Thesis (Ph. D.)--University of Adelaide, Dept. of Plant Science, 1999. / Includes bibliographical references (leaves 203-212).

Durum wheat cultivars for North-Eastern Oregon have to be competitive in terms of their yield potential with soft white winter wheat cultivars and meet strict quality requirements of the milling industry. Combining the high yield potential of fall planted durum wheat cultivars which have an acceptable level of winter hardiness with the good quality characteristics of the spring types through winter by spring crosses is believed to be an appropriate strategy. However, to be efficient, quality traits of the breeding lines and the nature of their inheritance must be evaluated early in the breeding process. The primary objective of this study was to investigate the nature of genetic variability involving two main quality traits, namely gluten strength and carotenoid pigment content. These traits are measured by the SDS sedimentation test and by spectrophotometric analysis of pigment extracts, respectively. Total genetic variability involving grain yield, kernel weight and protein content was also studied. Combining ability analysis of a 4x4 diallel cross using two winter and two spring parents was performed according to Griffing's (1956) Model 1, method 1. Both additive and non additive type gene action controlled all traits studied. Non additive type gene action was particularly important for grain yield and kernel weight suggesting that selection for these traits should be delayed until later generations (F5 or F6). Protein and pigment content were controlled primarily by genes functioning in an additive manner although they are also influenced by significant non additive type gene action. Reciprocal effects were significant for pigment content suggesting that some maternal effect might be involved. The predominance of additive type gene action for sedimentation volume suggests that this trait can be used to screen early generation material (F2, F3) for gluten strength. F2 populations generated from the diallel cross were compared in terms of their genetic variances, potential transgressive segregation and were used to investigate the possible associations between the traits measured. Winter by spring crosses were usually characterized by an enhanced genetic variability for yield and gluten strength. Transgressive segregation for sedimentation volume was present in these crosses. Protein content was negatively associated with grain yield. No relationship between gluten strength and grain yield was observed. Gluten strength did not appear to be associated with total protein content of the grain. Sedimentation volume varied greatly, even in populations with low variability in protein content. Consequently, selection on the basis of sedimentation volume per se would not be result in selecting inadvertently agronomically unsuitable types. / Graduation date: 1991

Fungi contribute to key processes in the sustainable function of terrestrial ecosystems including nutrient cycling and transport of water to plants. However, some fungal species are of interest because their infection of a susceptible host crop results in diseases negatively affecting food supply and quality. These diseases are expected to be influenced by rotation crops which could impact the development of plant pathogens and their genetic biodiversity. The objectives of this study were to assess the biodiversity of fungal pathogens in durum wheat, to identify the naturally occurring fungi that could have biocontrol potential, and to define the impact of crop rotation with non-cereal crops on fungal populations in durum wheat. For this purpose, in 2004, 2005, and 2006, soil and durum wheat plant samples were collected after preceding crops of <i>Pisum sativum</i> L. (pea), <i>Lens culinaris</i> Medik (lentil), <i>Cicer arietinum</i> L. (chickpea), <i>Brassica napus</i> L. (canola) and <i>Triticum turgidum</i> L. (durum) in a long term experimental site in Swift Current, Sakatchewan. Samples were analyzed using a combination of traditional cultivation techniques and polymerase chain reaction (PCR), sequencing, and denaturing gradient gel electrophoresis (DGGE) techniques. <p>Fusarium species, known as the causal agent of Fusarium head blight (FHB) and Fusarium damaged kernels (FDK) were among the most ubiquitous and abundant in durum tissues. The most prevalent of all Fusarium at the study site were <i>F. avenaceum, F. reticulatum</i>, and <i>F. tricinctum</i>. Other recovered potential fungal pathogens belonged to the genera Bipolaris, Phaeosphaeria, Pyrenophora, Cladosporium, Epicoccum, Alternaria, Cladosporium, Arthrinium, Nigrospora, and Microdochium. Principal component analysis revealed negative correlations between Acremonium, Chaetomium, Penicillium, and pathogenic Fusarium, Bipolaris, Pyrenophora, and Alternaria. These isolates could be antagonistic, and their potential as biocontrol agents against pathogens colonizing durum wheat in the semiarid Saskatchewan should be assessed.<p>Crop rotation had a limited impact on the abundance of fungal pathogens. Fusarium torulosum was less abundant in durum following canola while Bipolaris sorokiniana was less abundant in durum following pea. Even if no single crop rotation reduced significantly the prevalence of F. avenaceum in durum wheat, results suggest that a successful control of this important pathogen requires an integrated approach using diversified rotations.

