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Genus one partitionsYip, Martha January 2006 (has links)
We obtain a tight upper bound for the genus of a partition, and calculate the number of partitions of maximal genus. The generating series for genus zero and genus one rooted hypermonopoles is obtained in closed form by specializing the genus series for hypermaps. We discuss the connection between partitions and rooted hypermonopoles, and suggest how a generating series for genus one partitions may be obtained via the generating series for genus one rooted hypermonopoles. An involution on the poset of genus one partitions is constructed from the associated hypermonopole diagrams, showing that the poset is rank-symmetric. Also, a symmetric chain decomposition is constructed for the poset of genus one partitions, which consequently shows that it is strongly Sperner.
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Implementation and evaluation of a text extraction tool for adverse drug reaction informationDahlberg, Gunnar January 2010 (has links)
Inom ramen för Världshälsoorganisationens (WHO:s) internationella biverkningsprogram rapporterar sjukvårdspersonal och patienter misstänkta läkemedelsbiverkningar i form av spontana biverkningsrapporter som via nationella myndigheter skickas till Uppsala Monitoring Centre (UMC). Hos UMC lagras rapporterna i VigiBase, WHO:s biverkningsdatabas. Rapporterna i VigiBase analyseras med hjälp av statistiska metoder för att hitta potentiella samband mellan läkemedel och biverkningar. Funna samband utvärderas i flera steg där ett tidigt steg i utvärderingen är att studera den medicinska litteraturen för att se om sambandet redan är känt sedan tidigare (tidigare kända samband filtreras bort från fortsatt analys). Att manuellt leta efter samband mellan ett visst läkemedel och en viss biverkan är tidskrävande. I den här studien har vi utvecklat ett verktyg för att automatiskt leta efter medicinska biverkningstermer i medicinsk litteratur och spara funna samband i ett strukturerat format. I verktyget har vi implementerat och integrerat funktionalitet för att söka efter medicinska biverkningar på olika sätt (utnyttja synonymer,ta bort ändelser på ord, ta bort ord som saknar betydelse, godtycklig ordföljd och stavfel). Verktygets prestanda har utvärderats på manuellt extraherade medicinska termer från SPC-texter (texter från läkemedels bipacksedlar) och på biverkningstexter från Martindale (medicinsk referenslitteratur för information om läkemedel och substanser) där WHO-ART- och MedDRA-terminologierna har använts som källa för biverkningstermer. Studien visar att sofistikerad textextraktion avsevärt kan förbättra identifieringen av biverkningstermer i biverkningstexter jämfört med en ordagrann extraktion. / Background: Initial review of potential safety issues related to the use of medicines involves reading and searching existing medical literature sources for known associations of drug and adverse drug reactions (ADRs), so that they can be excluded from further analysis. The task is labor demanding and time consuming. Objective: To develop a text extraction tool to automatically identify ADR information from medical adverse effects texts. Evaluate the performance of the tool’s underlying text extraction algorithm and identify what parts of the algorithm contributed to the performance. Method: A text extraction tool was implemented on the .NET platform with functionality for preprocessing text (removal of stop words, Porter stemming and use of synonyms) and matching medical terms using permutations of words and spelling variations (Soundex, Levenshtein distance and Longest common subsequence distance). Its performance was evaluated on both manually extracted medical terms (semi-structuredtexts) from summary of product characteristics (SPC) texts and unstructured adverse effects texts from Martindale (i.e. a medical reference for information about drugs andmedicines) using the WHO-ART and MedDRA medical term dictionaries. Results: For the SPC data set, a verbatim match identified 72% of the SPC terms. The text extraction tool correctly matched 87% of the SPC terms while producing one false positive match using removal of stop words, Porter stemming, synonyms and permutations. The use of the full MedDRA hierarchy contributed the most to performance. Sophisticated text algorithms together contributed roughly equally to the performance. Phonetic codes (i.e. Soundex) is evidently inferior to string distance measures (i.e. Levenshtein distance and Longest common subsequence distance) for fuzzy matching in our implementation. The string distance measures increased the number of matched SPC terms, but at the expense of generating false positive matches. Results from Martindaleshow that 90% of the identified medical terms were correct. The majority of false positive matches were caused by extracting medical terms not describing ADRs. Conclusion: Sophisticated text extraction can considerably improve the identification of ADR information from adverse effects texts compared to a verbatim extraction.
