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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
11

The Mechanisms of Protective Function of DJ-1 in Parkinson’s Models of Neuronal Loss: VHL and PON2

Parsanejad, Mohammad 23 April 2013 (has links)
Parkinson's disease (PD) is the most common neurodegenerative motor disorder, whose clinical features are rest tremor, bradykinesia, muscular rigidity and postural instability. Although most reported cases are sporadic, a handful of familial cases and their causative genes have been identified. Loss-of-function mutations in DJ-1, one of these genes, are responsible for 1% of familial PD cases. Our laboratory has previously reported that DJ-1- lacking neurons are sensitive to oxidative stress, induced by hydrogen peroxide or the neurotoxin MPTP. To investigate the possible mechanisms through which DJ-1 protects against oxidative stress, we performed a proteomic screen and identified Von Hippel Lindau (VHL) and Paraoxonase2 (PON2) as potential DJ-1 interacting partners. VHL is an E3 ubiquitin ligase which, in normal conditions, poly-ubiquitinates HIF-1 , a subunit of a master hypoxic/oxidative stress transcription factor, whose function is protective in oxidative and hypoxic stresses. In the present study, we provided further evidence of interaction of DJ-1 with VHL. We also demonstrated that HIF-1 protein level, as an indicator of VHL activity, is lower in cells lacking DJ-1, suggesting the inhibitory role of DJ-1 on VHL. Our in vitro studies also showed that DJ-1 inhibits ubiquitin ligase activity of VHL on HIF-1 by reducing the VHL-HIF-1 interaction. Importantly, accumulation of HIF-1 protects embryonic cortical neurons against MPP+ induced neuronal death. Finally, we confirmed the impairment of HIF-1 response to oxidative stress in human lymphoblastoids of DJ-1-linked PD cases. In the second part of this study, we demonstrated the interaction of DJ-1 and PON2. Interestingly, PON2 lactonase activity is reduced in DJ-1 deficient cells which could be rescued by re-introduction of DJ-1, suggesting a modulating role of DJ-1 on PON2 activity. In addition, PON2 deficiency, like DJ-1 deficiency, hypersensitizes neurons to MPP+, which could be rescued by over-expression of PON2 in both cases. Taken together, our data provide evidence that DJ-1 exerts its protective role by inhibiting VHL activity, enhancing HIF-1 stability, and increasing PON2 pro-survival function in PD models.
12

Avaliação das alterações do gene VHL nos carcinomas renais de células claras associados à síndrome de von Hippel-Lindau