Fungi contribute to key processes in the sustainable function of terrestrial ecosystems including nutrient cycling and transport of water to plants. However, some fungal species are of interest because their infection of a susceptible host crop results in diseases negatively affecting food supply and quality. These diseases are expected to be influenced by rotation crops which could impact the development of plant pathogens and their genetic biodiversity. The objectives of this study were to assess the biodiversity of fungal pathogens in durum wheat, to identify the naturally occurring fungi that could have biocontrol potential, and to define the impact of crop rotation with non-cereal crops on fungal populations in durum wheat. For this purpose, in 2004, 2005, and 2006, soil and durum wheat plant samples were collected after preceding crops of <i>Pisum sativum</i> L. (pea), <i>Lens culinaris</i> Medik (lentil), <i>Cicer arietinum</i> L. (chickpea), <i>Brassica napus</i> L. (canola) and <i>Triticum turgidum</i> L. (durum) in a long term experimental site in Swift Current, Sakatchewan. Samples were analyzed using a combination of traditional cultivation techniques and polymerase chain reaction (PCR), sequencing, and denaturing gradient gel electrophoresis (DGGE) techniques. <p>Fusarium species, known as the causal agent of Fusarium head blight (FHB) and Fusarium damaged kernels (FDK) were among the most ubiquitous and abundant in durum tissues. The most prevalent of all Fusarium at the study site were <i>F. avenaceum, F. reticulatum</i>, and <i>F. tricinctum</i>. Other recovered potential fungal pathogens belonged to the genera Bipolaris, Phaeosphaeria, Pyrenophora, Cladosporium, Epicoccum, Alternaria, Cladosporium, Arthrinium, Nigrospora, and Microdochium. Principal component analysis revealed negative correlations between Acremonium, Chaetomium, Penicillium, and pathogenic Fusarium, Bipolaris, Pyrenophora, and Alternaria. These isolates could be antagonistic, and their potential as biocontrol agents against pathogens colonizing durum wheat in the semiarid Saskatchewan should be assessed.<p>Crop rotation had a limited impact on the abundance of fungal pathogens. Fusarium torulosum was less abundant in durum following canola while Bipolaris sorokiniana was less abundant in durum following pea. Even if no single crop rotation reduced significantly the prevalence of F. avenaceum in durum wheat, results suggest that a successful control of this important pathogen requires an integrated approach using diversified rotations.

No description available.

La fusariose de l’épi est une maladie fongique qui touche toutes les cultures de céréales à paille à travers le monde entrainant des baisses de rendements et de la qualité des grains. La fusariose pose également un problème pour la sécurité alimentaire lié à la contamination des grains infectés par des mycotoxines. Le développement de variétés résistantes est considéré comme la méthode la plus efficace et la plus durable pour réduire les dommages causés par la maladie et pour limiter la contamination par les mycotoxines. L’amélioration de la résistance à la fusariose chez le blé dur (Triticum durum Desf.) demeure un défi du fait de son extrême sensibilité à la maladie et de la faible variabilité génétique disponible pour ce caractère. L’objectif principal de cette thèse a été d’évaluer l’effet de Fhb1, le QTL majeur de résistance à la fusariose chez le blé tendre (Triticum aestivumL.), au sein de fonds génétiques de blé dur élite. Pour cela, trois populations de cartographie, comprenant chacune environ 100 F7-RIL (lignées pures recombinantes ou « recombinant inbred lines »), ont été développées à partir de croisements entre la lignée expérimentale de blé dur DBC-480, portant une introgression de Fhb1, et les cultivars de blé dur Karur, Durobonus et SZD1029K. Les lignées ont été évaluées au champ, sur trois saisons, pour leur résistance globale à la fusariose après inoculation en spray de Fusarium culmorum. Des notations morphologiques (date de floraison, hauteur des plantes) ont également été réalisées afin d'évaluer leur influence sur l'infestation. Les lignées ont été génotypées à l’aide de marqueurs SSR et de marqueurs GBS (génotypage par séquençage ou « genotyping-by-sequencing ») développés par DArTseq. L’analyse de liaison a permis d’identifier des QTL de résistance sur les bras des chromosomes 2BL, 3BS, 4AL, 4BS, 5AL et 6AS. DBC-480 contribuait à l’allèle de résistance à tous ces loci. Le QTL sur 3BS a été détecté au sein des trois populations centré sur l’intervalle de Fhb1, confirmant, pour la première fois, son introgression dans le blé dur. L’évaluation de la résistance à la propagation après inoculation ponctuelle, réalisé au sein d’une des trois populations, a également permis de valider l’effet de Fhb1 sur la résistance de type 2 chez le blé dur. La hauteur des plantes influe fortement sur la résistance globale à la fusariose et, en particulier, l’allèle de nanisme Rht-B1b est associé à une plus grande sensibilité à la maladie dans les trois populations. Cependant, l’effet négatif de Rht-B1b sur la résistance est largement compensé dans les lignées possédant Fhb1. Des lignées semi-naines avec un meilleur niveau de résistance ont été sélectionnées et favoriseront le développement de cultivars de blé dur résistants à la fusariose. / Fusarium head blight (FHB) is a devastating disease affecting small-grain cereals worldwide causing yield and quality losses. FHB affects food safety due to the contamination of infected grains by mycotoxins. Host plant resistance is considered the most efficient and sustainable approach to contain FHB and mycotoxin contaminations. In durum wheat (Triticum durum Desf.) breeding for FHB resistance remains a challenge due to its extreme susceptibility and to lack of genetic variation available in the primary durum wheat gene pool. The primary goal of this thesis was to evaluate the effect of Fhb1, the major common wheat (Triticum aestivum L.) FHB resistance QTL, in elite durum wheat background. Three F7-RIL (recombinant inbred lines) mapping populations of about 100 lines were developed from crosses between the durum wheat experimental line DBC-480, harboring Fhb1, and the durum wheat cultivars Karur, Durobonus and SZD1029K. The RILs were tested under field conditions by artificial spray inoculation with Fusarium culmorum in three seasons. Morphological traits (flowering date, height) were also recorded to assess their influence on FHB infestation. Genotyping of the lines was performed with SSR and genotyping-by-sequencing (GBS) DArTseq markers. QTL analysis identified genomic regions associated with FHB resistance on chromosome arms 2BL, 3BS, 4AL, 4BS, 5AL and 6AS. DBC-480 contributed the resistant allele at all loci. Fhb1 was detected in all three populations, demonstrating for the first time its successful deployment in durum wheat. The effect of Fhb1 on FHB resistance in durum wheat was further verified by evaluating type 2 resistance in one of the three populations. Plant height had a strong influence in modulating FHB severity. Although the semi-dwarf allele Rht-B1b was associated with increased FHB susceptibility, its negative effect was efficiently counterbalanced in lines carrying Fhb1. Semi-dwarf lines with enhanced levels of resistance were selected and will assist the development of FHB resistant cultivars.

