Actin stress fibers (SFs) are mechanosensitive structural elements that respond to applied strain to regulate cell morphology, signal transduction, and cell function. The purpose of this dissertation is to elucidate the effects of mechanical stretch on cell mechanobiology via the following three aims. First, a sarcomeric model of SFs was developed to describe the role of actomyosin crossbridge cycling in SF tension regulation and reorientation in response to various modes of stretch. Using model parameters extracted from literature, this model described the dependence of cyclic stretch-induced SF alignment on a two-dimensional (2-D) surface on positive perturbations in SF tension caused by the rate of lengthening, which was consistent with experimental findings. Second, the sarcomeric model was used to predict how stretch-induced pro-inflammatory mechanotransduction depends on the mode of strain application. Together with experimental data, the results indicated that stretch-induced stress fiber alignment, MAPK activations and downstream pro-inflammatory gene expressions are dependent on SF strain rate (and related changes in SF tension) rather than SF turnover. Third, to produce biocompatible materials that are both mechanically resilient under (physiological) load and also mechanosensitive, a novel hybrid engineered tissue was developed that transmits strain stimuli to cells residing in three-dimensional (3-D) collagen microspheres. However, the macroscopic stress is largely borne by a more resilient acellular polyethylene glycol diacrylate (PEGDA) hydrogel supporting the microspheres. Careful analysis indicated that cell alignment occurs prior to significant collagen fibril alignment.

Noonan spectrum disorders belong to the RASopathies, a group of clinically related developmental disorders caused by dysregulation of the RAS-MAPK pathway. This thesis describes genetic and clinical investigations of six families with Noonan spectrum disorders. In the first family, the index patient presented with severe Noonan syndrome (NS) and multiple café-au-lait (CAL) spots, while four additional family members displayed multiple CAL spots only. Genetic analysis of four RAS-MAPK genes revealed a de novo PTPN11 mutation and a paternally inherited NF1 mutation, which could explain the atypically severe NS, but not the CAL spots trait in the family. The co-occurrence of two mutations was also present in another patient with a severe/complex NS-like phenotype. Genetic analysis of nine RASopathy-associated genes identified a de novo SHOC2 mutation and a maternally inherited PTPN11 mutation. The latter was also identified in her brother. Both the mother and the brother displayed mild phenotypes of NS. The results from these studies suggest that an additive effect of co-occurring mutations contributes to severe/complex NS phenotypes. The inherent difficulty in diagnosing Noonan spectrum disorders is evident in families with neurofibromatosis-Noonan syndrome (NFNS). An analysis of nine RASopathy-associated genes in a five-generation family with NFNS revealed a novel NF1 mutation in all affected family members. Notably, this family was initially diagnosed with NS and CAL spots. The clinical overlap between NS and NFNS was further demonstrated in three additional NFNS families. An analysis of twelve RASopathy-associated genes revealed three different NF1 mutations, all segregating with the disorder in each family. These mutations have been reported in patients with NF1, but have, to our knowledge, not been associated with NFNS previously. Together, these findings support the notion that NFNS is a variant of NF1. Due to the clinical overlap between NS and NFNS, we propose screening for NF1 mutations in NS patients negative for mutations in NS-associated genes, preferentially when CAL spots are present. In conclusion, this thesis suggests that co-occurrence of mutations or modifying loci in the RAS-MAPK pathway contributes to the clinical variability observed within Noonan spectrum disorders and further demonstrates the importance of accurate genetic diagnosis.