João Paulo Castello Branco Vidal 09 February 2010 (has links)
A Síndrome de von Hippel-Lindau é uma doença hereditária multissistêmica, causada por mutações germinativas no gene VHL que predispõe o portador a manifestações benignas e malignas em diversos órgãos. Entre esses eventos, o carcinoma de células claras renais (CRC) é o de pior prognóstico, com uma penetração média de 25% e sendo a principal causa de morte nestes pacientes. Os CRCs são tumores agressivos, pouco responsivos à quimioterapia e imunoterapia, e muitas vezes são diagnosticados em estágios avançados. Podem estar associados a síndromes hereditárias como o VHL ou apresentar a forma esporádica. Caracteristicamente, o CRC é provocado pela inativação dos dois alelos do gene VHL. Nos casos associados ao VHL, um alelo do gene VHL sofre uma mutação germinativa e um segundo evento mutacional somático nas células do tumor. Por outro lado, na forma esporádica, o CRC é resultado de dois eventos somáticos adquiridos, que incluem uma combinação de metilação do promotor, mutações pontuais que afetam a sequência de leitura aberta (ORF) e rearranjos cromossômicos, principalmente perda de heterozigosidade (LOH). Embora os eventos somáticos nos CRCs esporádicos já tenham sido explorados em outros estudos, os mecanismos de inativação somáticos do gene VHL nos CRCs associados à síndrome ainda não foram bem descritos. Este estudo avaliou os eventos somáticos no gene VHL em CRCs retirados em procedimentos cirúrgicos de pacientes portadores da síndrome. Os eventos somáticos em vários tumores de um mesmo paciente foram comparados a fim de verificarmos se essas mutações são independentes e não clonais. Oito pacientes com amostras CRCs previamente armazenadas no BNT tiveram sua mutação germinativa no gene VHL caracterizada por sequenciamento ou MLPA. Todas as amostras foram submetidas a uma revisão da patologia e macrodissecadas sempre que necessário. Para a análise das manifestações somáticas do gene VHL, o DNA foi extraído de 30 CRCs conservados em RNA latter ou formaldeído (parafina). As amostras foram analisadas quanto à metilação da região promotora do gene pelo método MS-PCR e para mutações pontuais por sequenciamento. Fomos capazes de detectar a mutação somática em 25 dos 30 tumores, incluindo uma mutação pontual e dois tumores diferentes de um mesmo paciente, nenhuma microdeleção e 23 grandes deleções. Em contraste com a literatura, nenhum dos tumores apresentou metilação no promotor do VHL. Devido ao grande número de achados LOH e da resolução limitada da técnica de MLPA para avaliar a extensão dos rearranjos cromossômicos em 3p, não foi possível concluir a análise de clonalidade dos tumores. Um estudo exploratório para caracterizar ganhos e perdas genômicas utilizando a técnica CNV array está em andamento em nosso laboratório. / The von Hippel-Lindau syndrome (VHL) is a multissystemic hereditary disease, caused by germline mutations in the VHL gene that predisposes the carrier to benign and malignant manifestations in different organs. Among these events, the clear cell renal carcinoma (RCC) is the most fearful, with an average penetration of 25% being the leading cause of death in these patients. RCCs are aggressive tumors, poorly responsive to chemo- and immunotherapy that are often diagnosed in advanced stages. They can be associated with hereditary syndromes such as VHL or present in a sporadic form. Characteristically, RCCs carrier the inactivation of the two alleles of VHL gene. In cases associated with VHL, one allele of the VHL gene is mutated in the germline, and the second mutational event occurs in the somatic cells of the tumor. On the other hand, in the sporadic form, RCCs results of two acquired somatic events, which includes a combination of methylation of the promoter, point mutations affecting the ORF, and rearrangements mainly loss of heterozigosity (LOH). Although somatic events in sporadic RCC have been explored before by others, the mechanisms of somatic VHL gene inactivation in VHL-associated RCCs have been poorly characterized. This study evaluated the somatic mutational events in the VHL gene of RCCs removed from VHL patients in therapeutic surgical procedures. The somatic events in multiple tumors from the same patient were compared in order to analyze whether these mutations are independent and not clonal. Eight patients with RCCs samples previously stored at BNT had their germline VHL gene mutation characterized by sequencing or MLPA. All samples were submitted to a pathology review and macrodissected whenever necessary. For the analysis of somatic events of VHL gene, DNA from 30 RCCs were extracted from either RNA later or archival formalin-fixed, paraffin-embedded tissue sections. Samples were analyzed for VHL gene promoter methylation by MS-PCR, and for point mutation in the coding DNA by sequencing. We were able to detect the somatic mutation in 25 of the 30 tumors, including one point mutations in two different tumors of the same patient, no micro-deletions, and 23 large deletions. In contrast to the literature, none of the tumors have shown methylation on the VHL promoter. Because of the large number of LOH findings, and the limited resolution of MLPA to evaluate the extension of 3p chromosomal rearrangements, we could not conclude the analysis of tumor clonality. An exploratory study to characterize genomic gains and losses using CNV-array technique are ongoing in our laboratory.
13

Avaliação das alterações do gene VHL nos carcinomas renais de células claras associados à síndrome de von Hippel-Lindau

