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Analyse des variantes d'épissage de l'Interleukine-4 dans l'étude de la réponse immunitaire / Analysis of Interleukine-4 alternative splice variants in the study of the immune responseHauvespre, Caroline 14 December 2012 (has links)
L’interleukine-4, cytokine clef du système immunitaire, est l’une des composantesprincipales de la réponse humorale. Un variant d’épissage de l’IL-4 humaine, nommé IL-4δ2est caractérisé par une délétion de l’exon 2. L’expression d’isoformes de cytokines peut êtrespécifique d’un tissu, d’un stimulus ou d’un état pathologique. Un intérêt particulier leur estaccordé car leur présence ou leur niveau d’expression peut en faire des biomarqueurspotentiels de certains stades pathologiques. Ainsi, ce projet a été consacré à l’étude del’expression et de la fonctionnalité de l’IL-4δ2 dans le but de mieux caractériser son rôle ausein de la réponse immunitaire.Une étude cinétique des niveaux d’expression de l’interleukine-4 et de son variant,réalisée chez des donneurs sains, montre une expression de ces deux variants dépendante dudonneur. L’étude a été poursuivie pour déterminer le type cellulaire capable de produire l’IL-4δ2. Ainsi, l’IL-4δ2 ne semble pas être exprimée par les cellules CD4+ et CD8+ à l’inversedes granulocytes.La fonction agoniste ou antagoniste à l’IL-4, de l’isoforme δ2, sujette à controverse, ajustifié une exploration de sa fonctionnalité. Nous avons ainsi évalué la capacité de l’IL-4δ2 àactiver les voies de signalisation de l’IL-4. Une absence d’activation de mécanismescellulaires similaires à l’IL-4 nous suggère un potentiel rôle inhibiteur de ce variant.Au cours du travail sur l’IL-4δ2, un nouveau variant d’épissage de l’IL-4 a étédécouvert chez l’homme. Par épissage alternatif, un nouvel exon est retenu dans l’ARNm dece variant. L’étude de celui-ci nous a permis de proposer, pour cet ARNm, une dégradationpar le mécanisme de Nonsens-Mediated Decay (NMD). Cette découverte apporte un niveausupplémentaire dans la compréhension du système de régulation de l’IL-4.Ce sujet d’étude apporte de nouveaux éléments quant à l’expression et la fonction del’IL-4δ2. De plus, l’identification d’un nouveau variant d’épissage enrichit la connaissancesur la régulation de l’expression du gène de l’Il4. D’une façon générale, la prise en comptedes variants d’épissage des cytokines devrait permettre de mieux caractériser la réponseimmunitaire, essentielle dans un contexte de vaccinologie. / Interleukin-4 (IL-4) is a key cytokine driving the humoral component of the immunesystem. An alternative splice variant of human IL-4, deleted of the second exon and so calledIL-4δ2 has been described. The expression of alternative splice variants is known to be tissuespecific,dependent of a particular stimulus or a pathological state. Their potential asbiomarkers is of increasing interest. Thus, this project was dedicated to the functionality ofIL-4δ2, improving characterization of the immune response.A kinetic study on the expression levels of IL-4 and its spliced variant, conducted onhealthy donors has shown to be donor-specific. The determination of the cell type able toproduce IL-4δ2 indicated that, CD4+ and CD8+ cells were not expressing the isoform, incontrast to granulocytes.The controversial agonist or antagonist function of IL-4δ2 was discussed throughfunctionality. The ability of IL-4δ2 to induce the signaling pathways of IL-4 was evaluated.An absence of similar profile of activation to IL-4 suggests a potential inhibitory role of IL-4δ2.During the study on IL-4δ2, a new alternatively spliced variant of IL-4 was discoveredin humans. Upon splicing, a new exon is retained in this variant. Its functional outcome as asubstrate for Nonsens-Mediated Decay (NMD) allowed bringing a new insight in thecomprehension of IL-4 regulatory system.Our work brought novel elements in the expression and functionality of IL-4δ2.Moreover, the discovery of a new alternatively spliced variant enriched the knowledge on theregulation pathways of Il4 gene expression. A focus on alternatively spliced variants ofcytokines is likely to clarify the complex regulation of the immune system.
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Klinisches Erscheinungsbild und funktionelle Charakterisierung eines Patienten mit einer heterozygoten Exon 6 Deletion im IGF1RHarmel, Eva-Maria Sophia 04 February 2015 (has links)
Hintergrund: Der Insulin-like growth factor receptor (IGF1R) spielt eine zentrale Rolle bei Wachstumsprozessen. Heterozygote IGF1R-Mutationen führen durch eine partielle IGF1-Resistenz zu Kleinwuchs.
