatures and photoperiods [18°C (10L:14D) and 26°C (16L:8D)] for a period of seven days. Both low (18°C) and high (26°C) acclimation temperatures and photoperiods increased CTmin of aestivating grain chinch bugs at 14 weeks from 0.8°C to -1.2°C and -0.1°C (± 0.1) respectively. However, CTmax was not altered by acclimation temperatures (p > 0.82). Field temperatures at collection sites were recorded to compare to grain chinch bugs thermal tolerance levels exhibited in the laboratory. These results, as well as the effects of acclimation treatments on the CTmin of bugs, have implications for post-harvest treatments, and understanding the quarantine risk posed to importing countries. The information generated from this study can be used to further advance the development of both effective pre-harvest and post-harvest control measures to reduce grain chinch bug quarantine risk. / AFRIKAANSE OPSOMMING: Die graanstinkluis, Macchiademus diplopterus, is 'n endemiese plaag van aangeplante graangewasse en wilde grasse in die Suidwes Kaap-provinsie van Suid-Afrika. In die vroeë somer wanneer gasheerplante uitdroog, soek groot getalle volwasse graanstinkluise skuiling in die omliggende gebiede en gaan in ʼn somerrusperiode. Hierdie skuilplekke sluit soms die stam of kelk eindes van vrugte in en graanstinkluise kan ook uitvoer-vrugte kartonne kontamineer. Gevolglik word lande wat vrugte uit Suid-Afrika invoer, aan die fitosanitêre kwarantynrisiko van stinkluisbesmetting blootgestel. Tans is daar nie haalbare voor- of na-oes beheermaatreëls om hierdie kwarantyn risiko te bestuur nie. Die aggregasiegedrag van graanstinkluise dui op die betrokkenheid van ʼn feromoon. ‘n Ondersoek van die chemiese ekologie van die graanstinkluis vir moontlike gebruik in beheermaatreëls is die fokus van die eerste gedeelte van hierdie studie. Gaschromatografie-massaspektrometrie (GC-MS) is gebruik om die vlugtige organiese verbindings in die bodamp van die saamgetrosde stinkluise te identifiseer. Olfaktometriese biotoetse is uitgevoer om die aantreklikheid van die insekte vir die teenoorgestelde geslag te bepaal, asook van die individuele verbindings en 'n mengsel van die verbindings as 'n geformuleerde lokmiddel in lokvalle. Die lokmiddel is getoets in veldproewe met deltatipe en emmertipe lokvalle. In die olfaktometriese biotoetse met die lewende insekte is die reaksie van beide geslagte teenoor lewende wyfies groter as die reaksie van die geslagte teenoor mannetjies, wat daarop dui dat wyfies die feromoon meer doeltreffend as mannetjies versprei. Die volgende agt verbindings is geïdentifiseer met behulp van GC-MS-analise: heksanaal, (E)-2-heksenaal, (E)-2-heksenol, (E)-2-heksenielasetaat, (E)-2-oktenaal, (E)-2-oktenol, (E)-2-oktenielasetaat en tridekaan. In die biotoetse met individuele verbindings het drie van die agt verbindings, hexanal, (E)-2-hexenal, en tridecane, lokaktiwiteit vir beide geslagte getoon. Die geformuleerde lokmiddel was aantreklik vir beide geslagte in laboratorium toetse, maar soortgelyke lok is nie in die veld gevind nie, waar daar net een keer 'n aansienlike groter getal graanstinkluise met lokmiddel gevang is in vergelyking met lokvalle sonder lokmiddel. Die getal graanstinkluise in lokvalle was baie laag in vergelyking met die werklike vlak van besmetting in die veld, wat duidelik geblyk het uit die getalle graanstinkluise wat skuiling gesoek het in die geriffelde karton bande wat om boomstamme vasgemaak was. Die lae lokvalvangste in die veld was deels te wyte aan die kompetisie tussen sintetiese feromoon en die natuurlike feromoon van saamgetrosde insekte. Die kenmerkende aggregasiegedrag van graanstinkluise het lokvalvangste beïnvloed, aangesien meer stinkluise gevind is in plekke wat skuiling bied, soos die kartonbande en die binnekant van die delta-lokvalle. Hierdie skuilings van graanstinkluise kan in toekomstige proewe uitgebuit word deur vir meer skuilplek in lokvalle voorsiening te maak. Die formulering en die aanbieding van die lokmiddle moet ook verbeter word vir 'n optimale doeltreffendheid in die veld. In die tweede hoofstuk word die