Safe drinking water is essential for life, yet at least two billion people around the world consume water contaminated with pathogens among other pollutants. Standard methods like polymerase chain reaction (PCR) and membrane filtration have been developed to detect enteric pathogens in water. However, these methods are limited in their accessibility due to long wait times to obtain results, and the requirements of skilled expertise, electricity, and laboratory equipment. This research has focused on addressing some of these limitations by analyzing the mechanisms of work and optimizing an indirect colorimetric nanosensor developed in previous research. The colorimetric nanosensor investigated herein relies on a competitive binding mechanism. When positively charged gold nanoparticles coated with polyethyleneimine (PEI-AuNPs) are added to a water sample containing negatively charged Escherichia coli (E. coli) and β-galactosidase (β-Gal) enzyme, the PEI-AuNPs will preferably bind to E. coli. This leaves β-Gal free in solution to hydrolyze chlorophenol red β-D-galactopyranoside (CPRG) (a substrate added to the water sample). The hydrolysis reaction of CPRG results in changing the solution color and the magnitude of this color change is a function of the amount of E. coli present in a water sample. It was hypothesized herein that the governing factor for the nanosensor functionality is the surface charge/Coulombic interactions rather than the nanoparticle composition or the type of chemical coating on the nanoparticle surface. To test the research hypotheses, positively charged nanoparticles with different compositions and chemical coatings as well as positively charged polymers were tested herein as potential detection agents for E. coli in water using the competitive binding assay reported in the literature with some modifications. This study produced three main findings that support the research hypotheses. First, gold nanoparticles (AuNPs) were not critical to the nanosensor functionality – other positively charged nanoparticles of silver and iron oxide coated with branched PEI were able to detect E. coli as low as 105 and 107 CFU/mL, respectively. Second, the branched PEI polymer itself (i.e., without a nanomaterial) detected E. coli at 107 CFU/mL. Third, in the absence of E. coli, (1-Hexadecyl) Trimethylammonium Bromide (CTAB), a positively charged polymer, inhibited the hydrolysis of CPRG by β-Gal. This inhibition suggests that other positively charged polymer types have potential applications in colorimetric detection assays that are based on the competitive binding mechanism. The observed behavior with the aforementioned sensing agents indicated that the positive charge was likely responsible for the detection of microbes using this competitive binding detection approach rather than the type of the chemical coating/agent used. These findings open possibilities for more types of recyclable and cost effective nanomaterials and polymers to be developed for detection of E. coli using this competitive binding approach. Furthermore, research is warranted for optimizing the sensing agents tested in this study to lower their detection limit and assess their recyclability.

Biosensors have proven to be a powerful tool for detecting diverse targets, such as proteins, DNA, and small molecules representing disease biomarkers, toxins, drugs and their metabolites, environmental pollutants, agrichemicals, and antibiotics with high sensitivity and specificity. The major objective of the research described in this dissertation was to develop low cost, low sample volume, highly sensitive and specific AuNP-based colorimetric sensor platforms for the detection of DNA and small molecules. With this in mind, we propose an instrument-free approach in chapter three for the detection of NADH with a sensor constructed on a paper substrate, based on the target-induced inhibition of AuNP dissolution. The successful detection of this important molecule opens the door to numerous possibilities for dehydrogenase characterization, because NAD+/NADH are essential cofactors for more than 300 dehydrogenase enzymes. To further increase the sensitivity of our hybridization-based assay for DNA detection, we developed an enzyme-assisted target recycling (EATR) strategy in chapter four and have applied such an EATR-based colorimetric assay to detect single-nucleotide mismatches in a target DNA with DNA-functionalized AuNPs. This assay is based on the principle that nuclease enzymes recognize probe–target complexes, cleaving only the probe strand. This results in target release, enabling subsequent binding to and cleavage of another probe molecule. When the probe is conjugated onto AuNPs, complete cleavage from the AuNP surface produces a detectable signal in high ionic strength environments as the nanoparticles undergo aggregation. With such enzyme-assisted amplification, target detection can occur with a very low nM detection limit within 15 minutes. The extent of DNA loading on the AuNP surface plays an important role in the efficiency of DNA hybridization and aptamer-target assembly. Many studies have shown that high surface-coverage is associated with steric hindrance, electrostatic repulsive interactions and elevated surface salt concentration, whereas low surface-coverage can result in nonspecific binding of oligonucleotides to the particle surface. In chapter five, we investigated DNA surface coverage effects, and apply this optimization in conjunction with a highly-specific aptamer to develop a sensitive colorimetric sensor for rapid cocaine detection based on the inhibition of nuclease enzyme activity.

