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<p dir="ltr">My research projects focuses on the dual targeting of small molecules to abrogate aberrant α-syn, tau (2N4R), and p-tau (1N4R) aggregation and to reduce the spread of AD and related dementias. Not very many drug discovery programs focus on the specific isoforms of the tau protein. We established two series of compounds: aminoindole compounds connected by a carboxamide and triazine compounds connected by a triazine linker. Using biophysical methods we evaluated the effectiveness of both series of compounds in decreasing the amount of misfolded α-syn and tau protein in order to explore their anti-aggregation potential.</p><p><br></p>

Ein Ansatz der Darstellung von neuartigen funktionalen Materialien basiert auf der Synthese von Foldameren mit charakteristischen Eigenschaften, die eine Kontrolle über Formgebung und Gestaltung der Makromoleküle und derer Aggregate zulassen. Bislang sind gerade größere Foldamerstrukturen definierter Größe und Form meist schwer darstellbar und eine strukturelle Modifizierbarkeit nicht ohne weiteres möglich. In dieser Arbeit konnte gezeigt werden, dass die hohe Effizienz der seit 2002 bekannten Kupfer(I)-katalysierten 1,3-dipolaren Azid-Alkin-Cycloaddition, kurz “Klick“-Reaktion genannt, verwendet werden kann, um neuartige heteroaromatische Gerüste für die Konstruktion von diversen (makromolekularen) Strukturen zu generieren. Hierbei wird der bei der Reaktion entstehende Triazol-Ring gezielt als funktionale und strukturgebende Einheit genutzt. Zunächst wurden auf einfache und hochmodulare Weise 2,6-Bis(1-aryl-1,2,3-triazol-4-yl)pyridine (BTPs) dargestellt, die in einer hufeisenförmigen, planaren Konformation vorliegen und sich daher als helikogene Einheiten für die Konstruktion von helikalen aromatischen Foldameren eignen. Zudem stellen die BTP-Strukturen eine neue Klasse von pyridinzentrierten, tridentaten Liganden dar. Sie koordinieren an eine Vielzahl von Übergangsmetallionen unter Ausbildung von Metallkomplexen, die über interessante magnetische und lumineszierende Eigenschaften verfügen. Durch die Koordination, aber auch bei Protonierung, lassen sich die BTP-Gerüste von der gebeugten anti-anti-Konformation in eine gestreckte syn-syn-Konformation schalten. Dies wurde in Lösung, im kristallinen Festkörper und an der Flüssig-Fest-Grenzfläche zu Graphit untersucht. Über Selbstorganisation großflächig ausgebildete hochgeordnete BTP-Monoschichten an der Graphitoberfläche lassen sich mit Hilfe der Rastertunnel-Mikroskopie visualisieren und durch oben genannte externe Stimuli umstrukturieren. Eine neue Klasse von (BTP-basierten) responsiven heteroaromatischen oligomeren und polymeren Foldameren wurde mit Hilfe der „Klick“-Reaktion generiert. Die Oligomeren, sogenannte ”Klickamere“, mit einer Länge von 17 aromatischen Ringen zeigen in polaren Lösungsmitteln ein ausgeprägtes helikales Faltungsverhalten. Ein aus 17 aromatischen Ringen bestehender Foldamerstrang ist gegenüber Chloridionen responsiv, wobei es durch die Wechselwirkung mit diesem achiralen Stimulus bemerkenswerter Weise zu einer Helixinversion kommt. Die entsprechenden responsiven Polymere falten in eine stabile helikale Konformation, die bei Zugabe von Metallionen aufbricht und zu der Bildung von koordinativ kreuzverlinkten, stark viskosen Gelen führt. / One approach to develop novel functional materials is based on the synthesis of macromolecules with characteristic properties, in particular foldamers. However, preparation and structural variation of macromolecules of controllable size and specific shape are often cumbersome and versatile synthetic routes are still needed. In this dissertation, the high efficiency of the so called “click”-reaction, i.e. the Cu(I)-catalyzed Huisgen-type 1,3-dipolar cycloaddition, has been used to design a novel class of heteroaromatic (macromolecular) scaffolds. In these structures the formed triazole moieties