kwarantynrisiko van die graanstinkluis aangespreek deur die ondersoek van die termiese biologie van stinkluise om uiteindelik die ontwikkeling van doeltreffende na-oes behandelings te fasiliteer. Kritiese termiese minimum en maksimum temperature (CTmin en CTmax) van beide aktiewe en rustende graanstinkluise is bepaal deur analise van die kritiese termiese beperkings van die insek. Die CTmin en CTmax van rustende graanstinkluise is nie geraak deur geslag nie (p > 0.05). Daar was 'n afname in CTmin van die aktiewe tydperk tot in rus, vir beide manlike (2.8°C tot 1.0°C (± 0.1)) en vroulike insekte (2.1°C tot 0.6°C (± 0.1)). Ook vir die CTmax was daar 'n verbetering in toleransie vanaf die aktiewe tydperk tot in die rusperiode vir beide manlike (49.9°C tot 51.0°C (± 0.1)) en vroulike insekte (49.9°C tot 51.5°C (± 0.1)). Om die aanpasbaarheid van die termiese toleransie van die graanstinkluis te bepaal, is graanstinkluise 27 weke na aanvang van die rusperiode geakklimatiseer by verskillende temperature en fotoperiodes [18°C (10L: 14D) en 26°C (16L: 8D)] vir 'n tydperk van sewe dae. Beide lae (18°C) en hoë (26°C) akklimatiseringstemperature en fotoperiodes het onderskeidelik die CTmin van rustende graanstinkluise op 14 weke verhoog van 0.8°C tot -1.2°C en -0.1°C (± 0.1). Daar is egter geen effek op CTmax deur akklimasie temperature nie (p > 0.82). Veldtemperature is ook bepaal om te vergelyk met graanstinkluis termiese toleransie vlakke wat in die laboratorium bepaal is. Hierdie resultate, sowel as die gevolge van die akklimasie behandelings op die CTmin van graanstinkluise, het implikasies vir na-oes behandelings, en begrip van die kwarantyngevaar wat dit inhou vir vrugte-invoerlande. Die inligting wat uit hierdie studie voortvloei, kan gebruik word om die ontwikkeling van beide effektiewe voor-oes en na-oes beheermaatreëls te bevorder en om die kwarantynrisiko wat graanstinkluise inhou, te verminder.

Thesis (MScConsEcol (Conservation Ecology and Entomology))--University of Stellenbosch, 2009. / ENGLISH ABSTRACT: Pseudococcus viburni (Signoret) (Hemiptera: Pseudococcidae) (obscure mealybug), is a common and serious pest of apples and pears in South Africa. Consumer and regulatory pressure to produce commodities under sustainable and ecologically compatible conditions has rendered chemical control options increasingly limited. Information on the seasonal occurrence of pests is but one of the vital components of an effective and sustainable integrated pest management system needed for planning the initiation of monitoring and determining when damage can be expected. It is also important to identify which orchards are at risk of developing mealybug infestations while development of effective and early monitoring tools for mealybug populations will help growers in making decisions with regards to pest management and crop suitability for various markets. It is also essential to determine the presence and efficacy of naturally occurring biological control agents in orchards so as to ascertain the potential of biological control as a viable alternative in orchards. However, under the current integrated pest management protocol, it has been difficult to determine this, due to the sporadic and relatively low incidence of mealybug infestations in some orchards, or by simply relying on naturally occurring field populations of biocontrol agents. Knowledge of the environmental conditions under which P. viburni population levels may become destructive is also essential for timing the release of insectary reared natural enemies as well as understanding the population ecology of this pest and its natural enemies. Information was gathered regarding the seasonal phenology of P. viburni and its natural enemies in pome fruit orchards in the Western Cape Province during the 2007/08 and 2008/09 growing seasons. Seasonal population studies showed that P. viburni has multiple overlapping generations with all life stages present throughout the year. The highest orchard infestations occurred during the summer period until early winter (January to early June). This was followed by a