Master of Science / Department of Animal Sciences and Industry / James S. Drouillard / Three trials were conducted using dried distiller's grains with solubles (DDGS) to evaluate effects on feedlot performance, carcass characteristics, ruminal fermentation, and diet digestibility in cattle fed steam-flaked corn-based diets. In trial 1, crossbred yearling heifers were used in a finishing trial to evaluate interactions between corn-DDGS feeding levels and roughage source (alfalfa hay vs corn silage) in terms of impact on feedlot performance and carcass characteristics. Experimental diets were based on steam-flaked corn and contained 0% DDGS with 6% alfalfa hay (AH), 0% DDGS with 10% corn silage (CS), 25% DDGS with 6% AH, or 25% DDGS with 10% CS (DM basis). Results indicated no interaction between levels of DDGS and roughage source. Heifers fed DDGS as a partial replacement for steam-flaked corn had similar growth performance and carcass merit compared to heifers fed diets without DDGS. Corn silage and alfalfa hay were comparable roughages when a portion of steam-flaked corn was replaced with DDGS. The second trial was a companion metabolism study in which ruminal fermentation characteristics and diet digestibility were examined in 12 cannulated Holstein steers fed steam-flaked corn finishing diets with or without DDGS, using alfalfa hay or corn silage as roughage sources. Diets were similar to those fed in the performance study and consisted of steam-flaked corn with 0 or 25% DDGS (DM basis) and 6% AH or 10% CS (DM basis). Feeding DDGS decreased ruminal pH and ruminal ammonia concentrations, and digestion of DM and OM were less compared to diets without DDGS. The decrease in digestibility was largely attributable to poorer digestion of CP and, to a lesser extent, a reduction in starch digestion. The third study was designed to investigate effects of pH (5.0, 5.5, and 6.0) on in vitro fermentative activity by ruminal microorganisms from cattle adapted to a finishing diet containing 25% DDGS (DM basis). Higher pH led to greater dry matter disappearance in vitro (P < 0.01). DDGS can be an effective substitute for steam-flaked corn. Efforts to address low ruminal pH and low ruminal ammonia may prove beneficial for improving value of DDGS as cattle feed.

Master of Science / Department of Animal Sciences and Industry / Dale A. Blasi / Low-frequency (LF) radio frequency identification (RFID) transponders (n = 1,993) representing both full-duplex and half duplex air interface technologies were evaluated. Transponders representing five manufacturers and seven types were evaluated for read distance (RD), resonance frequency (RF) and voltage response (VR). LF RFID transceivers (n = 24) were also evaluated for performance and variance as tested by read distance. Transponders were sorted into four categories based on RD performance on three transceivers, “Top 25%,” “Middle 50%,” “Bottom 25%,” and “No Read.” These categories were used for evaluation of transponders and transceivers in experiments one and two, respectively. In experiment one, the mean RF of the “Top 25%” transponders were closer to 134.2 kHz (P < 0.05) within a transponder type (TT). TT and mean RD performance category interacted to affect the VR of transponders (P < 0.05); transponders with lower VR tended to have longer RD within a TT. In experiment two, sixty transponders from the “Middle 50%” were used to evaluate transceivers. Transceivers represented five manufacturers and five transceivers per manufacturer; one transceiver was eliminated from testing due to mechanical problems. There was a significant interaction (P < 0.0001) for TT and transceiver manufacturer. This indicated that transceiver performance was greatly dependant on TT being interrogated. TT and transceiver manufacturer interacted to affect RD variance (P < 0.05) demonstrating that transceiver RD will vary depending on TT being interrogated. In the final study, electromagnetic interference (EMI) was evaluated in fourteen livestock auction markets, four feedlots and five cattle abattoirs. The presence of EMI is known to impair the performance of RFID equipment. However, this phenomenon in livestock management settings has not been quantified in the scientific literature. EMI (134.2 + 25 kHz) was observed in all abattoirs. However, the extent and duration of EMI varied depending on individual abattoir. The processing, load and unload areas were evaluated in commercial feedlots. The most EMI was observed in the processing area. Finally, EMI was observed at the sale ring exit at two livestock auction markets. EMI exists in livestock management settings and may negatively impact the performance of LF RFID.

