<p>The human coronavirus NL63 was discovered in 2004 by a team of researchers in Amsterdam. Since its discovery it has been shown to have worldwide spread and affects mainly children, aged 0-5 years old, the immunocompromised and the elderly. Infection with HCoV-NL63 commonly results in mild upper respiratory tract infections and presents as the common cold, with symptoms including fever, cough, sore throat and rhinorrhoea. Lower respiratory tract findings are less common but may develop into more serious complications including bronchiolitis, pneumonia and croup. The primary function of the HCoV-NL63 nucleocapsid (N) protein is the formation of theprotective ribonucleocapsid core. For this particle to assemble, the N-protein undergoes N-N dimerization and then interacts with viral RNA. Besides the primary structural role of the Nprotein, it is also understood to be involved in viral RNA transcription, translation and replication, including several other physiological functions. The N-protein is also highly antigenic and elicits a strong immune response in infected patients. For this reason the N-protein may serve as a target for the development of diagnostic assays. We have used bioinformatic analysis to analyze the HCoV-NL63 N-protein and compared it to coronavirus N-homologues. This bioinformatic analysis provided the data to generate recombinant clones for expression in a bacterial system. We constructed recombinant clones of the N-protein of SARS-CoV and HCoV-NL63 and synthesized truncated clones corresponding to the N- and C-terminal of the HCoV-NL63 N-protein. These heterologously expressed proteins will serve the basis for several post-expression studies including characterizing the immunogenic epitope of the N-protein as well identifying any antibody crossreactivity between coronavirus species.</p>

<p>The human coronavirus NL63 was discovered in 2004 by a team of researchers in Amsterdam. Since its discovery it has been shown to have worldwide spread and affects mainly children, aged 0-5 years old, the immunocompromised and the elderly. Infection with HCoV-NL63 commonly results in mild upper respiratory tract infections and presents as the common cold, with symptoms including fever, cough, sore throat and rhinorrhoea. Lower respiratory tract findings are less common but may develop into more serious complications including bronchiolitis, pneumonia and croup. The primary function of the HCoV-NL63 nucleocapsid (N) protein is the formation of theprotective ribonucleocapsid core. For this particle to assemble, the N-protein undergoes N-N dimerization and then interacts with viral RNA. Besides the primary structural role of the Nprotein, it is also understood to be involved in viral RNA transcription, translation and replication, including several other physiological functions. The N-protein is also highly antigenic and elicits a strong immune response in infected patients. For this reason the N-protein may serve as a target for the development of diagnostic assays. We have used bioinformatic analysis to analyze the HCoV-NL63 N-protein and compared it to coronavirus N-homologues. This bioinformatic analysis provided the data to generate recombinant clones for expression in a bacterial system. We constructed recombinant clones of the N-protein of SARS-CoV and HCoV-NL63 and synthesized truncated clones corresponding to the N- and C-terminal of the HCoV-NL63 N-protein. These heterologously expressed proteins will serve the basis for several post-expression studies including characterizing the immunogenic epitope of the N-protein as well identifying any antibody crossreactivity between coronavirus species.</p>

Orientador: Hélio José Montassier / Banca: Camillo Del Cistia Andrade / Banca: Janete Apparecida Desidério Sena. / Resumo: Anticorpos monoclonais se constituem na base de vários testes usados na detecção e na identificação de antígenos. Nesse contexto, tais imuno-reagentes têm sido extensivamente empregados na identificação de estirpes virais envolvidas na etiologia de surtos de bronquite infecciosa a campo, permitindo o aperfeiçoamento das técnicas de detecção e caracterização antigênica do vírus da bronquite infecciosa das galinhas (VBI). No presente estudo, uma biblioteca de fragmentos de anticorpos de galinha originalmente preparada por "phage display" contra a estirpe vacinal (H120) do VBI, foi usada para a seleção de fragmentos de anticorpos recombinantes com reatividade cruzada para as estirpes heterólogas IBVPR01, IBVPR05, isoladas de surtos a campo no Brasil e SE-17, isolada nos Estados Unidos. Após três ciclos de "panning", foi identificado pelo ELISA um conjunto de 15 anticorpos scFv expressos em fagos e com reatividade cruzada para essas mesmas estirpes do VBI. A análise por Western-blotting revelou que três desses clones apresentavam fagos expressando fragmentos de anticorpos monoclonais com reatividade cruzada para a nucleoproteína N das três estirpes do VBI e também para a forma recombinante dessa nucleoproteína derivada da estirpe M41. Concluindo, os fragmentos de anticorpos monoclonais recombinantes scFv-N produzido em fagos interagem com um epítopo mais conservado da proteína N do VBI e apresentam um grande potencial para utilização na detecção e no diagnóstico direto desse vírus e no estudo de evolução de variantes desse vírus. / Abstract: Monoclonal antibodies are the basis of various techniques used for antigen detection or characterization, and their use is specially recommended for the identification of viral