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Endometrial carcinoma : prognostic factors and protein expression profiling /Lundgren, Caroline, January 2004 (has links)
Diss. (sammanfattning) Stockholm : Karol. inst., 2004. / Härtill 4 uppsatser.
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Análise por modelagem e dinâmica molecular da interação entre a integrina α6β1 e a laminina 111 humana / Molecular modelling and dynamics analisys of human α6β1 integrin and laminin 111 interactionAline Rossi da Silveira 07 May 2007 (has links)
A matriz extracelular (ECM) é definida como um complexo de proteínas e glicoproteínas que envolve as células nos mais diversos tecidos. A laminina é uma glicoproteína que é formada por três cadeias polipeptídicas dispostas em cruz. Sua
função é a de ancorar as células epiteliais à ECM, da qual faz parte, através de associações a outras proteínas como as integrinas, o colágeno, a elastina e a fibronectina. As integrinas são receptores de adesão localizadas na superfície celular, que medeiam a interação célula-ECM. Estas interações são cruciais para diversos processos biológicos, tais como a diferenciação celular, a transdução de sinais, a
resposta imunológica, a cicatrização de ferimentos e a formação de metástases.
Porém a forma estrutural com que a interação entre a integrina e a laminina ocorre ainda não foi esclarecida. Neste contexto este trabalho visa analisar, em escala molecular, a forma com que a integrina α6β1 e a laminina 111 humanas interagem.
Assim, foram conduzidos vários estudos, entre eles: i) alinhamentos estruturais e seqüenciais das regiões β-propeller e βA de integrinas não-possuidoras de domínio I; ii) construção do modelo das regiões β-propeller e βA da integrina α6β1 em complexo com pequenos inibidores peptídicos do tipo ECD ou RGD; iii) alinhamento entre os
domínios LG de lamininas; iv) construção do modelo do domínio LG1 da laminina 111; e v) construção do primeiro modelo descrito do complexo formado pela porção N-
terminal da integrina α6β1 e o domínio LG1 da laminina 111. Para tanto, foram aplicadas as técnicas de modelagem por homologia e dinâmica molecular, além de alinhamentos entre as cadeias α e β de integrinas, e dos domínios LG de lamininas.
Inicialmente os resultados mostraram que o loop que corresponde à região entre os subdomínios D2 e D3 da cadeia α6 discrimina ligantes por interações eletrostáticas, e a partir disso, que a integrina α6β1 possui interação preferencialmente com peptídeos do tipo ECDF. Foi mostrado que o domínio LG1 de laminina 111 interage com a integrina α6β1 pelo contato da fita β H com o β-propeller de α6. Além disso, por seu
caráter eletrostático e proximidade à fita β H, o resíduo Asp82 de LG1 se adere ao íon Mg+2 do MIDAS da integrina α6β1, e que esta interação é indispensável à ligação
entre as duas proteínas. / The extracelullar matrix (ECM) is formed by an assembly of proteins and glycoproteins which surrounds the cells, in various tissues. The laminin is a glycoprotein localized in the ECM that consists of three polypeptidic chains cross-
shaped. It functions by anchoring epithelial cells to basal lamin, through associations with integrins, collagen, elastin and fibronectin. Integrins are adhesion receptors localized on cellular surface, that mediate interactions between cells and ECM. The interactions between proteins of ECM and cellular proteins are crucial for many normal biological processes such as cell differentiation, signal transduction, immune responses, wound healing and metastasis formation. The nature of interactions between laminin and integrin has not been fully identified yet. The present work aims to analyze, in an molecular scale, the interaction between human α6β1 integrin and laminin 111. In this work we conducted many studies, including: i) structural and sequential alignments of β-propeller and βA regions in lacking I-domain integrins; ii)
model building of β-propeller e βA regions of α6β1 integrin complexed with small ECD or RGD peptide antagonists; iii) sequential alignment of various laminin LG domains; iv) model building of laminin 111 LG1 domain; and v) model building of the first described complex between the N-terminal portion of α6β1 integrin and laminin 111 LG1 domain. In order to do this, homology modeling and molecular dynamics techniques were applied, together with alignments between integrins α and β chains, and laminin LG domains. Our initial results show that the loop between blades 3 and 4 of α6 integrin subunit discriminates ligands by electrostatic interactions. Therefore we assumed that α6β1 integrin preferentially interacts with ECDF based peptides. It was demonstrated that the laminin 111 LG1 domain interacts with α6β1 integrin by the
contact of this H β strand and α6 β-propeller. Further, by its electrostatic function and proximity to H β strand, LG1 residue Asp82 adheres to Mg+2 containing MIDAS in α6β1 integrin. This interaction appears to be indispensable for α6β1 and laminin 111 binding.
