>Magister Scientiae - MSc / Abiotic stress, mainly in the form of extreme temperatures, drought and salinity has caused major crop losses worldwide, putting a severe strain on agriculture. Salinity severely limits plant growth and productivity and affects all aspects of the plant’s development including the most crucial stage; germination. This study investigated the effect of salt (NaCl) stress on Sorghum bicolor seedlings and the role of exogenously applied calcium (Ca2+) to ameliorate the effects of salt stress during germination. Sorghum seeds were germinated in the presence and absence of various NaCl (100, 200 and 300 mM) and Ca2+ (5, 15 and 35 mM) concentrations. Several assays including physiological (germination and growth assays), biochemical (osmolytes and oxidative stress markers), anatomical (epidermal and xylem layers) and expression profiles of key genes [antioxidant (SbSOD, SbAPX2 and SbCAT3), Salt Overly Sensitive (SbSOS1, 2 and 3) pathway enzymes and the vacuolar Na+/H+ exchanger antiporter2 (SbNHX2)] were investigated. Salt stress delayed germination and negatively affected growth as observed by the reduced root and shoot length and decreased fresh and dry weight. There was an increase in proline content and oxidative stress markers (H2O2 and MDA) under salt stress. Oxidative stress resulted in damage to the epidermal and xylem layers as observed on Scanning Electron Microscopy (SEM) images. Quantitative real-time polymerase chain reaction revealed that salt stress induced the expression of SbAPX2, SbCAT3 and SbSOS1 genes, whereas SbSOD4A, SbSOS2, SbSOS3 and SbNHX2 genes were not affected by salt. Exogenous application of Ca2+ counteracted the harmful effects of salt stress by improving germination efficiency, promoting seedling growth, reducing oxidative damage and the Na+/K+ ratio, indicating the protective effect. Ca2+ also effectively protected the epidermis and xylem layers from the severe damage caused by salt stress. In the presence of Ca2+ the expression of SbAPX2 and SbCAT3 was reduced except for the SbNHX2 gene, which increased by 65-fold compared to the control. The results obtained suggests that sorghum is able to respond to salt stress by inducing osmolytes, the antioxidant defence system as well as the SOS pathway. Furthermore, 5 mM Ca2+ was determined as the optimum Ca2+ concentration required to enhance sorghum’s tolerance to salt stress.

京都大学 / 新制・論文博士 / 博士(医学) / 乙第13429号 / 論医博第2233号 / 新制||医||1053(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 長船 健二, 教授 妹尾 浩, 教授 川口 義弥 / 学位規則第4条第2項該当 / Doctor of Medical Science / Kyoto University / DFAM

京都大学 / 0048 / 新制・課程博士 / 博士(医学) / 甲第20269号 / 医博第4228号 / 新制||医||1021(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 横出 正之, 教授 湊谷 謙司, 教授 瀬原 淳子 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM

京都大学 / 0048 / 新制・課程博士 / 博士(生命科学) / 甲第21223号 / 生博第392号 / 新制||生||52(附属図書館) / 京都大学大学院生命科学研究科統合生命科学専攻 / (主査)教授 上村 匡, 教授 根岸 学, 教授 松崎 文雄 / 学位規則第4条第1項該当 / Doctor of Philosophy in Life Sciences / Kyoto University / DFAM

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<p>Aortic bodies (ABs) are putative peripheral arterial chemoreceptors located near the aortic arch. They are hypothesized to contribute to O₂ homeostasis by sensing arterial O₂ content and initiating cardiovascular reflexes during hypoxia; however, information on their cellular physiology is lacking. The primary goal of this thesis was to elucidate chemosensory mechanisms among mammalian (rat) AB cells, located specifically at the bifurcation of the left vagus nerve and recurrent laryngeal nerve (RLN), where they are found in association with a group of local neurons (>30). In vagus nerve-RLN whole-mounts, AB chemoreceptor (type I) cells were immunoreactive against the vesicular acetylcholine (ACh) transporter, and were surrounded by nerve terminals immunopositive for purinergic P2X2 and P2X3 receptor subunits, suggesting that ACh and ATP may act as neurotransmitters as in the related carotid body. In a novel dissociated AB culture model, subsets of type I cells exhibited elevated intracellular Ca²⁺ responses to hypoxia, isohydric hypercapnia, isocapnic acidosis, and acidic hypercapnia, demonstrating their direct chemosensitivity for the first time. Interestingly, surviving local neurons also responded to these chemostimuli, suggesting that they are sensory. Patch clamp electrophysiological and Ca²⁺ imaging studies revealed functional heteromeric P2X2/3 and nicotinic ACh receptors on local neurons, consistent with ACh and/or ATP mediating chemotransmission between receptor cells and local neurons. These neurons were also found to be interconnected by electrical synapses. Finally, the short-term survival of red blood cells (RBCs) in AB cultures, along with the finding that blood-borne factors (e.g. ATP released from RBCs) may have access to AB nerve terminals <em>in situ</em>, implicates RBCs as O₂-sensors in AB function. Altogether, these results suggest an important role for purinergic P2X2/3 receptors on local neurons/nerve terminals and ATP release from type I cells and RBCs, in the unique ability of ABs to sense and process information about blood O₂ content.</p> / Doctor of Philosophy (PhD)