decrease in population from late June to November, before another increase in December. Presence-absence sampling of mealybugs on the host plant revealed that woody parts of the tree, such as the trunk and old stems were the most preferred sites for mealybug habitation, due to the availability of protected refuge sites. Migration of mealybug populations to newer growth and the upper sections of the tree crown, such as the new stems, leaves and eventually the fruit, was observed from December throughout the summer period until the early winter in June. Fruit colonization in both apples and pears commenced in January, when the fruit had developed a size sufficient for P. viburni to penetrate and occupy spaces such as the fruit core, calyx and stem end. There was no evidence of P. viburni occurring beneath the soil surface or on the roots of host trees. Two natural enemies of mealybugs, namely Pseudaphycus maculipennis (Mercet) and Coccidoxenoides perminutus (Girault), were found to be active in apple and pear orchards in the Western Cape. However, the status of C. perminutus as a parasite of P. viburni still needs to be verified despite evidence of emergence from P. viburni mummies, which was not sufficient enough to suggest that it is a useful biological control agent. Seasonal abundance trends of the two natural enemies revealed that their lifecycle is synchronized with that of the host. However, there was no evidence of P. maculipennis activity in Ceres. No predators were found during the course of this study. The rate of P. viburni parasitism at harvest was 46.52%, with P. maculipennis and C. perminutus constituting 98.966% and 1.034% of the parasitoids recovered from mealybug mummies, respectively. Studies on the use of pheromone traps as early monitoring tools for P. viburni showed that there was a positive and significant relationship between the fruit infestation and number of P. viburni adult males caught in pheromone-baited traps (r2 = 0.454). The action threshold level was estimated to be 2.5 male P. viburni caught per trap per fortnight at an economic threshold of 2% fruit infestation. / AFRIKAANSE OPSOMMING: Pseudococcus viburni (Signoret) (Hemiptera: Pseudococcidae) (ligrooswitluis), is ‘n algemene en ernstige plaag van appels en pere in Suid-Afrika. Druk deur verbruikers en regulasies om kommoditeite onder volhoubare en ekologies verenigbare toestande te produseer het chemiese beheeropsies toenemend beperk. Inligting oor die seisoenale voorkoms van plae is een van die essensiële komponente van ‘n effektiewe en volhoubare geïntegreerde plaagbestuurprogram. Dit is in die aanvanklike beplanning van monitering en om te bepaal wanneer skade verwag kan word. Dit is ook belangrik om boorde vroegtydig te identifiseer wat die risiko het om witluisbesmettings te ontwikkel. Die ontwikkeling van effektiewe en vroeë moniteringstegnieke vir witluisbevolkings sal produsente help met besluitneming rakende plaagbestuur en die geskiktheid van gewasse vir verskeie markte. Dit is ook noodsaaklik om die teenwoordigheid en effektiwiteit van biologiese beheer agente wat natuurlik in boorde voorkom te bepaal ten einde die potensiaal van biologiese beheer as ‘n lewensvatbare alternatief vas te stel. Onder die huidige geïntegreerde plaagbestuurprotokol was dit egter moeilik om laasgenoemde te bepaal weens die sporadiese en relatiewe lae voorkoms van witluisbesmettings in sommige boorde of deur bloot staat te maak op die veldpopulasies van biologiese beheer agente wat natuurlik voorkom. Kennis van die omgewingstoestande waaronder P. viburni bevolkingsvlakke skadelik raak is ook noodsaaklik vir die beplanning van vrylating van biologiese beheer agente, asook om die bevolkingsekologie van hierdie plaag en sy natuurlike vyande te verstaan. Inligting oor die seisoenale fenologie van P. viburni en sy natuurlike vyande in sagtevrugte boorde in die Westelike Kaapprovinsie is gedurende die 2007/08 en 2008/09 groeiseisoene versamel. Seisoenale bevolkingstudies het getoon dat P. viburni verskeie oorvleuelende generasies het met alle stadia teenwoordig regdeur die jaar.