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Estudo da relaÃÃo do Infiltrado InflamatÃrio Mononuclear e ExpressÃo de Ki-67, ColÃgeno IV e Laminina em Cistos Radiculares / Study Of The Relationship of Mononuclear Inflammatory Infiltrade and Ki-67, Laminin And Colagem Type IV expression in radicular CystsRenata Veras Carvalho MourÃo 19 February 2013 (has links)
CoordenaÃÃo de AperfeiÃoamento de Pessoal de NÃvel Superior / Os cistos dos ossos maxilares sÃo classificados como odontogÃnicos e nÃo odontogÃnicos. Dentre os odontogÃnicos inflamatÃrios, destaca-se o cisto radicular, e entre os de desenvolvimento, o dentÃgero. Estes cistos e suas variantes apresentam etiopatogÃnese e comportamento biolÃgico diferentes, mas sÃo igualmente lÃticos. A atividade proliferativa do epitÃlio de revestimento, dos componentes da membrana basal e da matriz extracelular, possivelmente, interferem nos mecanismos de crescimento, constituindo alvos de pesquisas. Este trabalho teve por objetivo avaliar a relaÃÃo do infiltrado inflamatÃrio mononuclear com a expressÃo de marcadores de proliferaÃÃo (Ki 67) e das proteÃnas da membrana basal e matriz extracelular nos cistos radiculares. Trata-se de um estudo retrospectivo e observacional tendo sido realizado um levantamento dos casos catalogados no ServiÃo de Biopsia do Departamento de Patologia e Medicina Legal (FAMED) e no LaboratÃrio de Patologia Bucal (FFOE) (UFC). ApÃs a revisÃo histolÃgica, os grupos foram divididos em cisto radicular intensamente inflamado (CRII) (n=17), cisto radicular levemente inflamado(CRLI)(n=.9) e cisto dentÃgero (CD) (n= 9). A presenÃa e intensidade do infiltrado inflamatÃrio histiolinfoplasmocitÃrio e preservaÃÃo do epitÃlio de revestimento foram os parÃmetros utilizados para seleÃÃo dos casos. Os espÃcimes foram submetidos à reaÃÃo de imuno-histoquÃmica por estreptoavidina biotina, utilizando-se os anticorpos Ki 67 (DakoÂ, 1:50), anti-colÃgeno IV (DBSÂ, 1:40) e anti-laminina (DBSÂ, 1:20). A expressÃo de Ki 67 foi mais intensa no grupo CRLI, quando comparada ao grupo CRII e CD. A expressÃo de colÃgeno tipo IV na membrana basal foi significante no grupo CRLI, quando comparada com o grupo CRII e CD. Jà a imunomarcaÃÃo de matriz extracelular variou de ausente a fraca nos grupos CRII e CRLI, enquanto no CD se exibiu de forma fraca a moderada, sendo esta diferenÃa significativa. A expressÃo de laminina em membrana basal nos grupos CRII e CD foi negativa e no grupo dos CRLI foi fraca e pontual. Concluiu-se que a presenÃa e a intensidade do conteÃdo inflamatÃrio na parede dos cistos radiculares parecem modificar a expressÃo dos fatores de proliferaÃÃo no epitÃlio de revestimento, e colÃgeno tipo IV e laminina na membrana basal, mas nÃo interferem no comportamento do colÃgeno IV da matriz extracelular nos cistos radiculares. A expressÃo de componentes da membrana basal (laminina e colÃgeno tipo IV) à maior nos cistos radiculares com leve infiltrado inflamatÃrio. / Jawbone cysts are classified as odontogenic and non-odontogenic cysts. The radicular cyst is the most common odontogenic cyst of inflammatory origin, whereas the detigerous cyst is the most common type of developmental odontogenic cyst. These cysts and their variations have different etiopathogenesis and biological behavior, but are equally lytic. The proliferation activity of the epithelial lining and the components of the basement membrane and extracellular matrix constitute targets of research. The aim of this study was to evaluate the relation between mononuclear inflammatory infiltrate and the expression of proliferative immunomarkers (Ki 67), and proteins of basement membrane and extracellular matrix in radicular cysts. In this retrospective observational study, all cases of jawbone cysts that had been recorded in the files of the Department of Pathology and Legal Medicine (FAMED), and of the Laboratory of Oral Pathology (FFOE) of the Federal University of Cearà (UFC) and reviewed. After histological revision, the groups were divided into heavily inflamed radicular