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Dendritic functionalization of core-shell magnetic nanoparticles for biotechnology / Fonctionnalisation dendritique de nanoparticules magnétiques coeur-écorce pour la biotechnologieArtiomenco Mitcova, Liubov 17 April 2014 (has links)
Le but de ce travail a été d’élaborer des nanoparticules magnétiques (MNPs) fonctionnalisées avec un groupement maléimide, stables, dispersibles dans l’eau et qui assureront une immobilisation covalente,sélective et efficace de biomolécules. Bien qu’un large choix de MNPs soit disponible dans le commerce, lamodification chimique de surface des MNPs reste une étape indispensable pour l’élaboration de matériauxspécifiques. Un contrôle précis de la fonctionnalisation de surface des MNPs est crucial, car en découlentleurs propriétés physico-chimiques, leur stabilité colloïdale, et la préservation de l’activité biologique de labiomolécule immobilisée. Dans ce travail, nous proposons d’augmenter le nombre de groupes fonctionnels(maléimide) accessibles à la surface de MNPs, en la modifiant par des agents de couplage dendritiques. Deuxtypes de MNPs coeur-écorce de 300 nm (avec un noyau de γ-Fe2O3 et une écorce de polymère ou de silice)ont été utilisés. Afin d’étudier l’effet «dendritique» sur la fonctionnalisation de surface, trois types d’agentsde couplage ont été conçus: des agents de couplage linéaires (contenant un groupe maléimide), des agents decouplage dendritiques à deux branches (contenant deux groupes maléimide) et des agents de couplagedendritiques à quatre branches (contenant quatre groupes maléimide). L’efficacité de ces MNPsfonctionnalisées pour immobiliser des biomolécules ou des modèles de biomolécules a été étudiée. Cetteétude a démontré l’intérêt de la fonctionnalisation de la surface des MNPs coeur-écorce par des structuresdendritiques pour une immobilisation efficace et spécifique de biomolécules. / The purpose of this work is to design stable, water-dispersible, maleimide functionalized magneticnanoparticles (MNPs) that will ensure selective covalent immobilization of biomolecules. While, a largechoice of MNPs is now commercially available, the surface modification of MNPs remains an indispensablestep in the elaboration of such MNPs. A precise control over the surface functionalization of MNPs iscrucial, because it governs their physicochemical properties, their colloidal stability, and their biologicalbehaviour. In this work with the aim to increase the number of functional groups on MNPs’ surfaces, it wasproposed to functionalize MNPs with dendritic coupling agents and to compare their efficiency with thosefunctionalized with a linear analogue. Moreover, it was decided to investigate the “dendritic effect” of thesurface functionalization on two types of core-shell MNPs (300 nm) that consist of a maghemite (γ-Fe2O3)ferrofluid core coated with: (I) polymer shell or (II) silica shell. Therefore, three types of coupling agents(that possess an amino or silane anchoring site) were synthesized: linear coupling agents (containing onemaleimide functional group); two-branched coupling agents (containing two maleimide functional groups)and four-branched dendritic coupling agents (containing four maleimide functional groups). Then, thecapacity of MNPs functionalized with dendritic or linear coupling agents to immobilize biomolecules ormodels of biomolecules was investigated. This study proved the efficiency of the surface functionalizationwith dendritic structures for the immobilization of biomolecules.
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Études structurales et propriétés de reconnaissance d'objets auto-assemblés / Structural studies and recognition properties of self-assembled objectsJeamet, Emeric 23 February 2018 (has links)
Depuis les années 1990, la chimie combinatoire dynamique permet la découverte et la préparation de nouveaux récepteurs synthétiques à partir de briques moléculaires simples sous contrôle thermodynamique. Dans ce contexte, nous avons récemment décrit une nouvelle famille de para-cyclophanes dynamiques: les dyn[n]arènes. Ces macrocycles, composés de briques moléculaires 1,4-bisthiophénoliques fonctionnalisées, ont pu être obtenus à l'échelle du gramme à partir d'une procédure simple ne mettant pas en jeu de purification par chromatographie. Cette accessibilité synthétique a rendu possible une étude structurale permettant la rationalisation des forces motrices mises en jeu lors des processus d'auto-assemblage, mais aussi de leurs propriétés de reconnaissance moléculaire vis-à-vis de molécules ioniques. A partir de données expérimentales et de calculs réalisés en chimie théorique, les phénomènes physiques responsables de la sélectivité et de l'affinité remarquables observées entre l'un des membres de cette famille, un dyn[4]arène poly anionique, et une série d'a,?-alkyle-diamines ont été étudiés. Finalement, au cours de cette étude, nous avons redécouvert une voie de synthèse simple menant à une famille de molécules encore peu étudiée : les dithiocines. La fonctionnalisation de ces objets a été explorée dans le but d'obtenir une plateforme multifonctionnelle pour des applications biologiques / Since the 1990s, dynamic combinatorial chemistry has allowed the discovery and preparation of new synthetic receptors from simple building blocks under thermodynamic control. In this context, we have recently described a new family of dynamic para cyclophanes, the so-called dyn[n]arenes. These macrocycles, made from functionalized 1,4-bisthiophenolic building blocks, could be obtained on a gram scale from a simple purification procedure, and without any chromatography. Their synthetic accessibility allows us to study the driving forces behind their self-assembly, as well as their molecular recognition properties towards ionic guest molecules. Experimental and computational experiments were also conducted to reveal the subtle physical phenomena that are responsible for the remarkable selectivity and affinity observed between a poly-anionic dyn[4]arene and a series of a,?-alkyl-diamines. During these previous studies, we rediscovered a simple synthetic route towards a family of molecules that is unexploited so far: the dithiocins. The functionalization of these molecular objects has been explored in order to generate versatile platforms for biological applications
