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In the present study, information concerning morphology, ecology, fertilization and larval development of three sympatric species of Eusonus is presented. Morphological similarities are reviewed in part I. These similarities correspond with significant lack of variation found in larval development (part IV). Despite these similarities, as well as the ability to cross fertilize their species, the ecological and reproductive isolating mechanisms presented in part II and II provide a positive indication of the existence of three biologically distinct species. A comparative discussion reviews the efficacy of morphological criteria in differentiating the three closely related Euzonus species.

Thesis (MPhil (Animal Sciences. Aquaculture))--University of Stellenbosch, 2006. / T. heterouncinata is a sabellid polychaete endemic to South Africa and found primarily in the shells of the abalone Haliotis midae. With the intensification of abalone aquaculture around the world, T. heterouncinata has become a problematic pest by causing shell deformities, reducing abalone growth rates and, in some instances, high abalone mortalities. The problem of this sabellid was first noticed in Californian in the early 1980’s in Red abalone (Haliotis rufescens) production facilities. Many mitigation methods have been tested over the years and this paper investigates another two methods; a reduction in particulate load in the tank to reduce the food source of the sabellid which perhaps will reduce fecundity, and to use ultrasound as a possible mitigation method. This study found that filtration and reduction in suspended particles did not have a significant effect, but that ultrasound did have a significant effect in reducing T. heterouncinata populations.

The ability to accurately identify species is fundamental to ecological research and environmental monitoring. Current taxonomic identifications often rely on differentiation of morphologically ambiguous characters, and a process of categorization which is tedious and often leads to misidentifications. This is compounded by the presence of cryptic taxa, which may be prevalent among Polychaete worms (Polychaeta: Annelida). With increased access to genetic techniques, Cytochrome c oxidase subunit I has been suggested as a possible aid to assist in the discrimination of species resources. In this study, I tested the hypothesis that the mtDNA COI gene locus is effective in discriminating morphologically recognised species of Polychaete worms. A 543 base-pair fragment of the COI locus was successfully extracted for 111 individuals from 16 out of 20 morphologically recognised species. Average intraspecific divergences were 0.8 %, ranging from 0 % to 5 %. Average interspecific variation was 26.4 %, ranging from 13.8 % to 36.8 %. The lowest divergences were found between two Nereid species (13.8 %), and two Glycera americana species (17.2 %). Relatively high maximum divergences of over 30 % suggest that some species may have reached a divergence saturation level, which may partially explain why familial groupings in constructed trees were not monophyletic. Divergences within the different Nereid species - a group previously known to have morphologically cryptic species - did not reveal the presence of any cryptic taxa. Pairwise comparisons showed a clear divide between percentages of intra- and interspecific divergences, and the suggested threshold of 11 % is effective for the taxa investigated here. On the basis of these results, I conclude that sequence variation in the mtDNA COI gene locus is effective in discriminating morphologically recognised species of Polychaete worms, but may not be appropriate for deeper (e.g. generic or familial) phylogenetic relationships among taxa.

Polychaetes are important components of the intertidal sandflat community in Lawson’s Flat, Dillon Beach, California. Little is known about the factors that control the relative abundance of these species. In view of the extensive evidence of the importance of interactions between component species in intertidal communities it is of interest to obtain information that would facilitate future experimental work of such interactions. This study documents seasonal changes in the abundance of the polychaete component of the intertidal community. Attention is directed at possible factors that might affect seasonal changes in distribution. A major finding is that certain herbivorous polychaetes exhibit seasonal fluctuations in abundance that appear to be correlated with changes in algal cover. These findings might suggest more detailed future experimentation. Some aspects of recruitment of major species are considered and the presence of a parasite in one of the species is noted. Aspects of benthic community ecology are discussed.