constitute an essential integral part rather than a mere connecting unit. In a first step, structurally varying 2,6-Bis(1-aryl-1,2,3-triazolyl-4-yl)pyridines (BTPs) have been generated in an easy and modular way. The BTP scaffold adopts a kinked conformation and therefore functions as helicogenic building block for the construction of helical foldamers. Additionally, the BTP framework is responsive towards protonation and transition metal ion complexation, thereby undergoing a significant structural change from the kinked anti-anti into the extended syn-syn conformation. The conformational switching has been investigated in solution and in the solid state but can also be visualized at the liquid-solid interface on graphite by STM imaging. The BTPs represent a novel class of pyridine-centered, tridentate ligands, which form complexes with interesting magnetic and luminescent properties by the coordination to numerous transition metal ions. Varying heteroaromatic oligomeric and polymeric foldamers with remarkable properties have been generated using the “click”-reaction as synthesis tool. The BTP building blocks, which have (partly) been integrated into the backbones, support the stability of the helical conformation and provide responsiveness towards external stimuli. Three oligomer series of different length have been synthesized and analyzed. Oligomers consisting of 17 aromatic rings, termed clickamers, fold into a helical conformation in polar solvents. One of the three clickamers shows an unexpected phenomenon of helix inversion upon interaction with chloride ions as an achiral stimulus. The corresponding polymeric strands fold into an even more stable helical conformation, which breaks up upon exposure to transition metal ions leading to coordinatively crosslinked, highly viscous gels.

Double perovskite materials exhibit alterations in magnetic order through manipulation oftheir crystal structure. Certain ultra thin metallic bilayers can create an exotic magnetic stateof confined spin textures called skyrmions. In both cases, new atomic arrangements leadto new electrical and magnetic properties. The following work comprises two studies, bothof which examine the magnetic properties of transition metals in either powder or thin filmsamples. The first part is dedicated to a series of muon spin rotation and relaxation (muSR)experiments on a LaSrNiReO6, double perovskite, powder sample. In the muSR technique, aspin polarized muon beam is focused onto a powder envelope in low pressure and temperatureconditions. The spins of the implanted muons evolve depending on the intrinsic or externallyapplied magnetic field according to Larmor precession. The measurement is based onthe detection of decay positrons that carry this precession information on their preferreddecay directions. Measurements that were realized in wTF, ZF and LF setups, reveal asecond transition to magnetic order at Tc ≃ 22K, below a transition that was observed at T =261K from magnetic susceptibility measurements. The experimental results point to threemagnetic phases, paramagnetic for T &gt; 261K, dilute ferrimagnetic for 22 &lt; T &lt; 261K and amagnetically ordered state for T &lt; 22K, that may implicate ferro- and antiferromagnetismfrom Ni sublattices and Ni-Re interactions. The second part follows an attempt to produce and characterize ultra thin bilayer filmsfor the observation of interfacial chiral structures and skyrmions. Co/Fe/MgO (100) andW/Ni/Cu (100) bilayers were grown with magnetron sputter deposition in various layerthicknesses and their structure was determined by X-ray reflectometry (XRR). The XRRscans presented a relatively thick-layered Co/Fe/MgO film, while extremely thin and roughW/Ni/Cu bilayers, for the purposes of studying films with broken interfacial inversionsymmetry. This study was concluded with indicative magneto-transport measurements thatalso point to the reconfiguration of the growth procedure.