Master of Science / Department of Animal Sciences and Industry / K C Olson / Prepartum fat supplementation has been associated with improved reproductive performance by cows managed for AI. Our objective was to evaluate the effects of prepartum supplementation with whole cottonseed or whole raw soybeans on response to ovulation synchronization and timed artificial insemination in mature beef cows. Cows (n = 188; average initial BW = 579 [plus or minus] 54 kg) were stratified by BCS and BW and assigned to 3 supplementation treatments: whole raw soybeans (21.6 % fat, 38.6% CP), whole fuzzy cottonseed (21.7% fat, 21.1% CP), or a 50:50 mixture of ground corn and soybean meal (2.6% fat, 30.6% CP). Supplements were fed at 1.8 kg per animal daily for 45 d before the first projected calving date (April 1). Supplementation was continued until each cow calved; thereafter, all cows received the control supplement until May 1. Ovulation was synchronized using the CoSynch + CIDR protocol and cows were bred via AI on June 21. Eleven d after AI, cows were exposed for natural service breeding for 50 d. Conception to AI was assessed 33 d after AI. Overall conception was assessed and conception to AI reaffirmed 126 d after AI. Body weight of cows fed control or oilseed supplements was similar (P > 0.3) at calving, initiation of ovulation synchronization, and at the end of the breeding season. Cottonseed-supplemented cows lost more BW and more BCS (P < 0.03) from the beginning of the trial to calving than those fed soybeans. Proportion of cycling cows was similar (P = 0.57) between treatments. Pregnancy to timed AI and final pregnancy rates were similar (P > 0.75) between control and oilseed-supplemented cows. Conversely, supplementation with cottonseed was associated with increased AI conception (P = 0.08; 54 and 39%, for cottonseed and soybeans, respectively) and greater final pregnancy rate compared to soybean-fed cows (P = 0.03; 100 and 93% for cottonseed and soybeans, respectively). Calf birth weights and calf weights at the end of the breeding season were similar (P > 0.24) between treatments. Effects of cottonseed and soybean supplementation on response to ovulation synchronization and timed AI by beef cows warrant further study.

Master of Science / Department of Diagnostic Medicine/Pathobiology / Tiruvoor G. Nagaraja / Escherichia coli O157:H7 is a food-borne pathogen that causes hemorrhagic enteritis in humans. Cattle are asymptomatic carriers and their feces are the major source of infection. The objective of the first study was to determine the prevalence of E. coli O157:H7 in the gut of cattle at slaughter. Gut contents (rumen, cecum, colon and rectum) were collected from slaughtered cattle (n=815) at a packing plant and prevalence of E. coli O157:H7 was determined. The overall prevalence of E. coli O157:H7 in cattle was 20.6%. The prevalence (%) in the rumen, cecum, colon, and rectum was 4.9, 9.1, 7.7, and 10.3, respectively. Prevalence in rectal content was positively associated (P < 0.01) with that of the rumen or colon and not of the cecum. Pulsed-field gel electrophoresis typing showed that the majority of isolates obtained within the same animal shared a clonal similarity. There was no significant difference in the acid tolerance of ruminal compared to hindgut isolates. It was concluded that hindgut was the major site of prevalence of E. coli O157:H7 in cattle at slaughter. Neomycin, an aminoglycoside, is approved as a feed additive and for use in water to cattle. The objective of the second study was to determine the efficacy of feeding neomycin on fecal shedding of E. coli O157:H7 in cattle. Cattle were randomly assigned to control (n=14) or neomycin (n=10) supplemented group and orally inoculated with nalidixic acid-resistant (NalR) E. coli O157:H7. Neomycin was fed at 10 mg/0.45 Kg body weight for 15 days. Fecal samples and rectoanal mucosal swab (RAMS) samples were collected day before (d -1), on days 1, 3, 5, 10, 13, 17, 20, 24, 27, 31, 34, 38, 41, 44, and 48, and then approximately weekly through day 111. Fecal shedding of NalR E. coli O157:H7 was quantified and prevalence in RAMS was determined. Neomycin significantly reduced prevalence and concentration of E. coli O157:H7 compared to the control. Following two weeks of neomycin feeding, concentration and prevalence were similar between the two groups. Short term neomycin feeding before slaughter may reduce the E. coli O157:H7 load in cattle.