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Spatially Controlled Covalent Immobilization of Biomolecules on Silicon SurfacesPavlovic, Elisabeth January 2003 (has links)
<p>The work described in this thesis aims to achieving surface patterning through chemical activation of thiolated silicon oxide surfaces, resulting in a spatially controlled covalent immobilization of biomolecules with high resolution.</p><p>Existing chemical methods to immobilize molecules on surfaces do not reach below the micrometer scale while the ones allowing for spatial control mostly lead to non-covalent adsorption of molecules on surfaces, or require several successive chemical reactions to obtain the final covalent immobilization. Methods with improved chemical processes and novel surface modification techniques had to be developed. </p><p>A basic need for studying interactions of biomolecules on chemically modified surfaces with high resolution is the ability to obtain a simple, inexpensive method resulting in ultraflat densely packed and reproducible organic monolayers. Therefore, a new method for silicon oxide chemical derivatization, fulfilling these requirements, was developed. </p><p>Thiol derivatized silicon oxide surfaces allow for a diversity of activation reactions to occur, resulting in thiol-disulfide exchange. The electrooxidation of surface-bound thiol groups was investigated as a way of generating reactive thiolsulfinates/thiolsulfonates, by application of a positive potential difference to the silicon surfaces. Peptide molecules containing thiol groups were successfully immobilized to the electroactivated surfaces. In addition, this new chemical activation method offers the possibility to release the bound molecules in order to regenerate the surfaces. Subsequently, the thiolated surfaces can be reactivated for further use.</p><p>Since the activated area depends directly on the size of the electrodes used for the oxidation, nanoscale activation of the thiolated surfaces was performed by use of an AFM tip as counter-electrode. Electrooxidized patterns, with a line width ranging from 70 nm to 200 nm, were obtained. A thiol-rich protein, b-galactosidase, was selectively immobilized onto the electroactivated patterns.</p><p>An electrochemical version of microcontact printing was developed in order to activate large surface areas with micrometer scale patterns. Conductive soft polymer stamps were produced using an evaporated aluminum coating. Patterned electroactivation of thiols was achieved, and polystyrene beads were subsequently specifically immobilized onto the patterns.</p><p>As a conclusion, these different projects resulted in a strategy enabling the achievement of nanoscale and microscale positioning and immobilization of biomolecules on silicon surfaces, with potential reversibility and reuse of the surfaces.</p>
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On new allotropes and nanostructures of carbon nitridesBojdys, Michael Janus January 2009 (has links)
In the first section of the thesis graphitic carbon nitride was for the first time synthesised using the high-temperature condensation of dicyandiamide (DCDA) – a simple molecular precursor – in a eutectic salt melt of lithium chloride and potassium chloride. The extent of condensation, namely next to complete conversion of all reactive end groups, was verified by elemental microanalysis and vibrational spectroscopy. TEM- and SEM-measurements gave detailed insight into the well-defined morphology of these organic crystals, which are not based on 0D or 1D constituents like known molecular or short-chain polymeric crystals but on the packing motif of extended 2D frameworks. The proposed crystal structure of this g-C3N4 species was derived in analogy to graphite by means of extensive powder XRD studies, indexing and refinement. It is based on sheets of hexagonally arranged s-heptazine (C6N7) units that are held together by covalent bonds between C and N atoms. These sheets stack in a graphitic, staggered fashion adopting an AB-motif, as corroborated by powder X-ray diffractometry and high-resolution transmission electron microscopy. This study was contrasted with one of many popular – yet unsuccessful – approaches in the last 30 years of scientific literature to perform the condensation of an extended carbon nitride species through synthesis in the bulk.
The second section expands the repertoire of available salt melts introducing the lithium bromide and potassium bromide eutectic as an excellent medium to obtain a new phase of graphitic carbon nitride. The combination of SEM, TEM, PXRD and electron diffraction reveals that the new graphitic carbon nitride phase stacks in an ABA’ motif forming unprecedentedly large crystals. This section seizes the notion of the preceding chapter, that condensation in a eutectic salt melt is the key to obtain a high degree of conversion mainly through a solvatory effect. At the close of this chapter ionothermal synthesis is seen established as a powerful tool to overcome the inherent kinetic problems of solid state reactions such as incomplete polymerisation and condensation in the bulk especially when the temperature requirement of the reaction in question falls into the proverbial “no man’s land” of classical solvents, i.e. above 250 to 300 °C.
The following section puts the claim to the test, that the crystalline carbon nitrides obtained from a salt melt are indeed graphitic. A typical property of graphite – namely the accessibility of its interplanar space for guest molecules – is transferred to the graphitic carbon nitride system. Metallic potassium and graphitic carbon nitride are converted to give the potassium intercalation compound, K(C6N8)3 designated according to its stoichiometry and proposed crystal structure. Reaction of the intercalate with aqueous solvents triggers the exfoliation of the graphitic carbon nitride material and – for the first time – enables the access of singular (or multiple) carbon nitride sheets analogous to graphene as seen in the formation of sheets, bundles and scrolls of carbon nitride in TEM imaging. The thus exfoliated sheets form a stable, strongly fluorescent solution in aqueous media, which shows no sign in UV/Vis spectroscopy that the aromaticity of individual sheets was subject to degradation.