João Paulo Castello Branco Vidal 09 February 2010 (has links)
A Síndrome de von Hippel-Lindau é uma doença hereditária multissistêmica, causada por mutações germinativas no gene VHL que predispõe o portador a manifestações benignas e malignas em diversos órgãos. Entre esses eventos, o carcinoma de células claras renais (CRC) é o de pior prognóstico, com uma penetração média de 25% e sendo a principal causa de morte nestes pacientes. Os CRCs são tumores agressivos, pouco responsivos à quimioterapia e imunoterapia, e muitas vezes são diagnosticados em estágios avançados. Podem estar associados a síndromes hereditárias como o VHL ou apresentar a forma esporádica. Caracteristicamente, o CRC é provocado pela inativação dos dois alelos do gene VHL. Nos casos associados ao VHL, um alelo do gene VHL sofre uma mutação germinativa e um segundo evento mutacional somático nas células do tumor. Por outro lado, na forma esporádica, o CRC é resultado de dois eventos somáticos adquiridos, que incluem uma combinação de metilação do promotor, mutações pontuais que afetam a sequência de leitura aberta (ORF) e rearranjos cromossômicos, principalmente perda de heterozigosidade (LOH). Embora os eventos somáticos nos CRCs esporádicos já tenham sido explorados em outros estudos, os mecanismos de inativação somáticos do gene VHL nos CRCs associados à síndrome ainda não foram bem descritos. Este estudo avaliou os eventos somáticos no gene VHL em CRCs retirados em procedimentos cirúrgicos de pacientes portadores da síndrome. Os eventos somáticos em vários tumores de um mesmo paciente foram comparados a fim de verificarmos se essas mutações são independentes e não clonais. Oito pacientes com amostras CRCs previamente armazenadas no BNT tiveram sua mutação germinativa no gene VHL caracterizada por sequenciamento ou MLPA. Todas as amostras foram submetidas a uma revisão da patologia e macrodissecadas sempre que necessário. Para a análise das manifestações somáticas do gene VHL, o DNA foi extraído de 30 CRCs conservados em RNA latter ou formaldeído (parafina). As amostras foram analisadas quanto à metilação da região promotora do gene pelo método MS-PCR e para mutações pontuais por sequenciamento. Fomos capazes de detectar a mutação somática em 25 dos 30 tumores, incluindo uma mutação pontual e dois tumores diferentes de um mesmo paciente, nenhuma microdeleção e 23 grandes deleções. Em contraste com a literatura, nenhum dos tumores apresentou metilação no promotor do VHL. Devido ao grande número de achados LOH e da resolução limitada da técnica de MLPA para avaliar a extensão dos rearranjos cromossômicos em 3p, não foi possível concluir a análise de clonalidade dos tumores. Um estudo exploratório para caracterizar ganhos e perdas genômicas utilizando a técnica CNV array está em andamento em nosso laboratório. / The von Hippel-Lindau syndrome (VHL) is a multissystemic hereditary disease, caused by germline mutations in the VHL gene that predisposes the carrier to benign and malignant manifestations in different organs. Among these events, the clear cell renal carcinoma (RCC) is the most fearful, with an average penetration of 25% being the leading cause of death in these patients. RCCs are aggressive tumors, poorly responsive to chemo- and immunotherapy that are often diagnosed in advanced stages. They can be associated with hereditary syndromes such as VHL or present in a sporadic form. Characteristically, RCCs carrier the inactivation of the two alleles of VHL gene. In cases associated with VHL, one allele of the VHL gene is mutated in the germline, and the second mutational event occurs in the somatic cells of the tumor. On the other hand, in the sporadic form, RCCs results of two acquired somatic events, which includes a combination of methylation of the promoter, point mutations affecting the ORF, and rearrangements mainly loss of heterozigosity (LOH). Although somatic