In dieser Arbeit wurde die progenetische Evolution der Dinophilidae innerhalb der Eunicida („Polychaeta“, Annelida) sowie der Ursprung weiterer vermutlich progenetischer Arten des Euniciden-Taxons „Dorvilleidae“ (Parapodrilus psammophilus und Microdorvillea sp. n.) mit Hilfe molekularer Daten untersucht. Ein etwa 1800 bp langer Abschnitt der 18S-rDNA wurde erfolgreich von den in Tabelle 1 aufgeführten Arten (s. S. 5-7), mit Ausnahme von Ophryotrocha puerilis und Pusillotrocha akessoni, sequenziert. Von der 28S-rDNA wurde ein etwa 2250 bp langer Abschnitt von Trilobodrilus heideri, Protodorvillea kefersteinii, Eunice sp. und Hyalinoecia tubicola sequenziert. Von den folgenden Arten wurden 488 bzw. 482 bp der CO I bestimmt: Rheomorpha neiswestonovae, Trilobodrilus axi, Trilobodrilus heideri, Ophryotrocha gracilis, Ophryotrocha puerilis, Protodorvillea kefersteinii, Schistomeringos rudolphi, Eunice sp., Marphysa sanguinea, Lumbrineris funchalensis, Hyalinoecia tubicola, Potamodrilus fluviatilis und Sabella crassicornis. Zusätzliche Sequenzen der 18S-rDNA, der 28S-rDNA und der CO I wurden der Datenbank GenBank entnommen. Weitere Sequenzen der 28S-rDNA und der CO I wurden freundlicherweise von Frau Jördens zur Verfügung gestellt. Vor den phylogenetischen Analysen wurden Bereiche unterschiedlicher Variabilität definiert. Unterschiede zwischen den Substitutions-, Transitions-, Transversions- und allgemeinen Mutationsraten sowohl untereinander als auch zwischen den Variabilitätsbereichen sowie Sättigungen wurden ermittelt. Das phylogenetische Signal wurde mittels Likelihood Mapping verdeutlicht. Phylogenetische Analysen der einzelnen Gene sowie in Kombination der beiden nukleären ribosomalen Gene und aller drei Gene wurden durchgeführt. Dabei wurden die Parsimonie-, die ML- und die Bayes´sche Analyse parallel angewendet. Soweit möglich wurden Signifikanztests durchgeführt. Die zum einen die beiden Hypothesen der Monophylie der Eunicida mit und ohne Dinophilidae gegeneinander und zum anderen die beste Lösung gegen diese beiden Hypothesen und die Hypothese einer Monophylie der Taxa der ehemaligen „Archiannelida“ verglichen. Die Voruntersuchungen an den Datensätzen der einzelnen Gene zeigen bei den drei Genen deutliche Unterschiede der Substitutionsraten sowohl zwischen den einzelnen Variabilitätsbereichen als auch untereinander. Die Muster in den beiden Genen der 28S‑rDNA und der 18S-rDNA sind sich relativ ähnlich, allerdings ist die 28S‑rDNA variabler. Die CO I unterscheidet sich deutlich von den beiden anderen Genen in ihrem Muster und in ihrer Variabilität. Es wurde in allen drei Analysen Substitutionsmodelle gewählt die diese Unterschiede adäquat berücksichtigten. In der ML- und der Bayes´schen Analyse wurden die Modelle mittels dem Programm Modeltest bzw. MrModeltest bestimmt. In den Analysen der einzelnen Gene zeichnet sich die 18S-rDNA für diese Fragestellungen durch die beste Auflösung aus. Dieses ist auf die niedrige Variabilität sowie die große Anzahl an OTUs zurückzuführen. Die 28S-rDNA ist in der Auflösung wesentlich besser als die CO I und etwa so gut wie die 18S-rDNA. Die CO I alleine ist für Fragestellungen, die die Phylogenie der höheren taxonomischen Einheiten der Polychaeten betreffen, nicht geeignet. Die Kombination meherer Gene führte ebenfalls zu einer Verbesserung der Auflösung. Dabei wird die Auflösung mit steigender Zahl der Gene besser. Auch in diesen Analysen unterstützen die „posterior probabilities“ mehr Gruppen mit signifikanten Werten und sind immer höher als die BS-Werte. Es konnte gezeigt werden, dass die Verwendung der besten Phylogenie der ML-Analyse als Startbaum in der Bayes´schen