Heart failure induced by cardiac hypertrophy is a cause of high mortality in the world and has been the fastest growing cardiovascular disease over the past decade. Cardiac hypertrophy is characterised as a reactive increase in cardiac mass growth with a complex of ventricular remodelling. It occurs initially as a compensatory response to an increased workload but eventually leads to cardiac dysfunction. An in-depth understanding of cardiac hypertrophy and the capacity to regulate it has profound clinical implications. The MAPK pathways provide an important connection between external stimuli and intracellular signals for cardiac hypertrophic response. At least four MAPK subfamilies have been identified: extracellular-regulated protein kinases 1 and 2 (ERK1/2), ERK5, c-Jun NH2-terminal protein kinases (JNKs) and p38 MAPKs. Mitogen-activated protein kinase kinase 4 (MKK4), a vital activator of JNK and p38 is implicated as an important mediator of hypertrophy. ERK5, an atypical MAPK, is also involved in both hypertrophic growth and cardiomyocyte survival. However, conflicting data have been yielded from previously-published studies, since the results are based entirely on experiments conducted in cultured cardiomyocytes or transgenic and conventional knockout mouse models. To elucidate their biological roles and underlying signalling mechanisms in hypertrophy, mice with a cardiomyocyte-specific deletion of MKK4 or ERK5 (MKK4cko and ERK5cko mice) were generated in the present study. In response to pathological hypertrophic stresses including pressure overload or isoprenaline stimulation, MKK4cko mice developed exacerbated pathological hypertrophy with increased cardiomyocyte apoptosis, impaired cardiac function and remarkably upregulated NFAT (nuclear factor of T-cell) transcriptional activity. However, MKK4cko mice exhibited a similar extent of swimming exercise-induced physiological hypertrophy compared with the controls. In response to pathological hypertrophic stimuli, ERK5cko mice were resistant to hypertrophic growth, foetal gene induction and ventricular fibrosis, which is associated with repressed activation of MEF2 (myocyte enhancer factor 2). ERK5 deficiency also caused a profound increase in cardiomyocyte apoptosis which accounted for the impaired cardiac function. In conclusion, the present study provides biological evidence that clarifies in vivo functions of MKK4 and ERK5 in hypertrophy. MKK4 acts a protective role against pathological hypertrophy through inhibiting NFAT signalling, but it is not necessary for the regulation of physiological hypertrophy. ERK5 is essential for pathological hypertrophic remodelling and cardiomyocyte survival and its function in hypertrophic remodelling is mediated through regulation of MEF2 activity. Taken together, these data presented in my thesis advances knowledge about biological functions of MAPK pathways in the heart.

Osteoblasts are highly active cells that are responsible for secreting bone forming components such as collagen type I and matricellular proteins that mediate collagen deposition and mineralisation. SPARC and osteopontin are matricellular proteins that are involved in bone regulation and cell-matrix interactions and are also upregulated in metastatic disease. Secretion of these proteins results in changes to the stromal environment that includes cell migration, angiogenesis, matrix degradation, matrix deposition, bone mineralisation and bone resorption. Signalling pathways not only lead to the expression of target proteins, but also have immediate early effects, for example, on cell adhesion. We asked if the ERK 1 and 2 module of the MAPK pathway was involved in the intracellular trafficking of SPARC and Osteopontin. Membrane trafficking is an essential process that ensures newly synthesised proteins pass from their site of synthesis to the extracellular environment. Using an inhibitor of ERK 1 and 2 activation (U0126), as well as siRNA directed against ERK 1 or 2 individually, a change in intracellular localisation of SPARC and osteopontin was observed in cells treated with U0126 and siRNA against ERK 2 alone, likely in or around the Golgi apparatus. Consistent with the observation above, analysis of protein secretion showed that there was a reduction of total protein secreted (30% reduction) when ERK 1 and 2 activation was prevented together or knock down of ERK 2 alone. A mechanism is proposed where ERK 2 is likely activating a substrate that is allowing SPARC and osteopontin to continue along the secretory pathway. This directly implicates ERK 2 as an important regulator of matricellular protein secretion in osteoblasts. In cancer, Ras mutations can lead to permanent activation of the MAPK pathway leading to cancer cell proliferation and survival, however, we propose another mechanism important in metastasis whereby ERK 2 activation is manipulated to facilitate secretion of matricellular proteins which can then mediate changes to the stromal environment that allow the tumour to metastasise successfully.

