Indiana University-Purdue University Indianapolis (IUPUI) / The innate and adaptive immune responses are critical for host survival. The TNFα/NF-κB signaling pathway is a major regulator of the immune response. The TNFα/NF-κB signaling pathway has also been proposed to play a role in the regulation of hematopoiesis. In the TNFα signaling pathway, full induction of NF-κB (specifically the p65 subunit) dependent transcription is regulated by a co-activator SIMPL. The biological significance of SIMPL in TNFα dependent responses is poorly understood. To study SIMPL in vitro and in vivo in mammalian cells, a knockdown system utilizing shRNA (short hairpin RNA) was used. Analysis of hematopoietic progenitor cells infected with a retrovirus encoding the SIMPL shRNA was used to study the role of SIMPL in hematopoiesis. The ability of progenitor cells lacking SIMPL to grow and differentiate was not compromised. In contrast in the progenitors cells lacking SIMPL, TNFα mediated inhibition of colony formation was significantly enhanced. These growth inhibitory effects of SIMPL were not due to an increase in apoptosis. The enhanced inhibitory affects were specific for TNFα and not found in other common hematopoietic inhibitors (TGF-β1 and IFNγ). Results of this work reveal that SIMPL is a component of the hematopoiesis that is required for TNFα dependent effects upon myeloid progenitors.

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The long-term evolution (LTE) network has been proposed to provide better network capacity than the earlier 3G network. Driven by the market, the conventional LTE (3G) network standard could not achieve the expectations of the international mobile telecommunications advanced (IMT-Advanced) standard. To satisfy this gap, the LTE-Advanced was introduced with additional network functionalities to meet up with the IMT-Advanced Standard. In addition, due to the need to minimize operational expenditure (OPEX) and reduce human interventions, the wireless cellular networks are required to be self-aware, self-reconfigurable, self-adaptive and smart. An example of such network involves transceiver base stations (BTSs) within a self-organizing network (SON). Besides these great breakthroughs, the conventional LTE and LTE-Advanced networks have not been designed with the intelligence of scalable capacity output especially in sudden demographic changes, namely during events of football, malls, worship centres or during religious and cultural festivals. Since most of these events cannot be predicted, modern cellular networks must be scalable in terms of capacity and coverage in such unpredictable demographic surge. Thus, the use of dynamic BTSs is proposed to be used in modern and future cellular networks for crowd and demographic change managements. Dynamic BTSs are complements of the capability of SONs to search, determine and deploy less crowded/idle BTSs to densely crowded cells for scalable capacity management. The mobile BTSs will discover areas of dark coverages and fill-up the gap in terms of providing cellular services. The proposed network relieves the LTE network from overloading thus reducing packet loss, delay and improves fair load sharing. In order to trail the best (least) path, a bio-inspired optimization algorithm based on swarm-particle optimization is proposed over the dynamic BTS network. It uses the ant-colony optimization algorithm (ACOA) to find the least path. A comparison between an optimized path and the un-optimized path showed huge gain in terms of delay, fair load sharing and the percentage of packet loss.

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Yes / In this paper we consider four restricted cases of the generalised communicating P systems and study their computational power, by providing improved results, with respect to the number of compartments involved. We illustrate the expressive power of these devices by modelling several problems, such as producer/consumer, work ow patterns, broadcasting problem and comparative operations. We also present some relationships between generalised communicating P systems and P colonies, tissue-like P systems with very simple components. / MG and FI were supported by a grant of the Romanian National Authority for Scientific Research, CNCS-UEFISCDI, project number PN-II-ID-PCE-2011-3-0688, CSVE by grant No. 120558 of the National Research, Development, and Innovation Office, Hungary.