Dans ce travail, nous nous sommes concentrés sur la création de nanostructures chirales optiquement actives en fabriquant des nanohélices de silice fluorescente afin d’obtenir des matériaux souple, nanométriques, optiquement actifs pour des applications en tant que matériaux nanophotoniques. Dans cette optique, des nanohélices de silice chirales ont été utilisées pour greffer et organiser des nanocristaux inorganiques fluorescents achiraux tels que des quantums dots, des chromophores, des molécules et des polymères fluorescents selon différentes approches. Ces hélices inorganiques ont été formées par procédé sol-gel en utilisant des auto-assemblages hélicoïdaux organiques de molécules amphiphiles (amphiphile gemini cationique, avec un contre-ion chiral le tartrate) en tant que modèles. Tout d'abord, la surface de la silice hélicoïdale a été fonctionnalisée par l’APTES afin de greffer des quantum dots inorganiques ZnS-AgInS2 possédant divers ligands. Dans la deuxième partie, le polymère de dérivé anthracénique fluorescent a été organisé par dépôt et adsorption à la surface de silice hélicoïdale. Afin d’étudier les propriétés chiroptiques, différentes caractérisations ont été réalisées telle que la spectroscopie du dichroïsme circulaire (CD) et celle de la luminescence circulairement polarisée (CPL).Le premier chapitre présente l’étude bibliographique sur différents systèmes d’auto-assemblage organiques chiraux et leurs propriétés chiroptiques. Les études sur la formation de systèmes auto-assemblés chiraux dans différentes conditions, leur morphologie structurale, les techniques de fabrication et leurs applications sont discutées suivies de l'utilisation de nanocristaux fluorescents, à savoir, les quantums dots (QD) et les polymères fluorescents achiraux sur lesquels les propriétés chiroptiques peuvent être obtenues et leurs applications dans les nanodispositifs optiques, les capteurs et la nano-photonique.Dans la première partie du deuxième chapitre, différentes techniques de caractérisation telles que le microscope électronique en transmission (TEM), le microscope électronique en transmission haute résolution (HRTEM), la microscopie confocale, la spectroscopie UV-Vis, celle de la fluorescence, du dichroïsme circulaire (CD) et de la luminescence circulairement polarisée (CPL) sont décrites. Dans la deuxième partie, la synthèse du gemini 16-2-16 ainsi que son mécanisme d'auto-assemblage, et sa transformation en réplica de silice par l'intermédiaire de la chimie sol-gel sont décrits. Ces nanohélices de silice sont fonctionnalisées par le 3-aminopropyltriéthoxysilane (APTES). Leur analyse est effectuée par analyse thermogravimétrique (TGA) et analyse élémentaire (EA).Dans le troisième chapitre, nous nous sommes concentrés sur la synthèse de QDs inorganiques ((ZnS)x-1(AgInS2)x) avec différentes compositions rapport molaire et leurs caractérisations par TEM, TGA, EA, spectroscopie infrarouge à transformée de Fourier (FTIR), mesures de potentiel zêta, spectroscopie d'absorption et d'émission. Quatre types de ligands ont été utilisés, par échange de ligand, pour recouvrir les QDs : sulfure d'ammonium (AS), acide 3-mercaptopropionique (MPA), l-cystéine (L-Cys) et l'oleylamine (OLA). Ces QDs sont greffés à la surface des hélices de silice modifiée par de l’amine suite à des interactions ioniques. Diverses techniques ont été utilisées pour confirmer leur greffage à la surface des hélices de silice, et les propriétés optiques ont été étudiées par spectroscopie d'absorption et d'émission. Après le greffage, différents résultats ont été observés selon le ligand utilisé : la caractérisation par TEM montre que les QDs sont greffés à la surface des hélices de silice. [...] / In this work, we focused on the creation of optically active chiral nanostructures by fabricating fluorescent silica nanohelices in order to obtain optically active nanoscale soft materials for applications as nanophotonics materials. For this purpose, silica chiral nanohelices were used for grafting and organizing achiral fluorescent inorganic nanocrystals, dyes, molecules, and fluorescent polymers through different approaches. These inorganic helices were formed via sol-gel method using organic helical self–assemblies of surfactant molecules (achiral and cationic gemini surfactant, with chiral counterion, tartrate) as templates. First, the surface of helical silica was functionalized by APTES in order to graft inorganic quantum dots ZnS-AgInS2 with different capping ligands. In the second part, fluorescent anthracene derivative polymer was organized via deposition and absorption on the surface of helical silica. To investigate the chiroptical properties, circular dichroism and circularly polarised luminescence characterization were performed.In the first chapter, the bibliographic study on different chiral organic self-assembling systems and their chiroptical properties are shown. The studies on the formation of chiral self-assembled systems