As interações tróficas de 31 espécies de peixes e 2 de lulas da Baía do Araçá, São Sebastião (SP), foram investigadas por meio dos isótopos estáveis de carbono (δ13C) e nitrogênio (δ15N). Os valores de δ13C das espécies variaram entre -17,2‰ e -12,1‰, e os de δ15N, entre 10,0‰ e 14,5‰. Os valores de δ13C dos produtores e consumidores permitiram indicar que as espécies analisadas participam das teias tróficas, pelágica e bentônica, e têm como base da cadeia alimentar o fitoplâncton, os microfitobentos e a matéria orgânica dos sedimentos. Maiores valores de δ13C nos peixes e lulas foram registrados no verão, associados a valores mais altos na base. As posições tróficas das espécies variaram entre 3,18 e 4,72, indicando que atuam como consumidores secundários e terciários. A composição da dieta dos peixes, avaliada pelo modelo de mistura isotópica, apontou elevada contribuição de presas como Polychaeta, Tanaidacea e Ophiuroidea, grupos com alta abundância na Baía do Araçá e no Canal de São Sebastião. A ingestão de presas disponíveis no interior da baía e no canal evidenciou a importância desses peixes e lulas como carreadores de nutrientes, realizando tanto acoplamento pelágico-bentônico, como entre as regiões sublitoral e entremarés da Baía do Araçá. / The trophic interactions of 31 fish species and 2 squid species of the Araçá Bay, São Sebastião (São Paulo, Brazil), were investigated through carbon (δ13C) and nitrogen (δ15N) stable isotopes. The δ13C of the species ranged from -17.2‰ to -12.1‰, and the δ15N, from 10.0‰ to 14.5‰. The δ13C data of the producers and consumers indicated that the species analysed are part of the pelagic and benthic trophic webs, and have phytoplankton, microphytobenthos and organic matter from the sediment as the base of the food web. Higher values of δ13C were registered in the summer, linked to the higher values at the base. The trophic positions of the species varied between 3.18 e 4.72, an indication that they act as secondary and tertiary-quaternary consumers. The diet composition of fish, evaluated trough the isotope mixing model, showed high contribution of prey, such as Polychaeta, Tanaidacea and Ophiuroidea, groups highly abundant in the Bay and the adjacent São Sebastião Channel. The intake of available prey in the intertidal region and in the Channel revealed the importance of the fish and squid as nutrient pathway links, coupling the pelagic-benthic systems and the sublittoral and intertidal regions of the Araçá Bay.

As comunidades mudam no tempo e espaço em função de pressões decorrentes da estrutura do habitat e disponibilidade de recursos. O entendimento das relações ecológicas e interações das comunidades são essenciais para o manejo com objetivo de melhorar a qualidade da água através de interferências na cadeia trófica aquática e na dinâmica do ecossistema através de modelagem ecológica. O presente estudo foi desenvolvido em dois sistemas límicos subtropicais no extremo sul do Brasil: banhados temporários (‘campos de cultivo de arroz’) e um grande lago raso, lagoa Mangueira. O objetivo do trabalho nos banhados temporários constituiu-se em avaliar a dinâmica das comunidades planctônicas e íctica durante o desenvolvimento desses ecossitemas (um ciclo produtivo de cultivo de arroz). Nossos resultados evidenciaram um claro gradiente temporal direcionado pela disponibilidade de nutrientes no banhado temporário. Entretanto, as variáveis limnológicas não apresentaram nenhuma tendência espacial entre as estações amostrais. Através de regressão linear verificou-se correlação positiva entre clorofila a, nutrientes, biomassa zooplanctônica e, em especial, biomassa de copépodos. Por outro lado, biomassa de peixes e, particularmente, peixes planctívoros foram inversamente relacionados à concentração de clorofila a. Relações significativas entre o DOC com nutrientes, biomassa de plâncton e peixes foram igualmente identificadas ao longo do ciclo produtivo do arroz. Na lagoa Mangueira, sistema raso (zmed 3m), de 90 km de comprimento, o objetivo foi avaliar a distribuição espacial e temporal de plâncton e peixes em função da presença da macrófita emergente Zizaniopsis bonariensis. Além disso, foi verificada a existência de um gradiente longitudinal na lagoa e a estrutura da teia trófica do sistema. Análise de componentes principais e análise de redundância evidenciaram a presença de gradientes espacial (Norte/Sul) e temporal (sazonal) durante o estudo. Análise de similaridade (ANOSIM) aplicada às variáveis ambientais evidenciou diferenças significativas entre os extremos da lagoa (Norte e Sul). Transparência Secchi, DOC e clorofila a foram significativamente diferentes entre os pontos amostrais do Norte e Sul. Através de ANOVA verificou-se que os efeitos temporais sazonais são mais intensos no Norte da lagoa Mangueira. Com relação à estrutura da comunidade na lagoa Mangueira, a biomassa do bacterioplâncton, clorofila a, biomassa zooplanctônica e captura de peixes