<p>Salicylic acid (SA) is a central plant defense signal. It is not only required for closing the stomata upon infection to prevent pathogens from entering into the plant apoplast, but also mediates defense responses activated by pathogen-originated microbe-associated molecular patterns (MAMPs) and effectors in the infected tissues. In addition, SA is a necessary and sufficient signal for systemic acquired resistance (SAR). In <italic>Arabidopsis</italic> <italic>thaliana</italic>, SA level increases in response to pathogen attack, which is essential for activating defense responses. This SA accumulation involves transcriptional activation of several genes including <italic>ICS1</italic> (<italic>ISOCHORISMATE</italic> <italic>SYNTHASE</italic> <italic>1</italic>), <italic>EDS5</italic> (<italic>ENHANCED</italic> <italic>DISEASE</italic> <italic>SUSCEPTIBILITY</italic> <italic>5</italic>), <italic>EDS1</italic> (<italic>ENHANCED</italic> <italic>DISEASE</italic> <italic>SUSCEPTIBILITY</italic> <italic>1</italic>), <italic>PAD4</italic> (<italic>PHYTOALEXIN-DEFICIENT</italic> <italic>4</italic>) and <italic>PBS3</italic> (<italic>avrPphB</italic> <italic>SUSCEPTIBLE</italic> <italic>3</italic>). However, it is not well understood how pathogenic signals induce these SA accumulation genes. Interestingly, our time-course transcriptome analysis showed that these five genes share a similar pathogen-induced expression pattern, suggesting the existence of common transcription factors (TFs). Through yeast-one-hybrid screening, a TF NTL9 was identified for its interactions with the promoters of the SA accumulation genes. Preferentially expressed in guard cells, NTL9 activates the expression of SA accumulation genes in guard cells. The <italic>ntl9</italic> mutant is defective in pathogen-induced stomatal closure mediated by a well-characterized MAMP, flg22. Consistent with the stomatal closure defect, the <italic>ntl9</italic> mutant exhibits elevated susceptibility to surface-inoculated pathogens. The stomatal closure defect of the <italic>ntl9</italic> mutant can be rescued by exogenous application of SA, demonstrating that NTL9 acts upstream of SA in stomatal closure response. These results suggest that NTL9-mediated activation of SA accumulation genes is essential for MAMP-triggered stomatal closure.</p><p>While plants induce SA to activate defense responses, pathogens can also produce virulence factors to counteract the effects of SA. Coronatine is one such virulence factor produced by <italic>Pseudomonas</italic> <italic>syringae</italic>. Coronatine is known to promote opening of stomata for bacterial entry, bacterial growth in the apoplast, systemic susceptibility and development of disease symptoms such as chlorosis. In the process of examining the mechanisms underlying coronatine-mediated virulence, three homologous TFs, ANAC019, ANAC055 and ANAC072, were found to be activated by coronatine directly through the TF, MYC2. Genetic characterization of these three TF mutants revealed that these TFs mediate multiple virulence effects of coronatine by inhibiting SA accumulation. To exert this inhibitory effect, these TFs repress <italic>ICS1</italic> and activate <italic>BSMT1</italic>, genes involved in SA biosynthesis and inactivation modification, respectively. Thus, a signaling cascade downstream of coronatine was illustrated to dampen SA-mediated defense responses through differential transcriptional regulation of genes related to SA level.</p><p>Taken together, my dissertation studies revealed novel transcriptional regulation of SA production and demonstrated that this transcriptional regulation is a vital point not only for plant defense activation but also for pathogen manipulation to counteract defense responses. Further studies on the interplay of this transcriptional regulation by different TFs would broaden our understanding about the dynamics of plant-pathogen interaction.</p> / Dissertation

The arrival of the North American Monsoon System (NAMS) terminates a presummer hyperarid period in the southwestern United States (U.S.), providing summer moisture that is favorable for forest growth. Montane forests in this region rely on winter snowpack to drive much of their growth; the extent to which they use NAMS moisture is uncertain. We addressed this by studying stable carbon and oxygen isotopes in earlywood and latewood from 11 sites along a latitudinal gradient extending from Arizona and New Mexico to Utah. This study provides the first regional perspective on the relative roles of winter versus summer precipitation as an ecophysiological resource. Here we present evidence that Ponderosa pine uses NAMS moisture differentially across this gradient. C-13/C-12 ratios suggest that photosynthetic water use efficiency during latewood formation is more sensitive to summer precipitation at the northern than at the southern sites. This is likely due to the fact that NAMS moisture provides sufficiently favorable conditions for tree photosynthesis and growth during most years in the southern sites, whereas the northern sites experience larger summer moisture variability, which in some years is limiting growth. Cellulose O-18 and C-13 values revealed that photoassimilates in the southern sites were produced under higher vapor pressure deficit conditions during spring compared to summer, demonstrating a previously underappreciated effect of seasonal differences in atmospheric humidity on tree ring isotope ratios. Our findings suggest that future changes in NAMS will potentially alter productivity and photosynthetic water use dynamics differentially along latitudinal gradients in southwestern U.S. montane forests.