This experiment was conducted to determine the effects of corn silage hybrids and nonforage fiber sources (NFFS) in high forage diets formulated with high dietary proportion of alfalfa hay (AH) and corn silage (CS) on ruminal fermentation and productive performance by early lactating dairy cows. Eight multiparous Holstein cows (4 ruminally fistulated) averaging 36 ± 6.2 d in milk were used in a duplicated 4 × 4 Latin square design experiment with a 2 × 2 factorial arrangement of treatments. Cows were fed 1 of 4 dietary treatments during each of the four 21-d periods. Treatments were: 1) conventional corn silage (CCS)-based diet without NFFS, 2) CCS-based diet with NFFS, 3) brown midrib corn silage (BMRCS)-based diet without NFFS, and 4) BMRCS-based diet with NFFS. Diets were isonitrogenous and isocaloric. Sources of NFFS consisted of ground soyhulls and pelleted beet pulp to replace a portion of AH and CS in the diets. In vitro 30-h NDF degradability was greater for BRMCS than CCS (42.3 vs. 31.2%). Neither CS hybrids nor NFFS affected intake of DM and nutrients. Digestibility of N, NDF, and ADF tended to be greater for cows consuming CCS-based diets. Milk yield was not influenced by CS hybrids and NFFS. However, a tendency for an interaction between CS hybrids and NFFS occurred with increasing milk yield due to feeding NFFS with the BMRCS-based diets. Yields of milk fat and 3.5% FCM decreased when feeding the BMRCS-based diet, and there was a tendency for an interaction between CS hybrids and NFFS by further decreased milk fat concentration because of feeding NFFS with BMRCS-based diet. Although feed efficiency (milk/DM intake) was not affected by corn silage hybrids and NFFS, there was an interaction between CS hybrids and NFFS because feed efficiency increased when NFFS was fed only with BMRCS-based diet. Total VFA production and individual molar proportion were not affected by diets. Dietary treatments did not influence ruminal pH profiles except that duration (h/d) of pH < 5.8 decreased when NFFS was fed in CCS-based diet but not in a BMRCS-based diet, causing a tendency for an interaction between CS hybrids and NFFS. Overall measurements in our study reveal that high forage NDF concentration (20% DM on average) may eliminate potentially positive effects of BMRCS. In the high forage diets, NFFS exerted limited effects on productive performance when they replaced AH and CS. Although the high quality AH provided adequate NDF (38.3% DM) for optimal rumen fermentative function, the low NDF concentration of the AH and the overall forage particle size reduced physically effective fiber and milk fat concentration.

Results from the present study found for the first time that the use of bacterial strains of Lactobacillus acidophilus, Lactobacillus casei, Bifidobacterium thermophilum, and Enterococcus faecium from the commercial product PrimaLac® had the potential to act as a possible probiotic for juvenile red drum. The addition of PrimaLac® probiotics [whether as a water-soluble probiotic (WSP) or in a probiotic enhanced starter feed (PESF)] reduced mortality (%M), enhanced growth rates (MW, LT, SGR, and DGR), improved feed conversion efficiencies (FCEs), and physical condition factors in the juvenile red drum. Improvement was quantified using external morphological condition indices (MCIs) and blood physiological condition indices (PCIs). Results showed a strong positive relationship between MCIs and PCIs, which suggested that probiotics treated fish were in better health (lower MCIs) with lower fasting blood glucose and lactate levels than control fish. Addition of probiotics also resulted in improved water quality (lower nitrate, nitrite, and ammonia) in the treatment tanks compared to controls. Application of PrimaLac® probiotics on the morphology and histology of three different regions of the intestine (proximal, mid-and distal) improved intestinal length (Li), mass (Mi), and digesta mass (Md). In 5μm histological sections examined for differences among treatments (probiotics vs. controls), five variables within each intestinal region were also quantified: (i) perimeter ratio (PR) between the internal perimeter (IP) of the intestinal lumen and the external perimeter (EP) of the intestine where, PR = IP/EP; (ii) width of lamina propria (wLP); (iii) thickness of the muscle layer (tM); (iv) the number of goblet cells per segments (GC); and (v) height of enterocytes (hE). Overall, Li and Mi significantly increased by 13.4 ± 1.2% and 11.8 ± 0.9%, respectively, and Md decreased by 33.2 ± 1.21% compared to controls. Significant increases in microvilli heights, PR (by 21.3 ± 1.2%), tM (by 18.4 ± 0.9%), and increased numbers of GC (by 35.1 ± 2.8%) provided evidence that bacteria species from PrimaLac® (whether in WSP or PESF) affected the intestinal histomorphology of juvenile red drum. Collectively, these changes were partially responsible for increased feed assimilation (supported by reduced digesta) and improved overall juvenile red drum growth and condition. These results will add significantly to the limited database on how probiotics, as possible standard practice at the fish farm, may offer significant benefits for fish production and fish health. Addition of probiotics will also be of benefit to most aquaculture species and not only for red drum, but also for other high-value carnivorous species, such as Atlantic salmon, without threat to natural populations or damaging fisheries-based ecosystems that are already on the edge of collapse from over fishing and pollution.