events in sporadic RCC have been explored before by others, the mechanisms of somatic VHL gene inactivation in VHL-associated RCCs have been poorly characterized. This study evaluated the somatic mutational events in the VHL gene of RCCs removed from VHL patients in therapeutic surgical procedures. The somatic events in multiple tumors from the same patient were compared in order to analyze whether these mutations are independent and not clonal. Eight patients with RCCs samples previously stored at BNT had their germline VHL gene mutation characterized by sequencing or MLPA. All samples were submitted to a pathology review and macrodissected whenever necessary. For the analysis of somatic events of VHL gene, DNA from 30 RCCs were extracted from either RNA later or archival formalin-fixed, paraffin-embedded tissue sections. Samples were analyzed for VHL gene promoter methylation by MS-PCR, and for point mutation in the coding DNA by sequencing. We were able to detect the somatic mutation in 25 of the 30 tumors, including one point mutations in two different tumors of the same patient, no micro-deletions, and 23 large deletions. In contrast to the literature, none of the tumors have shown methylation on the VHL promoter. Because of the large number of LOH findings, and the limited resolution of MLPA to evaluate the extension of 3p chromosomal rearrangements, we could not conclude the analysis of tumor clonality. An exploratory study to characterize genomic gains and losses using CNV-array technique are ongoing in our laboratory.
14

The Mechanisms of Protective Function of DJ-1 in Parkinson’s Models of Neuronal Loss: VHL and PON2

Parsanejad, Mohammad January 2013 (has links)
Parkinson's disease (PD) is the most common neurodegenerative motor disorder, whose clinical features are rest tremor, bradykinesia, muscular rigidity and postural instability. Although most reported cases are sporadic, a handful of familial cases and their causative genes have been identified. Loss-of-function mutations in DJ-1, one of these genes, are responsible for 1% of familial PD cases. Our laboratory has previously reported that DJ-1- lacking neurons are sensitive to oxidative stress, induced by hydrogen peroxide or the neurotoxin MPTP. To investigate the possible mechanisms through which DJ-1 protects against oxidative stress, we performed a proteomic screen and identified Von Hippel Lindau (VHL) and Paraoxonase2 (PON2) as potential DJ-1 interacting partners. VHL is an E3 ubiquitin ligase which, in normal conditions, poly-ubiquitinates HIF-1 , a subunit of a master hypoxic/oxidative stress transcription factor, whose function is protective in oxidative and hypoxic stresses. In the present study, we provided further evidence of interaction of DJ-1 with VHL. We also demonstrated that HIF-1 protein level, as an indicator of VHL activity, is lower in cells lacking DJ-1, suggesting the inhibitory role of DJ-1 on VHL. Our in vitro studies also showed that DJ-1 inhibits ubiquitin ligase activity of VHL on HIF-1 by reducing the VHL-HIF-1 interaction. Importantly, accumulation of HIF-1 protects embryonic cortical neurons against MPP+ induced neuronal death. Finally, we confirmed the impairment of HIF-1 response to oxidative stress in human lymphoblastoids of DJ-1-linked PD cases. In the second part of this study, we demonstrated the interaction of DJ-1 and PON2. Interestingly, PON2 lactonase activity is reduced in DJ-1 deficient cells which could be rescued by re-introduction of DJ-1, suggesting a modulating role of DJ-1 on PON2 activity. In addition, PON2 deficiency, like DJ-1 deficiency, hypersensitizes neurons to MPP+, which could be rescued by over-expression of PON2 in both cases. Taken together, our data provide evidence that DJ-1 exerts its protective role by inhibiting VHL activity, enhancing HIF-1 stability, and increasing PON2 pro-survival function in PD models.
15

