Sexual conflict is broadly defined as a conflict between the evolutionary interests of the two sexes. Depending on the genetic architecture of the traits involved, it can occur at the level of male-female interactions or take the form of selection acting to change the mean of a shared trait against the sign of its genetic correlation. The aim of my thesis was to use genome-wide expression profiles in the model organism Drosophila melanogaster to provide novel insights in the study of sexual conflict. First, we studied the female post-mating response to partition transcriptional changes associated with reproduction from male-induced effects, which are known to be harmful to females. We found substantial changes in expression of metabolic pathways associated with the activation of reproduction, while male-specific effects were dominated by the onset of an immune response. Changes in female response under different mating strategies was studied using experimental evolution: we found that monogamous females suffered decreased fecundity and their gene expression profiles suggested an overall weaker response to mating. To identify sexually antagonistic genes, we used hemiclonal lines and associated their sex-specific fitness with genome-wide transcript abundance. We confirmed the presence of a negative covariance for fitness and identified a group of candidate genes experiencing sexually antagonistic selection. We then focused on mitochondria, which can enable the accumulation of deleterious mutations with sex-specific effects due to their maternal inheritance, and found few effects on nuclear gene expression in females but major effects in males, predominantly in male-specific tissues. Finally, we used published data to compare intraspecific and interspecific genetic variation for a set of transcripts, to test whether speciation occurs along lines of maximum genetic variance. In conclusion, gene expression techniques can generate useful results in the study of sexual conflict, particularly in association with phenotypic data or when integrated with published datasets.

Diss. (sammanfattning) Uppsala : Uppsala universitet, 2006. / Härtill 5 uppsatser.

Diss. (sammanfattning) Uppsala : Uppsala universitet, 2006. / Härtill 5 uppsatser.

Thesis (M.S.) -- University of Montana, 2008. / Title from author supplied metadata. Description based on contents viewed on July 6, 2009. Includes bibliographical references.

Thesis (M.Sc.)--Memorial University of Newfoundland, 2003. / Includes bibliographical references. Also available online.

Thesis (M.A.)--State University of New York at New Paltz, 2007. / Also issued in electronic version. Includes bibliographical references (leaves 64-74). Online version available via the SUNY New Paltz Sojourner Truth Library : http://hdl.handle.net/1951/42568

abstract: Conditions during development can shape the expression of traits at adulthood, a phenomenon called developmental plasticity. In this context, factors such as nutrition or health state during development can affect current and subsequent physiology, body size, brain structure, ornamentation, and behavior. However, many of the links between developmental and adult phenotype are poorly understood. I performed a series of experiments using a common molecular currency - carotenoid pigments - to track somatic and reproductive investments through development and into adulthood. Carotenoids are red, orange, or yellow pigments that: (a) animals must acquire from their diets, (b) can be physiologically beneficial, acting as antioxidants or immunostimulants, and (c) color the sexually attractive features (e.g., feathers, scales) of many animals. I studied how carotenoid nutrition and immune challenges during ontogeny impacted ornamental coloration and immune function of adult male mallard ducks (Anas platyrhynchos). Male mallards use carotenoids to pigment their yellow beak, and males with more beaks that are more yellow are preferred as mates, have increased immune function, and have higher quality sperm. In my dissertation work, I established a natural context for the role that carotenoids and body condition play in the formation of the adult phenotype and examined how early-life experiences, including immune challenges and dietary access to carotenoids, affect adult immune function and ornamental coloration. Evidence from mallard ducklings in the field showed that variation in circulating carotenoid levels at hatch are likely driven by maternal allocation of carotenoids, but that carotenoid physiology shifts during the subsequent few weeks to reflect individual foraging habits. In the lab, adult beak color expression and immune function were more tightly correlated with body condition during growth than body condition during subsequent stages of development or adulthood. Immune challenges during development affected adult immune function and interacted with carotenoid physiology during adulthood, but did not affect adult beak coloration. Dietary access to carotenoids during development, but not adulthood, also affected adult immune function. Taken together, these results highlight the importance of the developmental stage in shaping certain survival-related traits (i.e., immune function), and lead to further questions regarding the development of ornamental traits. / Dissertation/Thesis / Ph.D. Biology 2012

abstract: Differences between males and females can evolve through a variety of mechanisms, including sexual and ecological selection. Because coloration is evolutionarily labile, sexually dichromatic species are good models for understanding the evolution of sex differences. While many jumping spiders exhibit diverse and brilliant coloration, they have been notably absent from such studies. In the genus Habronattus, females are drab and cryptic while males are brilliantly colored, displaying some of these colors to females during elaborate courtship dances. Here I test multiple hypotheses for the control and function of male color. In the field, I found that Habronattus males indiscriminately court any female they encounter (including other species), so I first examined the role that colors play in species recognition. I manipulated male colors in H. pyrrithrix and found that while they are not required for species recognition, the presence of red facial coloration improves courtship success, but only if males are courting in the sun. Because light environment affects transmission of color signals, the multi-colored displays of males may facilitate communication in variable and unpredictable environments. Because these colors can be costly to produce and maintain, they also have the potential to signal reliable information about male quality to potential female mates. I found that both red facial and green leg coloration is condition dependent in H. pyrrithrix and thus has the potential to signal quality. Yet, surprisingly, this variation in male color does not appear to be important to females. Males of many Habronattus species also exhibit conspicuous markings on the dorsal surface of their abdomens that are not present in females and are oriented away from females during courtship. In the field, I found that these markings are paired with increased leg-waving behavior in a way that resembles the pattern and behavior of wasps; this may provide protection by exploiting the aversions of predators. My data also suggest that different activity levels between the sexes have placed different selection pressures on their dorsal color patterns. Overall, these findings challenge some of the traditional ways that we think about color signaling and provide novel insights into the evolution of animal coloration. / Dissertation/Thesis / Ph.D. Biology 2012