The final section expands on the mechanism underlying the formation of graphitic carbon nitride by literally expanding the distance between the covalently linked heptazine units which constitute these materials. A close examination of all proposed reaction mechanisms to-date in the light of exhaustive DSC/MS experiments highlights the possibility that the heptazine unit can be formed from smaller molecules, even if some of the designated leaving groups (such as ammonia) are substituted by an element, R, which later on remains linked to the nascent heptazine. Furthermore, it is suggested that the key functional groups in the process are the triazine- (Tz) and the carbonitrile- (CN) group. On the basis of these assumptions, molecular precursors are tailored which encompass all necessary functional groups to form a central heptazine unit of threefold, planar symmetry and then still retain outward functionalities for self-propagated condensation in all three directions. Two model systems based on a para-aryl (ArCNTz) and para-biphenyl (BiPhCNTz) precursors are devised via a facile synthetic procedure and then condensed in an ionothermal process to yield the heptazine based frameworks, HBF-1 and HBF-2. Due to the structural motifs of their molecular precursors, individual sheets of HBF-1 and HBF-2 span cavities of 14.2 Å and 23.0 Å respectively which makes both materials attractive as potential organic zeolites. Crystallographic analysis confirms the formation of ABA’ layered, graphitic systems, and the extent of condensation is confirmed as next-to-perfect by elemental analysis and vibrational spectroscopy. / Die vorliegende Arbeit befasst sich mit der Synthese und Charakterisierung neuer Allotropen und Nanostrukturen von Karbonitriden und berührt einige ihrer möglichen Anwendungen. Alle gezeigten, ausgedehnten, kovalent verbundenen Karbonitridgerüste wurden in einem ionothermalen Syntheseprozess – einer Hochtemperaturbehandlung in einem eutektischen Salzgemisch als ungewöhnlichem Lösungsmittel – aus einfachen Präkursormolkülen erzeugt. Der Kondensationsmechanismus folgt einer temperaturinduzierten Deaminierung und Bildung einer ausgedehnten, aromatischen Einheit; des dreifach substituierten Heptazines.
Die Dissertation folgt vier übergreifenden Themen, beginnend mit der Einleitung in Karbonitridsysteme und der Suche nach einem Material, welches einzig aus Kohlenstoff und Stickstoff aufgebaut ist – einer Suche, die 1834 mit den Beobachtungen Justus von Liebigs „über einige Stickstoffverbindungen“ begann.
Der erste Abschnitt zeigt die erfolgreiche Synthese von graphitischem Karbonitrid (g-C3N4); einer Spezies, welche auf Schichten hexagonal angeordneter s-Heptazineinheiten beruht, die durch kovalente Bindungen zwischen C- und N-Atomen zusammengehalten werden, und welche in einer graphitischen, verschobenen Art und Weise gestapelt sind.
Der zweite Abschnitt berührt die Vielfalt von Salzschmelzensystemen, die für die Ionothermalsynthese geeignet sind und zeigt auf, dass die bloße Veränderung der Salzschmelze eine andere Kristallphase des graphitischen Karbonitrides ergibt – das g-C3N4-mod2.
Im dritten Abschnitt wird vom Graphit bekannte Interkallationschemie auf das g-C3N4 angewendet, um eine Kalliuminterkallationsverbindung des graphitischen Karbonitirdes zu erhalten (K(C6N8)3). Diese Verbindung kann in Analogie zum graphitischen System leicht exfoliiert werden, um Bündel von Karbonitridnanoschichten zu erhalten, und weist darüberhinaus interessante optische Eigenschaften auf.
Der vierte und letzte Abschnitt handelt von der Einführung von Aryl- und Biphenylbrücken in das Karbonitridmaterial durch rationale Synthese der Präkursormoleküle. Diese ergeben die heptazinbasierten Frameworks, HBF-1 und HBF-2 – zwei kovalente, organische Gerüste.
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Spatially Controlled Covalent Immobilization of Biomolecules on Silicon SurfacesPavlovic, Elisabeth January 2003 (has links)
The work described in this thesis aims to achieving surface patterning through chemical activation of thiolated silicon oxide surfaces, resulting in a spatially controlled covalent immobilization of biomolecules with high resolution. Existing chemical methods to immobilize molecules on surfaces do not reach below the micrometer scale while the ones allowing for spatial control mostly lead to non-covalent adsorption of molecules on surfaces, or require several successive chemical reactions to obtain the final covalent immobilization. Methods with improved chemical processes and novel surface modification techniques had to be developed. A basic need for studying interactions of biomolecules on chemically modified surfaces with high resolution is the ability to obtain a simple, inexpensive method resulting in ultraflat densely packed and reproducible organic monolayers. Therefore, a new method for silicon oxide chemical derivatization, fulfilling these requirements, was developed. Thiol derivatized silicon oxide surfaces allow for a diversity of activation reactions to occur, resulting in thiol-disulfide exchange. The electrooxidation of surface-bound thiol groups was investigated as a way of generating reactive thiolsulfinates/thiolsulfonates, by application of a positive potential difference to the silicon surfaces. Peptide molecules containing thiol groups were successfully immobilized to the electroactivated surfaces. In addition, this new chemical activation method offers the possibility to release the bound molecules in order to regenerate the surfaces. Subsequently, the thiolated surfaces can be reactivated for further use. Since the activated area depends directly on the size of the electrodes used for the oxidation, nanoscale activation of the thiolated surfaces was performed by use of an AFM tip as counter-electrode. Electrooxidized patterns, with a line width ranging from 70 nm to 200 nm, were obtained. A thiol-rich protein, b-galactosidase, was selectively immobilized onto the electroactivated patterns. An electrochemical version of microcontact printing was developed in order to activate large surface areas with micrometer scale patterns. Conductive soft polymer stamps were produced using an evaporated aluminum coating. Patterned electroactivation of thiols was achieved, and polystyrene beads were subsequently specifically immobilized onto the patterns. As a conclusion, these different projects resulted in a strategy enabling the achievement of nanoscale and microscale positioning and immobilization of biomolecules on silicon surfaces, with potential reversibility and reuse of the surfaces.