Master of Science / Department of Animal Sciences and Industry / Joe D. Hancock / Six experiments were completed to determine factors influencing the use of distillers dried grains with solubles (DDGS) in diets for nursery and finishing pigs. In Exp. 1, 105 nursery pigs were fed corn-soybean meal (SBM) based diets with CP concentrations of 22.5, 25, and 27.5%. Overall ADG, ADFI, and G:F were not affected by increasing CP (P > 0.19). In Exp. 2, 105 nursery pigs were fed excess CP from SBM and DDGS. Overall ADG, ADFI, and G:F for pigs fed the control diet were not different from those fed the high CP treatments (P > 0.12). However, pigs fed the DDGS treatment had lower G:F than pigs fed the corn-soy diet with similar CP content (P < 0.04). For Exp. 3, 176 finishing pigs were fed diets with CP concentrations increasing from 12 to 18%. Increasing CP had no effect (P > 0.20) on ADG, ADFI, G:F, and hot carcass weight (HCW). For Exp. 4, 180 finishing pigs were fed excess dietary CP from SBM and DDGS. Pigs fed diets with high CP had lower ADG, ADFI, and HCW, but these results were caused by the diet with 40% DDGS (SBM vs DDGS, P < 0.001). For Exp. 5, 224 nursery pigs were used to determine the effects of extrusion processing on the nutritional value of DDGS. Overall ADG and ADFI were greater for pigs fed the corn-soy control compared to the DDGS treatments (P < 0.02). Extruding the DDGS did not improve ADG or G:F (P > 0.11), but DM and GE digestibility were greater for diets with extruded DDGS vs. unprocessed DDGS (P < 0.04). In Exp. 6, 200 finishing pigs were fed DDGS-based diets formulated for ME, NE, and digestible amino acids. Feeding DDGS lowered ADG (P < 0.09) and ADFI (P < 0.05). Formulating for ME, NE, and digestible amino acids needs improved ADG and G:F (P < 0.002) to that of the corn-soy control diet. In conclusion, moderate excesses of dietary CP does not impact growth performance. Also, extruding DDGS can improve the nutritional value of diets for nursery pig and formulating for ME, NE and digestible amino acid needs can improve growth performance of finishing pigs fed diets with high levels of DDGS.

Master of Agribusiness / Department of Agricultural Economics / Rodney D. Jones / After remaining stable for several decades, corn price has recently had unprecedented price increases and volatility. United States Department of Agriculture (USDA) predicts an average corn price of $5.80 per bushel for 2008, which is 232% of its 28-year (1980-2007) average price of $2.50. The record increase in corn price was the result of increased starch-based ethanol production associated with increased energy costs, and other factors such as a declining value in the United States dollar, and increased global commodity demand. High corn prices have impacted the profitability of the livestock feeding industry. It was less clear how the record high corn prices would affect the cow-calf industry since corn is not a significant input for cow-calf enterprises. This study quantified the relationship between cow-calf profitability and corn price. Because feed costs for a cow-calf producer are among the highest variable costs for the operation, both grazing and non-grazing feed costs were estimated as a function of corn price. Models were estimated to determine if a relationship between corn price and Returns Over Variable Costs (ROVC) at the cow-calf level could be identified. Corn price from 1978-2007 explained none of the variability in grass grazing rental rate, however when the projected 2008 corn price was included in the analysis, corn price explained 10% of the variation in grass grazing rates. Year (linear time trend) and corn price from 1978-2008 explained 88% of historical grass grazing rental rate variability, 71% of alfalfa price variability, and 63% of other hay price variability in Kansas. These results suggest that the new corn market paradigm likely will increase the relationship between corn price and feed costs at the cow-calf level. Several models were evaluated using bulk diesel fuel price, feeder calf price, corn price, alfalfa price, other hay price, and grass grazing rental rate to estimate Kansas cow-calf producer ROVC. Models that included diesel fuel price, feeder calf price, grazing rent, and one of the harvested feeds (corn, alfalfa, or other hay) price explained 90-91% of the variability in ROVC. Models that included diesel fuel price, feeder calf price, and either grazing rent or corn price explained less of the variability in ROVC; using grazing rent explained 89% and using corn price explained 79%. Including grass grazing rental rate along with corn price, feeder calf price, and bulk diesel fuel price improved the model's ability to predict ROVC, explaining 91% of the variability. While cow-calf producers might use very little corn directly in their operations, this research shows that corn price is an important determinant of cow-calf production returns, and corn price can be used by producers to plan for future rising costs in order to maximize returns.

