A robotic microscope was designed using a microcontroller to take time-lapse digital photographs of developing salamander embryos. The microcontroller operated three stepper motors to control three-axis movement accurately, and two six mega-pixel digital cameras to capture through-focus time-lapse digital pictures of six views of Ambystoma mexicanum embryos (axolotl, a salamander). The device is designed to take images every five minutes for 80 hours of early development, from fertilization to stage 20, when the neural tube closes to form the brain and spinal column. Techniques to enhance the embryo images were investigated including image fusion to get in-focus views from a stack of images. In the early embryo surface epithelial cells differentiate to form neural tissue and external skin tissue. Observing the whole embryo surface at cellular level will give a better idea of the stress and strain each cell undergoes and what physical forces are involved in cell differentiation.

A robotic microscope was designed using a microcontroller to take time-lapse digital photographs of developing salamander embryos. The microcontroller operated three stepper motors to control three-axis movement accurately, and two six mega-pixel digital cameras to capture through-focus time-lapse digital pictures of six views of Ambystoma mexicanum embryos (axolotl, a salamander). The device is designed to take images every five minutes for 80 hours of early development, from fertilization to stage 20, when the neural tube closes to form the brain and spinal column. Techniques to enhance the embryo images were investigated including image fusion to get in-focus views from a stack of images. In the early embryo surface epithelial cells differentiate to form neural tissue and external skin tissue. Observing the whole embryo surface at cellular level will give a better idea of the stress and strain each cell undergoes and what physical forces are involved in cell differentiation.

I investigated the value of under-road tunnels as a conservation strategy to protect a long-toed salamander population, in south-west Alberta, whose overwintering sites and breeding habitat (Linnet Lake) are separated by a road. I conducted a mark-recapture study from 2008-2009, capturing salamanders using roadside fences and pitfall traps. Four tunnels were monitored in 2009 using traps and cameras. A 2008 estimate indicated that the population declined by 60% since 1994, however, road mortality was dramatically reduced following installation of fences and tunnels. Camera and trap data documented 130 salamanders navigating tunnels in 2009. I found little evidence of juvenile recruitment from Linnet Lake, likely because of predation by lake chub. Experiments showed that lake chub consumed salamander larvae, and fish presence altered larval behaviour. Continued monitoring is needed to determine if reduced road mortality translates into population gains, and whether fish predation threatens the persistence of the long-toed salamander population. / Ecology

Thesis (M.A.)--University of Missouri-Columbia, 2008. / Vita. "Salamanders in the Appalachian region have been extensively studied, but the majority of research assessing the impacts of logging has focused on terrestrial species that are not dependent on stream habitats for egg deposition or larval development. I have collected data on both larval and adult salamanders in headwater streams in western North Carolina to determine the impacts of even-aged timber harvest on salamander populations and to assess the efficacy of riparian buffers in ameliorating these effects. My data show that larval two-lined salamanders are negatively impacted by increased stream sedimentation following riparian logging and that increasing the riparian buffer around the stream reduces sedimentation effects; larval black-bellied salamanders were not significantly affected by riparian alteration. Adult and juvenile salamanders dependent on terrestrial habitat were also affected; seal salamander densities were significantly higher in streams with little to no riparian buffer while Ocoee salamanders were significantly less abundant. It is unlikely that salamanders will persist or thrive for more than a season or two in logged forests due to a significant deterioration in body condition of Ocoee salamanders in logged riparian areas. My results indicate that current riparian forest conservation measures are inadequate to preserve either larval or adult salamander populations." -- leaves xi-xii. Includes bibliographical references.

Theses (M.S.)--Marshall University, 2006. / Title from document title page. Includes abstract. Document formatted into pages: contains vi, 65 p. including illustrations and maps. Bibliography: p. 61-65.

The Barton Springs salamander (Eurycea sosorum) is a federally endangered species that is endemic to Barton Springs in Austin, Texas. Development within the Barton Springs watershed threatens the continued existence of E. sosorum. A factor that may be contributing to its decline is contamination from polycyclic aromatic hydrocarbons (PAHs). Nearby asphalt parking lots paved with coal-tar and asphalt sealants can be sources of PAHs. Unaltered parent compounds of PAHs can have toxic effects, but oxidation and ultraviolet radiation can create degradation products 100 times more toxic than the parent compounds. The objective of this project was to determine if PAHs are potentially harmful to E. sosorum using two surrogate species. Adult eastern newts (Notophthalmus viridescens) and larval spotted salamanders (Ambystoma maculatum) were exposed to sediments with nominal concentrations of total PAHs that ranged from 0 to 1500 mg/kg under UV (290 - 400 nm) and visible (400 - 700 nm) light to determine concentration/response relationships. No statistically significant mortality occurred under any treatment. Exposure to both coal-tar sealant and UV light resulted in sublethal effects such as decreased righting ability and swimming speed. Difficulty in performing such movements would make it difficult to catch prey and increase susceptibility to predation. Exposure to UV light also resulted in elevated numbers of micronucleated erythrocytes and white blood cells. This study shows that simultaneous exposure to PAHs and UV light result in sublethal effects that could make the population of E. sosorum vulnerable to further decline.