Investigation of the role of VHL-HIF signaling in DNA repair and apoptosis in zebrafish

Kim, H.R., Santhakumar, K., Markham, E., Baldera, D., Greenald, D., Bryant, H.E., El-Khamisy, Sherif, van Eeden, F.J. 25 August 2020 (has links)
Yes / pVHL is a tumor suppressor. The lack of its function leads to various tumors, among which ccRCC (clear cell renal cell carcinoma) has the most serious outcome due to its resistance to chemotherapies and radiotherapies. Although HIF promotes the progression of ccRCC, the precise mechanism by which the loss of VHL leads to tumor initiation remains unclear. We exploited two zebrafish vhl mutants, vhl and vll, and Tg(phd3 / The work was supported by two BBSRC Grants: BB/R015457/1 and BB/M02332X/1.
16

Etude du « dialogue » entre cellules tumorales rénales et cellules NK / Study of the “dialogue” between renal cancer cells and NK cells

Wittnebel, Sebastian 08 February 2012 (has links)
Le cancer du rein (CCR) est une néoplasie immunogène. Le travail présenté ici porte sur les interactions entre les cellules Natural Killer (NK) et les cellules du cancer du rein. Les caractéristiques particulières des cellules tumorales rénales, telles que les mutations de VHL, l’événement phare dans le développement des cancers du rein, ou encore l’expression d’une forme membranaire de la cytokine IL-15 interfèrent avec l’activation des cellules NK. On a identifié une forme membranaire de la cytokine IL-15 particulière sur les cellules tumorales rénales, qui contrôlerait l’homéostasie des cellules NK au sein de la tumeur. Par ailleurs, on montre que certaines mutations de VHL des cellules du cancer du rein favorisent l’activation des cellules NK en diminuant l’expression des molécules HLA de classe I par les cellules tumorales. / Renal cell carcinomas (RCC) are immunogenic. The work presented here describes the interactions between NK cells and RCC. We have investigated particular characteristics of RCC, like the mutation of the VHL gene, the key event in carcinogenesis of kidney cancers of the clear cell type, or a particular expression of IL-15 by the tumor cells. We show that certain RCC cell lines express a unique form of membrane bound IL-15. Our work indicates that the expression of IL-15 by the tumor cells might play a role in the homeostasis of NK cells infiltrating kidney cancers. Furthermore we show that mutations of the VHL gene cause diminished HLA expression favoring thereby the activation of NK.
17

Identificação e caracterização de mutações germinativas no gene VHL em famílias com a doença de von Hippel-Lindau / Identification and characterization of germline mutations in the VHL gene in families with von Hippel-Lindau disease

