Mainland Southeast Asia (MSEA) is an area with a long history of human occupation and great ethnolinguistic diversity. The earliest anatomically modern humans arrived ~65 thousand years ago, while presently it has a population size of ~263 million people speaking ~229 languages belonging to five major language families: Austroasiatic (AA), Austronesian (AN), Tai-Kadai (TK), Hmong-Mien (HM), and Sino-Tibetan (ST). Analyses of genome-wide data can provide rich insights into reconstructing human genetic population history, but there is a paucity of genome-wide data from MSEA (mostly limited to the majority groups such as the Kinh and Thai). The goal of this thesis was to analyze newly-genotyped genome-wide data (encompassing ~600 thousand SNPs) from an extensive, detailed sample of ethnolinguistic groups from Vietnam, Thailand, and Laos, encompassing all five major MSEA language families, in order to reconstruct their genetic history and relationships with cultural variation. In Chapter I, I analyzed data from 259 individuals from the Kinh and 21 Vietnamese ethnolinguistic groups. In contrast to previous studies suggesting that genetic diversity in Vietnam largely reflects internal diversification and isolation, I found evidence for different sources of genetic diversity in different linguistic groups, extensive contact between groups, and a likely case of language shift involving AN-speaking groups. In Chapter II, I analyzed data from 463 individuals from 33 ethnolinguistic groups together with 3 published groups (including the Thai), hence in total 36 groups from Thailand and Laos. I found fine-scale genetic structure for the major TK and AA groups according to their linguistic branches, and different levels of local interaction with other linguistic groups in geographical proximity. This diverse structure was also influenced by South Asian admixture, detected in several different linguistic groups from central and southern Thailand, dated to ~600-1000 years ago. This admixture date, together with the geographical distribution of these groups, suggests that the South Asian influence corresponds to the Ayutthaya kingdom period (1350-1767 AD), when there was extensive interactions and political and trading networks between people from MSEA and South Asia.:SUMMARY p.1 ZUSAMMENFASSUNG p.10 CHAPTER I p.20 Extensive ethnolinguistic diversity in Vietnam reflects multiple sources of genetic diversity CHAPTER II p.68 Reconstructing the human genetic history of mainland Southeast Asia: insights from genome- wide data from Thailand and Laos REFERENCES p.111 ACKNOWLEDGMENTS p.114 CURRICULUM VITAE p.115 DECLARATION OF INDEPENDENCE p.117 AUTHOR CONTRIBUTION STATEMENT p.118

<p>This is a story about Lao Pako. Lao Pako is located on a small hill on the southern bank of the river Nam Ngum in central Laos. Four seasons of archaeological fieldwork have yielded considerable amounts of pottery, metallurgical remains, glass beads, stone artefacts, spindle whorls as well as other material and structural information that have created a foundation for interpretation. The archaeological interpretation presents Lao Pako as a place where people came to perform rituals c. 1500 years ago. In these rituals, sophisticated combinations of pottery depositions, infant burials and iron production produced a narrative about what it means to be in the world. Things in and on the ground created, and continue to create, non-verbal sentences about life and death, fertility, decay and worldly reproduction. </p><p>The archaeological interpretation is, however, not the only valid story about Lao Pako. This is a place where spirits are; it is also a tourist resort and a national treasure. These other stories all work to create Lao Pako as a place of interest and are used in this thesis to define the archaeological story, and to visualize the aims and agendas inherent in the production of archaeological knowledge. </p><p>Using the conceptual apparatus of postcolonial and other critical theory, the thesis aims to critically deconstruct the archaeology performed by the author and others. It entails an explicit critique of the deterministic temporal unilinearity that is inherent in the archaeological narrative of the evolution of humankind, as well as against essentialist notions of culture and the dissociation of the past as exotic otherness. Thus, the stories about Lao Pako demonstrate the need to critically revise the role of archaeology in a postcolonial world, and create archaeological stories by which we are touched, moved and disturbed, without resorting to imperialist notions of time and progress.</p>