Analyse schneller und sicherer ins stabile optimale Gleichgewicht führt. Es wird daher empfohlen, diese Option wenigstens als Test für die Etablierung des stabilen optimalen Gleichgewichtes in zukünftigen Analysen zu verwenden. Die molekularen Daten lehnen eine nähere Verwandtschaft der Dinophilidae zu den Eunicida sowie zu den Taxa der ehemaligen „Archiannelida“ mit hoher Wahrscheinlichkeit, allerdings nicht signifikant, ab. Eine mögliche Verwandtschaft zu einem in die Analysen nicht eingegangenem Taxon der Eunicida kann nicht ausgeschlossen werden, da die Monophylie der Eunicida nur in den Analysen aller drei Gene bestätigt wird. Ebenfalls kann eine nähere Verwandtschaft der Dinophilidae zu einem anderen Taxon der „Polychaeta“ nicht mit signifikanter Unterstützung nachgewiesen werden. Da weder die molekularen noch die morphologischen Daten zurzeit eine eindeutige systematische Einordnung der Dinophilidae innerhalb der „Polychaeta“ erlauben, sollten die Dinophilidae wieder als eigenständiges Taxon innerhalb der „Polychaeta“ geführt und keinem anderen Taxon zugeordnet werden. Der progenetische Urspung der Dinophilidae ist aufgrund morphologischer Untersuchungen gut belegt. Die enge Verwandtschaft sowohl von Parapodrilus psammophilus als auch Microdorvillea sp. n. zu großen kiefertragenden Dorvilleiden mit polytrochen Larven wird mit signifikanten Werten in allen Analysen unterstützt. Die molekularen Daten unterstützen somit die vermutete progenetische Evolution von wenigstens Parapodrilus psammophilus. Dadurch dass die Dinophilidae mit hoher Wahrscheinlichkeit nicht in die „Dorvilleidae“ oder Eunicida eingeordnet werden können, ist auch die systematische Einordnung der Gattungen ohne muskulöses Pharynx-Organ (Apodotrocha und Apharyngtus) in die „Dorvilleidae“ nicht mehr mit eindeutiger Sicherheit gegeben. Sie wurden aufgrund der gleichen morphologischen Merkmale wie die Dinophilidae den „Dorvilleidae“ zu geordnet. Die molekular-phylogenetischen Analysen unterstützen nur in den kombinierten Analysen aller drei Gene die Monophylie der Eunicida. Dieser ist wahrscheinlich auf die „explosive Radiation“ dieses Taxons sowie der Taxa der Polychaeten im Allgemeinen zurückzuführen. Die nahe Verwandtschaft von Eunicidae und Onuphidae wird in allen Analysen, außer in denen mit der CO I, signifikant unterstützt. Die molekularen Daten unterstützen eine Monophylie der „Dorvilleidae“ nicht. Da der ctenognathe Kieferapparat der „Dorvilleidae“ sehr wahrscheinlich ein plesiomorphes Merkmal innerhalb der Eunicida ist, wird das Taxon auch morphologisch durch kein autapomorphes Merkmal charakterisiert. Die „Dorvilleidae“ sollten deshalb als parapyhletisch innerhalb der Eunicida betrachtet werden und mit Anführungsstrichen geführt werden. Die systematische Position der Histriobdellidae innerhalb der Eunicida kann basierend auf den Analysen der 18S-rDNA nicht eindeutig geklärt werden. Allerdings legt die Analyse, die eine Monophylie der Eunicida ohne Dinophilidae erzwingt, eine Verwandtschaft mit Ophryotrocha gracilis nahe. Zukünftige molekular-phylogenetische Analysen sowohl die Phylogenie der Annelida und im Besonderen der Eunicida als auch die systematische Einordnung der Dinophilidae betreffend sollten vor allem bei den Genen der 28S-rDNA und CO I noch mehr Taxa und Arten umfassen, um der geringen Auflösung der basalen Verzweigungen in allen Analysen und Problemen wie der „long branch attraction“ in zwei der Analysen mit der 28S-rDNA besser zu begegnen. Ferner sollte der Datensatz noch um andere Gene, wie zum Beispiel dem Elongationsfaktor 1a oder den Histonen, mit einer möglichst großen Zahl an Taxa erweitert werden.

