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Structural Analysis and a Kink Band Model for the Formation of the Gemini Fault Zone, an Exhumed Left-Lateral Strike Slip Fault Zone in the Central Sierra Nevada, CaliforniaPachell, Matthew A. 01 May 2001 (has links)
The structure and regional tectonic setting of an exhumed, 9.3-km long, left-lateral strike-slip fault zone eludicates processes of growth, linkage, and termination for strike-slip fault zones in granitic rocks. The Gemini fault zone is composed of three steeply dipping, southwest-striking, noncoplanar segments that nucleated and grew along preexisting joints. The fault zone has a maximum slip of 131 m and is an example of a segmented, hard-linked fault zone in which geometrical complexities of the faults and compositional variations of protolith and host rock resulted in nonuniform slip orientations, complex interactions at fault segments, and an asymmetric slip-distance profile. Regional structural analysis shows that joints and left-lateral fault zones have accommodated slip within a 4.8-km wide, right-lateral monoclinical kink band with vertical fold axes and northwest-striking axial surfaces. Geometric modeling of the kink band indicates that as little as 1.1 km of right-lateral displacement across the kink band may have produced the observed slip on kilometer-scale faults within the kink band.
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Photo-reactive Surfactant and Macromolecular Supramolecular StructuresCashion, Matthew Paul 11 June 2009 (has links)
For the first time nonwoven fibrous scaffolds were electrospun from a low molar mass gemini ammonium surfactant, N,N–-didodecyl-N,N,N–,N–-tetramethyl-N,N–-ethanediyl-di-ammonium dibromide (12-2-12). Cryogenic transmission electron microscopy (cryo-TEM) and solution rheological experiments revealed micellar morphological transitions of 12-2-12 in water and water:methanol (1:1 vol). Electrospinning efforts of 12-2-12 from water did not produce fibers at any concentration, however, electrospinning 12-2-12 in water:methanol at concentrations greater than 2C* produced, hydrophilic continuous fibers with diameters between 0.9 and 7 μM.
Photo-reactive surfactants were synthesized to electrospin robust surfactant membranes. Before electrospinning it was important to fundamentally understand the structure-property relationship of gemini surfactants. The thermal and solution properties were explored for a series of ammonium gemini surfactants using differential scanning calorimetry (DSC), polarized light microscopy (PLM), and conductivity experiments. The Kraft temperature (Tk) was measured in water and water:methanol (1:1 vol) to investigate the influence of solvent on the surfactant solution properties.
Other experiments investigate how associated photo-curable architectures are applicable in macromolecular architectures, to gain a fundamental understanding of how hydrogen bonding associations influence the photo-reactivity of functionalized acrylic copolymers. Novel hot melt pressure sensitive adhesives (HMPSAs) were developed from acrylic terpolymers of 2-ethylhexyl acrylate (EHA), 2-hydroxyethyl acrylate (HEA), and methyl acrylate (MA) functionalized with hydrogen bonding and photo-reactive functionalities. The synergy of hydrogen bonding and photo-reactivity resulted in higher peel values and rates of cinnamate photo-reactivity with increasing urethane concentration.
Random copolymers of poly(n-butyl acrylate (nBA)-co-2-hydroxyethyl methacrylate (HEMA)) were functionalized with hydrogen bonding and photo-reactive groups to explore the photo-curing of associated macromolecular architectures. The influence of urethane hydrogen bonding on the photo-reactivity of cinnamate-functionalized acrylics was investigated with photo-rheology and UV-vis spectroscopy. Cinnamate-functionalized samples displayed an increase in modulus with exposure time, and the percentage increase in modulus decreased as the urethane content increased. The synergy of hydrogen bonding and photo-reactive groups resulted in higher rates of cinnamate photo-reactivity with increasing urethane concentration.
Electrospun fibers were in situ photo-crosslinked to develop fibrous membranes from cinnamate functionalized low Tg acrylics. Electrospinning was conducted approximately 55 °C above the Tg of the cinnamate acrylate and the electrospun fibers did not retain their fibrous morphology without photo-curing. However, electrospun fibers were collected that retained their fibrous morphology and resisted flow when in situ photo-cured during electrospinning. The intermolecular photo-dimerization of cinnamates resulted in a network formation that prevented the low Tg cinnamate acrylate from flowing. / Ph. D.