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A Novel Route for Construction of Multipurpose Receptors through Chemical Modification of Glutathione TransferasesViljanen, Johan January 2008 (has links)
This thesis describes how the human Alpha class glutathione transferase (GST) A1-1 can be reprogrammed either to function as a multipurpose biosensor for detection of small molecule analytes, or as a handle providing for more efficient protein purification. A novel, user-friendly, and efficient method for site-specific introduction of functional groups into the active site of hGST A1-1 is the platform for these achievements. The designed thioester reagents are glutathione-based and they are able to label one single nucleophile (Y9) and leave the other 50 nucleophiles (in hGST A1-1) intact. The modification reaction was tested with five classes of GSTs (Alpha, Mu, Pi, Theta and Omega) and was found to be specific for the Alpha class isoenzymes. The reaction was further refined to target a single lysine residue, K216 in the hGST A1-1 mutant A216K, providing a stable amide bond between the protein and the labeling group. To further improve the labeling process, biotinylated reagents that could deliver the acyl group to Y9 (wt hGST A1-1) or K216 in the lysine mutant, while attached to streptavidin-coated agarose beads, were designed and synthesized. A focused library of eleven A216K/M208X mutants was made via random mutagenesis to provide an array of proteins with altered micro-environments in the hydrophobic binding site, where M208 is situated. Through the invented route for site-specific labeling, a fluorescent probe (coumarin) was introduced on K216 in all double mutants, with the purpose of developing a protein-based biosensor, akin to the olfactory system. The array of coumarin-labeled proteins responded differently to the addition of different analytes, and the responses were analyzed through pattern recognition of the fluorescence signals. The labeled proteins could also be site-specifically immobilized on a PEG-based biosensor chip via the single C112 on the surface of the protein, enabling development of surface-based biosensing systems. Also, a refined system for efficient detection and purification of GST-fusion proteins is presented. Through a screening process involving A216K and all produced A216K/M208X mutants, two candidates (A216K and A216K/M208F) were singled out as scaffolds for the next generation of fusion proteins. In addition to the features present in commercially available GST fusion constructs, the new mutants can be site-specifically labeled with a fluorophore in bacterial lysates providing quick and sensitive monitoring of expression and purification. Furthermore, the proteins could be labeled with a unique aldehyde moiety providing for a novel protein purification scheme.
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Molecularly Imprinted Polymers: Towards a Rational Understanding of Biomimetic MaterialsMolinelli, Alexandra Lidia 22 November 2004 (has links)
The research described in this thesis contributes to the development of new strategies facilitating advanced understanding of the fundamental principles governing selective recognition of molecularly imprinted polymers (MIPs) at a molecular level for the rational optimization of biomimetic materials. The nature of non-covalent interactions involved in the templating process of molecularly imprinted polymers based on the self-assembly approach were investigated with a variety of analytical techniques addressing molecular level interactions. For this purpose, the concerted application of IR and 1H-NMR spectroscopy enabled studying the complexation of the template molecules 2,4-dichlorophenoxyacetic acid, quercetin, and o-, m-, and p-nitrophenol with a variety of functional monomers in the pre-polymerization solution by systematically varying the ratio of the involved components. In aqueous and non protic porogenic solvents, information on the interaction types, thermodynamics, and complex stoichiometry was applied toward predicting the optimum imprinting building blocks and ratios. Molecular dynamics simulations of 2,4-dichlorophenoxyacetic acid and its interactions with the functional monomer 4-vinylpyridine in aqueous and aprotic explicit solvent allowed demonstrating the fundamental potential of computer MD simulations for predicting optimized pre-polymerization ratios and the involved interaction types. The obtained results clearly demonstrate that the application of rapid IR/NMR pre-screening methods in combination with molecular modeling strategies is a promising strategy towards optimized imprinting protocols in lieu of the conventionally applied labor intensive and time-consuming trial-and-error approach. Furthermore, HPLC characterization of the produced MIPs compared to control polymers enabled a systematic approach to imprinting based on advanced understanding of the factors governing the formation of high-affinity binding sites during the polymerization. In addition, the importance of the combination of size, shape, and molecular functionalities for the selective recognition properties of MIPs was investigated. MIPs for the mycotoxins deoxynivalenol and zearalenone and for the antioxidant quercetin were applied as separation materials for advanced sample preparation in beverage analysis. The obtained results demonstrated the potential of MIPs for rapid one-step sample clean-up and pre-concentration from beverages such as wine and beer.