Submitted by (edna.saturno@ufrpe.br) on 2017-02-20T13:11:23Z No. of bitstreams: 1 Robson Tavares Barbosa.pdf: 4522145 bytes, checksum: 55ba3289221c88cade2ebcf2ee0896bc (MD5) / Made available in DSpace on 2017-02-20T13:11:23Z (GMT). No. of bitstreams: 1 Robson Tavares Barbosa.pdf: 4522145 bytes, checksum: 55ba3289221c88cade2ebcf2ee0896bc (MD5) Previous issue date: 2012-02-28 / This study evaluated the profiles of seasonal diets of Eugerres brasilianus and Diapterus rhombeus, and food overlap between these species caught in the channel of Santa Cruz, located on the northern coast of the Pernambuco state, from June 2010 to May 2011. The goal was to provide input as a basis for studies aimed at the sustainable use and cultivation of these species. To understand their eating habits, we analyzed 837 individuals of both species, 567 species of E. brasilianus and 270 species of D. rhombeus, which, through its degree of fullness, frequency of occurrence, frequency number and index of food importance, we could verify their diets. As for the evaluation of overlapping niches, we used the Morisita-Horn index and multivariate analysis (Euclidean Distance). The two species have a very diverse food spectrum with high niche overlap (0.97). The most consumed item by both was Polychaeta, item with more than 75% of important food for both species. Bivalvia and Decapoda, were the most consumed by E. brasilianus item after the Polychaeta, with peak consumption during the year. While, for D. rhombeus, the most consumed items after the item Polychaeta were Amphipoda and Stomatopoda. The two species, as well as most individuals Gerreidae family, can be considered generalists because they present a wide food spectrum, opportunistic taking advantage of food in abundance in the environment, and omnivores with a preference for benthic invertebrates, especially polychaetes. / Neste trabalho foram avaliados os perfis sazonais das dietas de Eugerres brasilianus e Diapterus rhombeus, e, a sobreposição alimentar entre estas espécies capturadas no canal de Santa Cruz, localizado no litoral norte do estado de Pernambuco, no período de junho de 2010 a maio de 2011. Teve como objetivo fornecer subsídios que sirvam de base para estudos voltados para o cultivo e uso sustentável destas espécies. Para entender seus hábitos alimentares, foram analisados 837 indivíduos das duas espécies, 567 da espécie E. brasilianus e 270 da espécies D. rhombeus, dos quais, através do seu grau de repleção, freqüência de ocorrência, freqüência numérica e índice de importância alimentar, pôde-se verificar suas dietas. Já para a avaliação da sobreposição de nichos, utilizou-se o índice de Morisita-Horn e análise multivariada (Distância Euclidiana). As duas espécies apresentaram um espectro alimentar bastante variado com alta sobreposição de nichos (0,97). O item mais consumido por ambas foi o item Polychaeta, com mais de 75% de importância alimentar para ambas as espécies. Decapoda e Bivalvia, foram os itens mais consumidos por E. brasilianus depois do item Polychaeta, apresentando picos de consumo durante o ano. Enquanto que, para D. rhombeus, os itens mais consumidos após o item Polychaeta, foram Amphipoda e Stomatopoda. As duas espécies, assim como a maioria dos indivíduos da família Gerreidae, podem ser consideradas generalistas, por apresentarem um variado espectro alimentar, oportunistas por se aproveitarem do alimento em abundância no ambiente, e, onívoras com preferência para invertebrados bentônicos, especialmente para poliquetas.