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Effet de contre-ion sur les propriétés d'amphiphiles cationiquesManet, Sabine 20 November 2007 (has links) (PDF)
Des tensioactifs dimériques cationiques ont été étudiés en faisant varier la nature du contre-ion afin de déterminer quels sont les effets ioniques qui influencent principalement leurs propriétés d'agrégation.<br />La méthode de synthèse de ces molécules a été adaptée afin de permettre l'investigation d'une large variété de systèmes se distinguant par leur contre-ion. La micellisation de ces tensioactifs a fait l'objet d'une étude par conductimétrie qui a permis de montrer l'influence prépondérante de l'hydrophobie du contre-ion associée à des effets secondaires tels que l'hydratation ou la morphologie du contre-ion. Nous avons aussi montré comment l'utilisation d'un colorant, l'Orange de Méthyle, peut s'avérer être un outil d'investigation de l'hydratation et de l'ionisation des micelles. La solubilité de ces tensioactifs dans l'eau a également été examinée à travers l'étude de leur température de Krafft en fonction du contre-ion. Les morphologies des assemblages formés par ces systèmes en solution aqueuse ont également fait l'objet d'une étude par diverses techniques de microscopie. La dernière partie est consacrée à une classe particulière de tensioactifs cationiques à double chaîne complexés à des mononucléotides anioniques. Les propriétés d'agrégation de ces nucléolipides ainsi que les morphologies des structures formées dans l'eau ont été étudiées. On a montré que le confinement de nucléotides chiraux sur des membranes cationiques peut induire l'émergence d'une chiralité supramoléculaire. De plus, ces systèmes mettent en place une reconnaissance moléculaire spécifique, distincte de celle se produisant dans l'ADN, dont les causes restent encore à clarifier.
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Gemini cationic surfactant-based delivery systems for non-invasive cutaneous gene therapyBadea, Ildiko 01 June 2006
Gene transfer represents an important advance in the treatment of both genetic and acquired diseases. Topical gene therapy involves administration of the genetic material onto the surface of skin and mucosal membranes. Cationic gemini surfactants (m-s-m, where m represents the carbon atoms in the alkyl tail and s represents the carbon atoms in the spacer) are a novel category of delivery agents with especially high potential for polynucleotides. This is due to their structural versatility, ability to bind and condense DNA, and relatively low toxicity. <p>The objectives were to design, construct and characterize a cationic, non-viral gemini surfactant-based delivery system for an IFN-ã coding plasmid suitable for cutaneous gene therapy and to evaluate this novel therapeutic approach in a Tsk (tight-skin scleroderma) mouse model to determine its clinical feasibility. <p>The delivery systems were characterized by microscopy, dynamic light scattering (DLS), circular dichroism (CD) and small angle X-ray scattering (SAXS). <i>In vitro</i> gene expression was evaluated in PAM 212 keratinocyte culture. The extent of topical delivery of the plasmid using nanoparticle and nanoemulsion formulations was evaluated by measuring IFN-ã levels in CD1, IFN-ã-deficient and Tsk mice. The effect of transgene expression on collagen synthesis was evaluated in Tsk animals by real-time PCR.<p>The <i>in vitro</i> plasmidgeminilipid (PGL) system showed heterogeneous particle size (100-200 nm small particles and 300-600 nm aggregates). Electrostatic interactions between the DNA and PGL systems shifted the negative æ-potential of the DNA (-47 mV) to positive values (30-50 mV). At the same time, condensation of the DNA, and formation of Ø DNA was indicated by the increase of the overall negative signal in the CD spectra, due to the flattening of the 290 nm peak and shift of the 260 nm peak into the negative region in a structure-dependent manner. Lipid organization of the DNADOPE system, in the absence of gemini surfactants, shows hexagonal structure, while addition of gemini surfactant at +/- charge ratio of 10 caused lamellar phase organization. For short spacers (n=3-6), additional Pn3m cubic phase also appear to