Plants of the genus Bergenia are part of remedies used in Ayurveda medicine. They also play an important part in traditional healing practice in China, India, Mongolia and Russia. Theoretical part of this thesis sums the newest findings and research results concerning three Bergenia species: Bergenia ciliata (Haw.) Sternb., Bergenia crassifolia (L.) Fritsch a Bergenia ornata Stein. The thesis mainly focuses on their current and potential use in medicine and pharmacy. Bergenia extract is traditionally used for dissolving kidney stones, treating respiratory tract illnesses and to stop bleeding. The most important active substances of these plants, their characteristics and main effects are also noted. Bergenia is an important source of arbutin and bergenin. Bergenin has antitussive, antiflogistic and gastroprotective effects. Arbutin is used to treat urinary tract diseases and in cosmetology to lighten the skin. The experimental part of this thesis includes methods of preparation of permanent microscope slides from leaves of chosen Bergenia species. Photographs have been taken from both permanent and native slides. Anatomy of the leaf and leaf epidermis is described including stomatal index. Presence of calcium oxalate crystals in form of druses is also documented. Basic anatomical features were...

L'ozone troposphérique est un polluant atmosphérique majeur qui agit comme une phytotoxine. Il pénètre dans les feuilles par les stomates avant d'être dissout dans l'apoplaste en générant des radicaux libres oxygénés (ROS) provoquant ainsi un stress oxydatif. Deux barrières existent pour restreindre les effets de l'ozone : (i) les stomates qui peuvent limiter les flux entrants par contrôle de la conductance stomatique et (ii) le système de détoxication des ROS issus de la dégradation de l'ozone. Nous avons étudié les effets de l'ozone (120 ppb) sur ces deux moyens de défense chez trois génotypes de peuplier euraméricain (Populus deltoides x Populus nigra) placés en conditions contrôlées dans des chambres phytotroniques. Un effet direct de l'ozone sur la photosynthèse et sur les mouvements stomatiques en réponse à des variations de facteurs environnementaux (ralentissement des phénomènes d'ouverture et de fermeture) a été mis en évidence. Les modèles de calcul de la conductance stomatique, sur lesquels se basent les indicateurs de seuil de risque à l'ozone pour la végétation, doivent donc les prendre en compte. De plus, ces travaux ont mis en évidence le rôle prépondérant des concentrations constitutives en antioxidants dans la tolérance à l'ozone ainsi que la complexité de ces mécanismes de détoxication. La notion de flux effectif d'ozone doit prendre en considération ces deux aspects afin de caractériser au mieux les différences de sensibilité à l'ozone intra et inter spécifique / Tropospheric ozone is a major air pollutant that acts as a phytotoxin. It enters the leaf through the stomata before being dissolved in the apoplast by generating reactive oxygen species (ROS) causing oxidative stress. Two defenses exist to restrict the effects of ozone: (i) the stomata which can limit ozone uptake by regulating stomatal conductance and (ii) the detoxification processes of ROS generated by ozone.We studied the effects of ozone (120 ppb) on these two mechanisms of defense in three euramerican poplar genotypes (Populus deltoides x Populus nigra) under controlled conditions in phytotronic chambers. A direct effect of ozone on photosynthesis and stomatal movements in response to changes in environmental factors (by slowing the stomatal opening and closure) has been highlighted. Models of stomatal conductance, on which indicators of critical level of ozone for vegetation are based, must take them into account. In addition, these studies have highlighted the role of constitutive concentrations of antioxidants in tolerance to ozone as well as the complexity of these detoxification mechanisms. The notion of effective ozone flux must consider these two aspects to better characterize the intra-and inter-specific differences in sensitivity to ozone