Submitted by Edisangela Bastos (edisangela@ufpa.br) on 2012-06-04T13:48:43Z No. of bitstreams: 2 Dissertacao_BiologiaReprodutivaSabellaria.pdf: 2745969 bytes, checksum: 0c3c913bd757fa1c9f88cc70a57b74bd (MD5) license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) / Approved for entry into archive by Edisangela Bastos(edisangela@ufpa.br) on 2012-06-04T13:49:19Z (GMT) No. of bitstreams: 2 Dissertacao_BiologiaReprodutivaSabellaria.pdf: 2745969 bytes, checksum: 0c3c913bd757fa1c9f88cc70a57b74bd (MD5) license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) / Made available in DSpace on 2012-06-04T13:49:19Z (GMT). No. of bitstreams: 2 Dissertacao_BiologiaReprodutivaSabellaria.pdf: 2745969 bytes, checksum: 0c3c913bd757fa1c9f88cc70a57b74bd (MD5) license_rdf: 23898 bytes, checksum: e363e809996cf46ada20da1accfcd9c7 (MD5) Previous issue date: 2011 / CAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / O Polychaeta Sabellaria wilsoni ocorre a partir do Golfo do México até a Argentina, e constrói recifes de areia da zona intertidal até 25 m de profundidade. Esses recifes desempenham um papel importante na estruturação e funcionamento dos ecossistemas de praias arenosas na Costa da Amazônia. Este trabalho estudou a biologia reprodutiva de S. wilsoni na Ilha de Algodoal (PA, Brasil), descrevendo proporção entre os sexos, o processo gametogénicos e o período de reprodução. A amostragem ocorreu mensalmente entre maio de 2008 e abril de 2009. No laboratório 100 indivíduos foram escolhidos aleatoriamente e medidos (comprimento total - a partir do opérculo até o início do funil anal), e destes, 20 foram preparados para estudo histológico. As lâminas foram observadas em microscópio óptico para descrever estruturas reprodutivas, e para determinar o sexo e estágio de maturação. O tamanho dos organismos variou de 4,5 ± 1,89 milímetros para 11,5 ± 2,83 mm, com as fêmeas maiores e mais numerosas do que os machos (razão sexual 0.6:1 - M: F). Os gametas femininos se desenvolvem nas projeções dos vasos sanguíneos e são posteriormente liberadas no celoma. Nos machos a espermatogênese é associada aos septos intersegmentares, e o esperma é liberado no celoma. Gametas são liberados no meio externo por meio de nefrídios e a fecundação é externa. A reprodução ocorre durante todo o ano com picos em setembro-novembro e março-abril. Mas o principal fator para reprodução, é um aumento na hidrodinâmica em agosto, como uma adaptação do Polychaeta para a destruição de recifes futuro, que ocorre entre outubro e novembro, e um aumento de espaço disponível para a colonização, depois da destruição de recifes. / The Polychaeta Sabellaria wilsoni occurs from the Gulf of Mexico to Argentina, building sandy reefs from the intertidal zone to 25 m depth. These reefs play an important role in structuring and functioning of sandy beach ecosystems in the Amazon Coast. This work studied the reproductive biology of S. wilsoni in Algodoal Island (PA, Brazil), describing sex ratio, gametogenic process and breeding period. Sampling occurred monthly between May 2008 and April 2009. In the laboratory 100 individuals were randomly chosen and measured (total length – from the operculum to the beginning of the anal funnel); and from these, 20 specimens were prepared for histological studies. Slides were observed under optical microscope to describe reproductive structures, and to determine sex and maturation stage (based on a four grade scale). The size of organisms ranged from 4.5 ± 1.89 mm to 11.5 ± 2.83 mm, with females larger and more numerous than males (sex ratio 0.6:1 - M:F). Female gametes develop on projection of blood vessels and are subsequently released into the coelom. In males spermatogenesis is associated with intersegmental septa wall, and sperm is released into the coelom. Gametes are released to the environment through nephridia and fertilization is external. Reproduction occurs all year round with peaks on September-November and March-April. The main cues to reproduction are an increase in hydrodynamics on August, as an adaptation of the Polychaeta to the future reef destruction, which occurs between October and November; and an increase of space available for colonization, after the reef destruction.