A controlled assembly of natural beta-cyclodextrin modified Au NPs mediated by dopamine is demonstrated. Furthermore, a simple and sensitive colorimetric detection for dopamine is established by the concentration-dependent assembly.

Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2018-07-04T11:50:13Z No. of bitstreams: 2 Tese - Karoliny Almeida Oliveira - 2017.pdf: 20054165 bytes, checksum: a9c846097d699d587dbf63736056a5a3 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) / Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2018-07-04T12:33:06Z (GMT) No. of bitstreams: 2 Tese - Karoliny Almeida Oliveira - 2017.pdf: 20054165 bytes, checksum: a9c846097d699d587dbf63736056a5a3 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) / Made available in DSpace on 2018-07-04T12:33:06Z (GMT). No. of bitstreams: 2 Tese - Karoliny Almeida Oliveira - 2017.pdf: 20054165 bytes, checksum: a9c846097d699d587dbf63736056a5a3 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2017-12-12 / Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / This thesis describes the development of colorimetric sensors in polymeric materials for the biomarkers detection for clinical diagnostics. The devices were manufactured with 96 microzones from the direct printing technology, using transparency film. The printed microplates were used to detect dengue, glucose and total proteins. Dengue detection in patient serum samples was performed with the capture and indirect ELISA assay for the detection of immunoglobulin M and immunoglobulin G, respectively. After the acquisition of the images with a cellular camera, a color histogram analysis and the principal component analysis (PCA) were performed. The results of these analyzes allowed to easily differentiate the groups of serum samples from patients who were infected and non-infected with the dengue virus. In order to promote carboxyl groups on the surface of the polyester film, this was modified by two methodologies: alkaline hydrolysis and adsorption of a polymer. The glucose assay was performed on the films modified by both methodologies and detected by a cellular camera, and the detection limits found were 0.70 mM and 0.93 mM for the polymer and hydrolyzed film, respectively. In addition, the biuret assay was performed on the microplates for the analysis of total proteins in canine serum samples using a bench scanner as the detection system. The limit of detection was 9.7 μM for the analytical curve ranging from 0 to 200 μM albumin. / Essa tese descreve o desenvolvimento de sensores colorimétricos em materiais poliméricos para detecção de biomarcadores para diagnósticos clínicos. Os dispositivos foram fabricados com 96 zonas a partir da tecnologia de impressão direta, utilizando filme de transparência. As microplacas impressas foram utilizadas para realizar a detecção de dengue, glicose e proteínas totais. A detecção de dengue em amostras de soros de pacientes foi realizada com o ensaio imunoenzimático (ELISA) captura e indireto para a detecção da imunoglobulina M e imunoglobulina G, respectivamente. Após a aquisição das imagens com uma câmera de celular foi realizada uma análise por histogramas de cores e pela ferramenta multivariada de análise de componentes principais (PCA). Os resultados dessas análises permitiram diferenciar facilmente os grupos de amostras de soro de pacientes contaminados e não contaminados com o vírus da dengue. A fim de promover grupos carboxílicos na superfície do filme de poliéster, este foi modificado por duas metodologias: hidrólise alcalina e adsorção de um polímero. O ensaio de glicose foi realizado nos filmes modificados por ambas as metodologias e detectados por uma câmera de celular, e os limites de detecção encontrados foram 0,70 mM e 0,93 mM, para o filme com polímero e hidrolisado, respectivamente. Além disso, foi realizado nas microplacas o ensaio do biureto para a análise de proteínas totais em amostras de soro canino utilizando como sistema de detecção um scanner de bancada. O limite de detecção encontrado foi igual a 9,7 µM através da curva analítica variando de 0 a 200 µM de albumina.

