GaN has the potential to revolutionize the high power electronics industry, enabling high voltage applications and better power conversion efficiency due to its intrinsic material properties and newly available high purity bulk substrates. However, unintentional impurity incorporation needs to be reduced. This reduction can be accomplished by reducing the source of contamination and exploration of extreme growth conditions which reduce the incorporation of these contaminants. Newly available bulk substrates with low threading dislocations allow for better study of material properties, as opposed to material whose properties are dominated by structural and chemical defects. In addition, very thick films can be grown without cracking due to exact lattice and thermal expansion coefficient match. Through chemical and electrical measurements, this work aims to find growth conditions which reduces contamination without a severe impact on growth rate, which is an important factor from an industry standpoint. The proposed thicknesses of these devices are on the order of one hundred microns and requires tight control of the intentional dopants. / Doctor of Philosophy / GaN is a compound semiconductor which has the potential to revolutionize the high power electronics industry, enabling new applications and energy savings due to its inherent material properties. However, material quality and purity requires improvement. This improvement can be accomplished by reducing contamination and growing under extreme conditions. Newly available bulk substrates with low defects allow for better study of material properties. In addition, very thick films can be grown without cracking on these substrates due to exact lattice and thermal expansion coefficient match. Through chemical and electrical measurements, this work aims to find optimal growth conditions for high purity GaN without a severe impact on growth rate, which is an important factor from an industry standpoint. The proposed thicknesses of these devices are on the order of one hundred microns and requires tight control of impurities.

Meat and poultry slaughtering and processing practices have been associated with the microbial contamination with Listeria spp. Ready-to-eat poultry products have been considered as a primary agent associated with Listeria monocytogenes illness outbreaks. Developing environmental monitoring programs (EMPs) that are based on product and/or process risk level analysis is a useful approach to reduce contamination in poultry processing plants and enhance food safety. Sampling criteria that is based on product risk levels and process control in ready-to-eat poultry processing facilities was developed to allow users to design and conduct appropriate sampling plans to target Listeria spp. After developing the criteria, an internet-based environmental monitoring program ("EZSafety") was developed to allow poultry producers to enhance their sample collection and analysis of test results over time and conduct appropriate sampling plans for Listeria spp. and other microbiological indicators. The frontend of the program website was built using React Native (an open-source JavaScript library for building user interfaces). The backend of the program website was built using Node.js which executes JavaScript code outside a web browser. MongoDB was used as a document-oriented database for the website. The program was evaluated by 20 food safety professionals to assess its ability to develop appropriate sampling plans to target Listeria spp. The majority of these participants believed that EZSafety has several tools that are effective for targeting Listeria spp. and other indicators and enhancing environmental monitoring. Additionally, most participants agreed that EZSafety is organized and user-friendly. EMPs can play a significant role in improving the detection rate and the prevention of Listeria spp. and other indicators in poultry processing plants. / Master of Science in Life Sciences / Meat and poultry slaughtering and processing practices have been associated with the microbial contamination with a bacterium known as Listeria. Cooked poultry products during the manufacturing process have been considered as a primary agent associated with Listeria monocytogenes (disease causing type of bacteria) sickness outbreaks. Developing environmental monitoring plans to detect and prevent this bacterium in poultry processing establishments is a useful approach to reduce contamination and enhance food safety. Several guidelines and baselines were developed to allow users to design and conduct appropriate environmental monitoring plans to target this bacterium. After developing these guidelines and baselines, an internet-based environmental monitoring program ("EZSafety") was developed to allow poultry processors to enhance their sample collection and analysis of test results over time. The program was developed using several kinds of computer platforms (JavaScript, React Native, and MongoDB) . These open-source platforms were used to design, develop, and store the program over the internet. In order to validate its usefulness, the program was evaluated by 20 users who are majored in food safety and familiar with poultry processing plants hygiene to assess its ability to suggest appropriate monitoring plans. Most of the participants believed that EZSafety has several tools that are effective for targeting Listeria and other kinds of bacteria and enhancing environmental monitoring plans. Additionally, most participants agreed that EZSafety is organized and user-friendly. Such automated monitoring programs can play a significant role in enhancing the detection rate and the prevention of Listeria and other organisms in poultry processing facilities.

The problem of conatmination in culture media for Mycobacterium tuberculosis has not been solved completely, and for this reason the work herein presented was carried out. In this work experiments were made testing the effect of actidione in inhibiting certain ones of the higher fungi.