in different conditions, structural morphology, fabrication techniques and their applications are discussed followed by the use of fluorescent nanocrystals, i.e., quantum dots (QDs) and achiral fluorescent polymers on which chiroptical properties can be obtained and their applications in optical nanodevices, sensors, and nano-photonics.In the first part of the second chapter, different characterisation techniques such as transmission electron microscope (TEM) , high resolution transmission electron microscope (HRTEM), and confocal microscopy, UV-Vis spectroscopy and fluorescence spectroscopies, as well as circular dichroism (CD) and circularly polarised luminescence (CPL) spectroscopies are described. In the second part, the synthesis of Gemini 16-2-16 as well as their self-assemblies mechanism, and their transformation to silica replica via sol-gel chemistry are described. These silica nanohelices are functionalized by 3-aminopropyltriethoxysilane (APTES). Their analysis is performed by Thermogravimetric analysis (TGA) and elementary analysis (EA).In the third Chapter, we focused on the synthesis of inorganic ((ZnS)x-1(AgInS2)x) QDs with different compositions molar ratio and its characterizations by TEM, TGA, EA, Fourier-transform infrared spectroscopy (FTIR), zeta potential measurements, absorption, and emission spectroscopy. Four types of ligands were used to cap the QDs via phase ligand exchange as follows: ammonium sulphide (AS), 3-mercaptopropionic acid (MPA), l-cysteine (L-Cys) and the fourth one is oleylamine (OLA). These QDs are grafted on the surface of amine-modified silica helices through ionic interaction. Various techniques were used to show the grafting of QDs on the surface of silica helix, and their optical properties were studied using absorption and emission spectroscopy. After grafting, in each case of ligands, different results were observed as follows: The TEM characterization shows that QDs are grafted on the surface of silica helices. In the case of AS-capped QDs, the helical morphology of silica helices after grafting is destroyed; therefore the further ananlysis was not possible. While, in the cases of QDs with three other ligands MPA, OLA and L-cys, dense and homogeneous grafting of the QDs were observed by TEM and the helical morphology was preserved after their grafting. The HRTEM images were taken on the MPA-QDs@silica helices and energy-dispersive x-ray (EDX) analysis was performed in STEM mode, confirming the QDs elements present on the silica surfaces. [...]

Highly fluorescent conjugated polymers (CPs) are an important class of biomaterials used for various biological applications including labelling, sensing, and delivery of biological substances. Synthetic versatility and tunable emission make CPs a superior class of biomaterials. Understanding the structure-function relationship of CPs plays a vital role in designing high performing biomaterials. The cationic CPs are self-assembled to conjugated polymer nanoparticles (CPNs) in an aqueous environment due to their amphiphilicity. The physical and biophysical properties of CPNs are highly dependent on the chemical functionality and backbone structure of CPs. Modulation of the surface property and backbone structure of CPNs play an important role for efficient internalization of CPNs into cells. The goal of this dissertation is to understand the structure function relationship of CPNs in an aqueous environment and the change in their photo physical properties upon the self-assembly of CPNs with different backbone structure upon complexation with biologically significant polysaccharides and cell membrane. This work presents the self-assembly of a set of four cationic CPs with different connectivity and backbone structure upon complexation with a linear polyanion hyaluronic acid (HA). The study of photo physical properties changes upon the complexation with series of Glycosaminoglycans (GAGs) provides more insight about how the self-assembly behavior of cationic CPs changes upon the exposure to negatively charged polysaccharides. The understanding of the self-assembly of CPNs with negatively charged biologically important macromolecules under in vitro conditions can give us an idea of photophysical property changes of CPNs during the treatment of CPNs in the cellular environment. The study of the interaction of CPNs with cell membranes using scanning ion conductance microscopy (SICM)-based topography, potential mapping, and confocal microscopy imaging is presented. CPNs are able to induce transient pore like feature formation on the cell membrane during the cellular internalization process. A comparative study of cellular labelling and delivery of siRNA of five CPNs with guanidine motif is presented. The subcellular localization and delivery of siRNA were dependent on the side chain hydrophilicity. The CPNs fabricated with hydrophilic aminoethoxyethanol possesses excellent cellular imaging with higher siRNA delivery.

