<p>Diabetic neuropathy is believed to arise due to oxidative stress following hyperglycemic situations. Uncoupling proteins (UCPs) constitute a subgroup of mitochondrial transporter proteins with putative antioxidant properties. By dissipating the proton gradient over the mitochondrial inner membrane, these proteins reduce the mitochondrial inner membrane potential (MMP), and thereby, the mitochondrial production of reactive oxygen species (ROS) is decreased. In this thesis I have examined the regulation of UCP2, UCP3, and UCP4 by the neuroprotective hormone insulin-like growth factor type 1 (IGF-1). I have also investigated the possible involvement of UCP3 in IGF-1-mediated neuroprotection following high glucose treatments. All studies were performed using human neuroblastoma SH-SY5Y cells as an <i>in vitro</i> cell model. The major findings were as follows:</p><p>i. Native SH-SY5Y cells expressed UCP2, UCP3, and UCP4. </p><p>ii. UCP3 was upregulated by IGF-1 via activation of the IGF-1 receptor. IGF-1 increased UCP3 mRNA and protein levels primarily via activation of the “classical” anti-apoptotic phosphatidyl inositol 3 (PI3)-kinase signaling pathway, as shown by incubation with specific inhibitors of the PI3-kinase and mitogen activated protein (MAP) kinase signaling pathways. </p><p>iii. UCP2 and UCP4 protein levels were only marginally or not at all regulated by IGF-1. These UCPs are probably not involved in IGF-1-mediated neuroprotection.</p><p>iv. High glucose concentrations reduced the UCP3 protein levels in highly differentiated SH-SY5Y cells. Concomitantly, the MMP and the levels of ROS and glutathione increased, whereas the number of neurites per cell was reduced. This supports an antioxidant and neuroprotective role of UCP3 </p><p>v. IGF-1 prevented the glucose-induced reduction in UCP3 protein levels. In parallel, the effects on MMP, levels of ROS and glutathione, and number of neurites per cell were abolished or significantly reduced. These data suggest that UCP3 is involved in IGF-1-mediated neuroprotection.</p>

A. fumigatus é um patógeno oportunista que causa infecções invasivas em hospedeiros imunocomprometidos. Estudos de respiração mitocondrial sugeriram a presença de componentes alternativos em sua cadeia respiratória envolvidos com processos de adaptação a ambientes adversos, como a proteína desacopladora (UCP). UCPs são proteínas mitocondriais cuja atividade dissipa o potencial de membrana gerado durante o transporte de elétrons. Um gene contendo características das três assinaturas moleculares das Proteínas Transferidoras de Energia foi clonado e sequenciado. O alinhamento das sequências genômica e de cDNA mostrou a presença de dois íntrons que, após o splicing, codifica uma proteína contendo 341 aminoácidos, com uma massa molecular de 37 kDa e um pI de 10,02. A fim de se avaliar as propriedades bioenergéticas da UCP-like, essa sequência foi clonada no vetor pYES2 e leveduras S. cerevisiae foram transformadas. Esferoplastos foram preparados e o potencial elétrico transmembrana mitocondrial foi estimado. Os resultados mostraram que o potencial de membrana de esferoplastos de leveduras expressando a proteína UCP-like foi ligeiramente menor e que o decréscimo momentâneo do potencial associado com a fosforilação do ADP foi mais lento quando comparado com o controle, indicando desacoplamento da respiração. Além disso, esse comportamento dos esferoplastos recombinantes foi similar ao controle quando GDP foi adicionado ao meio de reação, sugerindo uma inibição da proteína por esse composto. Para sua caracterização funcional em sistemas reconstituídos, a sequência foi clonada no vetor pET SUMO. A expressão foi realizada em E. coli e a proteína recombinante, purificada por cromatografia em resina de níquel, foi analisada por Western blot com anticorpos anti-(His)6-tag e anti-UCP2 e por espectrometria de massas. A formação dos lipossomos foi confirmada através de medidas de distribuição de partícula por espalhamento de luz dinâmico, as quais sugeriram a formação de vesículas estáveis. Em adição, foi investigada a participação da UCP-like na proteção do A. fumigatus contra danos oxidativos. O nível de mRNA foi determinado por PCR em tempo real na presença de paraquat e menadiona. Em A. fumigatus, a presença dessas drogas pró-oxidantes resultou em um aumento no nível de mRNA desse gene, sugerindo que essa proteína possa também fazer parte de um sistema de defesa antioxidante do fungo. / A. fumigatus is an opportunistic pathogen that causes invasive infections in immunocompromised hosts. Mitochondrial respiration studies suggested the presence of alternative components on its respiration chain, which are involved with the adaptation to hostile environments, such as the uncoupling protein (UCP). UCPs are mitochondrial proteins whose activity dissipates the membrane potential generated during electron transport. A gene containing features of three molecular signatures of Energy Carrier Protein was cloned and sequenced. The alignment between the cDNA and genomic DNA sequences revealed the existence of two introns which after splicing encodes a 341 amino acids protein with a molecular mass of 37 kDa and a pI of 10.02. In order to study bioenergetics properties of UCP-like, the cDNA sequence was cloned into pYES2 vector and transformed in S. cerevisiae. Spheroplasts were prepared and the mitochondrial electrical transmembrane potential was estimated. The results showed that, compared with control cells, mitochondrial electrical transmembrane potential of transformant spheroplasts was slightly smaller and the transient potential decrease associated with ADP phosphorylation was longer, indicating uncoupling of respiration. Moreover, this behavior of recombinant spheroplasts was similar to control cells when GDP was added to the reaction medium, suggesting the inhibition of uncoupling protein. For its functional characterization in reconstituted systems, the cDNA sequence was cloned into pET SUMO vector. The expression was carried out in E. coli and the recombinant protein, purified by chromatography on a nickel-chelating resin, was analyzed by Western blot using anti- (His)6-tag or UCP2 antibodies and by mass spectrometry. Liposome formation was confirmed by light scattering, suggesting the formation of stable vesicles. In addition, the participation of UCP-like in A. fumigatus protection against oxidative damage was investigated. mRNA level was determined by real time PCR in the presence of paraquat and menadione. In A. fumigatus, the presence of these pro-oxidants drugs resulted in increased mRNA level of this gene, suggesting that this protein might also be part of an antioxidant defense system of this fungus.