cysts (HIRC) (n=17), slightly inflamed radicular cysts (SIRC) (n=9) and dentigerous cysts (DC) (n=9). The presence and intensity of the lymphoplasmacytic inflammatory infiltrate and the preservation of the epithelial lining were the parameters used to select the cases. Immunohistochemical analyses were performed using the standard streptavidin-biotin-peroxidase method. The primary antibodies used in this study included Ki 67 (DakoÂ, 1:50), Anti-Collagen Type IV (DBSÂ, 1:40) and Anti- Laminin (DBSÂ, 1:20).The immunoexpression of Ki-67 was more intense in the SIRC group compared to the HIRC group and DC. Likewise, the immunoexpression of Anti-Collagem Type IV in the basement membrane of the SIRC group presented a statistically significant difference compared to the HIRC group and DC . The expression of laminin in the basement membrane and in group HIRC and DC was negative and the group of SIRC was weak and punctual. It was concluded that presence and severity of inflammatory content wall of radicular cysts appear to modify the expression of proliferation factors in the coating epithelium and collagen type IV and laminin in the basement membrane but not modific with the behavior of extracellular matrix in radicular cyst. The expression of basement membrane components (laminin and collage type IV) is higher in radicular cyst with mild inflammatory infiltrade.
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Type XVIII and XV collagens: primary structure of human alpha1(XVIII) chain, phenotypic studies of type XVIII collagen single null and type XVIII and XV collagen double null miceYlikärppä, R. (Ritva) 24 October 2003 (has links)
Abstract
In this thesis study, the primary structure of the human α1(XVIII) polypeptide was elucidated, its tissue distribution was studied, and the phenotypic changes in the mouse eye due to lack of type XVIII collagen in a knock-out mouse model were studied further. In addition, the consequences of simultaneous lack of both type XVIII and XV collagen were studied in a mouse model lacking both of these proteins.
Two variant forms of human α1(XVIII) polypeptide were identified in this study, although, to date, a third form has also been characterized. The analysis of tissue distribution of the two polypeptide forms revealed differences in their tissue distribution, since the longest variant occurs prominently in the liver, while the short form is the major transcript in other tissues studied, e.g. in the kidney. The study of the type XVIII single null mouse eyes revealed abnormalities in the anterior eye segment in addition to the previously reported defects in the posterior eye part. In the type XVIII single null mice the iris was fragmented, pigment deposits could be seen in the pupil, and the pupillary ruff in the edge of a normal mouse iris was missing in these mice. The ciliary body was also abnormal, since the ciliary processes start to show regression in adult animals and eventually the basal infoldings of the non-pigmented ciliary body epithelia become flattened in the null mice. The intraocular pressure stabilizes to a lower level in adult mutant mice compared to controls, most likely reflecting the atrophied ciliary epithelia. The BM zones were also defective in the type XVIII null mouse eyes. The absence of an immunosignal with one of the antibodies detecting laminin γ2 chain in the type XVIII null mouse eyes may implicate conformational changes in the laminin γ2 chain due to lack of type XVIII collagen, and subsequently interaction between type XVIII collagen and laminin γ2 chain in normal mouse eye BMs. The study of the type XVIII and XV double null mice revealed that these mice were viable and fertile and had no major additional abnormalities compared to both single null mice. However, the regression of hyaloid capillaries (vasa hyaloidea propria, VHP) was studied in these mice, and a slight delay in the detachment of these vessels from the retina was noticed. Thus, the two collagens do not function entirely independently from each other.