foram diferentes sazonalmente após a extração do efeito da estrutura de habitat, enquanto que no Sul apenas a clorofila a apresentou variação sazonal significativa. A estrutura de habitat (junto à Z. bonariensis e em água aberta) induziu diferenças significativas na concentração de clorofila a tanto no Norte como no Sul da lagoa Mangueira, após a extração dos efeitos decorrentes da sazonalidade. A captura de peixes também foi influenciada pela estrutura de habitat no Norte, após a extração do efeito sazonal. Análise de similaridade (ANOSIM) aplicada à comunidade de peixes também demonstrou diferenças significativas entre o Norte e o Sul da lagoa Mangueira, embora diferenças entre as áreas vegetadas e águas abertas não tenham sido verificadas. Biomassa dos peixes, número de capturas e riqueza específica foram diferentes entre os pontos amostrais. Baseado nas razões de δ13C and δ15N identificou-se a estrutura trófica da lagoa, bem como a posição trófica de espécies de peixes e as fontes de carbono do sitema. Análise de isótopos estáveis de nitrogênio permitiu a identificação de dois níveis tróficos de peixes na lagoa Mangueira. Macrófitas emergentes e perifíton foram identificadas como importantes fontes de carbono que sustentam a estrutura trófica do sistema. Análise de grupamento a partir de dados de δ13C e δ15N e de conteúdo estomacal identificou um arranjo perfeitamente filogenético entre as espécies de peixes analisadas, refletindo que, em sentido amplo, nichos alimentares são compartilhados por espécies taxonomicamente relacionadas. A dinâmica trófica da espécie de peixe dominante na lagoa, Oligosarcus jenynsii foi também analisada. Foram identificadas mudanças sazonais e ontogenéticas na dinâmica alimentar da espécie, evidenciando a grande plasticidade trófica associada com uma estratégia oportunista, característica de espécies carnívoras generalistas. As informações obtidas neste estudo permitiram identificar grande heterogeneidade espacial e claro gradiente longitudinal na lagoa Mangueira, tanto de fatores bióticos quanto abióticos, com reflexos na distribuição e abundância de plâncton e peixes. De posse destas informações foi possível alcançar um entedimento sobre a estrutura atual do sistema, bem como os direcionadores da sua dinâmica. A abordagem direcionada neste trabalho sobre o entendimento da estrutura atual de um lago raso subtropical possibilita futuros estudos na área da modelagem ecológica. A dinâmica das comunidades abordadas neste estudo vem subsidiar a parametrização de um modelo ecológico, com capacidade de estabelecer prognósticos, tendo como contorno, estressores naturais e antrópicos. / Biological communities change in time and space following driving pressures from differences in habitat structure and resource availability. Understanding the ecological role and interactions within aquatic community is essential for any management action trying to improve water quality by interferences in lake food web, ecosystem dynamics and modeling. The present study was carried out in two freshwater systems in Southern Brazil: an irrigated rice field and in a large shallow system, Mangueira Lake. The goal of this study in temporary wetlands was to evaluate the plankton and fish dynamics during a productive cycle. Our results evidenced a temporal gradient by nutrients availability in the temporary wetland studied. However, the limnological variables did not display any horizontal pattern among sampling stations. Linear regression showed a positive relationship between chlorophyll a and nutrients, zooplankton biomass and copepod biomass. In contrast, fish biomass and planktivorous fish biomass were inversely related to chlorophyll a. Statistically significant relationships between DOC with nutrients, plankton and fish biomass were also identified during the rice production cycle. In Mangueira Lake, a shallow system (zmed 3m) and 90 km long, the goal was to evaluate the spatial and temporal distribution of plankton and fish biomass as a function of the presence of the emergent macrophytes Zizaniopsis bonariensis. We also analyzed the existence of longitudinal gradient in lake and the food web structure in system. The PCA and RDA analyses showed the temporal (seasonal) and spatial (North/South) gradient during the study. Analysis of similarity (ANOSIM) applied to environmental variables showed significant differences between sampling sites (North and South). Secchi transparency, DOC and chlorophyll a were significantly different in North and South sampling sites. ANOVA results showed that season effects are stronger in the Northern sampling site. Concerning the community structure in the Mangueira Lake, bacterioplankton biomass, chlorophyll a, zooplankton biomass and fish captures were different seasonally after extracting the habitat structure effect, while in the Southern sampling site only chlorophyll a presented a seasonal significant variation. Habitat structure (by Z. bonariensis