Mitochondria are organelles present in eukaryotic cells that play a key role in regulating cells’ metabolic processes as well as cell death. The main function of mitochondria is to produce ATP, by oxidizing nutrients in a process called oxidative phosphorylation (OXPHOS). Besides this, mitochondria also play a critical role in calcium homeostasis, cell signaling, and apoptosis. Mitochondrial dysfunction is implicated in a plethora of diseases including neurodegenerative diseases, metabolic disorders as well as ageing and cancer. The triphenylphosphonium (TPP+) moiety has been used as a carrier to direct a wide variety of therapeutic and diagnostic cargo to mitochondria, in an effort to study and treat mitochondrial dysfunction. Studies in recent years show that TPP+ is not an inert carrier as previously thought. Many TPP+ conjugates have been shown to exert a negative effect on mitochondrial and cellular bioenergetics by decreasing the efficiency of OXPHOS. This phenomenon is called ‘mitochondrial uncoupling’. While mitochondrial uncoupling is undesirable for the TPP+ moiety to function as a carrier of cargo to mitochondria, controlled uncoupling has therapeutic applications in treatment of obesity and cancer. The extent of mitochondrial accumulation as well as potency of mitochondrial uncoupling caused by the TPP+ moiety increases with increasing length of the linker functionality in TPP+ conjugates. Most of the studies to date have focused on altering the linker length of the TPP+-linker-cargo conjugate to optimize the balance between safety and efficacy. However, very little is known about how structural modification of the TPP+ moiety itself affects mitochondrial uncoupling potency. Therefore, there is a need to understand the structure activity relationship (SAR) between modification of TPP+ structure and the effect of these structural changes on mitochondrial uncoupling and uptake. Towards this end, the first goal of this study was to understand the effect of modulating electron density on the phosphorus atom of TPP+ on the potency of uncoupling OXPHOS. Modifications to the TPP+ moiety included substitution of electron withdrawing and donating groups on the phenyl rings of TPP+, and replacing phenyl rings with bulkier napthyl rings. Modified TPP+ moieties were conjugated to five different linkers, which varied in length and lipophilicity, and the effect of these conjugates on mitochondrial bioenergetics was studied. The second goal of the study was to evaluate if the propensity of TPP+ to uncouple mitochondrial respiration can be modulated, independently of mitochondrial uptake. For this purpose, the uptake of modified TPP+-linker conjugates into isolated mitochondria and the uptake of fluorescently labeled modified TPP+-linker conjugates into mitochondria within whole cells was investigated. The ability of modified TPP+ to protect cells from oxidative stress by successfully delivering an anti-oxidant cargo to mitochondria within cells was also assessed. The results of these studies establish the first SAR for modulating TPP+ structure to either eliminate, optimize, or maximize uncoupling of mitochondrial OXPHOS, and led to identification of lead molecules for potential applications in the fields of mitochondrial delivery, anti-obesity therapy and anti-cancer therapy.