Entender os mecanismos de defesa das plantas de crisântemo em resposta à deficiência hídrica é importante no processo produtivo desta cultura. O objetivo neste trabalho foi determinar a resposta da transpiração e do crescimento foliar, de cultivares de crisântemo (Dendranthema grandiflora Tzvelev.), ao conteúdo de água disponível em substrato, representado pela fração de água transpirável em substrato (FATS). Foram realizados dois experimentos, no setor de floricultura do Colégio Politécnico da UFSM, utilizando-se o delineamento inteiramente casualizado, sendo um no fim da primavera de 2011, com aplicação dos tratamentos a partir de 09/12/2011 - e um no inverno de 2012, com aplicação dos tratamentos a partir de 07/07/2012. As plantas foram cultivadas em vasos de 2,8 litros, preenchidos com substrato e dispostos no interior de uma casa de vegetação com controle de temperatura. As cultivares de crisântemo utilizadas foram a Cherry White (de vaso), Repin Bronze (de corte), Apple Valley (de vaso) e Calábria (de corte). A FATS, a transpiração e o crescimento foliar foram determinados diariamente durante o período de imposição da deficiência hídrica em cada experimento. A FATS crítica no crisântemo que começa a afetar a transpiração, indicativo do início do fechamento estomático, é de 0,63 para a cultivar Cherry White; 0,60 para a cultivar Repin Bronze; 0,53 para a cultivar Apple Valley; e 0,51, para a cultivar Calábria. A redução do crescimento foliar inicia com um valor de FATS crítica de 0,67 para a cultivar Cherry White; 0,69 para a cultivar Repin Bronze; 0,59 para a cultivar Apple Valley e 0,54, para a cultivar Calábria. As cultivares Cherry White e Repin Bronze apresentam maior tolerância ao déficit hídrico do que as cultivares Apple Valley e Calábria. O crescimento foliar começa ser reduzido com um valor de FATS crítica maior do que o valor de FATS crítica em que a transpiração começa a ser reduzida. A deficiência hídrica afeta negativamente as variáveis de crescimento e de desenvolvimento de cultivares de crisântemo. / Understand the defense mechanisms of plants of chrysanthemum in response to water stress is important in the production process of this crop. The objective of this study was to determine the response of the plant to transpiration and leaf growth of chrysanthemum cultivars (Dendranthema grandiflora Tzvelev.), related to the available water content in the substrate, represented by the fraction of transpirable substrate water (FTSW). Two Greenhouse experiments were conducted in the flower sector of the Polytechnic College UFSM, using a completely randomized design. One started end of spring of 2011, with application of treatments on 09/12/2011 and the second in winter 2012, with application of treatments on 07/07/2012. Plants were grown in 2.8 liter pots filled with substrate and arranged inside a greenhouse with temperature control. The chrysanthemum cultivars were Cherry White (potted), Repin Bronze (for cut), Apple Valley (potted) and Calabria (for cut). The FTSW, transpiration and leaf growth were determined daily during the period of imposition of water deficit in each experiment. The threshold FTSW for Chrysanthemum that begins to affect transpiration, is an indicative of early stomatal closure and was 0.63 for the cultivar Cherry White, 0.60 for Repin Bronze, 0.53 for Apple Valley and 0.51, for Calabria. Leaf growth began to be reduced at a threshold FTSW of 0.67 for Cherry White, 0.69 for Repin Bronze, 0.59 for Apple Valley and 0.54, for Calabria. Cultivars Cherry White and Bronze Repin proved to be more tolerant to water deficit than the cultivars Apple Valley and Calábria. The reduced leaf growth starts with a threshold FTSW value larger than the threshold FTSW value related to reduced transpirations. The water deficit negatively affected the variables of growth and development of the chrysanthemum cultivars.