stands and open water samples) induced significant differences in chlorophyll a both in North and South samples after extracting seasonal effect. Fish captures do also responded to habitat structure in the North, after extracting the season effect. Analysis of similarity (ANOSIM) applied to fish community also showed significant differences between North and South, although no significant differences between vegetated and open water zones was observed. Fish biomass, number of captures, and richness were different between sampling sites. Based on the δ13C and δ15N ratios and analysis of stomach content of fish species, we provide also a description of food web structure, trophic positions of fish species and primary producers of system. Analysis of nitrogen isotope ratios yielded two fish trophic levels in Mangueira Lake. Emergent macrophytes and periphyton were important carbon source that sustain the food web structure of the system. Cluster analysis of δ13C and δ15N values and stomach content yielded a perfect phylogenetic arrangement of species. This result reflects that major feeding niches are shared by taxonomically related species. The feeding dynamics of the dominant fish species, Oligosarcus jenynsii was analysed by using analyses of stomach contents and stable isotopes signature. Seasonal and ontogenetic change in the feeding biology of O. jenynsii was identified, showing the high feeding plasticity, in addition to an opportunistic strategy of this generalist carnivore species. This study allows identifying a large spatial heterogeneity and clear longitudinal gradient both in biotic and abiotic factors, reflecting fish and plankton distribution and abundance. The evaluated parameters are intended to feed a mathematical model for the Mangueira Lake, looking for predictable scenarios from natural and anthropogenic stressors.

La surexploitation des prédateurs de haut niveau trophique (HTLP) peut déclencher des cascades trophiques qui souvent conduisent à une simplification des réseaux trophiques marins en réduisant leur résistance aux impacts humains. Les aires marines protégées (AMP) peuvent favoriser des augmentations d’abondance et biomasse des HTLP, mais la complète restauration des interactions trophiques, lorsque cela est possible, nécessite des délais importants. Cette thèse vise à proposer des outils intégrés de gestion pour évaluer le retour des HTLP et la restauration des interactions trophiques dans les AMP méditerranéennes, et à évaluer l’efficacité de ces outils pour estimer les impacts de la pêche sur les HTLP et le réseau trophique associé. Deux approches souvent éloignées ont été combinées : les suivis de terrain et la modélisation des réseaux trophiques. Pour échantillonner la communauté de poissons, nous avons proposé d'améliorer la technique traditionnelle de recensement visuel sous-marin en recourant à des transects de taille variable, adaptée à la mobilité des poissons. Cette méthode a alors permis d'augmenter la précision des estimations de densité et de biomasse des HTLP dans les trois AMP méditerranéennes suivies. Ensuite, nous avons évalué l'apport de la modélisation trophique avec les approches EwE et EcoTroph comme outil de gestion écosystémique pour les AMP méditerranéennes. Une structure standard de modèle a été proposée comme étant le meilleur compromis entre la complexité du modèle, la faisabilité de sa construction et la fiabilité de ses sorties. / The overexploitation of high trophic level predators (HTLP) may trigger trophic cascades, often leading to a simplification of marine food-webs and reducing their resilience to human impacts. Marine protected areas (MPAs) can foster increases of HTLP abundance and biomass, but long time frames are needed to observe a recovery, when possible, of lost trophic interactions. This PhD aimed to propose integrated management-tools to monitor HTLP recovery and the restoration of trophic interactions in Mediterranean MPAs, and to evaluate the effectiveness of these tools at assessing fishing impacts upon HTLP and the associated food-web. Two often distant approaches were combined: field monitoring and food-web modelling. First, to survey the fish assemblage, we proposed to improve the traditional underwater visual census technique of one size-transects with variable size transects adapted to fish mobility. This improvement increased the accuracy of density and biomass estimates of HTLP at three Mediterranean MPAs. We then evaluated the potential of food-web modelling with the Ecopath with Ecosim and Ecotroph approach as a tool to inform ecosystem-based management in Mediterranean MPAs. We proposed a standard model structure as the best compromise between model complexity, feasibility of model construction in terms of data collection, and reliability of model outputs. Key functional groups for which local accurate biomass data should be collected in priority in order to get reliable model outputs were identified.