be present. <p><i> In vitro</i> transfection efficiency in the 12-n-12 series was found to be dependent on the length of the spacer between the two positively charged head groups, with the n=3 spacer showing the highest activity. The PGL systems with 12-3-12 and 12-4-12 led to significantly higher transgene expression compared to the other surfactants of the series. The transfection efficiency significantly correlated with the surface area occupied by one molecule (a). The effect of the tail length influenced the transfection efficiency, with longer tails being associated with higher protein expression. The highest <i>in vitro</i> transfection efficiency was recorded with the 18:1-3-18:1 surfactant (1.4±0.3 ng/5x10E4 cells). <p><i>In vivo</i>, high levels of IFN-ã expression were detected in the skin of animals treated with both nanoparticle (359±239 pg/cm2) and nanoemulsion (607±411 pg/cm2) formulations compared to topical naked DNA (136±125 pg/cm2). IFN-ã levels in the skin of animals injected with 5 ìg DNA were 256±130 pg/cm2. IFN-ã levels in the lymph nodes were higher for the nanoparticle formulation (433±456 pg/animal) compared to nanoemulsion (131±136 pg/animal) suggesting different delivery pathway of the two formulations.<p>IFN-ã expression was at high levels in the skin of Tsk mice after 4-day and 20-day treatments (472±171 and 345±276 pg/cm2). Both 4-day and 20-day treatments reduced the procollagen type I á1 mRNA levels for the topical treatment (64 and 70% reduction) and intradermal injection (58 and 72% reduction). Intercellular adhesion molecule-1 (ICAM-1) was upregulated by 50% in both topically treated and injected animals after 20-day treatment. <p>Here, it has been demonstrated that cationic gemini surfactant-based delivery systems are able to transfect epidermal cells <i>in vivo</i>, and the transgene IFN-ã expression is sufficient to cause significant reduction of collagen in an animal model of scleroderma. It has been shown for the first time that topical gene therapy is a feasible approach for the modulation of excessive collagen synthesis in scleroderma-affected skin.
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Gemini cationic surfactant-based delivery systems for non-invasive cutaneous gene therapyBadea, Ildiko 01 June 2006 (has links)
Gene transfer represents an important advance in the treatment of both genetic and acquired diseases. Topical gene therapy involves administration of the genetic material onto the surface of skin and mucosal membranes. Cationic gemini surfactants (m-s-m, where m represents the carbon atoms in the alkyl tail and s represents the carbon atoms in the spacer) are a novel category of delivery agents with especially high potential for polynucleotides. This is due to their structural versatility, ability to bind and condense DNA, and relatively low toxicity. <p>The objectives were to design, construct and characterize a cationic, non-viral gemini surfactant-based delivery system for an IFN-ã coding plasmid suitable for cutaneous gene therapy and to evaluate this novel therapeutic approach in a Tsk (tight-skin scleroderma) mouse model to determine its clinical feasibility. <p>The delivery systems were characterized by microscopy, dynamic light scattering (DLS), circular dichroism (CD) and small angle X-ray scattering (SAXS). <i>In vitro</i> gene expression was evaluated in PAM 212 keratinocyte culture. The extent of topical delivery of the plasmid using nanoparticle and nanoemulsion formulations was evaluated by measuring IFN-ã levels in CD1, IFN-ã-deficient and Tsk mice. The effect of transgene expression on collagen synthesis was evaluated in Tsk animals by real-time PCR.