O estudo caracterizou as variáveis fisiológicas da fotossíntese, em 7 clones de Eucalyptus de alta produtividade, determinando-se as capacidades fotossintéticas máximas (Amax), e o comportamento da fotossíntese (A), condutância (gs) e transpiração (E) em relação ao Déficit de Pressão de Vapor (DPV). Para isso, um ensaio foi instalado em 2004, na ESALQ/USP, contendo os clones do Projeto BEPP (Brasil Eucalyptus Produtividade Potencial), sendo cada parcela composta de 49 plantas (7x7) no espaçamento de 3,0m x 2,7m. Mediram-se as alturas ou DAPs e selecionaram-se 3 árvores médias para as mensurações fisiológicas, aos 16 e 36 meses. A amostragem para Amax foi composta de duas posições superiores da copa (2 e 3), dois galhos por posição e duas folhas por galho. As medições foram feitas das 8 às 10 horas (baixo DPV). Para o comportamento de A e gs frente ao DPV, as medições continuaram, de hora em hora, das 11 às 15 horas, nas folhas do primeiro galho da posição 2. Ao final as folhas foram coletadas para determinação da área foliar específica (AFE) e do nitrogênio (N). Aos 16 meses, foram feitas curvas A/Ci, para posterior cálculo de Vcmax (taxa máxima de carboxilação), Jmax (taxa máxima de transporte de elétrons) e VTPU (utilização da triose fosfato), pelo programa Photosyn Assistant. As curvas foram feitas em 2 árvores por clone, nas posições superiores e inferiores da copa. Todas mensurações foram realizadas com o aparelho LiCor-6400. Os resultados mostraram que Amax foi similar para as posições 2 e 3. Entre os clones, houve variação, porém não consistente entre idades, e todos mostraram altos valores de Amax na idade de 16 meses (entre 26 e 31, com média de 29 µmol m-2s-1), reduzindo-se aos 36 meses (entre 19 e 26, com média de 22 µmol m-2s-1). A AFE e o N também foram similares entre as posições 2 e 3 e maiores na idade mais jovem (11 versus 8 m²kg-1, 29 versus 21 gN kg-1), podendo estar associados à queda de Amax. A, gs e E também apresentaram menores valores aos 36 meses, para todos os clones (23 versus 18 µmol m-2s-1; 0,41 versus 0,26 mol m-2s-1; 9,2 versus 6,1 mmol m-2s-1). Os clones mostraram sensibilidade ao DPV, reduzindo os valores de gs e A ao longo do dia, sendo a sensibilidade menor aos 36 meses. As sensibilidades foram distintas, evidenciando potencial de seleção de materiais mais aptos a tolerarem estresse hídrico. Em geral, maiores valores de fotossíntese estão relacionados a maiores valores de transpiração, evidenciando a necessidade de se conhecer a disponibilidade hídrica local quando do uso de clones de alta produtividade. Vcmax, Jmax e VTPU foram maiores para as posições superiores da copa, e não diferiram entre os clones. Devido à semelhança fisiológica entre as posições 2 e 3, pode-se sugerir que não haja distinção entre elas em futuras medições de fotossíntese, essenciais para a parametrização de modelos. Não houve relação direta entre crescimento do tronco e fotossíntese, evidenciando a necessidade de integração com estudos relacionados à alocação do carbono dentro da planta. / This study aimed to characterize the physiological variables related to photosynthesis, in seven commercial Eucalyptus clones with high productivity, by evaluating maximum photosynthetic capacity (Amax), and the response of photosynthesis (A), stomatal conductance (gs) and transpiration (E) to Vapor Pressure Deficit (VPD). A trial was installed in 2004, at ESALQ/USP, with the clones that were part of BEPP Project (Brazil Eucalyptus Potential Productivity), and each plot had 49 plants (7x7) in a 3 m x 2.7m spacing. We measured tree height or DBHs and three average trees were selected for measurements, at 16 and 36 months. The sample to estimate Amax was: two crown positions (2 and 3), two branches per tree and two leaves per branch. The measurements which were taken from 8 to 10 am (low VPD). To get the response of A and gs to VPD measurements continued hourly, from 11 am to 3 pm, on the leaves from the first branch and position 2. At the end of the measurements leaves were collected for specific leaf area (SLA) and nitrogen (N) determination. Additionally, at 16 months, A/Ci curves were established, and parameters Vcmax, Jmax and VTPU were estimated through the program Photosyn Assistant. The curves were done for 2 trees per clone, at superior crown positions (2 and 3) and inferior ones (4 and 5). The physiological measurements and A/Ci curves were made using LiCor-6400. The results showed that Amax was similar for positions 2 and 3. There was variation among clones, but not consistent between ages, and all the clones had high Amax at 16 months (between 26 and 31 µmol m-2s-1, with an average of 29 µmol m-2s-1), decreasing at 36 months (between 19 and 26 µmol m-2s-1, with an average of 22 µmol m-2s-1). SLA and N were also similar between positions 2 and 3 and higher at younger age (11,1 versus 8,3 m²kg-1, 29,6 versus 21,1 gN kg-1;), what may be associate with Amax decrease. A, gs and E also showed lower values at age 36, for all the clones (23 versus 18 µmol m-2s-1; 0,41 versus 0,26 mol m-2s-1; 9,2 versus 6,1 mmol m-2s-1). All clones showed sensitivity to VPD, reducing gs and A with increasing VPD. However, the clones showed different sensitivities and all of them were less sensitive to VPD at age 36, highlighting a selection potential of genetic materials for water stress. In general, higher photosynthesis values were associated with higher transpiration, showing the necessity to know the water conditions of sites when planting genetic materials with high productivity. Vcmax, Jmax and VTPU were greater for superior positions compared to inferior ones, and were not different among clones. Due to a similarity in SLA, N and physiological and biochemical traits between positions 2 and 3, no distinction on future photosynthesis measurements between these positions is needed. Finally, there was not a direct relation between stem growth and photosynthesis, at both ages, showing that photosynthesis at crown level by itself can not capture all the ecophysiological processes related to wood productivity, being necessary the integration with studies related to carbon allocation inside the plant.