Diabetic neuropathy is believed to arise due to oxidative stress following hyperglycemic situations. Uncoupling proteins (UCPs) constitute a subgroup of mitochondrial transporter proteins with putative antioxidant properties. By dissipating the proton gradient over the mitochondrial inner membrane, these proteins reduce the mitochondrial inner membrane potential (MMP), and thereby, the mitochondrial production of reactive oxygen species (ROS) is decreased. In this thesis I have examined the regulation of UCP2, UCP3, and UCP4 by the neuroprotective hormone insulin-like growth factor type 1 (IGF-1). I have also investigated the possible involvement of UCP3 in IGF-1-mediated neuroprotection following high glucose treatments. All studies were performed using human neuroblastoma SH-SY5Y cells as an in vitro cell model. The major findings were as follows: i. Native SH-SY5Y cells expressed UCP2, UCP3, and UCP4. ii. UCP3 was upregulated by IGF-1 via activation of the IGF-1 receptor. IGF-1 increased UCP3 mRNA and protein levels primarily via activation of the “classical” anti-apoptotic phosphatidyl inositol 3 (PI3)-kinase signaling pathway, as shown by incubation with specific inhibitors of the PI3-kinase and mitogen activated protein (MAP) kinase signaling pathways. iii. UCP2 and UCP4 protein levels were only marginally or not at all regulated by IGF-1. These UCPs are probably not involved in IGF-1-mediated neuroprotection. iv. High glucose concentrations reduced the UCP3 protein levels in highly differentiated SH-SY5Y cells. Concomitantly, the MMP and the levels of ROS and glutathione increased, whereas the number of neurites per cell was reduced. This supports an antioxidant and neuroprotective role of UCP3 v. IGF-1 prevented the glucose-induced reduction in UCP3 protein levels. In parallel, the effects on MMP, levels of ROS and glutathione, and number of neurites per cell were abolished or significantly reduced. These data suggest that UCP3 is involved in IGF-1-mediated neuroprotection.

In the Ottawa Hospital Weight Management Clinic, we have previously identified subpopulations of patients in the upper and lower quintiles for rate of weight loss, and characterized them as ‘obese diet sensitive’ (ODS) and ‘obese diet resistant’ (ODR) patient groups, respectively. Skeletal muscle is a major contributor to basal metabolic rate and mitochondrial proton leak in skeletal muscle can account for up to 50 % of resting oxygen consumption. The overall aim of this research is to explore differences in mitochondrial function in human primary myotubes from ODS and ODR subjects. Subsets of ODS and ODR subjects (n = 9/group) who followed a hypocaloric clinical weight loss program at the Ottawa Weight Management Clinic consented to a muscle (vastus lateralis) biopsy. Human primary myoblasts obtained from biopsies were immunopurified and differentiated into myotubes. Mitochondrial function and distribution were compared in intact myotubes from ODS and ODR subjects. Mitochondrial proton leak was significantly lower (p< 0.05) in ODR myotubes compared to ODS myotubes, independent of whether cells were differentiated in low or high glucose medium. In addition, in low glucose medium, ODR myotubes had higher MnSOD protein levels compared to ODS myotubes (p< 0.05). However, there were no significant differences in mitochondrial content, mitochondrial membrane potential, cellular ROS levels or ATP content between ODS and ODR myotubes. Overall, our in vitro mitochondrial proton leak results are consistent with our previous ex vivo results. Future research should examine the possibility that differences in proton leak between ODS and ODR groups may be related to mechanisms of cellular ROS regulation.