The studies with type XVIII collagen single null mice indicate that in addition to the posterior eye phenotype, this collagen is needed for the normal structural integrity of the anterior eye segment and basement membranes of the eye. The mouse model lacking both type XVIII and type XV collagen indicates that the roles of the two collagens are essentially diverse, although a slight compensatory effect was observed in the detachment of the hyaloid capillaries from the retina.
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The sandwich theory:a bioactivity based explanation for posterior capsule opacification after cataract surgery with intraocular lens implantationLinnola, R. (Reijo) 04 May 2001 (has links)
Abstract
This study was undertaken to identify mechanisms of adhesion of intraocular lenses (IOLs) to the
capsular bag after cataract surgery and IOL implantation. It was also done to challenge the sandwich
theory presented for posterior capsular opacification (PCO): If the IOL is made of a bioactive material
it would allow a single lens epithelial cell layer to bond both to the IOL and the posterior capsule at
the same time. This would produce a sandwich pattern including the IOL, the cell monolayer and the
posterior capsule. The sealed sandwich structure would prevent further epithelial ingrowth. The degree
of bioactivity of the IOL could explain the basic difference in the incidence of PCO and capsulotomy
rates with different IOL materials.
The sandwich theory was put forward on the basis of a search for a keratoprosthesis material,
which would allow maximal adhesion of the prosthesis to corneal tissue. Titanium and glass-ceramic
coated titanium were found to develop better adhesion than poly (methyl methacrylate) (PMMA). The
adhesion of PMMA to the corneal stromal tissue was loose, and down growth of corneal epithelial cells
was seen around the prosthesis.
The differences between various IOL materials were first tested with rabbit corneal tissue
cultures. There was better adhesion of corneal tissue to soft, hydrophobic acrylate than to PMMA,
heparin surface modified (HSM)-PMMA, silicone or hydrogel IOLs.
To assess differences in protein adhesion to IOL surfaces, different IOLs were incubated for 24
hours with radioactive iodine labeled fibronectin. Soft hydrophobic acrylate (AcrySof®) showed the
highest binding of fibronectin, and the differences relative to all the other materials were significant
(p < 0.01-0.001), except to PMMA (p = 0.31).
The sandwich theory and the results with rabbit corneal tissue cultures and the protein adhesion
study in vitro were evaluated against the results found in pseudophakic autopsy eyes. Altogether, 70
autopsy eyes were analyzed. From 38 autopsy eyes containing PMMA, silicone, soft hydrophobic acrylate or
hydrogel IOLs histological sections were prepared from the capsular bag and immunohistochemical analyses
were performed for fibronectin, vitronectin, laminin and collagen type IV. A total of 152 specimens were
analyzed. From 32 autopsy eyes containing IOLs made of PMMA, silicone, acrylate or hydrogel, IOLs were
explanted from the capsular bag and immunohistochemical analysis was done on both sides of the IOLs for
fibronectin, vitronectin, laminin or collagen type IV. Soft hydrophobic acrylate IOLs had significantly
more adhesion of fibronectin to their surfaces than PMMA or silicone IOLs. Also, more vitronectin was
attached to acrylate IOLs than to the other IOL materials. Silicone IOLs had more collagen type IV
adhesion in comparison to the other IOL materials studied. In histologic sections a sandwich-like
structure (anterior or posterior capsule-fibronectin-one cell layer-fibronectin-IOL surface) was seen
significantly more often in eyes with acrylate IOLs than in PMMA, silicone or hydrogel IOL eyes.
These studies support the sandwich theory for posterior capsule opacification after
cataract surgery with IOLs. The results suggest that fibronectin may be the major extracellular protein
responsible for the attachment of acrylate IOLs to the capsular bag. This may represent a true bioactive
bond between the IOL and the lens epithelial cells, and between the IOL and the capsular bag. This may
explain the reason for clinical observations of less posterior capsular opacification and lower
capsulotomy rates with the soft hydrophobic acrylate material of AcrySof® IOLs compared to the
other IOL materials studied.