Entender os mecanismos de defesa das plantas de crisântemo em resposta à deficiência hídrica é importante no processo produtivo desta cultura. O objetivo neste trabalho foi determinar a resposta da transpiração e do crescimento foliar, de cultivares de crisântemo (Dendranthema grandiflora Tzvelev.), ao conteúdo de água disponível em substrato, representado pela fração de água transpirável em substrato (FATS). Foram realizados dois experimentos, no setor de floricultura do Colégio Politécnico da UFSM, utilizando-se o delineamento inteiramente casualizado, sendo um no fim da primavera de 2011, com aplicação dos tratamentos a partir de 09/12/2011 - e um no inverno de 2012, com aplicação dos tratamentos a partir de 07/07/2012. As plantas foram cultivadas em vasos de 2,8 litros, preenchidos com substrato e dispostos no interior de uma casa de vegetação com controle de temperatura. As cultivares de crisântemo utilizadas foram a Cherry White (de vaso), Repin Bronze (de corte), Apple Valley (de vaso) e Calábria (de corte). A FATS, a transpiração e o crescimento foliar foram determinados diariamente durante o período de imposição da deficiência hídrica em cada experimento. A FATS crítica no crisântemo que começa a afetar a transpiração, indicativo do início do fechamento estomático, é de 0,63 para a cultivar Cherry White; 0,60 para a cultivar Repin Bronze; 0,53 para a cultivar Apple Valley; e 0,51, para a cultivar Calábria. A redução do crescimento foliar inicia com um valor de FATS crítica de 0,67 para a cultivar Cherry White; 0,69 para a cultivar Repin Bronze; 0,59 para a cultivar Apple Valley e 0,54, para a cultivar Calábria. As cultivares Cherry White e Repin Bronze apresentam maior tolerância ao déficit hídrico do que as cultivares Apple Valley e Calábria. O crescimento foliar começa ser reduzido com um valor de FATS crítica maior do que o valor de FATS crítica em que a transpiração começa a ser reduzida. A deficiência hídrica afeta negativamente as variáveis de crescimento e de desenvolvimento de cultivares de crisântemo. / Understand the defense mechanisms of plants of chrysanthemum in response to water stress is important in the production process of this crop. The objective of this study was to determine the response of the plant to transpiration and leaf growth of chrysanthemum cultivars (Dendranthema grandiflora Tzvelev.), related to the available water content in the substrate, represented by the fraction of transpirable substrate water (FTSW). Two Greenhouse experiments were conducted in the flower sector of the Polytechnic College UFSM, using a completely randomized design. One started end of spring of 2011, with application of treatments on 09/12/2011 and the second in winter 2012, with application of treatments on 07/07/2012. Plants were grown in 2.8 liter pots filled with substrate and arranged inside a greenhouse with temperature control. The chrysanthemum cultivars were Cherry White (potted), Repin Bronze (for cut), Apple Valley (potted) and Calabria (for cut). The FTSW, transpiration and leaf growth were determined daily during the period of imposition of water deficit in each experiment. The threshold FTSW for Chrysanthemum that begins to affect transpiration, is an indicative of early stomatal closure and was 0.63 for the cultivar Cherry White, 0.60 for Repin Bronze, 0.53 for Apple Valley and 0.51, for Calabria. Leaf growth began to be reduced at a threshold FTSW of 0.67 for Cherry White, 0.69 for Repin Bronze, 0.59 for Apple Valley and 0.54, for Calabria. Cultivars Cherry White and Bronze Repin proved to be more tolerant to water deficit than the cultivars Apple Valley and Calábria. The reduced leaf growth starts with a threshold FTSW value larger than the threshold FTSW value related to reduced transpirations. The water deficit negatively affected the variables of growth and development of the chrysanthemum cultivars.