Master of Science / Department of Animal Sciences and Industry / Terry A. Houser / Two experiments were conducted to determine the effects of dried distillers grains with solubles (DDGS) on pork loin and fat quality. In the first experiment, 1,160 barrows (PIC) were used in a 70-d study to determine the influence of DDGS and glycerol on pork loin and fat quality attributes. Barrows were fed a corn-soybean meal based diet with the addition of selected levels of DDGS (0 or 20%) and glycerol (0, 2.5, or 5%) feed stuffs. Loins from the two heaviest pigs in each pen were removed for evaluation of pork loin and fat quality. Experiment two was a pilot study, in which eight non-pregnant sows were fed either 0 or 50% DDGS with a corn soybean meal based diet for 92-d. In the first experiment, there were no DDGS x glycerol interactions for purge loss %, instrumental color (L*a*b*), visual color, marbling score, drip loss %, visual color, pH, Warner-Bratzler shear force (WBSF), cook loss %, myofibrillar tenderness, juiciness, pork flavor intensity, connective tissue amount, and overall tenderness. There was a DDGS x glycerol interaction (P<0.03) for off-flavor intensity. Pigs fed diets with 20% DDGS had higher WBSF values, lower myofibrillar tenderness, lower overall tenderness scores, lower connective tissue scores, and had more off-flavors (P<0.05). Loin fatty acid analysis revealed an increase in palmitoleic, linoleic, and eicosadienoic acids (P<0.05) and iodine value (P<0.03) for pigs fed 20% DDGS. In the second experiment, there were no differences (P>0.64) in BW or backfat change for sows fed either 0 or 50% DDGS. No differences (P>0.23) in lipid oxidation from lean trimmings as measured by 2-thiobarbituric acid reactive substances (TBARS) assay were reported either initially or after 5 d of retail display for sows fed either 0 or 50% DDGS. As expected, lipid oxidation increased (P<0.003) as measured by TBARS assay for both treatments from d 1 to 5. Jowl fatty acid analysis revealed an increase in linoleic acid (P<0.01), total polyunsaturated fatty acids (P<0.01), and the ratio of polyunsaturated fatty acids to saturated fatty acids (P<0.03) for sows fed 50% DDGS.

Master of Science / Department of Agronomy / Clenton E. Owensby / Currently there are no model inputs for eastern gamagrass [Tripsacum dactyloides (L.) L] for use in the National Research Council's (NRC) beef cattle model. This study was conducted to determine model inputs for two eastern gamagrass varieties for use with the forage database of the NRC model. Cattle producers in the Midwestern US will be able to evaluate eastern gamagrass in a forage system and estimate net energy for maintenance (NEm), metabolizable protein (MP), and degradable intake protein (DIP) balance for various production scenarios. Eastern gamagrass varieties 'Iuka' and 'Pete' were arranged in a split-plot randomized complete block experiment with four replications. Varieties were whole plots with harvest maturities as split plots. Plant tissue was harvested from both varieties at four maturities: vegetative/early elongation, anthesis, seed shattering and dormancy. Various compositional attributes were determined on forage samples to enable the determination of model inputs for predicting energy and protein balances. A slight difference between varieties was found for crude protein concentration (p<0.05). Differences (p<0.05) due to maturity were found for all analyses used in the model, corroborating the decline in nutritive value of eastern gamagrass with advancing maturity. Neutral detergent fiber (NDF) ranged from 593 g kg-1 at the vegetative/early elongation stage of maturity to 731 g kg-1 at dormancy. Assumed animal and environmental inputs were used for beef cattle at two stages: nonlactating 160 d prepartum and 60 d peak lactation. Energy and protein balance were estimated using level I of the model. The vegetative/early elongation stage of development supplied the greatest amount of MP. Digestible intake protein declined as plant tissue matured. All but the vegetative/early elongation stage of maturity were limited in DIP for cows in both stages of production. Soybean meal was used as a protein supplement in amounts ranging from 0.8 kg to 1.4 kg to meet nutritional demands of cattle grazing eastern gamagrass at anthesis, seed shattering and dormancy. In the simulations conducted, eastern gamagrass would be an acceptable forage source for beef cattle provided that appropriate protein supplementation was given when the forage was at more advanced stages of maturity.