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Extracellular laminin regulates hematopoietic potential of pluripotent stem cells through integrin β1-ILK-β-catenin-JUN axis / 細胞外ラミニンはインテグリンβ1-ILK-βカテニン-JUN経路を介して多能性幹細胞の造血能を制御するYuzuriha, Akinori 24 May 2021 (has links)
京都大学 / 新制・課程博士 / 博士(医学) / 甲第23383号 / 医博第4752号 / 新制||医||1052(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 河本 宏, 教授 髙折 晃史, 教授 金子 新 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM
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Laminin-332 Regulates Expression of CC chemokine ligand 7 and 20 in Human Umbilical Vein Endothelial Cells / Laminin-332 Reglerar Uttryck av CC-kemokinligand 7 och 20 i Humana Venösa Endotelceller från NavelsträngBolaños, Amanda January 2021 (has links)
Cells that cover the body’s inner and outer surfaces are called epithelial cells. Endothelial cells are specialised epithelial cells which, among other things, line the inside of blood vessels. The endothelium is anchored to the basement membrane through molecules called laminins. In an acute inflammation laminins can bind to leukocytes so that they can reach the inflamed tissue. Chemokines are molecules that attract leukocytes and can be synthesized by endothelial cells. This report will investigate what impact stimulation with laminin-332 on endothelial cells has on their gene expression for the chemokines CCL7, CCL8, CCL20, CXCL6 and CXCL10. A previously performed analysis for protein expression which had been performed under the same conditions revealed an upregulation of all chemokines except for CCL8, which was downregulated. The analysis for protein expression was executed with Olink’s Proximity Extension Assay and analysis of gene expression was carried out with qRT-PCR. The results revealed that gene expression for CCL8, CXCL6 and CXCL10 was under the detection limit for the chosen method. Gene expression for CCL7 and CCL20 was detectable and revealed an upregulation of gene expression for both genes, which was consistent with the results from the study that analysed protein expression. This led to the conclusion that stimulus with laminin-332 upregulates mRNA expression, protein production and protein secretion in human umbilical vein endothelial cells for chemokines CCL7 and CCL20. Lastly, the involvement of the chemokines CCL7 and CCL20 in inflammation and cancer diseases is explored as well as their potential role as a biomarker for clinical treatment. / Celler som täcker kroppens inre och yttre ytor kallas för epitelceller. Endotelceller är specialiserade epitelceller som bland annat bekläder insidan av blodkärlen. Endotelet är förankrat till basalmembranet via molekyler kallade lamininer. Vid en akut inflammation kan lamininer binda till leukocyter för att de ska kunna ta sig ut till den inflammerade vävnaden. Kemokiner är molekyler som attraherar leukocyter och som kan produceras av endotelcellerna. I denna rapport utforskas vilken påverkan som laminin-332 har på endotelcellers genuttryck för kemokinerna CCL7, CCL8, CCL20, CXCL6 och CXCL10. En tidigare utförd analys för proteinuttryck som gjorts under samma förhållanden visade en uppreglering av samtliga kemokiner, med undantag för CCL8 som blev nedreglerad. Analysen för proteinuttryck var utförd med Olinks Proximity Extension Assay och analys för genuttryck utfördes med qRT-PCR. Resultaten visade att genuttrycket för CCL8, CXCL6 och CXCL10 var för lågt för att detekteras med den valda metoden. Genuttryck för CCL7 och CCL20 var detekterbart och visade båda en uppreglering av genuttryck vilket överensstämde med resultatet från studien som analyserat proteinuttrycket. Detta ledde till slutsatsen att stimulans med laminin-332 uppreglerar uttryck av mRNA, proteinproduktion och proteinsekretion i humana venösa endotelceller från navelsträng för kemokinerna CCL7 och CCL20. Slutligen, utforskas involveringen av kemokinerna CCL7 och CCL20 vid inflammation och cancerassocierade sjukdomar samt vilken roll de kan spela som biomarkörer vid behandling.