Gomy, Israel 02 July 2008 (has links)
A doença de von Hippel-Lindau (VHL) é uma síndrome de câncer familial herdada de forma autossômica dominante que predispõe ao desenvolvimento de diversos tipos de neoplasias benignas e malignas. É causada por mutações germinativas e somáticas no gene VHL e tem uma incidência aproximada de um a cada 36.000 nascimentos. O gene VHL é um supressor tumoral e codifica a proteína VHL, a qual possui, entre outras funções, uma atividade ubiquitina-ligase, responsável pela poliubiquitinização e degradação proteassômica da subunidade alfa do fator induzido por hipóxia (HIF) na presença de oxigênio. As principais características da doença de VHL são: hemangioblastomas de sistema nervoso central (SNC), principalmente do cerebelo e medula espinhal; angiomas de retina e carcinoma renal de células claras. A probabilidade de desenvolver cada um desses tumores ao longo da vida é estimada em maior que 70%, podendo manifestar-se desde a infância até a fase adulta, principalmente entre a 2ª e 3ª décadas de vida. Classifica-se a doença de VHL conforme a ausência (tipo 1) ou presença de feocromocitoma (tipo 2). A doença do tipo 2 é causada, essencialmente, por mutações missense no gene VHL. As mutações podem ser grandes deleções (20%) ou pontuais (80%) do tipo missense, frameshift, nonsense ou em regiões de splicing. O teste genético é considerado padrão para o manejo clínico dos pacientes e dos familiares em risco, pois permite o diagnóstico e o tratamento precoce das neoplasias, melhorando assim a expectativa de vida. Técnicas de biologia molecular, como o seqüenciamento direto do DNA e o Southern blotting quantitativo, permitem a detecção de mutações germinativas em até 100% dos casos. Técnicas mais recentes, como o PCR quantitativo em tempo real e o MLPA, têm sido empregadas para uma detecção mais eficaz de grandes deleções no gene VHL. Os objetivos do presente estudo foram: (1) diagnosticar os pacientes com suspeita da doença de VHL; (2) identificar e caracterizar mutações germinativas pontuais no gene VHL nos pacientes e em seus parentes de 1º grau; (3) fornecer o aconselhamento genético pré e pós-teste. Dos 37 indivíduos com suspeita da doença de VHL, 14 pacientes de sete famílias diferentes preencheram os critérios diagnósticos. Um paciente apresentou hemangioblastoma cerebelar isolado e sete parentes de 1º grau estavam assintomáticos. Foram realizadas as técnicas de PCR, RFLP e seqüenciamento direto do DNA genômico e após clonagem. Foram identificadas quatro mutações pontuais na região codificadora do gene VHL em quatro famílias diferentes, sendo que duas delas haviam sido descritas na literatura [c.226_228delTTC (F76del), c.217C>T (Q73X)]. As outras duas mutações são descritas pela primeira vez neste estudo e afetam o sitio de splicing (IVS1-1 G>A, IVS2-1 G>C). É provável que as demais três famílias sejam portadoras de deleções germinativas no gene VHL. Em resumo, os resultados apresentados neste estudo ampliam o conhecimento da base molecular da doença de VHL e consiste na primeira pesquisa de pós-graduação produzida pelo ambulatório de aconselhamento genético do câncer do HCFMRP-USP. / Von Hippel-Lindau disease (VHL) is an autosomal dominant hereditary cancer syndrome that predisposes to the development of a variety of benign and malignant tumors. VHL is caused by germline and somatic mutations in the VHL gene and it has an incidence of approximately one in 36,000 livebirths. The VHL gene is a tumor suppressor that is translated into the VHL protein, which has many functions, mainly an ubiquitin-ligase activity, responsible for the polyubiquitylation and proteasomal degradation of the alpha subunit of the hipoxia-inducible factor (HIF) in the presence of oxygen. The main clinical features of VHL are: CNS hemangioblastomas, especially of the cerebellum and spinal cord; retinal angiomas and clear-cell renal carcinomas. The lifetime probability of developing one of these tumors is estimated at more than 70%, whichever may present since childhood until adulthood, more often during the 2nd and 3rd decades. VHL is classified into type 1 (without pheochromocytoma) and type 2 (with pheochromocytoma), the latter being mainly caused by missense mutations. VHL germline mutations may be rearrangements and large deletions (~20%) or point mutations (~80%), such as missense, frameshift, nonsense or in the splicing sites. VHL gene testing is considered standard for the clinical manegement of patients and relatives at risk, whereby it provides early diagnosis and treatment of tumors, improving their life expectancies. Molecular biology techniques such as sequencing and quantitative Southern blotting may detect virtually 100% of VHL germline mutations. More recent methods, such as quantitative real-time PCR and MLPA, have been shown to detect VHL gene gross deletions efficiently. The objectives of this study were: (1) to diagnose patients with VHL clinically; (2) to detect germline point mutations in the VHL gene in the patients and their close relatives at risk; (3) to provide pre and post-testing genetic counseling. Fourteen out of 37 patients from seven unrelated families fulfilled the VHL clinical diagnostic criteria, one patient presented a single cerebellar hemangioblastoma and seven at-risk relatives were still asymptomatic. The methods included: PCR, RFLP, genomic DNA direct sequencing and after cloning. Four germline point mutations in the coding region of the VHL gene were identified, two of whom had been described in literature [c.226_228delTTC (p.F76del), c.217C>T (p.Q73X)]. The other two mutations had not been described so far and affect the splicing sites (IVS1-1 G>A, IVS2-1 G>C). The other three families may carry gross germline deletions in the VHL gene. In conclusion, the outcome presented in this study provides with a greater knowledge of molecular basis of VHL disease and relies on the first post-graduation research carried out at the HCFMRP-USP cancer genetic counseling service.
18