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The "Universal Polymer Backbone" ConceptPollino, Joel Matthew 23 November 2004 (has links)
This thesis begins with a brief analysis of the synthetic methodologies utilized in polymer science. A conclusion is drawn inferring that upper limits in molecular design are inevitable, arising as a direct consequence of the predominance of covalent strategies in the field. To address these concerns, the universal polymer backbone (UPB) concept has been hypothesized.
A UPB has been defined as any copolymer, side-chain functionalized with multiple recognition elements that are individually capable of forming strong, directional, and reversible non-covalent bonds. Non-covalent functionalization of these scaffolds can lead to the formation of a multitude of new polymer structures, each stemming from a single parent or universal polymer backbone.
To prepare such a UPB, isomerically pure exo-norbornene esters containing either a PdII SCS pincer complex or a diaminopyridine residue were synthesized, polymerized, and copolymerized via ROMP. All polymerizations were living under mild reaction conditions. Kinetic studies showed that the kp values are highly dependent upon the isomeric purity but completely independent of the terminal recognition units. Non-covalent functionalization of these copolymers was accomplished via 1) directed self-assembly, 2) multi-step self- assembly, and 3) one-step orthogonal self-assembly. This system shows complete specificity of each recognition motif for its complementary unit with no observable changes in the association constant upon functionalization.
To explore potential applications of this UPB concept, random terpolymers possessing high concentrations of pendant alkyl chains and small amounts of recognition units were synthesized. Non-covalent crosslinking using a directed functionalization strategy resulted in dramatic increases in solution viscosities for metal crosslinked polymers with only minor changes in viscosity for hydrogen bonding motifs. The crosslinked materials were further functionalized via self-assembly by employing the second recognition motif, which gave rise to functionalized materials with tailored crosslinks. This non-covalent crosslinking/functionalization strategy could allow for rapid and tunable materials synthesis by overcoming many difficulties inherent to the preparation of covalently crosslinked polymers.
Finally, the current status of the UPB concept is reviewed and methodological extensions of the concept are suggested. Evaluation of how UPBs may be used to optimize materials and their potential use in fabricating unique electro-optical materials, sensors, and drug delivery vesicles are explored.
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Theoretical Investigations of pi-pi Interactions and Their Role in Molecular RecognitionSinnokrot, Mutasem Omar 07 July 2004 (has links)
Noncovalent interactions are of pivotal importance in many areas of chemistry, biology, and materials science, and the intermolecular interactions involving aromatic rings in particular, are fundamental to molecular organization and recognition processes. The work detailed in this thesis involves the application of state-of-the-art ab initio electronic structure theory methods to elucidate the nature of pi-pi interactions. The binding energies, and geometrical and orientational preferences of the simplest prototype of aromatic pi-pi interactions, the benzene dimer, are explored. We obtain the first converged values of the binding energies using highly accurate methods and large basis sets. Results from this study predict the T-shaped and parallel-displaced configurations of benzene dimer to be nearly isoenergetic.
The role of substituents in tuning pi-pi interaction is investigated. By studying dimers of benzene with various monosubstituted benzenes (in the sandwich and two T-shaped configurations), we surprisingly find that all of the substituted sandwich dimers considered bind more strongly than benzene dimer. We also find that these interactions can be tuned by a modest degree of substitution. Energy decomposition analysis using symmetry-adapted perturbation theory (SAPT) reveals that models based solely on electrostatic effects will have difficulty in reliably predicting substituent effects in pi-pi interactions.
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Biologische Verfügbarkeit des Zytokins Leukemia inhibitory factor nach kovalenter Ankopplung an Polymeroberflächen / Bioavailability of cytokine leukemia inhibitory factor covalently bound to polymer surfacesAlberti, Kristin 10 February 2011 (has links) (PDF)
Für medizinische Anwendungen sind Stammzellen aufgrund ihrer Eigenschaften (Selbsterneuerung, hohe Proliferationsrate und Differenzierungsmöglichkeit in verschiedene Zelltypen) beispielsweise in den Bereichen des regenerativen Gewebeersatzes und der Zelltherapie sehr interessant. In vivo umgibt die Stammzellen eine definierte Mikroumgebung, die sie unterstützt sich zu teilen, ihren undifferenzierten Status aufrecht zu erhalten und Tochterzellen für das Wachstum, die routinemäßige Erneuerung oder den Ersatz von Gewebe zu produzieren. Diese Mikroumgebungen werden als Stammzellnischen bezeichnet. Für die Kultivierung von Stammzellen in vitro muss die in vivo-Situation möglichst getreu nachgestaltet werden. Ziel der Forschung ist die Schaffung einer künstlichen Umgebung, die sowohl die funktionellen Eigenschaften einer Nische besitzt als auch frei von Risiken xenogener Pathogene oder Gewebeunverträglichkeiten für die Anwendung am humanen Organismus eingesetzt werden kann. Einen Ansatz dafür bietet beispielsweise die Kopplung von Faktoren, die für den Erhalt der Stammzelleigenschaften notwendig sind, an synthetische Oberflächen.