O estudo caracterizou as variáveis fisiológicas da fotossíntese, em 7 clones de Eucalyptus de alta produtividade, determinando-se as capacidades fotossintéticas máximas (Amax), e o comportamento da fotossíntese (A), condutância (gs) e transpiração (E) em relação ao Déficit de Pressão de Vapor (DPV). Para isso, um ensaio foi instalado em 2004, na ESALQ/USP, contendo os clones do Projeto BEPP (Brasil Eucalyptus Produtividade Potencial), sendo cada parcela composta de 49 plantas (7x7) no espaçamento de 3,0m x 2,7m. Mediram-se as alturas ou DAPs e selecionaram-se 3 árvores médias para as mensurações fisiológicas, aos 16 e 36 meses. A amostragem para Amax foi composta de duas posições superiores da copa (2 e 3), dois galhos por posição e duas folhas por galho. As medições foram feitas das 8 às 10 horas (baixo DPV). Para o comportamento de A e gs frente ao DPV, as medições continuaram, de hora em hora, das 11 às 15 horas, nas folhas do primeiro galho da posição 2. Ao final as folhas foram coletadas para determinação da área foliar específica (AFE) e do nitrogênio (N). Aos 16 meses, foram feitas curvas A/Ci, para posterior cálculo de Vcmax (taxa máxima de carboxilação), Jmax (taxa máxima de transporte de elétrons) e VTPU (utilização da triose fosfato), pelo programa Photosyn Assistant. As curvas foram feitas em 2 árvores por clone, nas posições superiores e inferiores da copa. Todas mensurações foram realizadas com o aparelho LiCor-6400. Os resultados mostraram que Amax foi similar para as posições 2 e 3. Entre os clones, houve variação, porém não consistente entre idades, e todos mostraram altos valores de Amax na idade de 16 meses (entre 26 e 31, com média de 29 µmol m-2s-1), reduzindo-se aos 36 meses (entre 19 e 26, com média de 22 µmol m-2s-1). A AFE e o N também foram similares entre as posições 2 e 3 e maiores na idade mais jovem (11 versus 8 m²kg-1, 29 versus 21 gN kg-1), podendo estar associados à queda de Amax. A, gs e E também apresentaram menores valores aos 36 meses, para todos os clones (23 versus 18 µmol m-2s-1; 0,41 versus 0,26 mol m-2s-1; 9,2 versus 6,1 mmol m-2s-1). Os clones mostraram sensibilidade ao DPV, reduzindo os valores de gs e A ao longo do dia, sendo a sensibilidade menor aos 36 meses. As sensibilidades foram distintas, evidenciando potencial de seleção de materiais mais aptos a tolerarem estresse hídrico. Em geral, maiores valores de fotossíntese estão relacionados a maiores valores de transpiração, evidenciando a necessidade de se conhecer a disponibilidade hídrica local quando do uso de clones de alta produtividade. Vcmax, Jmax e VTPU foram maiores para as posições superiores da copa, e não diferiram entre os clones. Devido à semelhança fisiológica entre as posições 2 e 3, pode-se sugerir que não haja distinção entre elas em futuras medições de fotossíntese, essenciais para a parametrização de modelos. Não houve relação direta entre crescimento do tronco e fotossíntese, evidenciando a necessidade de integração com estudos relacionados à alocação do carbono dentro da planta. / This study aimed to characterize the physiological variables related to photosynthesis, in seven commercial Eucalyptus clones with high productivity, by evaluating maximum photosynthetic capacity (Amax), and the response of photosynthesis (A), stomatal conductance (gs) and transpiration (E) to Vapor Pressure Deficit (VPD). A trial was installed in 2004, at ESALQ/USP, with the clones that were part of BEPP Project (Brazil Eucalyptus Potential Productivity), and each plot had 49 plants (7x7) in a 3 m x 2.7m spacing. We measured tree height or DBHs and three average trees were selected for measurements, at 16 and 36 months. The sample to estimate Amax was: two crown positions (2 and 3), two branches per tree and two leaves per branch. The measurements which were taken from 8 to 10 am (low VPD). To get the response of A and gs to VPD measurements continued hourly, from 11 am to 3 pm, on the leaves from the first branch and position 2. At the end of the measurements leaves were collected for specific leaf area (SLA) and nitrogen (N) determination. Additionally, at 16 months, A/Ci curves were established, and parameters Vcmax, Jmax and VTPU were estimated through the program Photosyn Assistant. The curves were done for 2 trees per clone, at superior crown positions (2 and 3) and inferior ones (4 and 5). The physiological measurements and A/Ci curves were made using LiCor-6400. The results showed that Amax was similar for positions 2 and 3. There was variation among clones, but not consistent between ages, and all the clones had high Amax at 16 months (between 26 and 31 µmol m-2s-1, with an average of 29 µmol m-2s-1), decreasing at 36 months (between 19 and 26 µmol m-2s-1, with an average of 22 µmol m-2s-1). SLA and N were also similar between positions 2 and 3 and higher at younger age (11,1 versus 8,3 m²kg-1, 29,6 versus 21,1 gN kg-1;), what may be associate with Amax decrease. A, gs and E also showed lower values at age 36, for all the clones (23 versus 18 µmol m-2s-1; 0,41 versus 0,26 mol m-2s-1; 9,2 versus 6,1 mmol m-2s-1). All clones showed