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Transitive Factorizations of Permutations and Eulerian Maps in the PlaneSerrano, Luis January 2005 (has links)
The problem of counting ramified covers of a Riemann surface up to homeomorphism was proposed by Hurwitz in the late 1800's. This problem translates combinatorially into factoring a permutation with a specified cycle type, with certain conditions on the cycle types of the factors, such as minimality and transitivity.
Goulden and Jackson have given a proof for the number of minimal, transitive factorizations of a permutation into transpositions. This proof involves a partial differential equation for the generating series, called the Join-Cut equation. Furthermore, this argument is generalized to surfaces of higher genus. Recently, Bousquet-Mélou and Schaeffer have found the number of minimal, transitive factorizations of a permutation into arbitrary unspecified factors. This was proved by a purely combinatorial argument, based on a direct bijection between factorizations and certain objects called <em>m</em>-Eulerian trees.
In this thesis, we will give a new proof of the result by Bousquet-Mélou and Schaeffer, introducing a simple partial differential equation. We apply algebraic methods based on Lagrange's theorem, and combinatorial methods based on a new use of Bousquet-Mélou and Schaeffer's <em>m</em>-Eulerian trees. Some partial results are also given for a refinement of this problem, in which the number of cycles in each factor is specified. This involves Lagrange's theorem in many variables.
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Genus one partitionsYip, Martha January 2006 (has links)
We obtain a tight upper bound for the genus of a partition, and calculate the number of partitions of maximal genus. The generating series for genus zero and genus one rooted hypermonopoles is obtained in closed form by specializing the genus series for hypermaps. We discuss the connection between partitions and rooted hypermonopoles, and suggest how a generating series for genus one partitions may be obtained via the generating series for genus one rooted hypermonopoles. An involution on the poset of genus one partitions is constructed from the associated hypermonopole diagrams, showing that the poset is rank-symmetric. Also, a symmetric chain decomposition is constructed for the poset of genus one partitions, which consequently shows that it is strongly Sperner.
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A New Approach To Generation Of Non-permutation Schedules For Flowshops With Missing OperationsTabalu, Metin 01 January 2007 (has links) (PDF)
In this study, non-permutation flowshops with missing operations are considered. The primary performance criterion is the total cycle time (i.e. makespan) and the secondary criterion is the total flowtime. In order to obtain the schedule with minimum makespan and minimum total flowtime, non-permutation schedules are being generated instead of permutation ones by permitting multiple jobs bypassing stages where misisng operations occur. A heuristic algorithm has been developed in order to generate non-permutations sequences through those stages. The heuristic algorithm has been compared with the existing heuristic methods in the literature, the ones generating permutation vs. the ones generating non-permutation schedules. Computational analysis is conducted to investigate the effects of certain parameter values such as the number of machines, the number of jobs and the percentage of missing operations. The results demonstrate slight improvement in the makespan as well as a significant improvement in total flowtime of schedules generated by the new heuristic procedure compared to leading non-permutation and permutation schedule generating heuristics, where the percentage of improvement gets higher with larger percentage of missing operations.
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Design And Systemc Implementation Of A Crypto Processor For Aes And Des AlgorithmsEgemen, Tufan 01 December 2007 (has links) (PDF)
This thesis study presents design and SystemC implementation of a Crypto Processor
for Advanced Encryption Standard (AES), Data Encryption Standard (DES) and
Triple DES (TDES) algorithms. All of the algorithms are implemented in single
architecture instead of using separate architectures for each of the algorithm. There is
an Instruction Set Architecture (ISA) implemented for this Crypto Processor and the
encryption and decryption of algorithms can be performed by using the proper
instructions in the ISA.
A permutation module is added to perform bit permutation operations, in addition to
some basic structures of general purpose micro processors. Also the Arithmetic
Logic Unit (ALU) structure is modified to process some crypto algorithm-specific
operations.
The design of the proposed architecture is studied using SystemC. The architecture is
implemented in modules by using the advantages of SystemC in modular structures.
The simulation results from SystemC are analyzed to verify the proposed design. The
instruction sets to implement the crypto algorithms are presented and a detailed
hardware synthesis study has been carried out using the tool called SystemCrafter.
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Circuit Design of Fast Fourier Transform for DVB-H SystemsTseng, Wei-Chen 05 March 2009 (has links)
A circuit design of Fast Fourier Transform for DVB-H system is presented in this thesis. This circuit is based on SDF (single path delay feedback) pipeline architecture with radix-2 computation element. We propose a novel method of timing scheduling that can share one complex multiplier for couple of stage and promote the utilization of complex multiplier to 100%, so we can improve the implementation with radix-2 computation. The number of bits is carefully selected by system simulation to meetthe requirements of DVB-H system. In addition, a memory table permutation deletion method for memory scheduling, which can reduce the size of memory storing twiddle factors tables.