No / There is developing interest in the analytical use of human hair from archaeological contexts in key research areas such as DNA, trace elemental and isotopic analyses. Other human tissues, especially bone, that have been used for trace element, isotopic and DNA analyses have had extensive study concerning their diagenesis, but this has not been done for hair. Consideration must be given to the complex interaction of hair with its buried environment, thereby laying a firm basis for the use of hair in future research. Since human hair is known to survive under a diverse range of environmental conditions, a pilot study has investigated the basic processes of hair degradation, using samples from different climatic zones and burial types. Variation in the degree of preservation of archaeological hair was characterized by light microscopy, electron microscopy, and FT-Raman spectroscopy, relating morphological change of the surface and internal structure of hair to its biochemical integrity. The results demonstrate a breakdown of cortical cell boundaries and disruption of the cuticular layering, coupled with infiltration of material from the burial matrix that suggests a progressive loss of cohesion that is in part due to microbiological activity. Medullated hair is shown to be more susceptible to physical breakdown by providing two routes for microbial and environmental attack. At the molecular level the proteinaceous component undergoes alteration, and the S-S cystine linkages, responsible for the strength and resilience of hair in living individuals, are lost.

Groundwater related courses are offered through several colleges at Virginia Tech. These classes enroll a diverse group of students with varied academic backgrounds and educational levels. Though these classes emphasize different aspects of groundwater resources, they lack a unified approach in instructional materials and learning methodologies for knowledge they do share. The goals of this research are to lessen the impact of variable student backgrounds and to better integrate the courses to improve teaching and learning, through the development of a multi-tiered, interdisciplinary website, Groundwater Interactive (GWI). GWI, as an educational technology, employs a variety of interactive multimedia. The primary educational components of the website include interactive and graphical models and quizzes, and a student-authored primer. An implementation strategy based on experiential and cooperative learning models is developed for application of the GWI tool in the classroom. An assessment methodology to evaluate the effectiveness of these new learning methods and techniques was also developed, but was not implemented as part of this work. / Master of Science

The purpose of this research was to evaluate the rates, patterns, and pathways involved in the biodegradation of organic contaminants in subsurface environments. Subsurface material was obtained from ten sites in six geographical locations representing diverse environmental conditions. The overall goal was to gain a general understanding of biodegradative mechanisms rather than making site-specific measurements. The biodegradation rates of methanol, phenol, and <i>t</i>-butanol (TBA) were evaluated in static soil/water microcosms. Biodegradation assays were conducted under ambient anoxic conditions, and with the addition of potential electron acceptors (nitrate, nitrite, sulfate) or metabolic inhibitors (molybdate, BESA) to promote different pathways of anaerobic microbial metabolism (nitrate respiration/denitrification, sulfate reduction, or methanogenesis). In unamended systems, biodegradation rates varied considerably between sites. Methanol and phenol were degraded fairly readily. Rates generally ranged from 0.5 to 1.0 mgL⁻¹d⁻¹ for 20°C incubation. Disappearance of methanol and phenol followed zero- to first-order kinetics and was usually immediate, requiring no acclimation period. TBA was relatively recalcitrant in subsurface soils, disappearing at a rate of 0.1-0.3 mgL⁻¹d⁻¹ (20°C). No biodegradation was evident, relative to sterile controls, in certain soils. The pattern of TBA degradation was typically biphasic: a long lag period of slow, linear removal was followed by an abrupt increase in removal rate (albeit still slow). Biodegradation rates were positively correlated with bacterial density for 12 soil samples from 3 sites within a localized area at Blacksburg, Virginia. However, this relationship did not exist between soils from diverse locations. The prevailing electron acceptor conditions govern the catabolic pathways utilized in the anaerobic respiration of organic contaminants. The effects of the added electron acceptors and inhibitors on biodegradation rates varied between sites. Two general types of systems are indicated by relative biodegradation rates, characteristic responses to electron acceptor/inhibitor amendments, and general environmental conditions. "Fast" soils are characterized by a higher flux of water and nutrients, higher biodegradation rates, and rate enhancement upon adding nitrate or sulfate. In "slow" soils, organic contaminants are degraded at lower rates, rates are decreased by adding nitrate, sulfate, or BESA (which inhibits methanogenesis), and rates are increased by adding molybdate (which inhibits sulfate reduction). Nearly all soils tested were capable of sulfate-reducing and methanogenic metabolism, but those populations were more active, and competition between the two groups was less severe, in "fast" soils. In contrast, "fast" soils appeared to harbor an active population of nitrate respiring/denitrifying bacteria, whereas in "slow" soils that metabolic group was inactive, absent, or susceptible to nitrite toxicity. / Ph. D.