This is a story about Lao Pako. Lao Pako is located on a small hill on the southern bank of the river Nam Ngum in central Laos. Four seasons of archaeological fieldwork have yielded considerable amounts of pottery, metallurgical remains, glass beads, stone artefacts, spindle whorls as well as other material and structural information that have created a foundation for interpretation. The archaeological interpretation presents Lao Pako as a place where people came to perform rituals c. 1500 years ago. In these rituals, sophisticated combinations of pottery depositions, infant burials and iron production produced a narrative about what it means to be in the world. Things in and on the ground created, and continue to create, non-verbal sentences about life and death, fertility, decay and worldly reproduction. The archaeological interpretation is, however, not the only valid story about Lao Pako. This is a place where spirits are; it is also a tourist resort and a national treasure. These other stories all work to create Lao Pako as a place of interest and are used in this thesis to define the archaeological story, and to visualize the aims and agendas inherent in the production of archaeological knowledge. Using the conceptual apparatus of postcolonial and other critical theory, the thesis aims to critically deconstruct the archaeology performed by the author and others. It entails an explicit critique of the deterministic temporal unilinearity that is inherent in the archaeological narrative of the evolution of humankind, as well as against essentialist notions of culture and the dissociation of the past as exotic otherness. Thus, the stories about Lao Pako demonstrate the need to critically revise the role of archaeology in a postcolonial world, and create archaeological stories by which we are touched, moved and disturbed, without resorting to imperialist notions of time and progress.

La sablière de Khok Sung, dans la province de Nakhon Ratchasima, qui a livré plus d'un millier de fossiles de mammifères et de reptiles (cranes, dents isolées et restes post-craniens), abrite la faune de vertébrés du Pléistocène la plus riche de Thaïlande. La faune mammalienne qui est décrite ici en détail, se compose d'au moins 18 espèces identifiées (12 genres), y compris un primate et des proboscidiens, rhinocéros, suidés, bovidés, cervidés et carnivores. Elle compte principalement des taxons encore représentés de nos jours, ainsi que quelques taxons globalement ou localement éteints. A partir des données paléomagnétiques et des comparaisons fauniques, l'âge de la faune de Khok Sung est estimé au Pléistocène Moyen tardif, vers 188000 ou 213000 ans. Par rapport aux autres faunes diversifiées du Pléistocène d'Asie du Sud Est, l'assemblage de Khok Sung est caractérisé par une association des taxons Stegodon-Ailuropoda, comparable en cela au site de Thum Wiman Nakin, ce qui supporte l'hypothèse selon laquelle le Nord Est de la Thaïlande était un corridor biogéographique appartenant à la route migratoire Sino-Malaise, entre la Chine du Sud et l'île de Java. L'analyse des isotopes stables du carbone à partir de l'émail des ongulés fossiles révèle la présence d'une partition de niches entre les méga-herbivores et au sein des cervidés. Les valeurs du d13C de l'émail suggèrent également que les ruminants ont consommé une grande quantité de plantes en C4, ce qui indique que les prairies à graminées étaient particulièrement répandues en Thaïlande à cette époque où les écosystèmes n'étaient pas encore soumis à l'influence anthropique. La mesure des isotopes stables de l'oxygène, obtenue par échantillonnage sérié de l'émail des dents de grands mammifères, et l'analyse du cénogramme de la localité de Khok Sung reflètent une importante variation saisonnière des précipitations et de la température, associée à des conditions climatiques relativement humides. / The Khok Sung sand pit, Nakhon Ratchasima province, has yielded the richest Pleistocene vertebrate fauna of Thailand, where more than a thousand fossil mammals and reptiles (skulls, isolated teeth, and postcranial remains) were recovered. The mammalian fauna, which is described in details hereby, consists of at least 18 identified species (12 genera), including a primate, proboscideans, rhinoceroses, suids, bovids, cervids, and carnivores, which are characterized by mostly extant elements associated to some completely and locally extinct taxa. The age of the Khok Sung fauna is tentatively attributed to the late Middle Pleistocene as either 188 or 213 ka, based on the paleomagnetic data and on the faunal comparisons. The Khok Sung mammal assemblage yields the Stegodon-Ailuropoda faunal association, most similar in composition to that of Thum Wiman Nakin, supporting the hypothesis that northeastern Thailand was a biogeographic gateway of the Sino-Malayan migration route from South China to Java. An analysis of stable carbon isotopes extracted from the tooth enamel of fossil ungulates reveals evidence of niche partitioning among megaherbivores and within cervids. The enamel carbonate d13C values also suggest a considerable amount of C4 plants in the dietary use of ruminants, indicating that grasslands had significantly expanded in Thailand at that time during which anthropic impacts on the ecosystems were absent. The stable oxygen isotope results, obtained from the serial sampling of large mammal enamel, combined with the cenogram analysis reflect significant seasonal variation in precipitations and temperature for Khok Sung, associated to a relatively humid climate.