Methoden: Auxologische und endokrinologische Daten des Patienten wurden erhoben. Anhand von Fibroblasten wurde die IGF1R-Deletion charakterisiert und die Auswirkungen auf die mRNA- und Protein-Expression sowie die Signaltransduktion untersucht.
Ergebnisse: Der Junge, der eine heterozygote Exon 6 Deletion im IGF1R – durch Alu-Rekombination verursacht – und eine heterozygote SHOX-Variante (p.Met240Ile) in seinem Genom vereint, kam ‚appropriate for gestational age‘ zur Welt, entwickelte aber postnatal eine Wachstumsretardierung. Die Endokrinologischen Daten waren unauffällig. Der Patient zeigt keine Stigmata, die bei anderen IGF1- oder SHOX-Mutationsträgern beschrieben wurden. Durch Nonsense-Mediated mRNA Decay kommt es zu einer Dosisreduktion der IGF1-Rezeptoren und einer entsprechenden verminderten Aktivierung der Rezeptoren, nicht aber des Signalwegs.
Zusammenfassung: Der Patient trägt eine bisher unbeschrieben heterozygote IGF1R-Deletion, die zu Kleinwuchs führt. Ursächlich dafür ist eine durch die Mutation verursachte Dosisreduktion der IGF1-Rezeptoren.:Inhaltsverzeichnis
I Abkürzungsverzeichnis - 4 -
1 Bibliographische Beschreibung - 7 -
1.1 Referat - 7 -
2 Einleitung und Hintergrund - 9 -
2.1 Das menschliche Wachstum - 9 -
2.2 Das IGF-System als Regulator von Wachstum u. Entwicklung - 10 -
2.3 Der IGF1-Rezeptor - 11 -
2.4 Formen des Kleinwuchses - 12 -
2.5 IGF1R-Mutationen - 13 -
2.6 SHOX-Defizienz - 14 -
2.7 Der Nonsense-Mediated mRNA Decay - 15 -
2.8 Alu-Elemente - 16 -
2.9 Überleitung - 17 -
4 Originalpublikation - 18 -
5 Zusammenfassung der Arbeit - 31 -
5.1 Patientenbeschreibung - 32 -
5.2 Experimentelle Untersuchungen - 33 -
5.3 Interpretation - 35 -
5.4 Ausblick - 37 -
6 Literaturverzeichnis - 39 -
III Curriculum vitae - 50 -
IV Danksagung - 52 -
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Shihua_Huang_thesis_Dec_2022_submit.pdfShihua Huang (14226611) 08 December 2022 (has links)
<p>The ability of the Mu2e experiment to probe, or discover BSM physics in direct CLFV μ+ and π+ decay modes is estimated.</p>
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An investigation into the effects and implications of gamma radiation on organic matter, crude oil, and hydrocarbon generationKelly, Logan January 1900 (has links)
Master of Science / Department of Geology / Sambhudas Chaudhuri and Matthew Totten / The current model of hydrocarbon generation involves the thermogenic maturation of organic material as a consequence of burial. This process only considers energy generated from temperature increase due to burial. The majority of organic rich source beds contain high concentrations of radioactive elements, hence the energy produced from radioactive decay of these elements should be evaluated as well. Previous experiments show that α-particle bombardment can result in the generation of hydrocarbons from oleic acid. This study investigates the effects of γ-rays in a natural petroleum generating system. In order to determine the effects of γ-rays, experiments were conducted using cesium-137 as the γ-ray source at the KSU nuclear facilities to irradiate crude oil and organic material commonly found in petroleum systems. The samples were then analyzed using Fourier Transform Infrared Spectroscopy (FTIR) and Rock-Eval pyrolysis to determine changes in the samples. The FTIR results demonstrated that γ-radiation can cause the lengthening and/or shortening of hydrocarbon chains in crude oils, the dissociation of brine (H2O (aq)), the production of free radicals, and the production of various gases. These changes that come from γ-radiation hold the possibilities to distort the configuration of organic molecules, dissociate molecular bonds, and trigger oxidation-reduction reactions, all of which could provide an important step to the onset of dissociation necessary to create hydrocarbons in petroleum systems. Further understanding the effects of γ-radiation in hydrocarbons systems could lead to more information about the radiolytic processes that take place. This could eventually lead to further understanding of oil generation in organic-rich source beds.