Protéine-kinases et cancer du rein : Découverte et validation d’une nouvelle combinaison d’inhibiteurs ciblant les protéine-kinases ATM et CK2 / Protein kinases and renal carcinoma : discovery and validation of a novel combinational target therapy through co-inhibition of CK2 and ATM kinases

Giacosa, Sofia 14 October 2016 (has links)
L’incidence du cancer du rein et sa mortalité associée se sont accrues au cours des dernières années. Le type de cancer rénal le plus fréquent est celui nommé Cancer Rénal à Cellules Claires (CRCC) où le plus souvent, le gène suppresseur de tumeur Von Hippel Lindau (VHL) est inactivé. Malgré une détection plus précoce, l’évolution de la pathologie demeure incertaine, en particulier quand les patients développent des métastases ou acquièrent une résistance au traitement (25-30% des patients). De nouvelles thérapies ciblant des kinases (Sunitinib, Sorafenib ou Temsirolimus) bien que très prometteuses conduisent très souvent à l’acquisition de résistance. Dans ce contexte, il est urgent de développer de nouveaux modèles prédictifs de la réponse des patients aux traitements et d'identifier de nouvelles cibles thérapeutiques.Ma thèse de science visait trois objectifs complémentaires : 1) Identifier par criblage chimio-génomique des kinases comme cibles thérapeutiques combinées. 2) Etablir deux modèles de culture 3D de cancer du rein qui intègrent le microenvironnement d’une tumeur: les sphéroïdes et la culture organotypique de coupe de tissus. 3) Etudier la chimio-sensibilité de ces modèles à une combinaison de molécules identifiées dans le criblage.Un criblage cellulaire a été réalisé sur la plateforme de Criblage de Molécules BioActives (CEA- Grenoble). Il a consisté à tester 80 molécules inhibitrices de protéine-kinases en combinaison avec l’extinction génique par interférence ARN (shRNAs lentiviraux) de 36 cibles potentielles connues pour leur implication dans divers cancers. La lignée cellulaire choisie (786-O) est dérivée d’une tumeur rénale à cellules claires radio et chimio-résistante et dépourvue de VHL. Parmi les touches qui compromettent la viabilité des cellules 786-O, la combinaison choisie pour son efficacité cible deux kinases importantes dans le contrôle de la survie cellulaire et de la réparation de l’ADN CK2 et ATM. Le statut VHL des cellules module de façon dramatique leur sensibilité à cette combinaison, l’association de ces deux inhibiteurs étant plus efficace sur les cellules 786-O (VHL -) que sur les mêmes cellules dans lesquelles VHL a été réintroduit (VHL+). Au sein d’une tumeur, les différents niveaux d’oxygénation constituent une variation environnementale supplémentaire créant des susceptibilités ou des résistances aux traitements thérapeutiques. Pour déterminer l’impact de nos molécules dans ce contexte, nous avons testé la viabilité des cellules 786-O VHL+ et VHL- dans des conditions normoxiques (21% O2) ou hypoxiques (1,5% O2), en présence des molécules seules ou en combinaison. En normoxie, une diminution synergique de la viabilité des cellules 786-O VHL- est observée en présence de la combinaison, alors que cet effet n’a pas lieu sur les cellules 786-O VHL+. Cette synergie est potentialisée en condition hypoxique. Au niveau mécanistique, les voies de signalisation de stress cellulaires sont d’avantage activées dans les cellules VHL- en présence de la combinaison de molécules comparé au traitement avec chacune des molécules seules. Dans les sphéroïdes tumoraux multicellulaires reproduisant l’organisation d’une micro-tumeur, nos résultats montrent que notre combinaison de molécules induit d’avantage l’apoptose des cellules VHL- que les molécules seules, alors que les cellules VHL+ ne sont sensibles à aucun des traitements.Ces résultats montrent que l’action de nos molécules combinées est clairement plus efficace dans un modèle 3-D. Ils démontrent également qu’il est possible d’objectiver une pharmaco-modulation de la viabilité de cultures organotypiques de tumeur du rein par des combinaisons d’inhibiteurs chimiques de protéine-kinases. Les perspectives de ce travail sont la validation de cette combinaison sur des tumeurs humaines et l’exploitation des cultures organotypiques comme test personnalisé de réponse aux traitements. / Renal cell carcinoma accounts for 3% of all malignant diseases in adults making it the 10th most common cancer in France. The most frequent type of Kidney cancer is Clear Cell Renal Cell Carcinoma (CCRCC). Almost all CCRCC show an inactivation of the Von Hippel Lindau tumour suppressor gene (VHL). Between 25-30% of the patients will develop metastatic renal cell carcinoma (mRCC) by the time they are diagnose or become unresponsive to all treatments and in these cases, the disease has a rapid progression. Over the past years, kinase-targeted therapies (Sunitinib, Sorafenib, Temsirolimus) have become the mainstay of treatment for mRCC, however, most, if not all, patients acquire resistance to these approaches over time.In this context my PhD had 3 goals: a) to find a new combinatory targeted therapy through a High Throughput Screening; b) to establish 3D models mimicking the real environment of the tumours (spheroids, Tissue Slice Culture); c) to validate the Hits through different molecular and cellular biology studies.We conducted a synthetic lethal screen on the CMBA platform (CEA-Grenoble), choosing 36 potential genes targets and 80 kinases inhibitors drugs. Each of the target gene was silenced by a transduction with shRNA Lentivirus into the 786-O cell line derived from ccRCC that lacks the tumour suppressor VHL, is radio- and chemo-therapy resistant, has increased mobility and is highly metastatic. Among the hit combinations that affect cell viability, one of them was chosen because it targets two important kinases involved in cell survival and DNA repair: CK2 and ATM. Moreover, this combination is specifically more active in the 786-O VHL- cells than in 786-O VHL+ cell line. We evaluated the effect of our drugs on the viability of our 786-O VHL+ and VHL- cells in normoxic (21% O2) or hypoxic (1.5% O2) conditions that reflect different environments that are present in a tumour. Surprisingly, in normoxia, we found a synergetic effect of the drug mix only on the 786-O VHL- cells but not on 786-O VHL+ cells. Furthermore, this effect was even stronger in conditions of Hypoxia (up to 20% of synergism).Mechanistically, an up-regulation of the stress pathways was much stronger in the VHL- cells in the presence of the combination than with the drugs alone. No apoptosis was detected in this 2D models. In Multi-Cellular Tumour Spheroid (MCTS) where the organization of a micro-tumour is reproduced, our drugs are even more effective in inducing cell apoptosis than in 2D monolayers of 786-O VHL- cells. These results also demonstrate that pharmaco-modulation of viability of renal tumour organotypic culture by chemical combination targeting protein kinases can be studied. Perspectives of this work are the validation of this drug combination on human renal tumours and the use of organotypic culture as a test for personalized treatment response.
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Identificação e caracterização de mutações germinativas no gene VHL em famílias com a doença de von Hippel-Lindau / Identification and characterization of germline mutations in the VHL gene in families with von Hippel-Lindau disease