<p>The <i>in vitro</i> plasmidgeminilipid (PGL) system showed heterogeneous particle size (100-200 nm small particles and 300-600 nm aggregates). Electrostatic interactions between the DNA and PGL systems shifted the negative æ-potential of the DNA (-47 mV) to positive values (30-50 mV). At the same time, condensation of the DNA, and formation of Ø DNA was indicated by the increase of the overall negative signal in the CD spectra, due to the flattening of the 290 nm peak and shift of the 260 nm peak into the negative region in a structure-dependent manner. Lipid organization of the DNADOPE system, in the absence of gemini surfactants, shows hexagonal structure, while addition of gemini surfactant at +/- charge ratio of 10 caused lamellar phase organization. For short spacers (n=3-6), additional Pn3m cubic phase also appear to be present. <p><i> In vitro</i> transfection efficiency in the 12-n-12 series was found to be dependent on the length of the spacer between the two positively charged head groups, with the n=3 spacer showing the highest activity. The PGL systems with 12-3-12 and 12-4-12 led to significantly higher transgene expression compared to the other surfactants of the series. The transfection efficiency significantly correlated with the surface area occupied by one molecule (a). The effect of the tail length influenced the transfection efficiency, with longer tails being associated with higher protein expression. The highest <i>in vitro</i> transfection efficiency was recorded with the 18:1-3-18:1 surfactant (1.4±0.3 ng/5x10E4 cells). <p><i>In vivo</i>, high levels of IFN-ã expression were detected in the skin of animals treated with both nanoparticle (359±239 pg/cm2) and nanoemulsion (607±411 pg/cm2) formulations compared to topical naked DNA (136±125 pg/cm2). IFN-ã levels in the skin of animals injected with 5 ìg DNA were 256±130 pg/cm2. IFN-ã levels in the lymph nodes were higher for the nanoparticle formulation (433±456 pg/animal) compared to nanoemulsion (131±136 pg/animal) suggesting different delivery pathway of the two formulations.<p>IFN-ã expression was at high levels in the skin of Tsk mice after 4-day and 20-day treatments (472±171 and 345±276 pg/cm2). Both 4-day and 20-day treatments reduced the procollagen type I á1 mRNA levels for the topical treatment (64 and 70% reduction) and intradermal injection (58 and 72% reduction). Intercellular adhesion molecule-1 (ICAM-1) was upregulated by 50% in both topically treated and injected animals after 20-day treatment. <p>Here, it has been demonstrated that cationic gemini surfactant-based delivery systems are able to transfect epidermal cells <i>in vivo</i>, and the transgene IFN-ã expression is sufficient to cause significant reduction of collagen in an animal model of scleroderma. It has been shown for the first time that topical gene therapy is a feasible approach for the modulation of excessive collagen synthesis in scleroderma-affected skin.
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Development of Amino acid-Substituted Gemini Surfactant-Based Non-invasive Non-Viral Gene Delivery Systems2013 August 1900 (has links)
Gemini surfactants are versatile gene delivery agents because of their ability to bind and compact DNA and their low cellular toxicity. The aim of my dissertation work was to develop non-invasive mucosal formulations of novel amino acid-substituted gemini surfactants with the general chemical formula C12H25(CH3)2N+-(CH2)3-N(AA)-(CH2)3-N+(CH3)2-C12H25 (AA= glycine, lysine, glycyl-lysine, lysyl-lysine). These compounds were formulated with a model plasmid DNA, encoding for interferon-γ and green fluorescent protein, in the presence of helper lipid, 1,2 dioleyl-sn-glycero-phosphatidyl-ethanolamine. Formulations were assessed in Sf 1 Ep epithelial cells. Among the novel compounds, plasmid/gemini/lipid (P/G/L) nanoparticles formulated using glycine- and glycyl-lysine substituted gemini surfactants achieved significantly higher gene expression than the parent unsubstituted compound.
The key physicochemical properties, e.g. size, surface charge, DNA binding, and toxicity of P/G/L complexes were correlated with transfection efficiency. The presence of amino-acid substitution did not interfere with DNA compaction and contributed to an overall low toxicity of all P/G/L complexes, comparable to the parent gemini surfactant.
A cellular uptake mechanistic study revealed that both clathrin- and caveolae-mediated uptake were major uptake routes for P/G/L nanoparticles. However, amino acid substitution in the gemini surfactant imparted high buffering capacity, pH-dependent increase in particle size, and balanced DNA binding properties. These properties may enhance endosomal escape of P/12-7NGK-12/L resulting in higher gene expression.