strains involved in the etiology of outbreaks of infectious bronchitis, because these antibodies are homogeneous, highly specific and fully characterized, allowing the improvement of detection of immunological techniques and antigenic characterization of avian infectious bronchitis virus strains (IBV). We used a phage display library prepared previously against the IBV vaccine strain (H120) for the selection of new scFv antibody fragments reacting with heterologous IBV strains isolated from outbreaks in Brazil (IBVPR01, IBVPR05) and USA (SE-17). After three cycles of panning a set of 15 scFv antibodies was expressed in phages and exhibited crossreaction in ELISA with these three viral strains. Western-blotting analysis showed that three of this clone set were expressing scFv specific for the nucleoprotein of these IBV strains, as well as to the recombinant form of this protein derived from M41 strain of IBV. In conclusion, the recombinant fragments of monoclonal antibodies expressed by phage-display technique have a great potential for future use in immunodiagnostic techniques and study the evolution of variant strains of this virus. / Mestre

Infectious bovine keratoconjunctivitis (IBK) is the main ocular disease of cattle. Highly contagious, it is responsible for significant economic losses of livestock worldwide. Moraxella bovis is recognized as the primary agent of the disease in cattle. However, the occurrence of other similar species, including M. ovis and M. bovoculi, recently described, have been common in outbreaks of the disease and are suspected to be causally related to the limited success of preventive measures, especially the use of bacterins containing only strains of M. bovis. This dissertation describes the antigenic characterization of M. bovis, M. bovoculi and M. ovis strains and a commercial vaccine by cross-reactivity using flow cytometry analysis and identification of immunodominant conserved antigens by Western blotting. Antisera against strains of the three species were obtained from immunization of New Zealand rabbits and challenged before a panel of strains isolated from cattle and sheep clinically affected by the disease between 1983 and 2013 as well as reference strains of each species. Field strains of M. bovoculi (Mbv2 and Mbv3) recognized satisfactorily all heterologous strains. However, Mbv3 (M. bovoculi), Mov2 (M. ovis) and Mov3 (M. ovis) strains stood out as the most intense recognition strains of their respective species and suggest that species-specific antigens play an important role in the host immune response. The association of reactivity percentage with the antigenic profiles, evidenced by Western blotting analysis, indicates that the immune response induced by Moraxella spp. appears to be mediated by multiple surface antigens of which many are shared between the three species. Among 32 different proteins identified, 22 (68.7%) were recognized by at least one antiserum in the protein extracts of all strains analyzed by Western blotting. Our study suggests (1) the selection and combination of M. bovis, M. bovoculi and M. ovis strains to be used in the composition of antigenic unit vaccines as IBK control strategy and (2) the use of flow cytometry as the most appropriate methodology for this selection. / Ceratoconjuntivite infecciosa bovina (CIB) é a principal doença ocular de bovinos. Altamente contagiosa, é responsável por significativas perdas econômicas para a pecuária no mundo inteiro. Moraxella bovis é, reconhecidamente, o agente primário da enfermidade em bovinos. Contudo, a ocorrência de outras espécies do gênero, incluindo M. ovis e M. bovoculi, recentemente descrita, têm sido comuns em surtos da doença e são suspeitas de serem causalmente associadas ao sucesso limitado de medidas preventivas, sobretudo do uso de bacterinas contendo apenas cepas de M. bovis. Esta dissertação descreve a caracterização antigênica de cepas de M. bovis, M. bovoculi e M. ovis e de uma vacina comercial através da análise de reatividade cruzada por citometria de fluxo e da identificação de antígenos imunodominantes e conservados através de Western blotting. Antissoros contra cepas das três espécies foram obtidos a partir da imunização de coelhos Nova Zelândia e desafiados frente a um painel de cepas isoladas de bovinos e ovinos clinicamente acometidos pela doença entre 1983 e 2013 assim como cepas de referência de cada espécie. Cepas de campo de M. bovoculi (Mbv2 e Mbv3) reconheceram satisfatoriamente todas as cepas heterólogas. Contudo, as cepas Mbv3 (M. bovoculi), Mov2 (M. ovis) e Mov3 (M. ovis) destacaram-se pela maior intensidade de reconhecimento de cepas de suas respectivas espécies e sugerem que antígenos espécie-específicos desempenham importante papel na resposta imune do hospedeiro. A associação dos percentuais de reatividade aos perfis antigênicos evidenciados através da análise por western blotting indica que a resposta imune induzida por Moraxella spp. parece ser mediada por múltiplos antígenos de superfície dos quais, diversos são compartilhados entre as três espécies. Entre 32 diferentes proteínas detectadas, 22 (68,7%) foram reconhecidas por pelo menos um antissoro nos extratos protéicos de todas as cepas analisadas por western blotting. Nosso estudo sugere a seleção e combinação de cepas de M. bovis, M. bovoculi e M. ovis circulantes para composição da unidade antigênica de vacinas como estratégia de controle de IBK e a utilização de citometria de fluxo como metodologia mais adequada para esta seleção.