A controlled assembly of natural beta-cyclodextrin modified Au NPs mediated by dopamine is demonstrated. Furthermore, a simple and sensitive colorimetric detection for dopamine is established by the concentration-dependent assembly.

[ES] La presente tesis doctoral titulada "Reconocimiento de neurotransmisores basado en nanopartículas de oro y de sílice mesoporosa para aplicaciones de detección y liberación controlada" es una tesis realizada por compendio de artículos la cual se centra en el diseño, preparación, caracterización y evaluación de distintos nanodispositivos para la detección colorimétrica de neurotransmisores y sistemas de liberación controlada que responden a neurotransmisores basados en nanopartículas de oro y nanopartículas de sílice mesoporosa, equipadas con ligandos orgánicos, efectores enzimáticos, puertas moleculares y especies cromofluorogénicas o medicamentos. En el primer capítulo se introduce una visión general de lo que son los neurotransmisores, sus principales características y el importante papel que éstos desempeñan en el funcionamiento de nuestro organismo. Además, se presenta una descripción general de las propiedades y potenciales aplicaciones de las nanopartículas de oro funcionalizadas con ligandos orgánicos como sistemas de detección y las nanopartículas mesoporosas de sílice funcionalizadas con puertas moleculares como sistemas de liberación controlada. A continuación, en el segundo capítulo se presentan los objetivos generales que son abordados en los siguientes capítulos experimentales. En el tercer capítulo, se presentan tres sistemas de detección colorimétrica de neurotransmisores basados en la agregación de nanopartículas de oro doblemente funcionalizadas con ligandos orgánicos. El primer sistema es un sensor capaz de detectar de forma selectiva el neurotransmisor serotonina, utilizando nanopartículas de oro funcionalizadas con ditio-bis(propionato de succinimidilo) y N-Acetil-L-Cisteína. El segundo sistema consiste en un sensor para la detección selectiva del neurotransmisor norepinefrina diseñado a partir de nanopartículas de oro funcionalizadas con 4-(liponiloxi)benzaldehído y ácido 4-mercato fenilborónico. El tercer sistema está compuesto por nanopartículas de oro funcionalizadas con 4-(liponiloxi)benzaldehído y N-Acetil-L-Cisteína, para la detección de normetanefrina, un importante biomarcador del tumor feocromocitoma. Todos estos sistemas se evalúan en medios competitivos como suero sanguíneo u orina. En el cuarto capítulo se muestran dos sistemas de liberación controlados enzimáticamente basados en la apertura de puertas moleculares. El primer sistema de liberación controlada responde a la presencia del neurotransmisor acetilcolina. En concreto, se utilizan nanopartículas de sílice mesoporosa funcionalizadas en su superficie con grupos de ácido fenilborónico y tapadas con la enzima acetilcolinesterasa mediante la formación de ésteres cíclicos de ácido fenilborónico entre las cadenas de oligosacáridos de la enzima y los grupos fenilborónicos de la superficie de las nanopartículas. En este caso la reacción enzimática produce ácido acético que da lugar a la hidrolisis de los ésteres borónicos, destapando los poros y liberando la carga contenida en el interior. Además, se evalúa la capacidad del dispositivo diseñado para liberar el citotóxico doxorubicina en células cancerosas en presencia de acetiltiocolina. El segundo sistema consiste en un nanodispositivo para la liberación controlada en respuesta al neurotransmisor L-glutamato. Para esto se utilizan nanopartículas tipo Janus de oro-sílice mesoporosa funcionalizadas con la enzima L-glutamato oxidasa en la parte del oro y con una puerta molecular autoinmolante de arilboronato en la superficie de la sílice. La liberación controlada se basa en el reconocimiento del L-glutamato por la enzima L-glutamato oxidasa y la posterior formación de peróxido de hidrogeno, que es la especie que induce la escisión de la puerta autoinmolante y la subsecuente apertura de los poros. Finalment es mostra que el sistema dissenyat és capaç d'alliberar un fàrmac citotòxic en cèl·lules de càncer de cervell després de detectar la presència