Finally, the P/G/L complexes were incorporated into an in-situ gelling dispersion containing a thermosensitive polymer, poloxamer 407, and a permeation enhancer, diethylene glycol monoethyl ether (DEGEE). A 16% w/v poloxamer concentration produced a dispersion that gelled at body temperature and exhibited sufficient yield value to prevent formulation leakage from the vaginal cavity. The formulations were prepared with a model plasmid, encoding for red fluorescent protein, and administered topically to rabbit vagina. In agreement with our in vitro results, confocal microscopy revealed that glycyl-lysine substituted gemini surfactant exhibited higher gene expression compared to the parent unsubstituted gemini surfactant. This provided proof-of-concept for use of amino acid-substituted gemini surfactant in non-invasive mucosal (vaginal) gene delivery systems with potential therapeutic applications.
These formulations will be developed with therapeutically relevant genes to assess their potential as genetic vaccines. In addition, new gemini surfactants will be developed by grafting other amino acids via glycine linkage to retain conformation flexibility and enhance endosomal escape of DNA complexes for higher transfection efficiency.
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Optimized Production and Purification of LCC DNA Minivectors for Applications in Gene Therapy and Vaccine DevelopmentSum, Chi Hong 21 January 2014 (has links)
Linear covalently closed (LCC) DNA minivectors serve to be superior to conventional circular covalently closed (CCC) plasmid DNA (pDNA) vectors due to enhancements to both transfection efficiency and safety. Specifically, LCC DNA minivectors have a heightened safety profile as insertional mutagenesis is inhibited by covalently closed terminal ends conferring double-strand breaks that cause chromosomal disruption and cell death in the low frequency event of chromosomal integration. The development of a one-step, E. coli based in vivo LCC DNA minivector production system enables facile and efficient production of LCC DNA minivectors referred to as DNA ministrings. This novel in vivo system demonstrates high versatility, generating DNA ministrings catered to numerous potential applications in gene therapy and vaccine development.
In the present study, numerous aspects pertaining to the generation of gene therapeutics with LCC DNA ministrings have been explored with relevance to both industry and clinical settings. Through systematic assessment of induction duration, cultivation strategy, and genetic/chemical modifications, the novel in vivo system was optimized to produce high yields of DNA ministrings at ~90% production efficiency. Purification of LCC DNA ministrings using anion exchange membrane chromatography demonstrated rapid, scalable purification of DNA vectors as well as its potential in the separation of different DNA isoforms. The application of a hydrogel-based strong Q-anion exchange membrane, with manipulations to salt gradient, constituted effective separation of parental supercoiled CCC precursor pDNA and LCC DNA. The resulting DNA ministrings were employed for the generation of 16-3-16 gemini surfactant based synthetic vectors and comparative analysis, through physical characterization and in vitro transfection assays, was conducted between DNA ministring derived and CCC pDNA derived lipoplexes. Differences in DNA topology were observed to induce differences in particle size and DNA protection/encapsulation upon lipoplex formation. Lastly, the in vivo DNA minivector production system successfully generated gagV3(BCE) LCC DNA ministrings for downstream development of a HIV DNA-VLP (Virus-like particle) vaccine, thus highlighting the capacity of such system to produce DNA ministrings with numerous potential applications.
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Formação de Agregados de Líquidos Iônicos Dicatiônicos Derivados do Imidazolíneo em Água / Aggregate Formation of Ionic Liquid type Gemini Imidazolium in WaterGindri, Izabelle de Mello 16 May 2013 (has links)
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / This paper presents the study of influence of molecular structure of ionic liquid-type Gemini imidazolium ìn the formation of aggregates in aqueous solution. The aggregation behavior was investigated through differential scanning calorimetry, conductivity, surface tension, fluorescence, dynamic light scattering techniques and transmission electron microscopy. Among the obtained data, it is possible to highlight the critical aggregation concentration (cac) determination, that is, a concentration range where a variation in physical and chemical properties of the solution emerging from the formation of aggregates can be observed. Differential scanning calorimetry showed that the aggregation can be detected by means of thermal events, characteristics of pure LI. Through the conductivity, it was possible to determine thermodynamic parameters, as the aggregate free energy (ΔG°a), the binding degree of the counterion to the aggregate (α), and the process equilibrium constant (Ka). Surface tension measurements provided data regarding the activity of the surfactant LI studied, while fluorescence, dynamic light scattering and transmission electron microscopy were important to obtain information on the aggregates' size. Critical packing parameter was determined throughout data obtained from X-ray diffraction and surface tension. This parameter allowed the prediction of LI micellar form currently in study.