Ausgehend vom Bedarf an Kultur- oder Modellsystemen für die Expansion von (embryonalen) Stammzellen sollte in dieser Arbeit analysiert werden, ob alternierende Maleinsäureanhydrid (MA)-Copolymere ein geeignetes Trägersystem für die biofunktionelle kovalente Immobilisierung spezifischer Zytokine sind und dadurch unter anderem als künstliche Stammzellnische Anwendung finden können. MA-Copolymere eignen sich aufgrund ihrer spontanen Reaktion mit Aminogruppen für die Immobilisierung von Proteinen.
Das Zytokin LIF (Leukemia inhibitory factor) existiert in vivo auch in immobilisierter Form und ist in embryonalen Mausstammzellen (mESC) allein in der Lage, das Stammzellpotential dieser Zellen zu erhalten. Aus diesem Grund ist LIF für die Analyse der Aufgabenstellung geeignet. Nach der Charakterisierung LIF-modifizierter Oberflächen wurde die biologische Verfügbarkeit des kovalent immobilisierten Zytokins mit Hilfe von LIF-sensitiven Fibroblasten und mESC der Linie R1 überprüft. Anschließend wurde im Mausmodell in vivo der Erhalt der Pluripotenz der mESC durch immobilisiertes LIF analysiert. Dafür standen die Oberflächen Poly(ethylen-alt-maleinsäureanhydrid) (PEMA) und Poly(octadecen-alt-maleinsäureanhydrid) (POMA) jeweils ohne und mit Polyethylenglykol (PEG7)-Modifizierung zur Verfügung, an die LIF kovalent gekoppelt wurde. Zusätzlich wurde LIF physisorptiv an einer Kollagen-Fibronektin-Matrix über hydrolysiertem POMA immobilisiert.
Mit Hilfe von radioaktiv markiertem LIF konnte gezeigt werden, dass die Gesamtbeladungsmenge mit Zytokin von den Eigenschaften der MA-modifizierten Träger abhing. Auf PEMA konnten mit steigenden Immobilisierungskonzentrationen höhere Belegungsdichten an der Oberfläche erreicht werden, die im analysierten Bereich eine lineare Abhängigkeit zeigten. Aufgrund der starken Quellung in wässrigen Lösungen war eine Einlagerung von LIF-Molekülen in die Polymerschicht möglich und führte bei hohen Immobilisierungskonzentrationen auch nach 3 Tagen Inkubation mit proteinhaltigem Medium noch zur Verdrängung nicht kovalent gebundener Zytokinmoleküle aus PEMA-Oberflächen. Obwohl ein Teil des LIF in die Polymerschicht eindrang, war der Großteil der Moleküle für einen spezifischen Antikörper zugänglich. Hydrophobe Oberflächen mit POMA konnten bei hohen Immobilisierungskonzentrationen weniger LIF binden und zeigten Sättigungsverhalten der Oberflächen bei einer Belegungsdichte von 178 ng/cm^2 LIF. Eine Freisetzung von LIF nach mehr als 3 Tagen konnte nicht beobachtet werden. Gleichzeitig war hier aufgrund der hydrophoben Polymerseitenketten die Antikörperzugänglichkeit deutlich reduziert. Wegen des geringen Quellungsverhaltens von POMA in wässrigen Lösungen konnte eine Einlagerung des immobilisierten Zytokins in die Polymerschicht aber ausgeschlossen werden.
Die kovalente LIF-Immobilisierung über PEG7-Spacer führte im Vergleich zu den nicht PEG-modifizierten Oberflächen PEMA und POMA zu jeweils geringeren Belegungsdichten, ohne dabei den Charakter der Abhängigkeit von der Immobilisierungskonzentration zu verändern (linear für PEMA+PEG7, Sättigung für POMA+PEG7). Die schlechte Antikörperzugänglichkeit von immobilisiertem LIF auf POMA konnte durch die Einführung des PEG7-Spacers deutlich verbessert werden und erreichte einen Wert ähnlich dem der hydrophilen PEMA-Oberflächen. Kovalent immobilisiertes LIF zeigte auf den vier MA-Oberflächen homogene und definiert einstellbare Belegungsdichten auf den einzelnen Proben.
Die physisorptive Immobilisierung von LIF an extrazelluläre Matrixkomponenten auf hydrolysiertem POMA führte zu inhomogenen und bereits bei geringen Immobilisierungskonzentrationen instabilen Belegungsdichten. Die Einstellung definierter Belegungsdichten und die homogene Verfügbarkeit des Zytokins sind für die spätere Anwendung bei der Kultivierung wichtig, da so allen Zellen die gleiche definierte Zytokindosis unabhängig von der Oberflächencharakteristik präsentiert wird und Populationsunterschiede vermieden werden.