Yes / Skin pigmentation is directed by epidermal-melanin units, characterized by long-lived and dendritic epidermal melanocytes (MC) that interact with viable keratinocytes (KC) to contribute melanin to the epidermis. Previously we reported that MC:KC contact is required for melanosome transfer, that this can be enhanced by filopodial and by UVR/UVA irradiation, which can up-regulate melanosome transfer via Myosin X-mediated control of MC filopodia. Both MC and KC express Ca2+-dependent E-cadherins. These homophilic adhesion contacts induce transient increases in intra-KC Ca2+, while ultraviolet radiation (UVR) raises intra-MC Ca2+ via calcium selective ORAI1 ion channels; both are associated with regulating melanogenesis. However, how Ca2+ triggers melanin transfer remains unclear, and here we evaluated the role of E-Cadherin in UVR-mediated melanin transfer in human skin cells. MC and KC in human epidermis variably express filopodia-associated E-Cadherin, Cdc42, VASP and β-catenin, all of which were upregulated by UVR/UVA in human MC in vitro. Knockdown of E-cadherin revealed that this cadherin is essential for UVR-induced MC filopodia formation and melanin transfer. Moreover, Ca2+ induced a dose-dependent increase in filopodia formation and melanin transfer, as well as increased β-catenin, Cdc42, Myosin X, and E-Cadherin expression in these skin cells. Together these data suggest that filopodial proteins and E-Cadherin, which are upregulated by intracellular (UVR-stimulated) and extracellular Ca2+ availability, are required for filopodia formation and melanin transfer. This may open new avenues to explore how Ca2+ signalling influences human pigmentation.

La dépression est un trouble de l’humeur qui affecte environ 15% de la population mondiale et qui peut être déclenché par de nombreux facteurs incluant le stress. De plus, un débalancement de l’axe Hypothalmo-hypophyso-surrénalien est présent chez plusieurs patients dépressifs. À l’heure actuelle, les antidépresseurs se révèlent être le moyen le plus efficace pour traiter cette maladie. Les antidépresseurs exercent leur fonction thérapeutique principalement en activant le facteur de transcription CREB via la voie de signalisation AMPc-dépendante. Cette activation résulte en une augmentation de la transcription de certains gènes impliqués dans la protection et la survie cellulaire tel que BDNF. Or CREB peut aussi être activé par la voie de signalisation du calcium. Les travaux rapportés dans cette thèse traitent de la possible implication de protéines de la voie du calcium, plus particulièrement la CaMKKα et la CaMKKβ, dans le mécanisme d’action des antidépresseurs. Dans un premier temps, nous avons clôné l’ARNm de la CaMKKβ de la souris et avons étudié la distribution de l’expression génique des CaMKKs dans le système nerveux central de la souris. Ceci nous a permis de constater qu’elles étaient exprimées fortement dans les régions impliquées dans la dépression. Dans la deuxième phase des travaux, nous avons utilisé l’approche par hybridation in situ pour étudier l’effet d’un traitement chronique aux antidépresseurs sur l’expression génique des CaMKKs. De plus, nous avons utilisé une souris transgénique possédant une dysfonction des récepteurs aux glucocorticoïdes (GR) et servant comme modèle neuroendocrine de la dépression. L’analyse des différents degrés d’expression de l’ARNm des CaMKKs et de BDNF montre que différentes régions réagissent au traitement aux antidépresseurs ou au dysfonctionnement des GR. Parmi celles-ci, le cortex préfrontal et l’hippocampe se révèlent particulièrement intéressants par leur implication dans la dépression. L’ensemble de nos résultats nous permet de proposer que la voie de signalisation du calcium soit également une cible des antidépresseurs. / Major depression is a mood disorder that affect 15% of the population and that can be caused by various factors, including stress. Hypothalamo-pituiary-adrenal axis hyperactivity is present in a majority of depressive patients. Antidepressant drugs are the best therapy that exists to treat depression. They exert their therapeutic action by activating the AMPc signaling pathway and the transcription factor CREB, which leads to an increase in the transcription of genes implicated in cell protection and surviving, like BDNF. CREB can also be activated by the calcium-signaling pathway. This thesis reports the possible implication of the CaMKKα and CaMKKβ in the mechanism of action of antidepressants. We first cloned the mRNA of the mouse CaMKKβ and described the distribution of both CaMKKs in the mouse central nervous system. They were strongly expressed in brain regions that are implicated in major depression. Next, we used in situ hybridization to study the effect of chronic antidepressant treatment on the gene expression of the CaMKKs. Moreover, we used a transgenic mouse characterized by a dysfunction of the glucocorticoid receptors (GR) as a neuroendocrine model of depression. The analysis of the different levels of expression of the CaMKKs and BDNF shows that different brain areas react to antidepressants or to GR dysfunction. For instance, prefrontal cortex and hippocampus are of particular importance due to their implication in depression. Our results suggest that the calcium siganling pathway might be a target of antidepressant drugs.