Typescript (photocopy) / Digitized by Kansas Correctional Industries

Durum wheat (<i>Triticum turgidum</i> L. var. durum, 2n = 4x = 28, AABB genomes) is used predominantly for semolina and pasta products, but there is increasing interest in using durum for bread-making to provide alternative markets during periods of overproduction. The goal of this study was to characterize the bread-making quality of durum wheat cultivars and emmer (<i>Triticum turgidum</i> L. var. dicoccum, 2n = 4x = 28) derived breeding lines derived from crosses of durum wheat with an Emmer land race 97Emmer19 from Iran. Emmer-derived breeding lines were evaluated along with three high quality bread wheat (<i>Triticum aestivum</i> L., 2n = 6x = 42, AABBDD genomes) cultivars and seven durum wheat cultivars across three environments in replicated yield trials in the 2005 and 2006 growing seasons. Four 1AS.1AL-1DL translocation lines which carry the Glu-D1d allele [high molecular weight glutenin subunit (HMW-GS) pair 1Dx5+1Dy10] from chromosome 1D of bread wheat were also evaluated. In general, durum wheat cultivars with elevated gluten strength and/or increased dough extensibility were noted to have higher loaf volume (LV) than those with weaker gluten. The 1AS.1AL-1DL translocation line L252 carrying the LMW-1 banding pattern had better dough mixing stability and LV than the translocation lines with the LMW-2 banding pattern. The 1AS.1AL-1DL translocation lines had higher grain protein concentrations (GPC), but the lowest loaf volumes of all the lines tested. These translocation lines also exhibited unappealing external loaf quality (loaf shape and appearance) and poor internal loaf quality (crumb structure). Variation in bread-making quality attributes were observed among durum genotypes. 97Emmer19 exhibited higher LV than all the durum wheats evaluated and approached the loaf volume achieved with the bread wheat cultivar AC Superb. Breeding lines derived from crosses of 97Emmer19 to strong gluten durum cultivars (WB881 or AC Navigator) had higher LV than those of the durum checks. 97Emmer19 carried Glu-A1a* (HMW-GS 1Ax1) and the progeny carrying that allele generally exhibited higher loaf volumes. Durum wheat genotypes expressing the Glu-B1d (HMW-GS pair Bx6+By8) allele exhibited better overall bread-making quality compared with those expressing the Glu-B1b (HMW-GS pair Bx7+By8) allele. The durum cultivar Arcola and the emmer-derived breeding line 2000EB4, showed higher alveograph extensibility (L) values than did the bread wheat check AC Barrie. The durum wheat genotypes (with the exception of Stewart-63) and emmer-derived breeding lines exhibited better dough extensibility than the USDA-ARS 1AS.1AL-1DL translocation lines. These results indicate that there is potential to select for genotypes with improved baking quality in durum breeding programs.