LIF-sensitive Mausfibroblasten der Linie NIH3T3 reagierten auf immobilisiertes LIF mit der Aktivierung des Signalwegproteins STAT3. Durch den direkten Vergleich von STAT3-Aktivierungsprofilen nach Stimulation mit gelöstem oder immobilisiertem LIF konnte gezeigt werden, dass durch beide Präsentationsformen innerhalb der ersten 15 Minuten nach Stimulationsbeginn eine starke Aktivierung von STAT3 erfolgt, die anschließend wieder abklingt. Die Profile beider Präsentationsformen unterschieden sich in ihren Intensitäten nur bei der starken STAT3-Aktivierung. Dabei ergaben sich bei gelöstem LIF aufgrund der größeren Kontaktfläche mit Zytokin (gesamte Zelloberfläche) etwas stärkere Aktivierungen. Durch die sehr ähnlichen Aktivierungsprofile konnte nachgewiesen werden, dass das Zytokin LIF für Zellen zugänglich an MA-Copolymere mit und ohne Spacer-Modifizierung immobilisiert werden kann. Dabei lag ein Teil der Moleküle in einer Konformation und Orientierung gebunden vor, die die Funktionalität des Zytokins erhalten konnten. Zwischen den Oberflächen mit kovalenter LIF-Immobilisierung konnten keine wesentlichen Unterschiede in der STAT3-Aktivierung festgestellt werden. LIF war an all diesen Oberflächen für die LIF-sensitiven NIH3T3 Mausfibroblasten biologisch verfügbar.
LIF-abhängige embryonale Mausstammzellen (mESC) reagierten nach 72 Stunden LIF-Stimulation mit der Aktivierung von STAT3. Bei Belegungsdichten ab 8 ng/cm^2 kovalent immobilisiertem LIF auf POMA mit und ohne PEG7-Spacer konnten ähnliche Aktivierungen wie durch die Stimulation mit gelöstem LIF festgestellt werden. Dies bestätigte die biofunktionelle LIF-Immobilisierung. Zwischen den POMA-Oberflächen mit und ohne PEG7 war dabei kein deutlicher Unterschied erkennbar. Eine reduzierte Zugänglichkeit des Antikörpers auf POMA beeinflusste demnach die biologische Verfügbarkeit des Zytokins für die mESC nicht. Der Erhalt des Stammzellpotentials durch kovalent an POMA gebundenes LIF konnte in vitro durch die Präsenz von Oct4 im Zellkern der mESC nachgewiesen werden. Durch die instabile Immobilisierung bei physisorptiver Assoziation des Zytokins an Matrixkomponenten über hydrolysiertem POMA reduzierte sich der Erhalt des Stammzellpotentials auf diesen Oberflächen stark. Kovalent immobilisiertes LIF dagegen konnte auch während der Kultur über mehrere Passagen hinweg die Pluripotenz der murinen ESC erhalten. Nach der Fusion mit Blastozysten beteiligten sich diese kultivierten Zellen in vivo erfolgreich an der Bildung von Chimären. Dabei konnten keine Unterschiede der Chimärenhäufigkeit zwischen der Kultivierung der mESC mit gelöstem oder kovalent an POMA immobilisiertem LIF festgestellt werden. Kovalent an MA-Copolymere immobilisiertes LIF ist demnach in der Lage, gelöstes LIF vollständig zu ersetzen und über mehrere Passagen hinweg allein das Stammzellpotential von mESC zu erhalten.
Die Experimente zeigten, dass sich MA-Copolymere für die funktionelle kovalente Immobilisierung von Signalmolekülen eignen. Dabei konnten keine starken Unterschiede bei der Reaktion der Zellen auf die Oberflächen PEMA oder POMA festgestellt werden. Auch die Einführung eines zusätzlichen Spacers war für die Signaltransduktion nach Stimulation mit kovalent immobilisiertem LIF nicht notwendig. Für künftige Arbeiten zur kovalenten Immobilisierung von LIF an MA-Copolymeren ist deshalb aus Stabilitäts- und Effizienzgründen die Oberfläche POMA zu bevorzugen. Diese Favorisierung kann jedoch aufgrund der unterschiedlichen Tertiärstruktur anderer Proteine und ihrer verschiedenen Steifigkeiten sowie bei der Verwendung anderer Zelltypen nicht automatisch für ein anderes Modellsystem übernommen werden. Die Verwendung hydrophiler Oberflächen oder die Kopplung über Spacer sollte demnach in Abhängigkeit vom zu immobilisierenden Protein und den auszusiedelnden Zellen geprüft werden. Die vorgestellte Kopplungsmethode umgeht die Modifikation des Proteins sowie Behandlungen zur Vernetzung des Zytokins. Die Immobilisierungsreaktion ist bei Raumtemperatur und Umgebungsdruck sowie unter sterilen Bedingungen durchführbar. Immobilisierte Zytokine werden homogen kovalent an der Oberfläche gebunden und sind dort für die Zellen zugänglich. Außerdem ermöglicht die Einstellung definierter Belegungsdichten die gezielte Applikation von Zytokindosen. MA-Copolymere sind somit nicht nur für die Kultivierung von Stammzellen unter Erhaltung des Stammzellstatus einsetzbar, sondern eignen sich auch für Differenzierungsstudien.
Teilergebnisse dieser Arbeit wurden publiziert unter
K. Alberti, R.E. Davey, K. Onishi, S. George, K. Salchert, F.P. Seib, M. Bornhäuser, T. Pompe, A. Nagy, C.Werner, and P.W. Zandstra. Functional immobilization of signaling proteins enables control of stem cell fate. Nat Methods, 5(7):645–650, Jul 2008 und
T. Pompe, K. Salchert, K. Alberti, P.W. Zandstra, and C. Werner. Immobilization of growth factors on solid supports for the modulation of stem cell fate. Nat Protocols, 5(6):1042–1050, Jun 2010. / In vitro cultivation of (embryonic) stem cells requires a defined environment. Together different properties as cytokine supplement, extracellular matrix composition or topographic design can mimic this stem cell niche in an artificial system. For mouse embryonic stem cells the cytokine leukemia inhibitory factor (LIF) is able to keep those cells in undifferentiated state and to enhance self renewal without the supplement of other factors. In vivo LIF exists in both diffusible and extracellular matrix immobilized form. This work investigates whether LIF can be immobilized covalently to alternating maleic anhydride (MA)-copolymers in a functional manner. When bioavailable, covalently immobilized LIF should be able to interact with specific cytokine receptor subunits and provide information to keep murine embryonic stem cells in a pluripotent state.