Magister Scientiae (Medical Bioscience) - MSc(MBS) / The human coronavirus NL63 was discovered in 2004 by a team of researchers in Amsterdam. Since its discovery it has been shown to have worldwide spread and affects mainly children, aged 0-5 years old, the immunocompromised and the elderly. Infection with HCoV-NL63 commonly results in mild upper respiratory tract infections and presents as the common cold, with symptoms including fever, cough, sore throat and rhinorrhoea. Lower respiratory tract findings are less common but may develop into more serious complications including bronchiolitis, pneumonia and croup. The primary function of the HCoV-NL63 nucleocapsid (N) protein is the formation of theprotective ribonucleocapsid core. For this particle to assemble, the N-protein undergoes N-N dimerization and then interacts with viral RNA. Besides the primary structural role of the Nprotein, it is also understood to be involved in viral RNA transcription, translation and replication, including several other physiological functions. The N-protein is also highly antigenic and elicits a strong immune response in infected patients. For this reason the N-protein may serve as a target for the development of diagnostic assays. We have used bioinformatic analysis to analyze the HCoV-NL63 N-protein and compared it to coronavirus N-homologues. This bioinformatic analysis provided the data to generate recombinant clones for expression in a bacterial system. We constructed recombinant clones of the N-protein of SARS-CoV and HCoV-NL63 and synthesized truncated clones corresponding to the N- and C-terminal of the HCoV-NL63 N-protein. These heterologously expressed proteins will serve the basis for several post-expression studies including characterizing the immunogenic epitope of the N-protein as well identifying any antibody crossreactivity between coronavirus species. / South Africa

While a decrease of wild felid population has led to disruption of conservation programme, recent studies have shown the importance of immune regulation for determining health outcomes and co-infection. Immunoglobulin G is important for detecting and evaluating responses to infectious diseases and vaccination. But, there is limited information on felid immunoglobulins and their role for functional immunity. This study aimed at isolating and characterizing lion’s immunoglobulin G. Lions’ sera (n = 68) were processed using the MagReSyn® magnetic beads and the final protein concentration was determined using the Xpose™ Trinean Spectrophotometer. The cross-reactivity of goat anti-cat immunoglobulin with sera of lions and other species was analysed using ELISA. High cross-reactivity was observed in lions ranging from 87.7 to 100%, and low reactivity with rhino (22.4%) followed by chicken (0.01%). The protein concentration from purified sera yielded 39.09 mg/ml. Molecular weight of lion IgG 150-160 kDa was detected with both chains at 54-56 kDa and 24-26 kDa on SDS PAGE. These results indicate a potential aid in developing serological tools to monitor exposure to micro-organisms of lions. / Agriculture and  Animal Health / M. Sc. (Agriculture)

Os tripanosomatídeos inferiores, que infectam plantas e insetos, apresentam propriedades bioquímicas e moleculares similares a Leishmania sp. e Trypanosoma cruzi. Similaridades antigênicas entre estes parasitas são conhecidas à muito tempo, mas somente alguns poucos estudos comparativos sobre a imunorreatividade humoral cruzada foram descritos. No presente trabalho nós analisamos a imunorreatividade cruzada de extratos antigênicos totais de oito tripanosomatídeos inferiores por ELISA, com soros de humanos e cães infectados com T. cruzi e Leishmania sp. Segundo as positividades e dados de reatividade média para ELISA os tripanosomatídeos inferiores foram divididos em dois grupos. ELISA-G1 compreendeu 4 parasitas para os quais se obtiveram 100% de positividade e elevadas médias de absorbância, similar aos dados obtidos para L. chagasi para hospedeiros humanos e cães. Nos casos humanos, soros de pacientes chagásicos crônicos apresentaram 100% de positividade somente para o ELISA com T. cruzi, sem diferenças entre os tripanosomatídeos inferiores. Por outro lado amostras de doenças não relacionadas apresentaram baixa reatividade cruzada com os tripanosomatídeos inferiores. Apesar da sua posição taxonômica em várias sessões e sua antiga divergência estes resultados mostraram semelhança antigênica entre os tripanosomatídeos inferiores e os patogênicos, e podem ser uma fonte alternativa de antígenos