de L-glutamat. / [CA] La present tesi doctoral titulada "Reconeixement de neurotransmissors basat en nanopartícules d'or i de sílice mesoporosa per a aplicacions de detecció i alliberació controlada" és una tesi realitzada per compendi d'articles la qual se centra en el disseny, preparació, caracterització i avaluació de diferents nanodispositius per a la detecció colorimètrica de neurotransmissors i sistemes d'alliberació controlada que responen a neurotransmissors basats en nanopartícules d'or i nanopartícules de sílice mesoporosa equipades amb lligands orgànics, efectors enzimàtics, portes moleculars i espècies cromofluorogénicos o medicaments. En el primer capítol s'introdueix una visió general del que són els neurotransmissors, les seves principals característiques i l'important paper que aquests tenen en el funcionament del nostre organisme. A més es presenta una descripció general de les propietats i potencials aplicacions de les nanopartícules d'or funcionalitzades amb lligands orgànics com a sistemes de detecció, i de les nanopartícules mesoporoses de sílice funcionalitzades amb portes moleculars com a sistemes d'alliberament controlat. A continuació, en el segon capítol es presenten els objectius generals que són abordats en els següents capítols experimentals. En el tercer capítol, es presenten tres sistemes de detecció colorimètrica de neurotransmissors basats en l'agregació de nanopartícules d'or doblement funcionalitzades amb lligands orgànics. El primer sistema és un sensor capaç de detectar de forma selectiva el neurotransmissor serotonina, utilitzant nanopartícules d'or funcionalitzades amb ditiobis (propionat de succinimidilo) i N acetil-L-cisteïna. El segon sistema consisteix en un sensor per a la detecció selectiva de neurotransmissor norepinefrina dissenyat a partir de nanopartícules d'or funcionalitzades amb 4- (liponiloxi) benzaldehid i Àcid 4-mercatofenilborònic. El tercer sistema està compost per nanopartícules d'or funcionalitzades amb 4- (liponiloxi) benzaldehid i N acetil-L-cisteïna, per a la detecció de normatanefrina un important biomarcador del tumor feocromocitoma. Tots aquests sistemes s'avaluen en mitjans competitius com sèrum sanguini u orina. En el quart capítol es mostren dos sistemes d'alliberament controlats enzimàticament basats en l'obertura de portes moleculars. El primer sistema d'alliberament controlat respon a la presència del neurotransmissor acetilcolina. En concret, s'utilitzen nanopartícules de sílice mesoporosa funcionalitzades en la seva superfície amb grups d'àcid fenilborònic i tapades amb l'enzim acetilcolina esterasa mitjançant la formació d'èsters cíclics d'àcid fenilborònic entre les cadenes d'oligosacàrids de l'enzim i els grups fenilborónicos de la superfície de les nanopartícules. En aquest cas, la reacció enzimàtica produeix àcid acètic que dóna lloc a la hidròlisi dels èsters borònics, destapant els porus i alliberant la càrrega continguda a l'interior. A més, s'avalua la capacitat del dispositiu dissenyat per alliberar el citotòxic doxorubicina en cèl·lules canceroses en presència d'acetiltiocolina. El segon sistema consisteix en un nanodispositiu per alliberació controlada en resposta al neurotransmissor L-glutamat, per al que s'utilitzen nanopartícules tipus Janus d'or-sílice mesoporosa funcionalitzades amb l'enzim L-glutamat oxidasa en la part de l'or i amb una porta molecular autoimmolant d'arilboronat a la superfície de la sílice. La alliberació controlada es basa en el reconeixement de L-glutamat per l'enzim L-glutamat oxidasa i la posterior formació de peròxid d'hidrogen, que és l'espècie que indueix l'escissió de la porta autoimmolant i la subseqüent obertura dels porus. Finalment es mostra que el sistema dissenyat és capaç d'alliberar un fàrmac citotòxic en cèl·lules de càncer de cervell després de detectar la presència de L-glutamat. / [EN] This doctoral thesis entitled "Neurotransmitters recognition based on gold and mesoporous silica nanoparticles for sensing and controlled release applications" it is a thesis carried out by compendium of articles, which is focused on the design, preparation, characterization and evaluation of nanodevices