It was observed that the values of cac determined by the methods employed are consistent with each other and it was found that the increase of the carbon chain used as a spacer group promoted the aggregates formation, as well as caused an improvement in the surfactant LI properties. / Este trabalho apresenta o estudo da influência da estrutura molecular dos líquidos iônicos (LI) dicatiônicos derivados do imidazolíneo na formação de agregados em solução aquosa. O comportamento de agregação foi investigado pelas técnicas de calorimetria exploratória diferencial, condutividade, tensão superficial, fluorescência, espalhamento de luz dinâmico e microscopia eletrônica de transmissão. Dentre os dados obtidos, destaca-se a determinação da concentração de agregação crítica, que trata-se de uma faixa de concentração onde pode ser observado a variação nas propriedades físicas e químicas da solução emergente da formação de agregados. Por calorimetria exploratória diferencial observou-se que a agregação pode ser detectada por meio de eventos térmicos característicos dos LI puros. Através da condutividade foi possível determinar parâmetros termodinâmicos como a energia livre de agregação (ΔG°a), grau de ligação do contraíon ao agregado (α) e constante de equilíbrio do processo (Ka). As medidas de tensão superficial forneceram dados a respeito da atividade tensoativa dos LI em estudo enquanto que a fluorescência, espalhamento de luz dinâmico e microscopia eletrônica de transmissão foram importantes para obter informações a sobre o tamanho dos agregado. O parâmetro de empacotamento crítico foi determinado, para isto utilizou-se dados provenientes da difratometria de raios-X e tensão superficial. Este parâmetro possibilitou a previsão da forma micelar para os LI em estudo.
Foi observado que os valores de cac determinados pelos métodos empregados são concordantes entre si e verificou-se que o aumento da cadeia carbônica utilizada como grupo espaçador tanto favoreceu a formação dos agregados como também provocou uma melhora nas propriedades tensoativas dos LI.
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Komunikační strategie NASA během vesmírných programů Mercury, Gemini a Apollo v letech 1958-1972 / Communication strategy of NASA during space programs Mercury, Gemini and Apollo in the years 1958 - 1972Dorňáková, Nikol January 2017 (has links)
Master's thesis "Communication strategy of NASA during space programs Mercury, Gemini and Apollo space programs in 1958-1972" is a summary of the work of National Aeronautics and Space Administration (NASA) in the field of external communications. This diploma thesis maps the communication strategy during the first space programs Mercury, Gemini and Apollo in the 50s-70s. of the 20th century. It also puts it in a wider historical, social and media context. It is also devoted to the emergence of NASA, to individual programs and the emergence of space interest in the United States.
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Comparative Analysis of ChatGPT-4and Gemini Advanced in ErroneousCode Detection and CorrectionSun, Erik Wen Han, Grace, Yasine January 2024 (has links)
This thesis investigates the capabilities of two advanced Large Language Models(LLMs) OpenAI’s ChatGPT-4 and Google’s Gemini Advanced in the domain ofSoftware engineering. While LLMs are widely utilized across various applications,including text summarization and synthesis, their potential for detecting and correct-ing programming errors has not been thoroughly explored. This study aims to fill thisgap by conducting a comprehensive literature search and experimental comparisonof ChatGPT-4 and Gemini Advanced using the QuixBugs and LeetCode benchmarkdatasets, with specific focus on Python and Java programming languages. The re-search evaluates the models’ abilities to detect and correct bugs using metrics suchas Accuracy, Recall, Precision, and F1-score.Experimental results presets that ChatGPT-4 consistently outperforms GeminiAdvanced in both the detection and correction of bugs. These findings provide valu-able insights that could guide further research in the field of LLMs.
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