para a detecção de anticorpos principalmente em casos de leishmaniose visceral. / \"Lower trypanosomatids\", that infect plant and insect, present biochemical and molecular similarities to Leishmania sp. and Trypanosoma cruzi. Antigenic similarities between those parasites are known for a long time, but only few comparative investigations about immune humoral cross-reaction were described. In the current work we analyze the cross-immunoreactivity of crude extract from eight lower trypanosomatids by ELISA, with human and dog host samples infected with T. cruzi and Leishmania sp. ELISA positivity and data of mean title of human or dog visceral leishmaniasis cases, the lower trypanosomatids were divided in two groups. ELISA-G1 comprised by 4 parasites resulted in 100% positivity and high mean of absorbance, similar data to those obtained with L. chagasi, with human or dog hosts. In human cases, Chagas disease chronic cases showed 100% positive only with ELISA performed with T. cruzi, with no differences among lower trypanosomatids. Otherwise samples with other non correlated disease presented low cross-reaction with lower trypanososmatids. In spite of, their taxonomic position in various sections and their old divergence these results showed a strong antigenic similarity between pathogenic and lower trypanosomatids, and could be an alternative source of antigen for the detection of antibodies against host mainly with visceral leishmaniasis cases.

Immunoassays basieren auf der Anwendung von Antikörpern, welche selektiv den zu messenden Analyten binden. Die Richtigkeit der erhaltenen Ergebnisse hängt maßgeblich von der Selektivität der Antikörper ab und kann durch Interferenzen gestört werden. In dieser Arbeit wurde eine Methode entwickelt, bei der die Probe mittels Hochleistungsflüssigkeitschromatographie (LC) in Fraktionen aufgetrennt wird und diese Fraktionen anschließend mittels Enzyme-linked Immunosorbent Assay (ELISA) vermessen werden. Dieses Verfahren wurde als LC-ELISA bezeichnet. Das erhaltene Profil aus im ELISA gemessener Analytkonzentration in Abhängigkeit von der Elutionszeit wurde als LC-ELISAgramm bezeichnet und bietet die Möglichkeit, Interferenzen zu erkennen, welche beim ELISA unentdeckt bleiben. Als Modellanalyten für die zu untersuchenden ELISAs dienten Sulfamethoxazol (SMX), Carbamazepin (CBZ) und Estron (E1). Dabei wurden verschiedene Umweltmatrices wie Oberflächenwasser und Abwässer mit dem jeweiligen ELISA vermessen. Es wurde ein Ansatz zur Unterscheidung von spezifischen und unspezifischen Interferenzen in Umweltproben aufgezeigt. Durch diesen Ansatz und Anwendung der sauren Hydrolyse der Probe war es möglich, einen bisher unbekannten SMX-Metaboliten zu detektieren und dessen wahrscheinliche Kreuzreaktivität mit 460 ± 150 % abzuschätzen. Es wurde zudem ein neuer Tracer in einer linearen 13-Stufen-Synthese entwickelt, wobei neuartig die Konjugation der Peroxidase an der N1-Position des SMX erfolgte. / Immunoassays are based on the use of antibodies that selectively bind the analyte. The trueness of the results obtained depends to a great extent on the selectivity of the antibodies and can be affected by interferences. In this study, a method was developed in which the sample is separated into fractions by using high-performance liquid chromatography (LC) and these fractions are measured using an enzyme-linked immunosorbent assay (ELISA). This method was referred to as LC-ELISA. The profile obtained from the measured analyte concentration by ELISA as a function of the elution time was referred to as LC-ELISAgram and offers the possibility to detect interferences which otherwise remain undetected during the ELISA. Sulfamethoxazole (SMX), carbamazepine (CBZ) and estrone (E1) were used as model analytes for the ELISA and LC-ELISA measurements. Various environmental matrices such as surface water and wastewater were examined for their interference in the respective ELISA. The good quantification properties of the validated LC-ELISA have been used to demonstrate an approach to distinguish between specific and non-specific interferences from environmental samples. By this approach and application of acidic hydrolysis of the sample, it was possible to detect a previously unknown metabolite of SMX and estimate its cross-reactivity to probably 460 ± 150%. Furthermore, a new tracer was developed in a linear 13-step synthesis, which resulted in the novel conjugation of the peroxidase at the N1-position of SMX. The new hapten was also used for the synthesis of a novel immunogen.