sensitivity to VPD, reducing gs and A with increasing VPD. However, the clones showed different sensitivities and all of them were less sensitive to VPD at age 36, highlighting a selection potential of genetic materials for water stress. In general, higher photosynthesis values were associated with higher transpiration, showing the necessity to know the water conditions of sites when planting genetic materials with high productivity. Vcmax, Jmax and VTPU were greater for superior positions compared to inferior ones, and were not different among clones. Due to a similarity in SLA, N and physiological and biochemical traits between positions 2 and 3, no distinction on future photosynthesis measurements between these positions is needed. Finally, there was not a direct relation between stem growth and photosynthesis, at both ages, showing that photosynthesis at crown level by itself can not capture all the ecophysiological processes related to wood productivity, being necessary the integration with studies related to carbon allocation inside the plant.

Abstract Drought is the most common abiotic stress limiting chickpea production in the world. Ninety percent of the worlds chickpea is produced in areas relying upon conserved, receding soil moisture, therefore, crop productivity is largely dependent on efficient utilization of available soil moisture. Because of the variability in drought pattern from year to year, trait based selection could have an advantage over selection on the basis of grain yield alone. Trait based breeding, however, requires trait dissection into components. Successful marker identification would facilitate integration of MAS procedures in breeding programs enabling the pyramiding of favourable alleles.<p> The genetic map produced in this study was based on a population of recombinant inbred lines of a cross of ILC 588 x ILC 3279 containing 52 SSR markers spanned 335 cM of the chickpea genome at an average density of 6.4 cM. A total of 13 genomic regions were shown to be associated with drought tolerance traits. Some of these genomic regions showed pleiotropic effect on multiple traits. This was also supported by the analysis of phenotypic data where these traits were found to be correlated. For example, early flowering and maturity had a strong association with high grain yield. High grain yield was also associated with better portioning ability between biomass and grain yield, i.e. harvest index. Drought tolerance score (DTS) was associated with various important traits including biomass, early flowering, early maturity.<p> This study also concluded that chickpea genotypes differed in terms of root length, root length density, root weight density and root length to weight ratio at every 20 cm soil layer up to 100 cm depth in response to water deficits. Consideration of an efficient root system vs. a larger root system is also important, since in this research, large root systems were offset by low harvest index, presumably due to the lack of assimilate available for grain growth. A restricted root system is important in environments like Western Canada, where crop growth termination is usually required prior to fall frost. This study also reported significant associations of stomatal conductance (gs) with each of HI, grain yield under drought, drought susceptibility index and drought tolerance score (DTS). Stomatal conductance can also be used to assess plant stress due to drought. Values of gs less than 250 mmol m-2s-1 during flowering indicated drought stress under greenhouse conditions. A higher degree of plant stress due to drought was shown by increased stomatal closure at midday (gs <150 mmol m-2s-1). The study of 157 RILs under natural drought stress during 2005-07 revealed that the 17 RILs which had high grain yield under drought (Group A), also tended to have higher gs than the 42 RILs that had lower grain yield (Group B). Group A had mean gs values of 390 mmol m-2s-1 during the week before flowering, while Group B had mean gs value of 330 mmol m-2s-1. Stomatal conductance increased at flowering and then sharply decreased later in the reproductive period, particularly in Group B. These findings were also supported by canopy temperature differential measurements as Group A was also able to maintain lower canopy temperature than Group B, indicating the ability of these plants to maintain adequate transpiration and a cooler canopy under drought stress. This research indicated that gs and canopy temperature can be used to assess chickpea drought stress and to screen drought tolerant genotypes. This study identified a QTL on LG7 for gs, QTLs on LG1, LG3 and LG6 associated with canopy temperature differential, as well as QTLs associated with grain yield under drought, HI, DTS, days to flower, days to maturity, reproductive period and plant height. These QTLs identified for traits related to higher chickpea productivity under drought stress could have important implications for accelerating the process of pyramiding of favourable genes into adapted genotypes and on future marker-assisted breeding for drought prone areas.