Les forêts néotropicales accueillent une importante biodiversité encore méconnue. L’intégrité des écosystèmes naturels est menacée par les changements environnementaux (e.g., réchauffement climatique, destruction des habitats), par conséquent, identifier les facteurs structurants, naturels et anthropiques, du fonctionnement des écosystèmes, représente un défi scientifique crucial. L’inhérente complexité de ces milieux diversifiés pose de nombreux problèmes conceptuels et logistiques comme un échantillonnage exhaustif et/ou l’identification des espèces. Les broméliacées à réservoirs sont des écosystèmes miniatures adéquats pour pallier ces difficultés, car elles retiennent de l’eau de pluie et accumulent de la matière organique au creux de leurs feuilles, permettant ainsi de supporter des réseaux trophiques simples d’invertébrés aquatiques. Elles peuvent être échantillonnées exhaustivement, ont une forte abondance locale, et une large aire de répartition. De l’échelle locale à biogéographique, les travaux de cette thèse visent d’abord à comprendre comment ces communautés se structurent en réponse à l’hétérogénéité naturelle des forêts amazoniennes (e.g., ouverture de la canopée, fluctuations climatiques saisonnières), puis tente de prédire, par le biais d’expérimentations in situ et au laboratoire les réponses structurelles et fonctionnelles de ces communautés à divers scénarios de changement climatique. Une attention particulière a été portée sur l’impact de la température et des précipitations sur la physiologie et le comportement d’espèces clefs, et sur les interactions trophiques au sein des communautés. / Neotropical forests shelter an astonishing and underrated biodiversity. The integrity and stability of these natural ecosystems are threatened by human-induced environmental changes. Therefore, highlighting the determinants of ecosystem functioning, be they natural or anthropogenic, is a daunting but paramount scientific challenge. The intrinsic complexity of highly diversified ecosystems arouses both conceptual and logistical difficulties, which we handle, by manipulating tiny ecosystems, the tank bromeliads. The leaves of tank bromeliads form wells that hold rainwater and intercept leaf litter, allowing for a simple invertebrate aquatic community to thrive. These plants can be exhaustively sampled, are naturally replicated, and widely distributed.From local to biogeographic scales, this thesis aims at understanding how these communities respond to the natural heterogeneity of Amazonian forests, and at predicting the impacts of human-induced disturbances on the structure and functioning of these communities, using in situ and lab experiments. Particular focus is attributed to the influence of some aspects of climate changes (e.g., warming, and various precipitations scenarios) on individual physiology, behavior, and trophic interactions.