Northern long-eared bat (Myotis septentrionalis) populations have declined sharply in recent years due to the introduction and rapid spread of White-nose Syndrome. This has prompted an urgent need for a greater understanding of their natural history in order to support the conservation of extant populations, particularly where forested day-roost and foraging habitats are being fragmented by development. Prior to 2006, with other Myotis species on the endangered species list, northern long-eared bats were understudied. In recent years, with the pressing concern to document the ecology of all cave bats affected by White-nose Syndrome on the landscape, researchers have now prioritized northern long-eared bat habitat needs, day-roost use, social dynamics, and barriers to gene flow. A relatively new discovery has been the numerous coastal populations that occur in smaller forest patches often surrounded by anthropogenic development. The goal of my research is to aid in informing future monitoring and management protocols that are specific to northern long-eared bats, particularly as they may shift from Threatened to Endangered under the Endangered Species Act. The chapters of this dissertation explore (1) similarities and differences between coastal and more documented upland habitat associations for populations of northern long-eared bats throughout the summer months through the use of acoustic detectors; (2) relationships between acoustic activity patterns and weather on an hourly basis for several bat species on Long Island, New York; and (3–4) day-roost characteristics and social network dynamics of a coastal northern long-eared bat maternity colony on Long Island, New York. I found that northern long-eared bat colonies have larger spatial footprints in – and a moderate tolerance for – forests in anthropogenically-developed areas than previously believed, though many natural history aspects of the bat were similar among coastal and interior populations. Installation of artificial day-roost structures such as bat boxes would likely be used and highly beneficial to colonies in these conditions, particularly to offset the deleterious effects of stochastic disturbance events on day-roost availability and to support social cohesion (and, by extension, reproductive success) for coastal maternity colonies. Additionally, I found that acoustic activity increased in riparian areas, or at sites closer to water features, and as proportion of forest coverage increased at a broad scale. However, immediately around the detector this relationship was reversed. Taken together, this demonstrates that riparian corridors, water features, and forest structural heterogeneity should explicitly be included in management guidelines. / Doctor of Philosophy / White-nose Syndrome is a fungal disease that has killed millions of cave bats in North America, including the northern long-eared bat (Myotis septentrionalis) that during the spring through fall uses forests for roosting and foraging habitat. As the disease continues to spread, and as forests are increasingly being lost to urbanization, it is imperative for researchers and land managers to understand the landscape needs of this species so that they can retain those forests that are used by this species. In addition to broader landscape needs, it is important to understand what specific forest stand to tree features the bats are using, how their social dynamics support their reproductive success, and how to best support habitat conditions foster mating in the fall swarm to avoid inbreeding. In recent years, more northern long-eared bats have been documented in coastal landscapes, suggesting that these areas might be more important to the conservation of the species than previously believed. In this dissertation, my aim was to explore how or why the landscapes in these coastal areas were being used by these bats both during nightly foraging and during the day as resting areas (day-roosts). Additionally, I explored how multiple species of bats were responding to weather conditions on the coast across seasons. Overall, I found that complex forests continue to be an important resource for northern long-eared bats, as well as water features whereby the latter should be more explicitly included in conservation management plans. Northern long-eared bats also show an ability to successfully use small forest patches within a larger urbanized landscape, including using human structures for day-roosts. Human structures might provide reliable, multi-year day-roosts in areas where extreme coastal weather events (hurricanes) occur or increase or as natural processes reduce the suitability of these forests to provide day-roosts. These structures, particularly artificial roost boxes could also support the social network of reproductive northern long-eared bats and thus maintain population stability to some extent.

Day-roost use by northern long-eared bat (Myotis septentrionalis) maternity colonies on the Fort Knox military reservation, Kentucky, USA, resulted in formation of non-random networks of roosts that exhibited a trend toward centralization. Centralization of day-roost networks was reflected in the social structure of colonies, which were characterized by dense associations among individuals within colonies. Social structure varied among colonies and appeared to be related to reproductive condition; colonies exhibited greater cohesiveness during parturition and lactation. Northern long-eared bat maternity colonies appeared to be exclusive, occupying distinct roosting areas with one or several areas receiving intense use. Day-roost removal simulations suggested a linear relationship between colony fragmentation and roost loss, and that loss of >20% of roosts is required to initiate colony fragmentation. Experimental hierarchical removal of day-roosts yielded results consistent with simulations, as removal of the single most-central (primary) roost had no impact on colony fragmentation, whereas removal of 24% of less-central (secondary) roosts resulted in partial network fragmentation. Patterns of colony day-roost and space use were similar pre- and post-removal treatments. Day-roost removal did not alter the number of roosts used by individual bats, but distances moved between roosts were greater in the secondary roost-removal treatment group. Day-roost characteristics largely were consistent pre-post treatment for both treatment groups. Historical data from an Indiana bat (Myotis sodalis) maternity colony revealed that this species also exhibits a non-random social assorting dynamic. Non-random social assortment resulted in a closely connected centralized network of day-roosts. Individuals within the Indiana bat maternity colony exhibited close social connections with colony members, but subgroups likely existed within the colony. Indiana bat day-roosting ecology appears flexible, as patterns of roost and space use differed substantially between years. Development of specific, but tactical, management approaches for individual colonies of both northern long-eared and Indiana bats may be possible. Such approaches would allow land managers to manage for both northern long-eared bat habitat and other objectives. However, the nature of targeted management approaches employed likely will depend on the unique forest context and dynamic within which individual colonies reside. / Ph. D.

Department of History / M.A. (History)