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Human natural killer-1 sulfotransferase (HNK-1ST)-induced sulfate transfer regulates laminin-binding glycans on α-dystroglycan / HNK-1STは硫酸基の転移によってα-ジストログリカン上のラミニン結合性糖鎖の発現を制御するNakagawa, Naoki 24 March 2014 (has links)
京都大学 / 0048 / 新制・課程博士 / 博士(人間健康科学) / 甲第18196号 / 人健博第13号 / 新制||人健||1(附属図書館) / 31054 / 京都大学大学院医学研究科人間健康科学系専攻 / (主査)教授 齋藤 邦明, 教授 足立 壯一, 教授 長田 重一 / 学位規則第4条第1項該当 / Doctor of Human Health Sciences / Kyoto University / DFAM
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Etude des adhésines HBHA et LBP impliquées dans l'interaction de Mycobacterium avium ssp. paratuberculosis avec les cellules épithéliales intestinales, cibles privilégiées de la bactérie in vivo / Characterization of HBHA and LBP adhesins involved in the interaction of Mycobacterium avium subsp. paratuberculosis with intestinal epithelial cells, the preferential target in vivoLefrançois, Louise 26 October 2012 (has links)
Mycobacterium avium ssp. paratuberculosis (Map), agent étiologique de la paratuberculose, a évolué en deuxtypes dénommés, S pour« Sheep » et C pour « Cattle ». L’intestin grêle est le site primaire de l’infection à Map mais les mécanismes moléculaires impliqués dans l’implantation du bacille restent largement méconnus. L’objectif de mon projet de thèse visait à identifier et caractériser les adhésines exprimées par Map par des approches génétiques et biochimiques. J’ai ainsi purifié la HBHA et la LBP par chromatographie d’affinité puis les ai identifiés en spectrométrie de masse. L’originalité de ce travail repose sur le polymorphisme de ces adhésines observé entre les souches de type C et S. Cette variabilité a été mise en évidence sur le domaine d’interaction avec les sucres sulfatés de la cellule hôte influençant l’affinité des adhésines pour l’héparine. Ce travail de thèse a permis de caractériser pour la première fois ces deux adhésines produites par Map. Le polymorphisme de la HBHA et de la LBP, discriminant les types C et S, ouvre de nombreuses perspectives sur l’évolution de l’espèce M. avium et le rôle de ces adhésines sur le tropisme intestinal, la préférence d’hôte de Map ou encore leur potentiel diagnostic. / Mycobacterium avium subsp. paratuberculosis (Map), the etiological agent of paratuberculosis, has evolved into two types called, S for "Sheep" and C for "Cattle." The small intestine is the primary site of Map infection but the molecular mechanisms involved in the establishment of bacilli are still unknown. The aim of my thesis was to identify and characterize the adhesins expressed by Map by genetic and biochemical approaches. I purified HBHA and LBP by affinity chromatography then identified them by mass spectrometry. The originality of this work is based on the polymorphism of these adhesins observed between strains of type C and S. This variability has been demonstrated in the binding domain involved in interaction with sulfated sugars of host cell influences adhesins affinity for heparin. This thesis has characterized for the first time these two adhesins produced by Map. Specific polymorphism highlighted related to the evolution of the species avium, opens large number questions on their role on the pathogenesis of Map including the cellular tropism, host preference or interest of these antigens to improve diagnostic.
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Distinct contributions of ECM proteins to basement membrane mechanical properties in DrosophilaTöpfer, Uwe, Santillán, Karla Yanín Guerra, Fischer-Friedrich, Elisabeth, Dahmann, Christian 01 March 2024 (has links)
The basement membrane is a specialized extracellular matrix (ECM) that is crucial for the development of epithelial tissues and organs. In Drosophila, the mechanical properties of the basement membrane play an important role in the proper elongation of the developing egg chamber; however, the molecular mechanisms contributing to basement membrane mechanical properties are not fully understood. Here, we systematically analyze the contributions of individual ECM components towards the molecular composition and mechanical properties of the basement membrane underlying the follicle epithelium of Drosophila egg chambers. We find that the Laminin and Collagen IV networks largely persist in the absence of the other components. Moreover, we show that Perlecan and Collagen IV, but not Laminin or Nidogen, contribute greatly towards egg chamber elongation. Similarly, Perlecan and Collagen, but not Laminin or Nidogen, contribute towards the resistance of egg chambers against osmotic stress. Finally, using atomic force microscopy we show that basement membrane stiffness mainly depends on Collagen IV. Our analysis reveals how single ECM components contribute to the mechanical properties of the basement membrane controlling tissue and organ shape.
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