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State dysfunction : the concept and its application to South Africa / Wynand Neethling GreffrathGreffrath, Wynand Neethling January 2015 (has links)
The phenomenon of state dysfunction has, over the last two decades, become a prominent empirical and scholarly concern internationally and, more recently, domestically. This study endeavours to extend and improve the understanding of dysfunctional states in the scientific domain – in the developing world in general, as well as the South African context in particular.
Given the dearth of conceptual literature in the field of dysfunctional states, the first part of this study concerns the pursuit of a novel conceptualisation of state dysfunction, premised upon the Weberian state as a comprehensive point of departure. Subsequently, meta-theoretical, theoretical, applicational and operational frameworks are developed through which this concept may be integrated by using a scientific method and ultimately studied empirically in pursuit of valid and reliable knowledge pertaining to the phenomenon.
The outcome of the above-mentioned process is a multi-criteria operational framework that enables evaluation and analysis with the purpose of determining the approximation to – and extent of – state dysfunction in a given empirical context. Accordingly, the second part of this study concerns the evaluation and analysis of the South African state. The outcome of this process is an account of South African state dysfunction that is at once comprehensive and thorough. / PhD (Political Studies), North-West University, Potchefstroom Campus, 2015
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State dysfunction : the concept and its application to South Africa / Wynand Neethling GreffrathGreffrath, Wynand Neethling January 2015 (has links)
The phenomenon of state dysfunction has, over the last two decades, become a prominent empirical and scholarly concern internationally and, more recently, domestically. This study endeavours to extend and improve the understanding of dysfunctional states in the scientific domain – in the developing world in general, as well as the South African context in particular.
Given the dearth of conceptual literature in the field of dysfunctional states, the first part of this study concerns the pursuit of a novel conceptualisation of state dysfunction, premised upon the Weberian state as a comprehensive point of departure. Subsequently, meta-theoretical, theoretical, applicational and operational frameworks are developed through which this concept may be integrated by using a scientific method and ultimately studied empirically in pursuit of valid and reliable knowledge pertaining to the phenomenon.
The outcome of the above-mentioned process is a multi-criteria operational framework that enables evaluation and analysis with the purpose of determining the approximation to – and extent of – state dysfunction in a given empirical context. Accordingly, the second part of this study concerns the evaluation and analysis of the South African state. The outcome of this process is an account of South African state dysfunction that is at once comprehensive and thorough. / PhD (Political Studies), North-West University, Potchefstroom Campus, 2015
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Extending the validity range of the linear, fluid description of parametric instabilities in laser produced plasmaMachacek, A. C. January 2000 (has links)
No description available.
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The effect of garlic extracts on the control of postharvest pathogens and postharvest decay of applesDaniel, Chanel Karousha 04 1900 (has links)
Thesis (MSc)--Stellenbosch University, 2014. / ENGLISH ABSTRACT: Apples are an important export commodity for the South African market, and
postharvest losses that occur as a result of decay due to infection with pathogenic fungi such
as Botrytis cinerea Pers., Penicillium expansum (Link) Thom. and Neofabraea alba (E.J.
Guthrie) are of major concern for all parties concerned with fruit production and distribution.
Decay control of these fungi is primarily managed through the use of synthetic
fungicides; however, pathogen development of resistance to these fungicides and recent
worldwide concern over healthier living and a greener environment has called for the
discriminate use of synthetic chemicals. This has opened up an avenue for the development
of safer and more environmentally friendly alternatives to control postharvest decays. The
use of plant extracts and essential oils are favoured as natural sources of antimicrobials whilst
still being safe for human consumption and having no negative impact on the environment.
Allium sativum (garlic) is one such plant species that is well documented for its value
in improving human health and is readily available for consumption not just as a flavour
component of food but also to be taken as a daily herbal diet supplement. Given the
antimicrobial effectiveness of garlic against human pathogens and ailments, its value as an
antifungal agent against postharvest pathogens causing grey mould, blue mould and bull’s
eye rot of apples was investigated in vitro and in vivo within this study. Furthermore, an
attempt was made to elucidate the chemical components of garlic extracts by gas
chromatography-mass spectrometry (GC-MS). All experiments in this study were carried out with garlic extracts prepared from fresh
garlic bulbs. For the in vitro experiments, two extract preparations of garlic, one containing
ethanol (Extract 1) and one where ethanol had been removed by evaporation (Extract 2), was
tested for antifungal action within an amended media experimental design. Both extract
preparations were each subjected to two dilution series (0-80% garlic extract) with water and
ethanol as diluents. Both extract preparations were successful at retarding pathogen mycelial
growth and spore germination; however, concentrations of Extract 2 (ethanol evaporated) and
diluted with distilled water provided markedly better inhibition of B. cinerea and
P. expansum than the ethanolic dilutions of extract 2. Both extract preparations yielded
similar inhibitory results when tested against N. alba. Due to the results achieved in the
amended media experiments, the use of a crude garlic extract without ethanol and diluted in water was considered to be the best option for further tests throughout the remainder of the
study. In vitro volatile effects of crude garlic extracts at concentrations between 0 and 40%
garlic extract were subsequently tested. Garlic volatiles were effective in inhibiting pathogen
mycelial growth and spore germination of all three pathogens, at lower concentrations
compared to the amended media experiments. In vitro volatile exposure with garlic extracts
was more effective at inhibiting N. alba than direct application of the extracts.