The Coeur d’Alene salamander (Plethodon idahoensis) is a species of special concern throughout its global range, which includes southeastern BC (COSEWIC, Nov 2007), Idaho, and Montana, due to disjunct populations and sensitivity to human disturbance. Within the Interior Cedar-Hemlock forest on Mount Revelstoke, BC, Coeur d’Alene salamanders occur at their highest abundance between 600 m and 800 m. Beyond the Mount Revelstoke National Park boundaries, the low-order stream habitat of this species is subject to disturbance from forestry, mining, road building, road maintenance, and watercourse diversions such as run-of-the-river hydro projects. We conducted nocturnal salamander surveys and assessed habitat characteristics on 12 Sites (750 m² – 1000 m² stream transects) along three streams from June through September 2006. Coeur d’Alene salamanders were detected from 600 m - 1000 m on seven of the 12 study sites. Relative abundance of Coeur d’Alene salamanders ranged from 0.005 ± 0.001 per m² to 0.025 ± 0.005 per m² on six sites below 950 m. Coeur d’Alene salamanders occurred at an average of 0.001 ± 0.001 per m² at 972 m, the only site above 950 m where we detected salamanders. Our capture-mark-recapture efforts of three surveys per month in June and August yielded a very low recapture rate (3.95 %). Coeur d’Alene salamanders are challenging to enumerate due to their vertical distribution within the soil and underlying geological material. Neonate, juvenile, and adult Coeur d’Alene salamanders were observed from June to September and the highest proportion of neonates occurred in June, soon after the salamanders emerged from winter hibernation. Results of a logistic regression analysis of 1-m² plots reflected the importance of fine scale habitat characteristics (quadrat gradient, boulder, cobble, moss, grass, and shrub) in addition to site-level habitat features (water volume and elevation) that in combination describe the association of Coeur d’Alene salamanders with cool and moist conditions. Coeur d’Alene salamanders appear to select streambed habitat during warm, dry periods, which may be a behavioural response to minimize dehydration during periods of activity at the surface of the forest floor. / Forestry, Faculty of / Graduate

Many organisms are known to reach high levels of endemism and biodiversity in the temperate forests of Southern Appalachia, especially in the dense forests and rugged terrain of the Blue Ridge physiographic province. Many plants and fungi reach their highest levels of biodiversity in these mountains, as does one group of vertebrates: the lungless salamanders, Plethodontidae. This family of salamanders hosts the most species of any other group of salamanders on earth and has adapted to a wide range of habitats. Only two of the approximately twenty-seven known genera are not found in North or South America, and while we know much about the modern-day biology of this family, few fossils older than ~15,000 years have been recovered, complicating our understanding of the historical distribution of this group and the timing of key evolutionary events within the family. Recently discovered salamander fossils from the Gray Fossil Site provide the foundation of this project. We describe these exceptionally large plethodontid remains to a new genus that belongs to the group containing dusky salamanders, or desmognathans. The morphology of the fossil material resembles Phaeognathus hubrichti, an extant burrowing species from southern Alabama with a suite of primitive characteristics. Comparison of the fossil material to modern desmognathans using geometric statistical methods has revealed that the extinct form was likely similar in lifestyle to P. hubrichti, but considerably larger. It was unparalleled in the southern Appalachians in terms of size and ecology, and reveals a more complex evolutionary history for desmognathan salamanders.

No description available.

Understanding the movement phenology of the four-toed salamander (Hemidactylium scutatum) is essential to guide management practices. I examined the relationship between environmental variables and the directionality, timing, and magnitude of four-toed salamander movements at two locations in eastern Massachusetts. Four-toed salamanders move from upland habitats to wetland areas in early spring and move away from wetlands in late spring. Adult movements increased with more precipitation and less moon light. Juvenile movements were similarly affected, and in addition they were more likely to move when temperatures were warm and days long. My results can be used to implement management strategies aimed at reducing human-related impacts on migrating four-toed salamanders (e.g., road closures to reduce road mortality). In addition, I developed and evaluated the accuracy of classification and regression tree (CART) models at multiple spatial scales to predict suitable habitat and potential species occurrences of the four-toed salamander (Hemidactylium scutatum) in Massachusetts. I analyzed four-toed salamander Element Occurrence (EO) observations reported during 1990-2009 in response to fifteen environmental predictor variables at six different local and landscape-scales. The landscape-scale model measured at 2000 m was most successful at predicting four-toed salamander habitat. It correctly classified 92.4% of the training data and 87.7% of the verification data. When the 2000 m model was applied statewide, 30,195 wetlands were determined to be potentially suitable habitat for the four-toed salamander. The results of this study confirm the potential and value of classification and regression tree models for identifying potential habitat for rare or cryptic species.