MnSi(111) films were grown on Si(111) substrates by solid phase epitaxy (SPE) and molecular beam epitaxy (MBE) to determine their magnetic structures. A lattice mismatch of -3.1% causes an in-plane tensile strain in the film, which is partially relaxed by misfit dislocations. A correlation between the thickness dependence of the Curie temperature (TC) and strain is hypothesized to be due to the presence of interstitial defects. The in-plane tensile strain leads to an increase in the unit cell volume that results in an increased TC as large as TC = 45 K compared to TC = 29.5 K for bulk MnSi crystals. The epitaxially induced tensile stress in the MnSi thin films creates an easy-plane uniaxial anisotropy. The magnetoelastic coefficient was obtained from superconducting quantum interference device (SQUID) magnetometry measurements combined with transmission electron microscopy (TEM) and x-ray diffraction (XRD) data. The experimental value agrees with the coefficient determined from density functional calculations, which supports the conclusion that the uniaxial anisotropy originates from the magnetoelastic coupling. Interfacial roughness obscured the magnetic structure of the SPE films, which motivated the search for a better method of film growth. MBE grown films displayed much lower interfacial roughness that enabled a determination of the magnetic structure using SQUID and polarized neutron reflectometry (PNR). Out-of-plane magnetic field measurements on MBE grown MnSi(111) thin films on Si(111) substrates show the formation of a helical conical phase with a wavelength of 2?/Q = 13.9 ± 0.1 nm. The presence of both left-handed and right-handed magnetic chiralities is found to be due to the existence of inversion domains that result from the non-centrosymmetric crystal structure of MnSi. The magnetic frustration created at the domain boundaries explains an observed glassy behaviour in the magnetic response of the films. PNR and SQUID measurements of MnSi thin films performed in an in-plane magnetic field show a complex magnetic behaviour. Experimental results combined with theoretical results obtained from a Dzyaloshinskii model with an added easy-plane uniaxial anisotropy reveals the existence of numerous magnetic modulated states that do not exist in bulk MnSi. It is demonstrated in this thesis that modulated chiral magnetic states can be investigated with epitaxially grown MnSi(111) thin films on insulating Si substrates, which offers opportunities to investigate spin-dependent transport in chiral magnetic heterostructures based on this system.

A pragmatic method for selecting components and devices from a database or parameterized models is developed in this thesis. The quantitative framework presented here is sufficiently general to accommodate an entire device assembly, a component, or a sub-assembly. The details pertaining to a device or a component are classified into three sets of variables: (i) user-specifications, s (ii) device parameters, p , and (iii) device characteristics, c . Functional, practical, and performance-related attributes that a user can provide comprise user-specifications. Since, most often, a specification cannot be specified as a single number, we allow the user to enter a range with lower and upper bounds. Device parameters comprise the geometry and material properties, and device characteristics include functional requirements and performance criteria. Thus, for a device, all its functional and utility attributes are contained in the union of sets s and c , whereas the geometry and the material properties are in set p . The equations governing the physical behavior of the device are written in terms of s , p , and c . These equations may sometimes be readily available; when they are not, it may be necessary to formulate them as required. By solving the governing equations along with the inequalities that arise from the lower and upper bounds on s , we obtain feasible ranges on p and c . Then, for any pair of device characteristics, a 2D feasible map is drawn, to visually portray the consequences of user-specifications. If the feasible map is null, small, or large, it indicates that the user-specifications are infeasible, stringent, or there is much scope for design, respectively. This can be inferred even before the designs are considered. Juxtaposed on the feasible map are points or lozenges corresponding to the quantitative attributes of the entries in the database. The ones that lie inside the feasible map can be reckoned as meeting the user-specifications and thus, enabling selection. On the other hand, if there is no database or none of the devices in the database lie inside the feasible map, we can identify the feasible ranges of all the design parameters for every point inside the feasible map. This information is useful to the designer to redesign and arrive at feasible designs by using parameterized models of the device. A Graphical User Interface (GUI) is developed to facilitate the user-interaction. The utility of the selection framework is demonstrated with a variety of case-studies including miniature pumps, heat pulse-based soil-moisture sensors, springs, flywheels, compliant mechanisms, micromechanical suspensions, etc. The latter two use kineto-elastic characteristics of deformable components. The framework, when used for materials selection, can be seen as an extension of Ashby’s materials selection method. This is also illustrated with two examples.