In tropical forests, ants are numerous, diversified and ecologically important, being present from forest floor to upper canopy and exploiting a wide variety of diets. Nearly half of the ant species are directly in contact with the ground stratum, including the leaf-litter and the underlying soil, for nesting or foraging. The main factors known to influence ant distribution and abundance can be environmental (e.g. heterogeneous distribution of microhabitat size, nutrient availability, microclimate, soil properties) or biotic (e.g. inter- and intraspecific competition, prey availability). Some of these factors, such as leaf-litter volume or prey availability, may also vary seasonally. Also, the Ecuadorian Andes are known as being a hotspot of biodiversity for a large array of organisms, but it was not documented until now if this is also the case for ants.<p><p>The general aim of the PhD project was to identify, by both descriptive and experimental approaches, the factors determining the structure of a ground-dwelling ant assemblage at a small-spatial scale and its temporal variation in an evergreen premontane tropical forest of the Ecuadorian Andes.<p><p>In the descriptive part of the project, we studied both horizontal (along a transect) and vertical (across ground layers) species diversity and distribution of ground-dwelling ants. To attempt to explain the observed patterns, we measured a series of environmental factors varying at small spatial scale and/or seasonally: canopy openness, leaf-litter quantity, slope, and a series of soil physico-chemical properties (e.g. texture). The ant assemblage richness appeared to be at least as high as in the Amazonian Basin, with up to 33 species per m². The heterogeneity of species spatial distribution at small spatial scale was high, with distinct species composition (average Jaccard index = 0.2 ± 0.08 SD) and abundance (up to 40 fold) in contiguous plots. We observed a strong seasonal effect on the ant assemblage structure. The higher ant diversity and abundance found at the surface and in the mineral soil during the dry season suggested a seasonal peak of activity on the ground surface and the seasonal migration of drought-sensitive species downwards in the soil. Ant diversity was related to distinct environmental factors according to the ground layer considered. We found strong correlations between litter amount and dominant ant distribution in the leaf-litter layer, while we found no correlation with any factor in the soil layer. The low amount of negative association between dominant species suggested a low interspecific competition.<p><p>In the experimental part of the project, our aim was to identify experimentally the relative importance of habitat size vs. prey availability in structuring the leaf-litter ant assemblage. We studied the response of various ant trophic groups to an increased nutrient availability which boosted the decomposition of their leaf-litter habitat and enhanced the abundance of their prey. Bottom-up effect on the ant fauna (and other predaceous arthropods) regarding species composition and dominance was also studied. Stable isotope analysis was used to distinguish trophic groups among ants and mesofauna. Ants responded differentially according to their trophic group: despite increased prey availability, predatory species were negatively affected by nutrient supply, while other ant trophic group densities did not change. Our results showed that predatory ants are limited by habitat size rather than by prey availability, and that these ants are more affected by habitat loss than their prey, other ant trophic groups and other macrofauna taxa. Furthermore, a taxonomic shift occurred within each ant trophic group, leading to the replacement of dominant genera in fertilized plots.<p><p>As a conclusion, our results emphasize the importance of distinguishing layers among the ground matrix, since both ant faunas and their response to environmental factors vary vertically and seasonally. The distribution of ground-dwelling ants was only weakly explained by both the environmental factors measured and by biotic interactions, at a small spatial scale. Also, our results emphasize the importance of distinguishing trophic groups among the ant assemblage, since the response of these groups under changing conditions was different. In this regard, stable isotope analysis was a useful tool for investigating the trophic ecology of various leaf-litter taxa, and it was successfully used for the first time to assess the diet of leaf-litter ants and their position in the Brown Food Web relative to other taxa. Also, the isotopic approach allowed us to increase the knowledge about the biology of a rare and cryptic ant species, by revealing its top-predatory position. The outstanding local species richness that we observed confirms that the Ecuadorian Andes are also a biodiversity hotspot for ants. / Doctorat en Sciences agronomiques et ingénierie biologique / info:eu-repo/semantics/nonPublished

Climate change is expected to increase the precipitation ~30% in higher latitudes during the next century, increasing the land runoff via rivers to aquatic ecosystems. The Baltic Sea will receive higher river discharges, accompanied by larger input of allochthonous dissolved organic matter (DOM) from terrestrial ecosystems. The salinity will decrease due to freshwater dilution. The allochthonous DOM constitute a potential growth substrate for microscopic bacterioplankton and phytoplankton, which together make up the basal trophic level in the sea. The aim of my thesis is to elucidate the bacterial processing of allochthonous DOM and to evaluate possible consequences of increased runoff on the basal level of the food web in the Baltic Sea. I performed field studies, microcosm experiments and a theoretical modeling study. Results from the field studies showed that allochthonous DOM input via river load promotes the heterotrophic bacterial production and influences the bacterial community composition in the northern Baltic Sea. In a northerly estuary ~60% of bacterial production was estimated to be sustained by terrestrial sources, and allochthonous DOM was a strong structuring factor for the bacterial community composition. Network analysis showed that during spring the diversity and the interactions between the bacteria were relatively low, while later during summer other environmental factors regulate the community, allowing a higher diversity and more interactions between different bacterial groups. The influence of the river inflow on the bacterial community allowed “generalists” bacteria to be more abundant than “specialists” bacteria.    Results from a transplantation experiment, where bacteria were transplanted from the northern Baltic Sea to the seawater from the southern Baltic Sea and vice versa, showed that salinity, as well as the DOM composition affect the bacterial community composition and their enzymatic activity. The results showed that α-proteobacteria in general were favoured by high salinity, β-proteobacteria by low salinity and terrestrial DOM compounds and γ-proteobacteria by the enclosure itself. However, effects on the community composition and enzymatic activity were not consistent when the bacterial community was retransplanted, indicating a functional redundancy of the bacterial communities.  Results of ecosystem modeling showed that climate change is likely to have quite different effect on the north and the south of the Baltic Sea. In the south, higher temperature and internal nutrient load will increase the cyanobacterial blooms and expand the anoxic or suboxic areas. In the north, climate induced increase in riverine inputs of allochthonous DOM is likely to promote bacterioplankton production, while phytoplankton primary production will be hampered due to increased light attenuation in the water. This, in turn, can decrease the production at higher trophic levels, since bacteria-based food webs in general are less efficient than food webs based on phytoplankton. However, complex environmental influences on the bacterial community structure and the large redundancy of metabolic functions limit the possibility of predicting how the bacterial community composition will change under climate change disturbances.