Curative and protective application of garlic extracts and clove oil for increased
fungal inhibition through synergism was tested by direct and volatile exposure to the
pathogens in vivo on three economically important apple cultivars; ‘Granny Smith’, ‘Golden
Delicious’, and ‘Pink Lady’. Direct exposure of artificially wounded and inoculated fruit to
the garlic extract and clove oil revealed that garlic extracts applied curatively but not
protectively effectively controlled decay caused by B. cinerea and P. expansum on all apple
cultivars. Both curative and protective applications were ineffective in controlling N. alba. In
vivo volatile exposure to the garlic extracts and clove oil did not inhibit decay on any of the
cultivars and was not effective against any of the three pathogens investigated.
A full chemical profile analysis was done by GC-MS analysis of garlic extract
samples. The compounds diallyl disulphide, allyl methyl trisulphide, allyl methyl disulphide
and dimethyl trisulphide were detected in relatively high amounts. This result suggests that
the abundance of sulphur and sulphur related compounds detected may be responsible for the
antifungal action noted in the experimental studies. In conclusion, garlic was shown to have antifungal activity against B. cinerea,
P. expansum and N. alba. The pathogens used in this study were not compared with each
other, but undoubtedly each pathogens reacts differently to exposure to the garlic extracts. It
would therefore be advisable to investigate the effects of the extracts on each of the
pathogens in a more in-depth study. More investigations into the application of the garlic
extracts is required before it may be recommended for use; however, results for the use of
garlic extracts against these postharvest pathogens and the postharvest decay they cause are
promising. / AFRIKAANSE OPSOMMING: Appels is ‘n belangrike uitvoerproduk vir die Suid-Afrikaanse vrugtebedryf, maar
noemenswaardige na-oes verliese word weens bederf deur patogeniese swamme soos Botrytis
cinerea Pers., Penicillium expansum (Link) Thom. en Neofabraea alba (E.J. Guthrie) ervaar.
Dit raak alle partye betrokke met die produksie en verspreiding van hierdie vrugsoort.
Hierdie swamme word hoofsaaklik met behulp van kunsmatige swamdoders beheer,
alhoewel weerstand-ontwikkeling en wêreldwye bewusmaking van ‘n gesonder leefstyl en
omgewing die gebruik van kunsmatige middels streng aanspreek en die ontwikkeling van
veiliger en meer omgewingsvriendelike alternatiewe middels verlang. Plant-ekstrakte en
essensiële olies kan dien as sulke middels en is natuurlike bronne van anti-mikrobiese
aktiwiteit, is veilig vir menslike verbruik en het ook geen negatiewe invloed op die
omgewing nie. Allium sativum (knoffel) is so ‘n plantspesie wat as alternatiewe middel
gebruik kan word. Dit is bekend vir sy waarde in die verbetering van menslike gesondheid, is
maklik bekombaar en word nie net as ‘n geurmiddel vir voedsel gebruik nie, maar ook as ‘n
daaglikse krui-aanvulling. Gegewe die anti-mikrobiese doeltreffendheid van knoffel teenoor
menslike patogene en kwale, is die werking (in vitro en in vivo) teen na-oes patogene wat
grys skimmel, blou skimmel en teikenvrot in appels veroorsaak, in hierdie studie ondersoek.
Bepaling van die chemiese samestelling van die knoffel-ekstrak is ook met behulp van gaschromatografie
massa spektrometrie (GK-MS) onderneem.Vars knoffelbolle is vir elke
eksperiment in hierdie studie gebruik met die voorbereiding van die knoffel-ekstrak. Vir die
in vitro eksperiment is twee knoffel-ekstrakte voorberei, naamlik: ‘n ekstrak wat etanol bevat
(Ekstrak 1) en een waarvan die etanol verwyder is met verdamping (Ekstrak 2). Die ekstrakte
is getoets vir werking teen fungi in kultuur-medium.. Albei ekstrakte is verdun tot twee
konsentrasie reekse (0-80%) met water en etanol as verdunningsmiddels. Albei ekstrakte het
suksesvolle werking getoon teenoor die patogene ten opsigte van vertraging van miseliumgroei
en spoor-ontkieming, alhoewel konsentrasies van Ekstrak 2, verdun met gesuiwerede
water, patogene B. cinerea en P. expansum beter onderdruk het as Ekstrak 2 verdunnings
met etanol.. Beide ekstrakte en hul afsonderlike verdunnings met etanol en water het
soortgelyke resultate gelewer met onderdrukking van N. alba.