Klinische, epidemiologische und experimentelle Daten deuten darauf hin, dass Autoimmunkrankheiten wie z.B. rheumatoide Arthritis, multiple Sklerose oder Typ I Diabetes durch Infektionen ausgelöst oder verschlimmert werden können. Bis heute ist jedoch nicht bekannt, welche molekularen und zellulären Mechanismen den Zusammenhang zwischen Infektion und Autoimmunität vermitteln. Eine Hypothese, die diesen Zusammenhang zu erklären versucht, ist die Hypothese der molekularen Mimikry. Dieser Hypothese zufolge sind kreuzreaktive Lymphozyten, die sowohl Selbst- als auch Fremdantigene erkennen, für die Induktion von Autoimmunität verantwortlich. Die Hypothese der molekularen Mimikry erklärt die Kreuzreaktivität von Lymphozyten durch Sequenzhomologie oder Identität von Selbst- und Fremdantigenen. Wir haben diese Hypothese an zwei Modellen, der chronischen Lyme Arthritis und einem Maus Modell der multiplen Sklerose, getestet und dabei festgestellt, dass Kreuzreaktivität von Lymphozyten weitaus häufiger ist als bis vor kurzem noch vermutet wurde. Wir konnten weiterhin zeigen, dass nicht die Primärstruktur sondern definierbare strukturelle Motive die Ursache für die Kreuzerkennung von Selbst- und Fremdpeptiden sind, und das Kreuzreaktivität in den seltensten Fällen von pathogenetischer Relevanz ist. Die Vorstellung, immunologische Kreuzreaktivität zwischen einem definierten mikrobiellen Antigen und einem definierten Selbstantigen sei für die Pathogenese von Autoimmunkrankheiten verantwortlich, ist also zu einfach. Der zweite Schwerpunkt dieser Arbeit ist die immunologische Analyse eines von uns charakterisierten Th2-spezifisch exprimierten Moleküls, T1/ST2. Wir konnten zeigen, dass T1/ST2 auf Th2, nicht jedoch Th1-Zellen exprimiert wird; dass die Expression von T1/ST2 ex vivo die Lokalisation aktueller Th2-Antworten widerspiegelt; und dass T1/ST2 von funktioneller Bedeutung für die Th2 Zellen ist: Kreuzvernetzung des T1/ST2 Moleküls durch einen T1/ST2-spezifischen monoklonalen Antikörper induziert Proliferation und die Produktion von Typ 2 Zytokinen. In vivo läßt sich durch Applikation des löslichen Antikörpers gegen T1/ST2 die pathogene Th2-Immunantwort im Mausmodell von Asthma modulieren. T1/ST2 ist also ein Kandidat für die gezielte immunmodulatorische Therapie Th2-dominierter Erkrankungen wie Asthma und Allergie. / Clinical, epidemiological, and experimental data suggest that infections can sometimes trigger or exacerbate autoimmune diseases such as multiple sclerosis, type I diabetes, or rheumatoid arthritis. To date, the molecular and cellular mechanisms leading from infection to autoimmunity have not been defined. The molecular mimicry hypothesis proposes that crossreactive lymphocytes that recognize both self- and microbial antigens are key factors in the pathogenesis of autoimmunity. According to the molecular mimicry hypothesis, sequence identity or marked sequence similarity between self- and microbial antigens is the cause of such crossreactivity. We have examined the molecular mimicry hypothesis systematically in two different models: treatment-resistant Lyme arthritis and experimental autoimmune encephalitis (EAE). The major findings were: i) crossreactivity at the level of peptide recognition by T cells is far more frequent than previously expected; ii) structural criteria rather than sequence similarity determine cross-recognition; iii) immunoregulatory mechanisms normally prevent pathogenic effects mediated by crossreactive lymphocytes. Thus, the idea that crossrecognition of a defined microbial peptide and a particular self-peptide would explain autoimmunity is most likely too simple. The other major topic of this work was the immunological analysis of T1/ST2, a Th2-specific molecule that we characterized. Here, we could show that T1/ST2 is expressed on Th2 but not Th1 cells. Furthermore, T1/ST2 expression can be used to identify sites of ongoing Th2 reactions directly ex vivo. Most importantly, T1/ST2 is important for Th2 effector functions: crosslinking of T1/ST2 via a T1/ST2-specific monoclonal antibody induces proliferation and type 2-cytokine production. In vivo, administration of the soluble antibody against T1/ST2 ameliorates the immunological parameters of bronchial hyperreactivity in a murine model of asthma. Thus, T1/ST2 is a candidate target for therapeutic immunomodulation of diseases such as allergy and asthma.