Les changements philosophiques et techniques qui ont accompagné l’avènement de notre civilisation «moderne » laissent dans leurs sillages un cortège de bouleversements physiques, chimiques etbiologiques à l’échelle du globe. Aujourd’hui les preuves sont nombreuses pour affirmer que cechangement global modifie le fonctionnement de la « Nature ». La nécessité d’appréhender et decomprendre ce fonctionnement a conduit à interroger les processus de reconfiguration des diversescomposantes et fonctionnalités des éco-sociosystèmes sous l’influence des changements globaux.Concentrant aujourd’hui près de 75 % de la population humaine, les écosystèmes estuariens et côtierssont particulièrement vulnérables, de plus en plus exploités et contaminés et leur biodiversité estlargement impactée. L’estuaire de la Gironde, un des plus grands estuaires d’Europe de l’Ouest, montredepuis au moins trois décennies des signes de ce changement global. C’est dans ce contexte que cettethèse décrit la trajectoire fonctionnelle de l’écosystème estuarien au cours des trente dernières années.Trois aspects du fonctionnement y sont décrits, analysés et discutés. L’étude de la dynamiqueinterannuelle du cortège ichtyologique a permis, tout d’abord, de mettre en avant trois périodes defonctionnement distinctes dans les dernières décennies. L’exploration des rythmes saisonniers despoissons et de leurs proies zooplanctoniques dans chacune d’elle a ensuite permis de montrer desmodifications de la phénologie de ces espèces à même d’engendrer, pour certaines, desdésynchronisations temporelles entre proies et prédateurs questionnant, par conséquent, la stabilité desrelations trophique et la capacité trophique du milieu. Enfin, un modèle holistique du réseau trophique aété réalisé pour chacune des trois périodes. La comparaison des propriétés de chacun d’eux a permisde conclure à une augmentation du stress de l’estuaire de la Gironde et à remettre en question sacapacité à durablement jouer son rôle de nourricerie pour les stocks de poissons marins du Golfe deGascogne. Quatre scénarii d’évolutions prospectifs synthétisent les conclusions de cette étude etdonnent à voir des avenirs possibles de cet écosystème. / The philosophical and technical changes associated with the emergence of our "modern" civilizationcaused numbers of physical, chemical and biological changes those led to changes in the functioning of"Nature". The necessity to understand this functioning has led to question the reconfiguration process ofthe various eco-sociosystems’ components and features under the influence of Global Change. TheGironde estuary, one of the largest estuaries in Western Europe, has shown since three decades, signsof this Global Change. In this context, this study highlights the functional trajectory of this estuarineecosystem during the last thirty years. Three aspects of its functioning are described, analyzed anddiscussed. First, the study of the inter-annual fish community evolution highlighted three periods withdistinct functioning. The exploration of the seasonal patterns of the fish and zooplankton dynamicsduring each period shows phenological changes able to cause, in some cases, prey-predator mismatch.This leads to question the stability of trophic interactions and the trophic capacity of the ecosystem forfish. Finally, within each of these three periods, the estuarine food web was modeled within a holisticframework. The comparison of the functional properties of each model highlighted an increase in thestress of the Gironde estuary and questioned the sustainability of its nursery function for Bay of Biscaymarine stocks. Four forecasting scenarios summarize conclusions of this study and let see possiblefutures of this ecosystem.