for the colorimetric sensing of neurotransmitters and controlled delivery systems responsive to neurotransmitters, based on gold nanoparticles and mesoporous silica nanoparticles equipped with organic ligands, enzymatic effectors, molecular gates and chromo-fluorogenic species or drugs. The first chapter introduces an overview about what neurotransmitters are, their main characteristics and the important role they play in the functioning of our body. In addition, a general description of the properties and potential applications of gold nanoparticles functionalized with organic ligands as detection systems and mesoporous silica nanoparticles functionalized with molecular gates as controlled delivery systems is presented. In the second chapter, the general objectives that are addressed in the following experimental chapters are presented. In the third chapter, three colorimetric detection systems of neurotransmitters based on the aggregation of gold nanoparticles doubly functionalized with organic ligands are presented. The first system is a sensor capable of selectively detecting the neurotransmitter serotonin, using gold nanoparticles functionalized with dithio-bis(succinimidyl propionate) and N acetyl-L-cysteine. The second system consists of a sensor for the selective detection of the neurotransmitter norepinephrine designed from gold nanoparticles functionalized with 4- (liponyloxy)benzaldehyde and 4-mercaptophenylboronic acid. The third system is composed of gold nanoparticles functionalized with 4-(liponyloxy)benzaldehyde and N-Acetyl-L-Cysteine, for the detection of normetanephrine, an important biomarker of the pheochromocytoma tumor. All these systems are evaluated in competitive media such as blood serum or urine. In the fourth chapter, two enzymatic controlled delivery systems based on the opening of molecular gates are developed. The first controlled delivery system responds to the presence of the neurotransmitter acetylcholine. Specifically, it consists of mesoporous silica nanoparticles functionalized on their surface with phenylboronic acid groups and capped with the enzyme acetylcholinesterase, via the formation of cyclic phenylboronic acid esters between the oligosaccharide chains of the enzyme and the phenylboronic groups on the nanoparticles surface. In this case, the enzymatic reaction produces acetic acid that induces the hydrolysis of the boronic esters, uncapping the pores and releasing the entrapped payload. In addition, the ability of the nanodevice to release the cytotoxic doxorubicin in cancer cells in the presence of acetylthiocholine is evaluated. The second delivery system consists of a nanodevice responsive to the neurotransmitter L-glutamate. It is based on Janus gold-silica mesoporous nanoparticles functionalized with the enzyme L-glutamate oxidase in the gold part and with a self-immolative arylboronate molecular gate on the surface of the silica. Controlled delivery is based on the recognition of L-glutamate by the enzyme L-glutamate oxidase and the subsequent formation of hydrogen peroxide, which results in the cleavage of the self-immolative gate and the uncapping of the pores. Finally, it is shown that the designed system is capable of releasing a cytotoxic drug in brain cancer cells after detecting the presence of L-glutamate. / The authors acknowledge financial support from the Spanish Government (Projects MAT2015-64139-C4-1-R, MAT2015-64139-C4-4-R (MINECO/FEDER) and Project AGL2015-70235-C2-2-R) and the Generalitat Valenciana (Projects PROMETEOII/2014/047 and PROMETEO/2018/024). T. Godoy-Reyes is grateful to Generalitat Valenciana for her Santiago Grisolía fellowship. A. García-Fernández is grateful to the Spanish Government for her FPU fellowship. A. Llopis-Lorente thanks “La Caixa” Foundation for his PhD grant. SCSIE (Universitat de València) is gratefully acknowledged for all the equipment employed. / Godoy Reyes, TM. (2020). Neurotransmitters recognition based on gold nanoparticles and mesoporous silica nanoparticles for sensing and controlled release applications [Tesis doctoral]. Universitat Politècnica de València. https://doi.org/10.4995/Thesis/10251/158420 / TESIS