Durum wheat (<i>Triticum turgidum</i> L. var. durum, 2n = 4x = 28, AABB genomes) is used predominantly for semolina and pasta products, but there is increasing interest in using durum for bread-making to provide alternative markets during periods of overproduction. The goal of this study was to characterize the bread-making quality of durum wheat cultivars and emmer (<i>Triticum turgidum</i> L. var. dicoccum, 2n = 4x = 28) derived breeding lines derived from crosses of durum wheat with an Emmer land race 97Emmer19 from Iran. Emmer-derived breeding lines were evaluated along with three high quality bread wheat (<i>Triticum aestivum</i> L., 2n = 6x = 42, AABBDD genomes) cultivars and seven durum wheat cultivars across three environments in replicated yield trials in the 2005 and 2006 growing seasons. Four 1AS.1AL-1DL translocation lines which carry the Glu-D1d allele [high molecular weight glutenin subunit (HMW-GS) pair 1Dx5+1Dy10] from chromosome 1D of bread wheat were also evaluated. In general, durum wheat cultivars with elevated gluten strength and/or increased dough extensibility were noted to have higher loaf volume (LV) than those with weaker gluten. The 1AS.1AL-1DL translocation line L252 carrying the LMW-1 banding pattern had better dough mixing stability and LV than the translocation lines with the LMW-2 banding pattern. The 1AS.1AL-1DL translocation lines had higher grain protein concentrations (GPC), but the lowest loaf volumes of all the lines tested. These translocation lines also exhibited unappealing external loaf quality (loaf shape and appearance) and poor internal loaf quality (crumb structure). Variation in bread-making quality attributes were observed among durum genotypes. 97Emmer19 exhibited higher LV than all the durum wheats evaluated and approached the loaf volume achieved with the bread wheat cultivar AC Superb. Breeding lines derived from crosses of 97Emmer19 to strong gluten durum cultivars (WB881 or AC Navigator) had higher LV than those of the durum checks. 97Emmer19 carried Glu-A1a* (HMW-GS 1Ax1) and the progeny carrying that allele generally exhibited higher loaf volumes. Durum wheat genotypes expressing the Glu-B1d (HMW-GS pair Bx6+By8) allele exhibited better overall bread-making quality compared with those expressing the Glu-B1b (HMW-GS pair Bx7+By8) allele. The durum cultivar Arcola and the emmer-derived breeding line 2000EB4, showed higher alveograph extensibility (L) values than did the bread wheat check AC Barrie. The durum wheat genotypes (with the exception of Stewart-63) and emmer-derived breeding lines exhibited better dough extensibility than the USDA-ARS 1AS.1AL-1DL translocation lines. These results indicate that there is potential to select for genotypes with improved baking quality in durum breeding programs.

In order to search for novel bioactive compounds, we have investigated the secondary metabolites of the soft corals Nephthea erecta, Lobophytum durum, and Sarcophyton ehrenbergi. Chemical examinations on the organic extracts of N. erecta, have resulted in the isolation of six new sesquiterpenoids (1-6), a new calamenene-type sesquiterpene with a mercaptan group, erectathiol (7), a new tri-nor-eudesmadienone (8), two known sesquiterpenoids (9 and 10), one novel seco-germacrane sesquiterpene (11), three unexpected artificial 19-oxygenated steroids (12-14), as well as twelve new polyhydroxylated steroids (15-26). Furthermore, twelve new cembranolids, durumolides A-L (27-38), three unprecedented hemiketal cembranoids, durumhemiketalolides A-C (39-41), six previously described cembranolids (42-47), together with one known metabolite, peridinin (48), were isolated from the acetone extracts of L. durum. Chemical investigation of S. ehrenbergi, has led to the isolation of a known ceramide (49), two new cerebrosides, sarcoehrenosides A (50) and B (51), along with three previously characterized cerebrosides (52-54). The structures of the isolated metabolites were elucidated through extensive spectroscopic analyses, while the relative stereochemistry of 10 and 44 were further confirmed by X-ray diffraction analyses. Moreover, the absolute configurations of 24, 25, 29, 34, 38, and 43-45 were established by application of modified Mosher¡¦s method. The cytotoxicities, antibacterial activities, anti-inflammatory effects, and inhibition assay of HCMV (human cytomegalovirus) endonuclease activities of these isolated metabolites were evaluated in vitro.