Israel Gomy 02 July 2008 (has links)
A doença de von Hippel-Lindau (VHL) é uma síndrome de câncer familial herdada de forma autossômica dominante que predispõe ao desenvolvimento de diversos tipos de neoplasias benignas e malignas. É causada por mutações germinativas e somáticas no gene VHL e tem uma incidência aproximada de um a cada 36.000 nascimentos. O gene VHL é um supressor tumoral e codifica a proteína VHL, a qual possui, entre outras funções, uma atividade ubiquitina-ligase, responsável pela poliubiquitinização e degradação proteassômica da subunidade alfa do fator induzido por hipóxia (HIF) na presença de oxigênio. As principais características da doença de VHL são: hemangioblastomas de sistema nervoso central (SNC), principalmente do cerebelo e medula espinhal; angiomas de retina e carcinoma renal de células claras. A probabilidade de desenvolver cada um desses tumores ao longo da vida é estimada em maior que 70%, podendo manifestar-se desde a infância até a fase adulta, principalmente entre a 2ª e 3ª décadas de vida. Classifica-se a doença de VHL conforme a ausência (tipo 1) ou presença de feocromocitoma (tipo 2). A doença do tipo 2 é causada, essencialmente, por mutações missense no gene VHL. As mutações podem ser grandes deleções (20%) ou pontuais (80%) do tipo missense, frameshift, nonsense ou em regiões de splicing. O teste genético é considerado padrão para o manejo clínico dos pacientes e dos familiares em risco, pois permite o diagnóstico e o tratamento precoce das neoplasias, melhorando assim a expectativa de vida. Técnicas de biologia molecular, como o seqüenciamento direto do DNA e o Southern blotting quantitativo, permitem a detecção de mutações germinativas em até 100% dos casos. Técnicas mais recentes, como o PCR quantitativo em tempo real e o MLPA, têm sido empregadas para uma detecção mais eficaz de grandes deleções no gene VHL. Os objetivos do presente estudo foram: (1) diagnosticar os pacientes com suspeita da doença de VHL; (2) identificar e caracterizar mutações germinativas pontuais no gene VHL nos pacientes e em seus parentes de 1º grau; (3) fornecer o aconselhamento genético pré e pós-teste. Dos 37 indivíduos com suspeita da doença de VHL, 14 pacientes de sete famílias diferentes preencheram os critérios diagnósticos. Um paciente apresentou hemangioblastoma cerebelar isolado e sete parentes de 1º grau estavam assintomáticos. Foram realizadas as técnicas de PCR, RFLP e seqüenciamento direto do DNA genômico e após clonagem. Foram identificadas quatro mutações pontuais na região codificadora do gene VHL em quatro famílias diferentes, sendo que duas delas haviam sido descritas na literatura [c.226_228delTTC (F76del), c.217C>T (Q73X)]. As outras duas mutações são descritas pela primeira vez neste estudo e afetam o sitio de splicing (IVS1-1 G>A, IVS2-1 G>C). É provável que as demais três famílias sejam portadoras de deleções germinativas no gene VHL. Em resumo, os resultados apresentados neste estudo ampliam o conhecimento da base molecular da doença de VHL e consiste na primeira pesquisa de pós-graduação produzida pelo ambulatório de aconselhamento genético do câncer do HCFMRP-USP. / Von Hippel-Lindau disease (VHL) is an autosomal dominant hereditary cancer syndrome that predisposes to the development of a variety of benign and malignant tumors. VHL is caused by germline and somatic mutations in the VHL gene and it has an incidence of approximately one in 36,000 livebirths. The VHL gene is a tumor suppressor that is translated into the VHL protein, which has many functions, mainly an ubiquitin-ligase activity, responsible for the polyubiquitylation and proteasomal degradation of the alpha subunit of the hipoxia-inducible factor (HIF) in the presence of oxygen. The main clinical features of VHL are: CNS hemangioblastomas, especially of the cerebellum and spinal cord; retinal angiomas and clear-cell renal carcinomas. The lifetime probability of developing one of these tumors is estimated at more than 70%, whichever may present since childhood until adulthood, more often during the 2nd and 3rd decades. VHL is classified into type 1 (without pheochromocytoma) and type 2 (with pheochromocytoma), the latter being mainly caused by missense mutations. VHL germline mutations may be rearrangements and large deletions (~20%) or point mutations (~80%), such as missense, frameshift, nonsense or in the splicing sites. VHL gene testing is considered standard for the clinical manegement of patients and relatives at risk, whereby it provides early diagnosis and treatment of tumors, improving their life expectancies. Molecular biology techniques such as sequencing and quantitative Southern blotting may detect virtually 100% of VHL germline mutations. More recent methods, such as quantitative real-time PCR and MLPA, have been shown to detect VHL gene gross deletions efficiently. The objectives of this study were: (1) to diagnose patients with VHL clinically; (2) to detect germline point mutations in the VHL gene in the patients and their close relatives at risk; (3) to provide pre and post-testing genetic counseling. Fourteen out of 37 patients from seven unrelated families fulfilled the VHL clinical diagnostic criteria, one patient presented a single cerebellar hemangioblastoma and seven at-risk relatives were still asymptomatic. The methods included: PCR, RFLP, genomic DNA direct sequencing and after cloning. Four germline point mutations in the coding region of the VHL gene were identified, two of whom had been described in literature [c.226_228delTTC (p.F76del), c.217C>T (p.Q73X)]. The other two mutations had not been described so far and affect the splicing sites (IVS1-1 G>A, IVS2-1 G>C). The other three families may carry gross germline deletions in the VHL gene. In conclusion, the outcome presented in this study provides with a greater knowledge of molecular basis of VHL disease and relies on the first post-graduation research carried out at the HCFMRP-USP cancer genetic counseling service.
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A Novel Role for Tid1 in HIF2α Regulation

Burnett, David 11 January 2010 (has links)
Activity of the hypoxia inducible HIF-alpha transcription factors drive the hypoxic response, resulting in enhancement of angiogenesis, tumour growth, invasion and metastasis. Seeking to uncover a role for Tid1 in control of HIF2-alpha, we used lentiviral shRNA to knock-down Tid1 in 786-0 RCC cells with and without pVHL. In 786-0 cells stably expressing pVHL30, Tid1 knock-down resulted in a dramatic reduction in HIF2-alpha levels relative to controls. Adenoviral-mediated overexpression of Tid1S rescued this decline in HIF2-alpha levels, while overexpression of Tid1L enhanced this decline. A protective role of Tid1S for HIF2-alpha was reproduced in a HEK293 cell model. Immunoprecipitations in HEK293 cells revealed a lack of direct binding between HIF2-alpha and Tid1 in vivo, while adenoviral-mediated overexpression of Tid1 in this model failed to alter in vitro binding between HIF2-alpha and pVHL30. We present a model in which Tid1 regulates HIF2-alpha stability through regulation of pVHL30 nuclear import.

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