[Truncated abstract] In my study of Australonereis ehlersi and Simplisetia aequisetis [Polychaeta: Nereididae] from the Swan River Estuary, Western Australia, I assessed the life history, geographical population structure and production of both species, then measured their roles in microbial denitrification and nitrogen cycling within the sediments of the estuary. Both species exhibit a mean life-span of approximately 1 year, a production:biomass turnover rate of about 3 and potentially are capable of reproducing throughout the year, peaking during winter to spring. A. ehlersi exhibited a marine euryhaline distribution, occurring only in the main basin and lower estuary, typically at a very low density of adults; S. aequisetis exhibited a euryhaline distribution, occurring estuary-wide during both summer and winter. High density and biomass of A. ehlersi occurred in the middle estuary (at Como), predominantly as winter- recruiting juveniles. Gravid, atokous adults spawned pelagically, with a 2 to 4 month larval development period preceding settlement. Intolerance of freshwater by the pelagic larvae possibly is the major reason excluding specimens from the upper reaches of the Estuary. Adult S. aequisetis brood eggs and embryonic larvae in tubiculous burrows; the life-cycle presumably progresses entirely in sediments of relatively stable interstitial salinity (compared to pelagic fluctuations), enabling recruitment by larvae and adults into the upper reaches of the Estuary. ... The ammonification rate was higher for A. ehlersi than S. aequisetis-inhabited cores, and lowest in uninhabited cores where polychaete excretion was absent. In the absence of C2H2, sediments of S. aequisetis inhabited cores indicated a lower net NH4+ influx than uninhabited cores, whereas A. ehlersi inhabited cores exhibited a slight net efflux of NH4+ from the sediment. The difference in magnitude of nitrogenous fluxes imparted by the two polychaete species is hypothesised to relate to the influence of their respective habits on the composition and activity of their associated sedimentary microbial community. Juvenile S. aequisetis are hypothesised to homogenise and aerate sediment continually, enhancing microbial nitrification and retarding anaerobic denitrification. Permanent A. ehlersi burrows would facilitate vertical and radial oxic/anoxic stratification of sediment which, combined with enhanced substrate supply through burrow ventilation, resulted in increased rates of microbial denitrification and nitrification. I have proposed a preliminary framework by which guilds of benthic fauna, each with similar designated habits, may be tested for predictable bioturbative influence on nitrogen cycling, i.e. whether particular habits may be considered 'functional groups'. In conclusion, the fine-scale effects of A. ehlersi and S. aequisetis on microbial nitrogen cycling are integrated with details of broader-scale population dynamics to define the role of polychaetes in estuarine nitrogen cycling, with a view to managing eutrophication.

Coastal transition zones form important interlinking regions where marine ecosystems, rivers and estuarine environments significantly influence each other. Coastal rocky shores are key habitats that sustain a variety of primary producers and invertebrates and due to the dynamic nature of coastal ecosystems, suspension-feeders on rocky shores can be influenced by an array of autochthonous and allochthonous food sources. Fatty acid and stable isotope trophic markers were employed to distinguish between regional and temporal changes in the potential food sources to rocky shore suspension-feeders in the Eastern Cape Province of South Africa. The primary aim was to assess the spatial and temporal influences of contrasting river flows on the available food sources to three indigenous coastal suspensionfeeders, namely the volcano barnacle Tetraclita serrata, brown mussel Perna perna and tubebuilding polychaete Gunnarea capensis. This was done by examining the intra- and interspecific changes in the fatty acid and stable isotope signatures of the barnacles, mussels and polychaetes in the adjacent marine environment of a freshwater-restricted (Kariega) and freshwater-dominated (Great Fish) estuary during austral summer and winter. Multivariate and Kruskal-Wallis analyses of variance on the fatty acid and isotopic signatures, respectively, identified significant regional changes in the barnacles and mussels, while only stable