Volgens resultate wat verkry is van die kultuur-medium eksperimente, is Ekstrak 2
verdun met gesuiwerde water beskou as die geskikste vir verdere toetse in hierdie studie. Die vlugtige effek van Ekstrak 2 is in vitro getoets by konsentrasies tussen 0 tot 40%. Die
vlugtige stowwe van knoffel het al drie patogene se groei en spoor-ontkieming effektief
onderdrukby laer konsentrasies as wat gebruik is in die kultuur-medium eksperiment. Dus is
in vitro blootstelling van N. alba aan die vlugtige stowwe meer effektief as direkte toediening
van die ekstrakte.
Die voorkomende en beskermende effek van die knoffel-ekstrak, asook naeltjie-olie,
is in vivo ondersoek om te bepaal of die stowwe saam sterker onderdrukking van die
patogene kon bewerkstellig. Direkte en vlugtige blootstelling is op drie ekonomies-belangrike
appel-kultivars getoets, naamlik: ‘Granny Smith’, ‘Golden Delicious’ en ‘Pink Lady’. Direkte
blootstelling met die knoffel-ekstrak en naeltjie-olie aan gewonde en ge-inokuleerde vrugte
het aangedui dat B. cinerea- en P. Expansum-bederf net beheer kon word indien knoffel
voorkomend toegedien is vir al die ondersoekte appel-variëteite. Voorkomende en
beskermende toediening was onsuksesvolle om N. alba te beheer. In vivo blootstelling van
die drie patogene aan die knoffel-ekstrak en naeltjie-olie se vlugtige stowwe kon nie enige
van die patogene effektief onderdruk nie en was onsuksesvol in bederf-beheer.
‘n Volledige chemiese profiel is saamgestel deur GK-MS ontleding van die knoffelekstrakte.
Hoë vlakke van verbindings dialliel disulfied, alliel-metiel-tri-sulfied, alliel-metieldisulfied
en dimetiel-trisulfied is bespeur. Die aantal vrye sulfied en sulfied-verwante
verbindings in die ekstrak kan moontlik ‘n verduideliking bied vir die anti-swam werking
waargeneem gedurende hierdie studie. Ten slotte: knoffel toon ‘n anti-swam werking teenoor B. cinerea, P. expansum en N.
alba. Die patogene in hierdie studie is nie met mekaar vergelyk nie, omdat elkeen uniek en
uiteenlopend op knoffel reageer het. Alhoewel die huidige studie alreeds belowende resultate
gelewer het, moet die ekstrak se effek op elke patogeen onderskeidelik nog in diepte
ondersoek word, asook die wyse van die toediening in die na-oes praktyk voordat hierdie
middel aanbeveel kan word vir gebruik.
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Methodological aspects within the FMCA-method : do incubation time and the amount of tumor cells influence the antitumoral effect?Svensson, Johanna January 2008 (has links)
<p>ABSTRACT</p><p>Chemotherapy is a common method used for cancer treatment. Especially when it concerns cancers that have grown invasively it seems to be the only efficient treatment due to the substances ability to reach and affect almost the entire body. One major obstacle regarding chemotherapy is that the patients often develop resistance to the cytotoxic substances used. Fluorometric microculture cytotoxicity assay (FMCA) is a method developed to measure sensitivity of tumor cells to different cytotoxic substances in vitro. The assay is based on hydrolysis of fluorescein diacetate to fluorescein by cells with intact cell membranes after incubation with drugs for 72 hours. This study investigated the impact of two methodological factors that may cause errors in the achieved results; namely the possible occurrence of drug decay during incubation and the use of an inappropriate amount of cells. These factors were tested by exposing the cytotoxic drugs to pre-incubation in absence of tumor cells for different times and to use suspensions with different concentrations of cells. The results indicated occurrence of drug decay in 3 of the 18 substances tested and that the amount of cells affected the results for most of the drugs tested but to different extent.</p>
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Development of the BaBar trigger for the investigation of CP violationAndress, John Charles January 2000 (has links)
No description available.
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