In recent years landscape-scale fires have occurred in mainland Southeast Asia, including important protected areas (PAs). There has been increasing concern that landscape-scale fires are degrading the seasonally dry evergreen forest (SEF) element of the forest mosaic to more open deciduous forest and savanna, with serious implications for biodiversity conservation. Present management approaches, including fire suppression and prescribed burning, have not been effective managing for landscape-scale fire. Research was undertaken to investigate the occurrence, cause, effect, frequency and predictability of fire in SEF. SEF has the greatest species biodiversity in the forest mosaic and is potentially the most affected by fire, yet little research has been done on fire in SEF in mainland Southeast Asia. Huai Kha Khaeng (HKK) Wildlife Sanctuary in Thailand was selected as the study area. The objectives included: 1) investigate the area of SEF burned in HKK from 1988 to 2002; 2) investigate the conditions for fire in SEF; 3) determine whether the area of SEF in HKK declined as a result of fire; 4) determine the frequency of fire season years between 1984 and 2001 with the conditions for fire spread in SEF; and 5) determine whether there is a significant relationship between pre-fire season drought codes (Keetch-Byram Drought Index (KBDI) and Canadian Drought Code (DC)) and identified SEF fire season years for 1981 to 2003. Methods included: development of a Landsat fire history with associated interviews and reconnaissance field checks; fieldwork lighting test fires and measuring fuel characteristics; remote sensing change detection work using Landsat imagery; generation of a twenty-one year daily relative humidity minimum record for SEF; and logistic regression of the pre-fire season drought code values with identified SEF ‘fire’ and ‘non-fire’ years. Results showed: 1. Extensive areas of SEF have burned, but that Landsat imagery was not suitable for detecting fire in intact SEF. 2. SEF burned in years when there were fires burning adjacent to SEF in mid March and the moisture content of the SEF leaf litter fuel was less than 15%. 3. Fifteen percent of SEF in HKK has been either degraded or converted to deciduous forest forms in 12 years. 4. Conditions for fire spread in SEF occurred four times in 17 consecutive years. 5. A significant relationship exists between both the Keetch-Byram Drought Code (KBDI) and Canadian Drought Code (DC) and the SEF fire years. Implications are that large-scale fires have adversely affected intact SEF in HKK, and that the current damaging situation can be expected to continue. Whereas the extent of burning in intact SEF is not known, the need to manage the situation is immediate. Landscape-scale fires in HKK can be managed by using January 31st drought code values to predict potential large-scale fire years, followed by an aggressive fire suppression campaign in those years. In other years, fires can be allowed to burn without serious threat to the forest mosaic, and should to some extent be encouraged to maintain open deciduous forests and savanna. Additional research is required to determine whether a similar approach can be used for protected areas in other parts of the region.