Abstract Drought is the most common abiotic stress limiting chickpea production in the world. Ninety percent of the worlds chickpea is produced in areas relying upon conserved, receding soil moisture, therefore, crop productivity is largely dependent on efficient utilization of available soil moisture. Because of the variability in drought pattern from year to year, trait based selection could have an advantage over selection on the basis of grain yield alone. Trait based breeding, however, requires trait dissection into components. Successful marker identification would facilitate integration of MAS procedures in breeding programs enabling the pyramiding of favourable alleles.<p> The genetic map produced in this study was based on a population of recombinant inbred lines of a cross of ILC 588 x ILC 3279 containing 52 SSR markers spanned 335 cM of the chickpea genome at an average density of 6.4 cM. A total of 13 genomic regions were shown to be associated with drought tolerance traits. Some of these genomic regions showed pleiotropic effect on multiple traits. This was also supported by the analysis of phenotypic data where these traits were found to be correlated. For example, early flowering and maturity had a strong association with high grain yield. High grain yield was also associated with better portioning ability between biomass and grain yield, i.e. harvest index. Drought tolerance score (DTS) was associated with various important traits including biomass, early flowering, early maturity.<p> This study also concluded that chickpea genotypes differed in terms of root length, root length density, root weight density and root length to weight ratio at every 20 cm soil layer up to 100 cm depth in response to water deficits. Consideration of an efficient root system vs. a larger root system is also important, since in this research, large root systems were offset by low harvest index, presumably due to the lack of assimilate available for grain growth. A restricted root system is important in environments like Western Canada, where crop growth termination is usually required prior to fall frost. This study also reported significant associations of stomatal conductance (gs) with each of HI, grain yield under drought, drought susceptibility index and drought tolerance score (DTS). Stomatal conductance can also be used to assess plant stress due to drought. Values of gs less than 250 mmol m-2s-1 during flowering indicated drought stress under greenhouse conditions. A higher degree of plant stress due to drought was shown by increased stomatal closure at midday (gs <150 mmol m-2s-1). The study of 157 RILs under natural drought stress during 2005-07 revealed that the 17 RILs which had high grain yield under drought (Group A), also tended to have higher gs than the 42 RILs that had lower grain yield (Group B). Group A had mean gs values of 390 mmol m-2s-1 during the week before flowering, while Group B had mean gs value of 330 mmol m-2s-1. Stomatal conductance increased at flowering and then sharply decreased later in the reproductive period, particularly in Group B. These findings were also supported by canopy temperature differential measurements as Group A was also able to maintain lower canopy temperature than Group B, indicating the ability of these plants to maintain adequate transpiration and a cooler canopy under drought stress. This research indicated that gs and canopy temperature can be used to assess chickpea drought stress and to screen drought tolerant genotypes. This study identified a QTL on LG7 for gs, QTLs on LG1, LG3 and LG6 associated with canopy temperature differential, as well as QTLs associated with grain yield under drought, HI, DTS, days to flower, days to maturity, reproductive period and plant height. These QTLs identified for traits related to higher chickpea productivity under drought stress could have important implications for accelerating the process of pyramiding of favourable genes into adapted genotypes and on future marker-assisted breeding for drought prone areas.