In der Arbeit wurde die Rolle von Bakterien für das Entstehen von Autoimmunität untersucht. Insbesondere wurde untersucht, inwieweit Bakterien entweder spezifisch (über "Kreuzreaktivität") oder antigenunabhängig (über "Bystander-Aktivierung") eine Aktivierung von autoreaktiven CD4+- T-Zellen induzieren können. Es konnte gezeigt werden, dass es bei dem untersuchten, MBP-spezifischen T-Zellrezeptor multiple, natürlich vorkommende, kreuzreaktive Peptide mikrobiellen Ursprungs gibt, die eine Aktivierung der T-Zellen hervorrufen und in vivo experimentelle autoimmune Enzephalomyelitis (EAE) induzieren können. Weiterhin wurde untersucht, inwieweit Lipopolysaccharid (LPS) als unspezifischer Aktivator des Immunsystems eine Aktivierung der autoreaktiven T-Zellen in vitro hervorrufen kann und inwieweit in vivo EAE durch LPS hervorgerufen werden kann. Es wurde gezeigt, dass LPS in vitro einen kleinen Anteil der CD4+ - T-Zellen aktiviert. Wurden den transgenen T+alpha- -Mäusen LPS appliziert, erkrankten diese an EAE. Somit gibt es sowohl in vitro als auch in vivo in den T+alpha- -Mäusen Hinweise für eine Relevanz von "Bystander-Aktivierung". Abschließend wurde diskutiert, inwieweit entweder "Kreuzreaktivität" oder "Bystander-Aktivierung" als Auslöser für Autoimmunität unter physiologischen Bedingungen in Frage kommt. Aufgrund der in dieser Arbeit gezeigten Ergebnisse wurde postuliert, dass keine der beiden Mechanismen alleiniger Auslöser sei, da es aufgrund der Häufigkeit von Infektionen, kreuzreaktiven Peptiden und des Vorkommens von autoreaktiven T-Zellen auch in gesunden Individuen ansonsten sehr viel häufiger zu Autoimmunität kommen müsste. Unter bestimmten Bedingungen könnte die Aktivierung von T-Zellen über Kreuzreaktivität oder über "Bystander-Aktivierung" Autoimmunität auslösen oder verstärken, wenn bereits andere Mechanismen des Immubnsystems, die Autoimmunität verhindern, versagt haben. / In this thesis the role of bacteria for the induction of autoimmunity was investigated. In detail, it was examined whether bacteria are able to activate autoreactive CD4+-T-cells antigen-specific ("cross-reactivity") or antigen-unspecific ("bystander-activation"). It was shown that the examined transgenic MBP-peptide specific T-cell-receptor recognized many natural occurring cross-reactive peptides of microbial origin, which induced an activation of the T-cells in vitro and which could induce autoimmune encephalomyelitis (EAE) in the T-cell-receptor transgenic mice in vivo. Furthermore, it was examined, whether lipopolysaccharide (LPS) as activator of the innate immune system could induce an unspecific activation of the autoreactive T-cells in vitro and whether administration of LPS in the transgenic mice could induce EAE in vivo. It was shown that LPS activates a small percentage of CD4+ - T-cells. Application of LPS to the transgenic T+alpha- mice induced EAE. Therefore, the role of bystander-activation was indicated in vitro and in vivo. Finally, it was discussed, whether either cross-reactivity or bystander-activation could be sufficient for inducing autoimmunity under physiologic conditions. Due to the results presented in this work, it is postulated that none of the both mechanisms could be inductor of autoimmunity alone. If one of these mechanisms was sufficient, autoimmunity in humans should be a frequent event, because infections and autoreactive T cells are both findings which occur in healthy humans very often. However, under certain conditions either cross-reactivity or bystander-activation could trigger or exacerbate autoimmunity, when other mechanisms which inhibit autoimmunity have failed.