The circuit is carried out by CMOS 0.18£gm 1P6M process with core area 2.08 x 2.076 mm2. In the gate level simulation, the output data rate of this circuit is above 50MHz, so the circuit can meet the requirement of DVB-H system.
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Analyse comparative des tests de permutations en régression multiple et application à l'analyse de tableaux de distances.Shadrokh, Ali 20 July 2007 (has links) (PDF)
Lorsque le processus de génération des données ne respecte pas certains des postulats fondant l'analyse statistique du modèle classique de régression linéaire, les tests de permutations offrent une alternative non paramétrique fiable de construction de tests d'hypothèse libres. La première application de cette méthode d'inférence statistique au modèle de régression linéaire simple renvoie à Fisher (1935) et Pitman (1937a,b,1938). Cette méthode de ré-échantillonnage est fondée sur des postulats moins forts que la méthode paramétrique classique et facilement vérifiables en pratique : l'échangeabilité des observations sous l'hypothèse nulle. Si l'utilisation des tests de permutation fait consensus en régression linéaire simple et pour tester l'adéquation d'un modèle en régression multiple, le problème se complique lorsqu'on souhaite mettre à l'épreuve une hypothèse de nullité d'un coefficient de régression partielle. L'étude des conditions d'échangeabilité n'est plus simple dans ce cas. Il n'est alors plus possible de construire des tests exacts plusieurs propositions de tests sont en concurrence. <br />L'objectif principal de notre travail est la comparaison des tests de permutation adaptés aux hypothèses de nullité d'un coefficient de régression partielle dans un modèle linéaire à p variables explicatives, conditionnellement à l'observation d'un échantillon. Quatre méthodes sont comparées, d'une part en recourant à des simulations effectuées dans le cas d'une régression double, puis théoriquement, afin de déterminer les propriétés de biais, de couverture et de puissance de ces tests. Les résultats obtenus sont ensuite étendus au cas de la régression linéaire multiple.<br />Un dernier chapitre complète cette étude en traitant le problème de test de la dépendance partielle entre tableaux de distances interpoints. Nous avons comparé les adaptations des quatre méthodes de test de permutation à ce contexte marqué par la dépendance existant entre éléments d'une matrice de distance et nous avons obtenu dans ce cas des résultats tout à fait différents de ceux qui caractérisent.
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A Study of Permutation Polynomials over Finite FieldsFernando, Neranga 01 January 2013 (has links)
Let p be a prime and q = pk. The polynomial gn,q isin Fp[x] defined by the functional equation Sigmaa isin Fq (x+a)n = gn,q(xq- x) gives rise to many permutation polynomials over finite fields. We are interested in triples (n,e;q) for which gn,q is a permutation polynomial of Fqe. In Chapters 2, 3, and 4 of this dissertation, we present many new families of permutation polynomials in the form of gn,q. The permutation behavior of gn,q is becoming increasingly more interesting and challenging. As we further explore the permutation behavior of gn,q, there is a clear indication that gn,q is a plenteous source of permutation polynomials.
We also describe a piecewise construction of permutation polynomials over a finite field Fq which uses a subgroup of Fq*, a “selection” function, and several “case” functions. Chapter 5 of this dissertation is devoted to this piecewise construction which generalizes several recently discovered families of permutation polynomials.
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Multivariate permutation tests for the k-sample problem with clustered dataRahnenführer, Jörg January 1999 (has links) (PDF)
The present paper deals with the choice of clustering algorithms before treating a k-sample problem. We investigate multivariate data sets that are quantized by algorithms that define partitions by maximal support planes (MSP) of a convex function. These algorithms belong to a wide class containing as special cases both the well known k-means algorithm and the Kohonen (1985) algorithm and have been profoundly investigated by Pötzelberger and Strasser (1999). For computing the test statistics for the k-sample problem we replace the data points by their conditional expections with respect to the MSP-partition. We present Monte Carlo simulations of power functions of different tests for the k-sample problem whereas the tests are carried out as multivariate permutation tests to ensure that they hold the level. The results presented show that there seems to be a vital and decisive connection between the optimal choice of the clustering algorithm and the tails of the probability distribution of the data. Especially for distributions with heavy tails like the exponential distribution the performance of tests based on a quadratic convex function with k-means type partitions totally breaks down. (author's abstract) / Series: Report Series SFB "Adaptive Information Systems and Modelling in Economics and Management Science"
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