Groundwater contaminated by organic chemicals from industrial spills, leaking underground gasoline storage tanks and landfills has caused concern about the future of a major source of drinking water. Compounds from industrial sources such as alcohols and phenols are frequently found as groundwater contaminants. These compounds are highly soluble in water and do not adsorb well to aquifer material. They also have the potential to migrate in the subsurface system achieving significant levels in drinking water supplies. In addition, they can serve as carriers for carcinogenic compounds such as benzene, toluene and xylene which are relatively insoluble in water, but are quite soluble in alcohol. A potential alternative to expensive groundwater reclamation projects is the use of the natural soil bacteria to degrade organic contaminants. Very little is known, however, about subsurface soil bacteria to man-made organic chemicals or the degradation rates of these compounds. Such information would be useful in planning cleanup or protection strategies for groundwater systems. This study was designed to measure the kinetic response of tertiary butyl alcohol (TBA), determine the biological degradation rates of methanol, ethanol, propanol, l-butanol, TBA, pentanol, phenol and 2,4-dichlorophenol; describe site specific conditions which enhance or inhibit degradation and compare biodegradation rates with thermodynamic predictions. Laboratory microcosms utilizing soil from two previously uncontaminated sites of widely varying conditions were constructed to simulate the subsurface environment. Nitrate was added to some microcosms to stimulate denitrification and metabolic inhibitors were added to others to define conditions at each site which favor biodegradation. Each of the test compounds except TBA was readily degraded in the Blacksburg soil. Inhibition of sulfate reduction by the addition of molybdate stimulated degradation of all compounds including TBA, whereas, inhibition of methanogenesis with BESA slowed the degradation rates. The addition of nitrate did not affect the biodegradation in Blacksburg soil. In the Newport News soil, all of the test compounds were biodegraded at substantially higher rates than was observed in the Blacksburg soil. The presence of the metabolic inhibitors did not affect degradation, however, the addition of nitrate increased the degradation rates of the alcohols but not the phenols. The degradation rates in each of the soils did not correlate with the bacterial population size or free energies of the reactions. / Ph. D.

Thèse ou mémoire avec insertion d'articles. / Titre de l'écran-titre (visionné le 23 octobre 2023) / Le norovirus humain (HuNoV) et le virus de l'hépatite A (VHA) ont été détectés plusieurs fois dans les petits fruits, tandis que le HuNoV, le VHA et le virus de l'hépatite E (VHE) ont été associés à des épisodes de contamination des huîtres et des moules dans les dernières années. Ces virus sont principalement transmis par la voie féco-orale, mais le VHE peut également être transmis par voie zoonotique. Le HuNoV et le VHA peuvent contaminer les aliments via l'eau, notamment lors de l'irrigation avec de l'eau contaminée ou en cas de déversement dans les zones de production. De plus, le VHE peut être transmis aux aliments par les fèces d'animaux contaminés. Cependant, les connaissances sur la contamination des aliments cultivés au Québec par ces virus sont limitées. Le but de ce projet était d'évaluer la contamination des canneberges par le HuNoV et le VHA ainsi que celle des huîtres par le HuNoV, le VHA et le VHE, entre deux zones de production. Pour ce faire, 234 échantillons de canneberges ont été récoltés chez 44 producteurs québécois et 260 huîtres ont été prélevées près de la côte, et 260 huîtres au large de la côte des Îles-de-la-Madeleine, chaque échantillon étant représenté par 10 huîtres. L'ARN viral a été détecté et quantifié par détection moléculaire, en respectant la méthodologie de la méthode ISO 15216-1 : 2017. Parmi les 234 échantillons de canneberges testés, seulement trois étaient positifs au HuNoV GI (1,28 %). Aucun des 52 échantillons d'huîtres n'a été considéré comme positif pour le HuNoV, le VHA ou le VHE. Ces résultats suggèrent que le risque de contamination par des canneberges et des huîtres cultivées au Québec est faible et que la contamination des huîtres près de la côte n'est pas significativement différente de celle des huîtres au large de la côte. / Human norovirus (HuNoV), hepatitis A virus (HAV) and hepatitis E virus (HEV) have been the cause of many global epidemics, such as those caused by HuNoV and HAV in berries or even HuNoV, HAV and HEV in shellfish in recent years. These viruses are primarily transmitted through the fecal-oral route, although HEV can also be transmitted through zoonotic routes. HuNoV and HAV can contaminate food through water, especially during irrigation with contaminated water when spilled in production areas. In addition, HEV can be transmitted to food through contaminated water but also when in contact with contaminated animal feces. However, limited information is available on the contamination of food grown in Quebec by these foodborne viruses. The objective of this project was to evaluate the levels of HuNoV and HAV contamination in cranberries, as well as levels of HuNoV, HAV and HEV contamination in oysters, between two production areas. For this purpose, 234 cranberry samples were collected from 44 Quebec producers. As for molluscs, 260 oysters were obtained near the coast and 260 oysters were collected offshore of Magdalen Islands, each sample consisting of 10 oysters. The presence of viral RNA was detected and quantified using molecular detection methods in accordance with ISO 15216-1:2017. Among the 234 cranberry samples tested, only three were positive for HuNoV GI (1.28%). None of the 52 oyster samples were found to be positive for HuNoV, HAV or HEV. These findings suggest that the risk of contamination of cranberries and oysters cultivated in Quebec is low, and that there is no significant difference in contamination between oysters near the coast and those offshore in this project.