La magnétohydrodynamique (MHD) est la science et le formalisme qui décrivent les mouvements d'un fluide conducteur d'électricité. Il est possible que de tels mouvements donnent lieu à l'effet dynamo qui consiste en la génération d'un champ magnétique stable et de grande échelle. Ce phénomène est vraisemblablement à l'origine des champs magnétiques des planètes, des étoiles et des galaxies. <p><p>Il est surprenant qu'alors que les mouvements fluides à l'intérieur de ces objets célestes sont turbulents, les champs magnétiques généré soient de grande échelle spatiale et stables sur de longues périodes de temps. De plus, ils peuvent présenter une dynamique temporelle régulière comme c'est le cas pour le champ magnétique solaire dont la polarité s'inverse tous les onze ans. <p><p>Décrire et prédire les mouvements d'un fluide turbulent reste l'un des problèmes les plus difficiles de la mécanique classique. <p>%La description aussi bien analytique que numérique d'un fluide hautement turbulent est d'une effroyable complexité, si pas tout simplement impraticable. Dans cette situation, <p>Il est donc utile de construire des modèles aussi proches que possible du système de départ mais de moindre complexité de sorte que des études théoriques et numériques deviennent envisageables.<p><p>Deux approches ont été considérées ici. D'une part, nous avons développé des modèles présentant un très petit nombre de degrés de liberté (de l'ordre de la dizaine). Une étude analytique est alors possible. Ces modèles ont une dépendance en les paramètres physiques - nombres de Reynolds cinétique et magnétique et injection d'hélicité - qualitativement similaire aux dynamos célestes et expérimentales.<p><p>D'autre part, les modèles en couches permettent de caractériser les transferts d'énergie entre les structures de différentes tailles présentes au sein du champ de vitesse. Nous avons développé un nouveau formalisme qui permet d'étudier aussi les échanges avec le champ magnétique. <p><p>De plus, nous proposons une étude de la MHD dans le cadre de la décomposition hélicoïdale des champs solénoïdaux - une idée similaire à la décomposition de la lumière en composantes polarisées et que nous sommes les premiers à appliquer à la MHD. Nous avons montré comment exploiter cette approche pour déduire systématiquement des modèles simplifiés de la MHD. En particulier, nos méthodes multiplient le nombre de situations descriptibles par les modèles en couche comme par exemple le problème anisotrope de la turbulence en rotation. Elles permettent aussi de construire des modèles à basse dimension en calquant les résultats de simulations numériques directes. Ces modèles peuvent alors être étudiés à moindre coûts.<p><p><p>_______________<p><p><p><p><p>Magnetohydrodynamics (MHD) is both the science and the formalism that describe the motion of an electro-conducting fluid. Such motion may yield the dynamo effect consisting in the spontaneous generation of a large scale stationary magnetic field. This phenomenon is most likely the reason behind the existence of planetary, stellar and galactic magnetic fields. <p>\ / Doctorat en Sciences / info:eu-repo/semantics/nonPublished

This thesis considers the hydrodynamic instability and optimal forcing of a number of incompressible flow cases. In the first part, the instabilities of three problems that are of great interest in energy and aerospace applications are studied, namely a Blasius boundary layer subject to localized wall-suction, a Falkner–Skan–Cooke boundary layer with a localized surface roughness, and a pair of helical vortices. The two boundary layer flows are studied through spectral element simulations and eigenvalue computations, which enable their long-term behavior as well as the mechanisms causing transition to be determined. The emergence of transition in these cases is found to originate from a linear flow instability, but whereas the onset of this instability in the Blasius flow can be associated with a localized region in the vicinity of the suction orifice, the instability in the Falkner–Skan–Cooke flow involves the entire flow field. Due to this difference, the results of the eigenvalue analysis in the former case are found to be robust with respect to numerical parameters and domain size, whereas the results in the latter case exhibit an extreme sensitivity that prevents domain independent critical parameters from being determined. The instability of the two helices is primarily addressed through experiments and analytic theory. It is shown that the well known pairing instability of neighboring vortex filaments is responsible for transition, and careful measurements enable growth rates of the instabilities to be obtained that are in close agreement with theoretical predictions. Using the experimental baseflow data, a successful attempt is subsequently also made to reproduce this experiment numerically. In the second part of the thesis, a novel method for computing the optimal forcing of a dynamical system is developed. The method is based on an application of the inverse power method preconditioned by the Laplace preconditioner to the direct and adjoint resolvent operators. The method is analyzed for the Ginzburg–Landau equation and afterwards the Navier–Stokes equations, where it is implemented in the spectral element method and validated on the two-dimensional lid-driven cavity flow and the flow around a cylinder. / <p>QC 20171124</p>