Les fluctuations du taux de calcium (Ca2+) intracellulaire sont impliquées dans les événements de signalisation et de régulation de différents processus cellulaires. Alors que le role du Ca2+ dans la réponse des plantes lors des interactions mycorhiziennes à arbuscules (MA) interactions est bien documentée, il n’existe aucune information concernant la régulation ou le rôle de ce messager secondaire chez le symbiote fongique. La base moléculaire de l'homéostasie calcique fongique dans la symbiose MA a été analysée en étudiant l'expression de gènes fongiques liés au Ca2+. Dans un premier temps, des gènes de G. mosseae codant putativement pour une protéine kinase-like MAP3k (Gm2) et une P-type ATPase (Gm152) ont été étudiés. L’expression des deux gènes est stimulée par les exudats racinaires d’A. sinicum, suggérant un rôle dans les interactions précoces avant l'établissement de la symbiose. L’obtention de la séquence d'ADNc pleine longueur de Gm152 a confirmé son identité. Une étude plus approfondie du rôle de Ca2+ dans les processus fongiques impliqués dans la symbiose MA a été réalisée chez G. intraradices. L'expression de sept gènes fongiques encodant six protéines de transport membranaire calcique et une protéine kinase nucléaire, sélectionnés du séquençage transcriptomique du G. intraradices, était stimulée lors de la colonisation des racines de M. truncatula type sauvage (lignée J5) mais pas chez le mutant non-mycorhizienne dmi3/Mtsym13. La cartographie par microdissection laser des transcrits des gènes fongiques a indiqué une activation différentielle dans les arbuscules et/ou dans hyphes intercellulaires. Les variations tempo-spatiales de l'expression des gènes fongiques suggèrent des roles différents dans le développement ou le fonctionnement de la symbiose MA. L’ADNc pleine longueur a été obtenue de trois gènes de G. intraradices encodant un PMR1-like réticulum endoplasmique ATPase, un VCX1-like transporteur ionique vacuolaire et un CCaMK nucléaire pour des analyses fonctionnelles chez la levure afin de mieux comprendre leur rôle dans la symbiose MA. Les mécanismes par lesquels les protéines liées au Ca2+ pourraient jouer un rôle chez G. intraradices dans la mobilisation et la perception du messager secondaire au cours des interactions MA sont discutés / Fluctuations in intracellular (Ca2+) calcium levels generate signaling events and regulate different cellular processes. Whilst the implication of Ca2+ in plant cell responses during arbuscular mycorrhiza (AM) interactions is well documented, nothing is known about the regulation or role of this secondary meesenger in the fungal symbiont. The molecular basis of fungal calcium homeostasis in the AM symbiosis was analyzed by investigating the expression of Ca2+-related fungal genes. In a first study, G. mosseae genes putatively encoding a MAP3k-like protein kinase (Gm2) and a P-type ATPase (Gm152) were investigated. Both Ca2+-related genes were up-regulated by A. sinicum root exudates, suggesting a role in early interactions prior to symbiosis establishment. The full-length cDNA sequence of Gm152 obtained from germinating spores of G. mosseae confirmed its identity. The role of Ca2+ in fungal processes leading to establishment of an AM symbiosis was investigated in more detail in G. intraradices-M. truncatula interactions. Enhanced expression of genes encoding six membrane transport proteins and one nuclear protein kinase, selected from the G. intraradices transcriptome database, was related to colonization of wild-type M. truncatula (line J5) roots and not observed with the mycorrhiza-resistant mutant dmi3/Mtsym13. Laser microdissection mapping of transcripts indicated that the Ca2+-related G. intraradices genes were differentially up-regulated in arbuscules and/or in intercellular hyphae. The tempo-spatial variations in fungal gene expression suggest different roles in the development or functioning of the AM symbiosis. Full-length cDNA of three G. intraradices genes putatively encoding a PMR-like endoplasmic reticulum P-type ATPase, a VCX1-like vacuolar Ca2+ ion transporter and a nuclear CCaMK were obtained for functional analyses in yeast mutants to gain insight into their role in the mycorrhizal symbiosis. Possible mechanisms are discussed in which Ca2+-related proteins of G. intraradices may play a role in the mobilization and perception of the intracellular messenger by the AM fungus during symbiotic interactions with host roots