Lorsque deux espèces exploitent la même niche écologique, elles entrent en compétition pour l'accès aux ressources. Or, un accès limité aux ressources réduit la fitness des individus. La compétition interspécifique va donc agir comme une pression de sélection qui peut mener à des modifications physiologiques ou comportementales pour partager les ressources, car si elles ne sont pas partagées la compétition entraînera le déplacement ou la disparition d'une des deux espèces. Aleochara bilineata et A. bipustulata sont deux coléoptères staphylins parasitoïdes qui s'attaquent à la mouche du chou Delia radicum. Elles ont des paramètres biologiques différents, notamment au niveau des traits d'histoire de vie (qui semblent avantager A. bipustulata) et du spectre d'hôtes (plus généraliste chez A. bipustulata). Ces deux espèces partagent cependant la même stratégie d'exploitation des hôtes et présentent l'originalité que la femelle pond ses œufs à proximité des hôtes et non à l'intérieur, ce qui les distingue des hyménoptères parasitoïdes qui font l'objet de nombreuses études. La larve Aleochara de premier stade est donc mobile et doit trouver et sélectionner elle même un hôte pour s'y développer. Il y a ainsi des possibilités d'adaptations comportementales à la compétition à la fois pour les adultes et les larves de premier stade. Dans ce projet de thèse, nous avons donc choisi d'explorer la niche écologique de ces deux espèces de façon originale en étudiant les modifications comportementales induites par la présence de compétiteurs à la fois chez les femelles adultes et les larves de premier stade. Nous avons également identifié les communautés bactériennes associées aux deux espèces en compétition mais aussi à leur hôte D. radicum et à un autre compétiteur parasitoïde, l'hyménoptère Trybliographa rapae, dans le but d'étudier ultérieurement les impacts des différents partenaires bactériens sur la niche écologique des deux espèces de coléoptères en compétition. Nos résultats montrent que les femelles de l'espèce spécialiste A. bilineata adaptent leurs comportements aux compétiteurs qu'elles rencontrent et sélectionnent les sites de ponte présentant les meilleures chances de succès parasitaire pour leurs larves. Par ailleurs, les larves de premier stade de l'espèce spécialiste dominent largement la compétition larvaire lorsqu'elles sont en compétition avec les larves de l'espèce généraliste. Enfin, les communautés bactériennes des deux espèces de coléoptères sont plus proches entre elles qu'avec les autres membres du réseau trophique étudiés mais comportent des différences à explorer. Ces résultats sont discutés dans le cadre de l'adaptation des choix comportementaux des individus d'une espèce spécialiste à la présence de compétiteurs généralistes et de la coexistence de ces deux espèces dans le milieu naturel. / When two species live in the same ecological niche, they compete for resources. Since a limited access to resources reduces fitness, interspecific competition represents a selection pressure that can lead to physiological or behavioral changes to share resources, because not sharing them will cause the displacement or disappearance of the weaker competitor. Aleochara bilineata and Aleochara bipustulata are two coleopteran parasitoids and attack the same host, the cabbage root fly Delia radicum. These two species have different biological parameters, particularly in their life history traits (which seem to favor A. bipustulata) and host spectrum (A. bipustulata is more generalist). These two species share the same strategy to exploit their host (idiobiont ectoparasitoid). Unlike parasitoid wasps (the object of most studies on parasitoids) coleopteran parasitoid females do not lay their eggs directly inside the host but in locations likely to harbour hosts. Aleochara first instars are mobile and need to find and select a host where they will develop. There is thus the possibility of behavioral adaptations to competition for both for adults and first instars. In this project, we have chosen to explore the ecological niche of these two species in an original way by studying behavioral changes induced by the presence of competitors both in adult females and first instars. We also studied bacterial communities associated to the two competing species but also those of their host D. radicum and of another competitor, the parasitoid wasp Trybliographa rapae, in order to later study the impacts of different bacterial partners in the ecological niche of the two beetle species in competition. Our results show that females of the specialist A. bilineata adapt their behavior to the competitors they face and select oviposition sites with the best probability of parasitism success. Moreover, first instars of A. bilineata dominate the larval competition when competing with larvae of the generalist A. bipustulata. Finally, bacterial communities of the two rove beetles are closer to each other than other members of the food web studied and their differences should be investigated. These results are discussed in the context of behavioral adaptation of specialists to the presence of generalist competitors and the coexistence of these two species in the field.

No description available.

No description available.