A full understanding of any biological trait requires investigation of its evolutionary origin. Primates inspire great curiosity amongst researchers due to the remarkable diversity across species in both anatomical and behavioural traits, including sociality, sexual behaviour, life histories, neuro-anatomy, cognitive abilities and behavioural repertoires. The study of primates has involved comparative approaches since its inception, however, the necessary tools for statistically investigating the macro-evolutionary processes responsible for current diversity in biological traits have been developed only in the last 30 years or so, namely phylogenetic reconstruction and phylogenetic comparative methods. Amongst a multitude of evolutionary questions that can be addressed by phylogenetic comparative analyses, this thesis attempts to address two in particular, concerning primates. First, chapters 3 and 4 use meta-analysis and phylogenetic comparative analyses to investigate the evolution of large, brightly coloured ‘exaggerated sexual swellings' in female Catarrhine (‘Old World') primates. Together, chapters 3 and 4 show that such swellings are signals of temporal fertility, and present evidence to suggest that swellings co-evolved with conditions favouring male mate choice and cryptic female choice, therefore shedding light on the general conditions under which female signals of temporal fertility should evolve. Second, chapters 5 and 6 use phylogenetic comparative analyses investigate the evolution of enlarged brain size in the primate order. Together, chapters 5 and 6 suggest that multiple selection pressures have contributed to diversity in brain size and cognitive traits across primates, including sociality, intra-sexual competition and extended life history. Further, analyses presented in chapter 6 suggest that reliance on learned behaviour is a self-reinforcing evolutionary process, favouring ‘runaway' increases in cognitive abilities and reliance on culture in some primate lineages, which parallels increases in brain size, cognitive ability and reliance on culture in human evolution.

Meliponiculture (or stingless beekeeping) is a powerful tool for sustainable economic development in the tropics. However, meliponiculture has many challenges as it lacks standardization in management and breeding practices. The aim of this thesis was to investigate stingless bee reproductive biology combined to management and breeding as background to meliponiculture improvement. In chapter 1, we performed a meta-analysis of heritability across the Hymenoptera in order to review current knowledge and discuss the challenges for bee breeding and conservation. In chapter 2, we assessed how sexual selection acts on male traits in the stingless bee Scaptotrigona aff. depilis and identified which traits may affect male fitness. In chapter 3, we estimated heritability and genetic correlations for the traits studied in the previous chapter, to understand how evolution shapes male traits and to identify important traits for breeding programs. Finally, in chapter 4 we investigated how the environment and long-term management influence colony productivity in Melipona subnitida (jandaíra), a commercially managed species in Northeastern Brazil. Our results revealed that morphological traits exhibit higher heritability estimates than fitness related traits, and in general, colony productivity traits showed potential for breeding. However, few studies are available for stingless bees yet. Male aggregations in S. aff depilis selected competitive males with higher quality sperm, indicating the importance of this mechanism in stingless bee mating biology. The studied male traits exhibited high heritability estimates, with exception of sperm length. Since aggregations selected males with shorter sperm, these results suggest selection for long-term sperm storage by queens and higher fertilization potential. The assessment of M. subnitida records revealed that honey production was affected by climate and management, and strategies to improve beekeeping practices were discussed. We believe this thesis provides important guidelines to establish successful stingless bee breeding programs / A meliponicultura, criação racional de abelhas sem ferrão, é uma poderosa ferramenta para o desenvolvimento econômico sustentável em regiões tropicais. No entanto, a prática da meliponicultura enfrenta diversos desafios, como a falta de padronização das técnicas de manejo e melhoramento genético. O objetivo desta tese foi investigar a biologia reprodutiva de abelhas sem ferrão aliada ao manejo e ao melhoramento genético, a fim de fornecer subsídios para o aprimoramento da meliponicultura. No capítulo 1, realizamos uma meta-análise sobre herdabilidade em Hymenoptera, a fim de compreender o conhecimento atual e os desafios associados ao melhoramento genético de abelhas e sua conservação. No capítulo 2, avaliamos como a seleção sexual atua em caracteres dos machos da espécie Scaptotrigona aff. depilis e identificamos quais caracteres podem influenciar o sucesso reprodutivo. No capítulo 3, estimamos a herdabilidade e correlações genéticas para os caracteres avaliados no capítulo anterior, a fim de entender como a evolução atua moldando os caracteres dos machos e quais desses caracteres podem ser utilizados em programas de melhoramento genético. Finalmente, no capítulo 4, investigamos o efeito do ambiente e do manejo na produtividade de colônias em Melipona subnitida (jandaíra), uma espécie manejada comercialmente no Nordeste brasileiro. Nossos resultados revelaram que caracteres morfológicos exibem estimativas de herdabilidade mais altas do que caracteres ligados ao sucesso reprodutivo. No entanto, poucos estudos com abelhas sem ferrão foram realizados até o momento. Agregações de machos em S. aff. depilis selecionaram machos mais competitivos que apresentaram maior qualidade espermática, indicando a importância desse mecanismo na biologia reprodutiva de abelhas sem ferrão. Os caracteres estudados apresentaram alta herdabilidade, com exceção do comprimento do espermatozoide. Como agregações selecionam machos com espermatozoides mais curtos, esses resultados sugerem seleção direcionada para um maior tempo de armazenamento do esperma pelas rainhas e maior potencial de fertilização. A avaliação dos registros de M. subnitida revelou que a produção de mel foi afetada pelo clima e pelo manejo, e estratégias a fim de melhorar as práticas da meliponicultura foram discutidas. Acreditamos que essa tese fornece importantes resultados para o estabelecimento de programas de melhoramento genético em abelhas sem ferrão