In aqueous solution with neutral pH (such as phosphate buffered saline, PBS) and ambient temperature and pressure MA-copolymers react spontaneously with aminogroups and therefore represent a useful support for covalent protein immobilization. Depending on the choice of co-monomer, properties of copolymer vary: ethylene results in hydrophilic poly-(ethylene-alt-maleic anhydride) (PEMA), octadecene in more hydrophobic poly-(octadecene-alt-maleic anhydride) (POMA). LIF can be covalently immobilized onto the MA-copolymers as shown by radiolabeling experiments. The amount of cytokine coupled to PEMA increased linear whereas on POMA saturation could be observed for higher concentrations. A subsequent coupling of a polyethylene glycol spacer (PEG7) further modified the properties and led to more hydrophilic surfaces. The amount of LIF per area decreased in comparison to MA-copolymers without the spacer but the graph characteristics remained unaltered (linear for PEMA+PEG7, saturation for POMA+PEG7). During the first three days in buffer solution supplemented with bovine serum albumin, unbound LIF was displaced and the amount of immobilized cytokine remained stable. This Stability after preincubation allowed to immobilize required amounts of LIF per area. Although hydrophilic surfaces with PEMA showed swelling behavior resulting in increased layer thickness after incubation in PBS, accessibility to LIF for an antibody was not impaired. The amounts per area detected by radiolabeling method and using the antibody were similar and indicated that LIF was not covered by copolymers. For cell culture addition of diffusible as well as immobilized growth factors or cytokines requires dosage control. Frequently it is necessary to provide homogeneous distribution of the factor of interest. In the present study analysis by fluorescence microscopy confirmed homogeneity for surfaces with covalently immobilized LIF (iLIF) but not for LIF physisorbed to extracellular matrix components collagen type I and fibronectin.
LIF transduces signals via the JAK/STAT pathway. Preliminary experiments with LIF-sensitive fibroblasts showed similar activation of STAT3 after stimulation with immobilized or diffusible LIF. The results of STAT3 activation revealed an activation profile with high intensities within the first 15 minutes for both immobilized and diffusible LIF followed by decrease. STAT3 activation profiles were similar on different surfaces and independent of LIF presentation mode. These results revealed that fibroblasts could recognize covalently immobilized LIF onto MA-copolymers and were able to activate STAT3. In the absence of LIF mESC start to differentiate within 24 to 36 hours and loose their pluripotency. To confirm the functional immobilization of LIF mouse embryonic stem cells (mESC) were cultivated on iLIF-modified POMA or POMA+PEG7 surfaces for 72 hours and stained for activated STAT3. Results showed a dose-dependent activation increasing with the iLIF amount per area. Higher amounts (8 and 75 ng/cm^2) of iLIF activated STAT3 similar to 10 ng/ml diffusible LIF. Introduction of PEG7 spacer did not further increased STAT3 activation. Both, the amount of ESC marker Oct4 and the percentage of Oct4-positive cells increased with higher amounts of iLIF and showed similar results as obtained with 10 ng/ml diffusible LIF. Murine ESC cultivated on LIF physisorbed to matrix components expressed similar amounts of transcription factor Oct4 compared to unstimulated cells. STAT3 activation and Oct4 expression in the absence of diffusible cytokine indicated a functional covalent immobilization of LIF. To confirm the pluripotency, mESC were stimulated for 6 to 8 subcultures only with iLIF, cell aggregates were fused with mouse embryos and implanted in pseudopregnant surrogate mothers. Three weeks after birth the contribution of mESC aggregates to chimera was evaluated. ESC stimulated with iLIF only contributed to chimera formation with around the same frequency as mESC cultivated with 10 ng/ml diffusible LIF. Thus, iLIF maintained pluripotency of mESC during in vitro expansion and could replace diffusible LIF.
As shown by the experiments, MA-copolymers provide a support to covalently immobilize cell signaling molecules in a functional manner. This method of coupling does not need any protein modification or cross-linking treatment after protein incubation. Reaction can be carried out under sterile conditions at ambient temperature and pressure. The immobilized ligand is distributed equally on the supporting copolymer and the adjustment of required ligand amounts is possible. These properties characterize MA-copolymers as a suitable support to immobilize cell signaling molecules not only for keeping the stem cell fate but also for differentiation studies.
Parts of this work were published:
K. Alberti, R.E. Davey, K. Onishi, S. George, K. Salchert, F.P. Seib, M. Bornhäuser, T. Pompe, A. Nagy, C.Werner, and P.W. Zandstra. Functional immobilization of signaling proteins enables control of stem cell fate. Nat Methods, 5(7):645–650, Jul 2008.
T. Pompe, K. Salchert, K. Alberti, P.W. Zandstra, and C. Werner. Immobilization of growth factors on solid supports for the modulation of stem cell fate. Nat Protocols, 5(6):1042–1050, Jun 2010.
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