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Determining the Role of Wnt5a Signaling in Embryonic Limb Outgrowth via Clonal AnalysisSowby, Whitney Herrod 14 August 2008 (has links) (PDF)
The exact mechanisms that regulate limb outgrowth the mouse embryo are unknown. Although there are several models, we favor a hypothesis where cells become polarized by signals secreted from the AER which orient their cell migration and/or divisions causing limb outgrowth. Clonal analysis has provided a mechanism to study cell behavior. We have generated a targeting construct containing the Fgf8 inhibitor, Sprouty2, in order to generate mutant clones for behavioral analyses in the limb. In order to more effectively study clonal behavior we report the modification of a novel clonal analysis approach, exo-utero surgery. We have modified, enhanced and proven that this technique can be used successfully in mouse embryos in which we directly apply 4-OHtamoxifen to the limb to induce YFP or β-gal reporter genes in limb mesenchyme. Using this method, we can closely control the timing and location of the induced clones and observe cell behavior during embryonic limb development. Phenotypes of Wnt5a-/- and Ror2-/- exhibit shortened limbs suggesting they function in a similar pathway. Wnt5a and Ror have been found to "colocalize" in the growing limb bud and have also been shown to bind in vitro. Here we show preliminary results about Wnt5a and Ror2 in vivo association by immunoprecipitation of limb bud extracts.
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Evolutional transition of HBV genome during the persistent infection determined by single-molecule real-time sequencing / 1分子リアルタイムシーケンシングを用いたB型肝炎ウイルス持続感染下におけるウイルスゲノムの進化的変遷の解析Arasawa, Soichi 24 July 2023 (has links)
京都大学 / 新制・課程博士 / 博士(医学) / 甲第24841号 / 医博第5009号 / 新制||医||1068(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 朝長, 啓造, 教授 波多野, 悦朗, 教授 竹内, 理 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM
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Advanced Pathogenetic Concepts in T-Cell Prolymphocytic Leukemia and Their Translational ImpactBraun, Till, Dechow, Annika, Friedrich, Gregor, Seifert, Michael, Stachelscheid, Johanna, Herling, Marco 30 March 2023 (has links)
T-cell prolymphocytic leukemia (T-PLL) is the most common mature T-cell leukemia. It is a
typically aggressively growing and chemotherapy-resistant malignancy with a poor
prognosis. T-PLL cells resemble activated, post-thymic T-lymphocytes with memorytype
effector functions. Constitutive transcriptional activation of genes of the T-cell
leukemia 1 (TCL1) family based on genomic inversions/translocations is recognized as
a key event in T-PLL’s pathogenesis. TCL1’s multiple effector pathways include the
enhancement of T-cell receptor (TCR) signals. New molecular dependencies around
responses to DNA damage, including repair and apoptosis regulation, as well as
alterations of cytokine and non-TCR activation signaling were identified as perturbed
hallmark pathways within the past years. We currently witness these vulnerabilities to be
interrogated in first pre-clinical concepts and initial clinical testing in relapsed/refractory TPLL
patients. We summarize here the current knowledge on the molecular understanding
of T-PLL’s pathobiology and critically assess the true translational progress around this to
help appraisal by caregivers and patients. Overall, the contemporary concepts on T-PLL’s
pathobiology are condensed in a comprehensive mechanistic disease model and
promising interventional strategies derived from it are highlighted.
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Clonality And Genetic Diversity In Polygonella Myriophylla, A Lake Wales Ridge Endemic PlantMetzger, Genevieve 01 January 2010 (has links)
Although capable of sexual reproduction, many plants also rely heavily on clonal reproduction. The formation of multiple, physiologically-independent units with the same genotype has important implications for spatial genetic structure and genetic diversity in these plants. The endangered scrub-dwelling perennial, Polygonella myriophylla is known to reproduce both sexually and clonally but no study to date has been able to investigate the spatial genetic patterns that occur in this species. I use microsatellite markers to investigate questions about clonal structure and genetic diversity in five populations of P. myriophylla and address some of the implications of my findings for conservation of this species: Overall, I find that 57% of sampled clusters of P. myriophylla are composed of a single genet (genetic individual) with multiple physiological units (ramets) while the remainder are made up of two or more genets. I found differences in both clonal reproduction and genetic diversity among populations. I also found evidence of limited gene flow even over small spatial scales (less than 10 km) and for at least 4 genetic clusters occurring within the species range. Despite high levels of genetic diversity overall, there is evidence of reduced genetic diversity in two populations My results suggest that high levels of clonality may be important in maintaining genetic diversity in P. myriophylla. I also provide evidence that dirt roadsides may not represent a refuge for this species.
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Influences of Environmental Variability, Genetics and Plant Size on Variation in Sexual and Clonal Reproduction and Allocation of Resources in Three Wetland Plant SpeciesNicholls, Ann M. 18 May 2011 (has links)
No description available.