isotopes distinguished between the Kariega and Great Fish polychaetes (P < 0.05). In addition, significant temporal changes were observed in consumer fatty acids and isotope values in both regions (P < 0.05). Bacterial sources, detritus and phytoplankton assemblages, which are influenced by hydrology and vegetation, differed between regions and were mainly responsible for the regional and temporal separations. Principal component analyses on the consumer fatty acid signatures distinguished between animals situated upstream (i.e. north) and downstream (i.e. south) of the Kariega Estuary mouth in summer. The north/south separation was mainly due to greater contributions of diatoms to northernlocated animals and dinoflagellates and detritus to southern-located consumers. In addition, the south-flowing Agulhas Current on the eastern shores of southern Africa appeared to influence the north/south separation in the Kariega region, as water leaving the estuary was probably entrained into the south-easterly flowing currents, thereby depositing estuarinederived detritus to southern populations. In general, diatoms and detritus were essential food sources to the filter-feeders in summer, and flagellates, diatoms, zooplankton and detritus were important in winter. Coastal macroalgae was a key food source in the Kariega and Great Fish regions during both seasons. Consistently large levels of diatom markers (16:1n-7 and 20:5n-3) and dinoflagellate markers (22:6n-3) in consumer tissues in the Kariega and Great Fish regions identified that phytoplankton was their dominant food source. The barnacles, mussels and polychaetes had similar fatty acid markers and a fairly narrow δ¹³C range (-16.5 to -14.4 ‰), suggesting that they probably consumed similar food. Carbon isotope analyses, however, separated the suspension-feeders into slightly depleted (barnacles; -16.5 to -16.1 ‰), intermediate (mussels; -15.8 to -15.0 ‰) and enriched (polychaetes; -15.0 to -14.4 ‰) consumers, but did not provide conclusive evidence of their preferences for specific phytoplankton. Conversely, fatty acid analyses highlighted that barnacles and mussels had greater proportions of dinoflagellate markers (22:6n-3; 7.0-15.3 % TFA), while polychaetes had larger diatom levels (20:5n-3; 15.1-22.2 % TFA). In addition, all three species had consistently large contributions from bacterial fatty acids (15:0, i-16:0, 17:0 and i-18:0; 4.2-13.6 % TFA) in summer and winter, and large proportions of saturated fatty acids (33.3-53.1 % TFA) including those with 14 to 18 carbons, indicating that bacterial and detritus food sources played an important role in their diets. Barnacles had small levels of terrestrial markers (18:2n-6 and 18:3n-3; <2.5 % TFA) and demonstrated increased omnivorous feeding compared with the other suspension-feeders [increased levels of 20:1n-11 and 20:1n-9, higher 18:1n-9/18:1n-7 ratios at ~2.1, enriched δ¹⁵N values at ~10.6 ‰; zooplankton (potentially including microzooplankton, larvae and protists) contribution of up to 61 % of the diet]. Mussels contained significant proportions of the terrestrial markers (18:2n-6 and 18:3n-3; >2.5 % TFA) and exhibited intermediate omnivory (intermediate levels of 20:1n-11 and 20:1n-9, intermediate 18:1n-9/18:1n-7 ratios at ~1.3, less enriched δ¹⁵N values at ~7.9 ‰; zooplankton contribution of 10-15 % of the diet). The more depleted nitrogen signatures in the mussels relative to the barnacles and polychaetes possibly illustrated a stronger preference for autotrophic food. Polychaetes mainly consumed plant food sources (i.e. microalgae, macroalgae and detritus; high levels of i-18:0, 18:1n-9, 18:4n-3 and 20:5n-3) and displayed little omnivory (low levels of 20:1n-11 and 20:1n-9, low 18:1n-9/18:1n-7 ratios at ~0.4, intermediate δ¹⁵N values at ~9.1 ‰; zooplankton contribution of <10 % of the diet). The barnacles, mussels and polychaetes are all suspension-feeders, originally presumed to consume the same food sources. The variations observed among the species, therefore, may result from differences in the proportional contributions of the various food sources to their diets as well as distinctions in metabolism. The distinct changes in the fatty acid and stable isotope signatures in all three filter-feeders in the Kariega and Great Fish regions are likely influenced by the diversity in regional vegetation and hydrology in the different systems, combined with interspecific differences in resource partitioning among the species.