京都大学 / 新制・課程博士 / 博士(地球環境学) / 甲第24955号 / 地環博第246号 / 新制||地環||49(附属図書館) / 京都大学大学院地球環境学舎環境マネジメント専攻 / (主査)教授 勝見 武, 准教授 高井 敦史, 教授 越後 信哉 / 学位規則第4条第1項該当 / Doctor of Global Environmental Studies / Kyoto University / DFAM

Depuis la préhistoire, plusieurs matériaux ont été utilisés pour fabriquer des instruments et des appareils de santé. Au cours des dernières décennies, avec l’apparition du terme « biomatériau », les matériaux ont été conçus pour contrôler des réactions biologiques spécifiques, pour augmenter la durée de vie des biodispositifs et la qualité de vie des patients dans le monde. Cependant, indépendamment de la nature du matériau, ou au sens strict du biomatériau, et de la fonction remplie, ils sont susceptibles aux phénomènes de surface causés par son environnement. Certains phénomènes intéressants incluent l’action des protéines, des électrolytes et des cellules sur les surfaces métalliques. Ces interactions peuvent entraîner le développement de complications telles que la formation de thrombus, la corrosion et la calcification, qui affecteront le fonctionnement des dispositifs, et la contamination bactérienne qui peut transformer la surface en vecteur de propagation de maladies. Des recherches ont exploité des stratégies de modification de surface pour minimiser ou éviter ces complications. Ces approches demandent du temps et des efforts pour développer une surface efficace pour chaque cas. Sur cette base, l’objectif principal de ce travail était de concevoir et de développer des revêtements à base de chitosane à utiliser dans le revêtement de surfaces métalliques et de dispositifs utilisés dans le système de santé et de modifier ces surfaces pour moduler la réponse biologique. Pour atteindre cet objectif, le projet de recherche a été divisé en trois parties. La première était le greffage du chitosane utilisant de la dopamine comme ancre. La deuxième était le développement d’un greffage original en une étape remplaçant la dopamine par l’acide caféique. La dernière était la modification du revêtement de chitosane pour moduler la réponse biologique de la surface. À chaque étape, les surfaces revêtues ont été caractérisées par analyses biologiques et physico-chimiques. Les résultats ont démontré que la méthodologie développée produisait des revêtements de chitosane qui possédait des réponses biologiques et des performances physico-chimiques favorables et qui pouvait être modifiés pour améliorer ou conférer la propriété souhaitée. De plus, cette méthodologie permet de produire une plateforme capable d’être appliquée sur une large gamme de complications en raison de sa modulabilité. Cela représente une diminution de la consommation de temps pour créer une nouvelle surface à partir du zéro pour chaque situation. / Since prehistoric times, several materials have been used to make health instruments and devices. In recent decades, with the appearance of the term "biomaterial", materials have been designed to control specific biological reactions, to increase the lifespan of biodevices and the quality of life of patients around the world. However, regardless of the nature of the material, or in the strict sense of the biomaterial, and the function fulfilled, they are susceptible to the surface phenomena caused by its environment. These phenomena include the action of proteins, electrolytes, and cells on metal surfaces. These interactions can lead to the development of complications such as thrombus formation,corrosion, and calcification, which will affect the functioning of the devices, and bacterial contamination, which can transform the surface into a vector for the spread of disease. Researches were made on the use of surface modification strategies to minimize or avoid these complications. These approaches require time and effort to develop an effective surface for each case. On this basis, the main objective of this work was to design and develop chitosan-based coatings to coat metallic surfaces and devices used in the health care system and to modify these surfaces to modulate the biological response. To accomplish this objective, the research project was divided into three parts. The first was the grafting of chitosan using dopamine as an anchor. The second was the development of an original one step graft replacing dopamine with caffeic acid. The last was the modification of the chitosan coating to modulate the biological response of the surface. At each stage, the coated surfaces were characterized by biological and physicochemical analyzes. The results obtained showed that the developed methodology produced chitosan coatings that had favorable biological responses and physicochemical performances, and that it could be modified to improve or confer the desired property. Besides, this methodology makes it possible to produce a platform able to be applied to many complications due to its modularity. It represents a reduction in the consumption of time to create a new surface from scratch for each situation.