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Experimental Test of Solitary Wave Theory in Viral PopulationsDutta, Ranendra Nath 18 December 2008 (has links)
No description available.
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Quantitative analysis on the origins of morphologically abnormal cells in temporal lobe epilepsySingh, Shatrunjai P. January 2015 (has links)
No description available.
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Population Genetic Investigation of the White-Nose Syndrome pathogen, Pseudogymonascus destructans, in North AmericaForsythe, Adrian January 2020 (has links)
Fungal infections of animals have become an increasingly important global issue. White-Nose Syndrome is an ongoing fungal epizootic of North American hibernating bats, caused by epidermal infections of the fungus, Pseudogymnoascus destructans. Infections emerged early in 2006 in New York State and have since spread to 35 US States and seven Canadian Provinces, with rates of mortality exceeding 90% in some bat colonies. As an emerging outbreak in North America, the transmission of P. destructans is assumed to occur in a radial fashion outwards from the point of origin. In addition, the factors that may influence P. destructans transmission have been postulated, but not tested before. Lastly, as reproduction is assumed to be strictly clonal in North America, invasive populations should have low genetic diversity, and may even accumulate deleterious mutations over time. The aim of my PhD research is to test these assumptions regarding the spread, evolution, and adaptation of P. destructans using combination of genotyping methods. My results showed how P. destructans isolates have shifted in terms of phenotypes and physiological capabilities since being introduced. In addition, I describe patterns of connectivity across the landscape, which are more consist with the level of anthropogenic activity than variation in climate. The mutations common to all invasive strains of P. destructans are associated with adaptations that have occurred since being introduced from Europe, some with relevant metabolic functions that fit their pathogenic lifestyle. Together, my results revealed significant phenotypic and genotypic changes during the spread of P. destructans in North America. The factors identified here that influence the phenotypic and genotypic changes should help developing better management strategies against the White-Nose Syndrome pathogen. / Thesis / Doctor of Philosophy (PhD)
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Female sterility associated with increased clonal propagation suggests a unique combination of androdioecy and asexual reproduction in populations of Cardamine amara (Brassicaceae)Tedder, Andrew, Helling, M., Pannell, J.R., Shimizu-Inatsugi, R., Kawagoe, T., van Campen, J., Sese, J., Shimizu, K.K. 13 September 2019 (has links)
Yes / The coexistence of hermaphrodites and female-sterile individuals, or androdioecy, has been documented in only a handful of plants and animals. This study reports its existence in the plant species Cardamine amara (Brassicaceae), in which female-sterile individuals have shorter pistils than seed-producing hermaphrodites.
Morphological analysis, in situ manual pollination, microsatellite genotyping and differential gene expression analysis using Arabidopsis microarrays were used to delimit variation between female-sterile individuals and hermaphrodites.
Female sterility in C. amara appears to be caused by disrupted ovule development. It was associated with a 2.4- to 2.9-fold increase in clonal propagation. This made the pollen number of female-sterile genets more than double that of hermaphrodite genets, which fulfils a condition of co-existence predicted by simple androdioecy theories. When female-sterile individuals were observed in wild androdioecious populations, their ramet frequencies ranged from 5 to 54 %; however, their genet frequencies ranged from 11 to 29 %, which is consistent with the theoretically predicted upper limit of 50 %.
The results suggest that a combination of sexual reproduction and increased asexual proliferation by female-sterile individuals probably explains the invasion and maintenance of female sterility in otherwise hermaphroditic populations. To our knowledge, this is the first report of the coexistence of female sterility and hermaphrodites in the Brassicaceae.
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Examining Wrack in Mosquito Lagoon to Analyze Biodiversity And Seagrass ViabilityJerrell, Nicole 01 January 2024 (has links) (PDF)
Seagrass restoration of Halodule wrightii, has become crucial as seagrass coverage in the Indian River Lagoon (IRL) declined by 58% between 2011 and 2019. To understand the abundance of seagrass fragments available for natural recruitment and restoration, we tracked the abundance of viable fragments found in the wrack in Mosquito Lagoon. Wrack is plant material, including seagrass fragments, mangrove propagules, and detritus. Seagrass fragments were considered viable if the fragment had an apical meristem present. Replicate samples were collected from 5 locations every two weeks, starting in September 2022 and ending in September 2023, and the samples were processed in the laboratory. To date, H. wrightii is the most common species and is most abundant during the fall season. Among the total H. wrightii fragments collected, 54.1% had apical meristems, the growth tips needed to produce leaf-bearing shoots. Annually, on average, 7 fragments with apical meristems per square meter a month were recorded. Among only fragments with an apical meristem found during this study, 92.8% had less than five shoots. The average fragment that was washing ashore had only two shoots. This study will assist restoration practitioners in understanding the availability of viable H. wrightii fragments for natural and active restoration efforts.
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