In the Ottawa Hospital Weight Management Clinic, we have previously identified subpopulations of patients in the upper and lower quintiles for rate of weight loss, and characterized them as ‘obese diet sensitive’ (ODS) and ‘obese diet resistant’ (ODR) patient groups, respectively. Skeletal muscle is a major contributor to basal metabolic rate and mitochondrial proton leak in skeletal muscle can account for up to 50 % of resting oxygen consumption. The overall aim of this research is to explore differences in mitochondrial function in human primary myotubes from ODS and ODR subjects. Subsets of ODS and ODR subjects (n = 9/group) who followed a hypocaloric clinical weight loss program at the Ottawa Weight Management Clinic consented to a muscle (vastus lateralis) biopsy. Human primary myoblasts obtained from biopsies were immunopurified and differentiated into myotubes. Mitochondrial function and distribution were compared in intact myotubes from ODS and ODR subjects. Mitochondrial proton leak was significantly lower (p< 0.05) in ODR myotubes compared to ODS myotubes, independent of whether cells were differentiated in low or high glucose medium. In addition, in low glucose medium, ODR myotubes had higher MnSOD protein levels compared to ODS myotubes (p< 0.05). However, there were no significant differences in mitochondrial content, mitochondrial membrane potential, cellular ROS levels or ATP content between ODS and ODR myotubes. Overall, our in vitro mitochondrial proton leak results are consistent with our previous ex vivo results. Future research should examine the possibility that differences in proton leak between ODS and ODR groups may be related to mechanisms of cellular ROS regulation.

In the Ottawa Hospital Weight Management Clinic, we have previously identified subpopulations of patients in the upper and lower quintiles for rate of weight loss, and characterized them as ‘obese diet sensitive’ (ODS) and ‘obese diet resistant’ (ODR) patient groups, respectively. Skeletal muscle is a major contributor to basal metabolic rate and mitochondrial proton leak in skeletal muscle can account for up to 50 % of resting oxygen consumption. The overall aim of this research is to explore differences in mitochondrial function in human primary myotubes from ODS and ODR subjects. Subsets of ODS and ODR subjects (n = 9/group) who followed a hypocaloric clinical weight loss program at the Ottawa Weight Management Clinic consented to a muscle (vastus lateralis) biopsy. Human primary myoblasts obtained from biopsies were immunopurified and differentiated into myotubes. Mitochondrial function and distribution were compared in intact myotubes from ODS and ODR subjects. Mitochondrial proton leak was significantly lower (p< 0.05) in ODR myotubes compared to ODS myotubes, independent of whether cells were differentiated in low or high glucose medium. In addition, in low glucose medium, ODR myotubes had higher MnSOD protein levels compared to ODS myotubes (p< 0.05). However, there were no significant differences in mitochondrial content, mitochondrial membrane potential, cellular ROS levels or ATP content between ODS and ODR myotubes. Overall, our in vitro mitochondrial proton leak results are consistent with our previous ex vivo results. Future research should examine the possibility that differences in proton leak between ODS and ODR groups may be related to mechanisms of cellular ROS regulation.

In the Ottawa Hospital Weight Management Clinic, we have previously identified subpopulations of patients in the upper and lower quintiles for rate of weight loss, and characterized them as ‘obese diet sensitive’ (ODS) and ‘obese diet resistant’ (ODR) patient groups, respectively. Skeletal muscle is a major contributor to basal metabolic rate and mitochondrial proton leak in skeletal muscle can account for up to 50 % of resting oxygen consumption. The overall aim of this research is to explore differences in mitochondrial function in human primary myotubes from ODS and ODR subjects. Subsets of ODS and ODR subjects (n = 9/group) who followed a hypocaloric clinical weight loss program at the Ottawa Weight Management Clinic consented to a muscle (vastus lateralis) biopsy. Human primary myoblasts obtained from biopsies were immunopurified and differentiated into myotubes. Mitochondrial function and distribution were compared in intact myotubes from ODS and ODR subjects. Mitochondrial proton leak was significantly lower (p< 0.05) in ODR myotubes compared to ODS myotubes, independent of whether cells were differentiated in low or high glucose medium. In addition, in low glucose medium, ODR myotubes had higher MnSOD protein levels compared to ODS myotubes (p< 0.05). However, there were no significant differences in mitochondrial content, mitochondrial membrane potential, cellular ROS levels or ATP content between ODS and ODR myotubes. Overall, our in vitro mitochondrial proton leak results are consistent with our previous ex vivo results. Future research should examine the possibility that differences in proton leak between ODS and ODR groups may be related to mechanisms of cellular ROS regulation.

A. fumigatus é um patógeno oportunista que causa infecções invasivas em hospedeiros imunocomprometidos. Estudos de respiração mitocondrial sugeriram a presença de componentes alternativos em sua cadeia respiratória envolvidos com processos de adaptação a ambientes adversos, como a proteína desacopladora (UCP). UCPs são proteínas mitocondriais cuja atividade dissipa o potencial de membrana gerado durante o transporte de elétrons. Um gene contendo características das três assinaturas moleculares das Proteínas Transferidoras de Energia foi clonado e sequenciado. O alinhamento das sequências genômica e de cDNA mostrou a presença de dois íntrons que, após o splicing, codifica uma proteína contendo 341 aminoácidos, com uma massa molecular de 37 kDa e um pI de 10,02. A fim de se avaliar as propriedades bioenergéticas da UCP-like, essa sequência foi clonada no vetor pYES2 e leveduras S. cerevisiae foram transformadas. Esferoplastos foram preparados e o potencial elétrico transmembrana mitocondrial foi estimado. Os resultados mostraram que o potencial de membrana de esferoplastos de leveduras expressando a proteína UCP-like foi ligeiramente menor e que o decréscimo momentâneo do potencial associado com a fosforilação do ADP foi mais lento quando comparado com o controle, indicando desacoplamento da respiração. Além disso, esse comportamento dos esferoplastos recombinantes foi similar ao controle quando GDP foi adicionado ao meio de reação, sugerindo uma inibição da proteína por esse composto. Para sua caracterização funcional em sistemas reconstituídos, a sequência foi clonada no vetor pET SUMO. A expressão foi realizada em E. coli e a proteína recombinante, purificada por cromatografia em resina de níquel, foi analisada por Western blot com anticorpos anti-(His)6-tag e anti-UCP2 e por espectrometria de massas. A formação dos lipossomos foi confirmada através de medidas de distribuição de partícula por espalhamento de luz dinâmico, as quais sugeriram a formação de vesículas estáveis. Em adição, foi investigada a participação da UCP-like na proteção do A. fumigatus contra danos oxidativos. O nível de mRNA foi determinado por PCR em tempo real na presença de paraquat e menadiona. Em A. fumigatus, a presença dessas drogas pró-oxidantes resultou em um aumento no nível de mRNA desse gene, sugerindo que essa proteína possa também fazer parte de um sistema de defesa antioxidante do fungo. / A. fumigatus is an opportunistic pathogen that causes invasive infections in immunocompromised hosts. Mitochondrial respiration studies suggested the presence of alternative components on its respiration chain, which are involved with the adaptation to hostile environments, such as the uncoupling protein (UCP). UCPs are mitochondrial proteins whose activity dissipates the membrane potential generated during electron transport. A gene containing features of three molecular signatures of Energy Carrier Protein was cloned and sequenced. The alignment between the cDNA and genomic DNA sequences revealed the existence of two introns which after splicing encodes a 341 amino acids protein with a molecular mass of 37 kDa and a pI of 10.02. In order to study bioenergetics properties of UCP-like, the cDNA sequence was cloned into pYES2 vector and transformed in S. cerevisiae. Spheroplasts were prepared and the mitochondrial electrical transmembrane potential was estimated. The results showed that, compared with control cells, mitochondrial electrical transmembrane potential of transformant spheroplasts was slightly smaller and the transient potential decrease associated with ADP phosphorylation was longer, indicating uncoupling of respiration. Moreover, this behavior of recombinant spheroplasts was similar to control cells when GDP was added to the reaction medium, suggesting the inhibition of uncoupling protein. For its functional characterization in reconstituted systems, the cDNA sequence was cloned into pET SUMO vector. The expression was carried out in E. coli and the recombinant protein, purified by chromatography on a nickel-chelating resin, was analyzed by Western blot using anti- (His)6-tag or UCP2 antibodies and by mass spectrometry. Liposome formation was confirmed by light scattering, suggesting the formation of stable vesicles. In addition, the participation of UCP-like in A. fumigatus protection against oxidative damage was investigated. mRNA level was determined by real time PCR in the presence of paraquat and menadione. In A. fumigatus, the presence of these pro-oxidants drugs resulted in increased mRNA level of this gene, suggesting that this protein might also be part of an antioxidant defense system of this fungus.

京都大学 / 0048 / 新制・課程博士 / 博士(農学) / 甲第20068号 / 農博第2197号 / 新制||農||1046(附属図書館) / 学位論文||H28||N5024(農学部図書室) / 京都大学大学院農学研究科食品生物科学専攻 / (主査)教授 河田 照雄, 教授 金本 龍平, 教授 谷 史人 / 学位規則第4条第1項該当 / Doctor of Agricultural Science / Kyoto University / DGAM