abstract: In somatic cells, the mitotic spindle apparatus is centrosomal and several isoforms of Protein Kinase C (PKC) have been associated with the mitotic spindle, but their role in stabilizing the mitotic spindle is unclear. Other protein kinases such as, Glycogen Synthase Kinase 3â (GSK3â) also have been shown to be associated with the mitotic spindle. In the study in chapter 2, we show the enrichment of active (phosphorylated) PKCæ at the centrosomal region of the spindle apparatus in metaphase stage of 3T3 cells. In order to understand whether the two kinases, PKC and GSK3â are associated with the mitotic spindle, first, the co-localization and close molecular proximity of PKC isoforms with GSK3â was studied in metaphase cells. Second, the involvement of inactive GSK3â in maintaining an intact mitotic spindle was shown. Third, this study showed that addition of a phospho-PKCæ specific inhibitor to cells can disrupt the mitotic spindle microtubules. The mitotic spindle at metaphase in mouse fibroblasts appears to be maintained by PKCæ acting through GSK3â. The MAPK pathway has been implicated in various functions related to cell cycle regulation. MAPKK (MEK) is part of this pathway and the extracellular regulated kinase (ERK) is its known downstream target. GSK3â and PKCæ also have been implicated in cell cycle regulation. In the study in chapter 3, we tested the effects of inhibiting MEK on the activities of ERK, GSK3â, PKCæ, and á-tubulin. Results from this study indicate that inhibition of MEK did not inhibit GSK3â and PKCæ enrichment at the centrosomes. However, the mitotic spindle showed a reduction in the pixel intensity of microtubules and also a reduction in the number of cells in each of the M-phase stages. A peptide activation inhibitor of ERK was also used. Our results indicated a decrease in mitotic spindle microtubules and an absence of cells in most of the M-phase stages. GSK3â and PKCæ enrichment were however not inhibited at the centrosomes. Taken together, the kinases GSK3â and PKCæ may not function as a part of the MAPK pathway to regulate the mitotic spindle. / Dissertation/Thesis / Ph.D. Molecular and Cellular Biology 2012

Thèse numérisée par la Direction des bibliothèques de l'Université de Montréal.

O Mal de Alzheimer (MA) foi caracterizado pela primeira vez em 1907 pelo neuropatologista alemão Alois Alzheimer, tendo como sintomas clínicos disfunções cognitivas, fisiológicas, comportamentais, perda de memória, e eventualmente incontinência, demência, acamação e morte. É uma doença neurodegenerativa do sistema nervoso central que costuma afetar, principalmente, indivíduos em faixa etária mais avançada. Este mal é caracterizado microscopicamente pela presença de placas amilóides, que são acúmulos da proteína betaamilóide inter-neurônios, e emaranhados neurofibrilares, formados predominantemente por formas altamente fosforiladas de uma proteína associada aos microtúbulos, Tau, as quais formam massas emaranhadas que consomem o corpo celular neuronal, possivelmente levando à disfunção neuronal e finalmente à morte. MAPK p38? tem sido implicada em dois eventos associados ao MA, fosforilação da Tau e inflamação. MAPK p38? é ativada por uma via de fosforilação dupla em Thr180 e Tyr182. O planejamento de fármacos inibidores de p38? é principalmente focado em pequenas moléculas que competem pelo sítio catalítico do ATP. Aqui, nós utilizamos diferentes técnicas de modelagem molecular e planejamento racional baseado em estrutura e ligantes, tendo como base os inibidores da MAPK p38? descritos na literatura, além das estruturas depositadas no PDB. Como resultado das diferentes abordagens de triagens virtuais utilizadas neste trabalho, tais como \"docking\", farmacóforo, dinâmica molecular, campos de interação molecular, predição de atividade e toxicidade, cálculo de propriedades farmacocinéticas e físico-químicas, foi selecionado um total de 14 compostos que atendem aos critérios adotados de baixa ou nenhuma toxicidade potencial, bom perfil farmacoterapêutico predito, atividades calculadas em valores comparáveis aos obtidos para os compostos de referência, além da manutenção das principais interações observadas para os inibidores mais potentes. Estes compostos podem ser adquiridos para estudos de inibição in vitro frente à enzima MAPK p38?, contribuindo assim na busca de um potencial candidato à fármaco no tratamento do Mal de Alzheimer. / Alzheimer\'s disease (AD) was first characterized in 1907 by the German neuropathologist Alois Alzheimer, whose clinical symptoms includes cognitive, physiological and behavioral dysfunctions, memory loss, eventually incontinence, dementia, and death. It is a neurodegenerative disease of the central nervous system that usually affects individuals group in older age. This is characterized microscopically by the presence of amyloid plaques, which are accumulations of beta-amyloid protein inter-neurons, and neurofibrillary tangles formed predominantly by highly phosphorylated forms of the microtubule-associated protein, tau, which form tangled masses that consume neuronal cell body, possibly leading to neuronal dysfunction and ultimately death. p38? MAPK has been implicated in both events associated with AD, tau phosphorylation and inflammation. p38? MAPK pathway is activated by a dual phosphorylation at Thr180 and Tyr182 residues. The drug design of p38? MAPK inhibitors is mainly focused on small molecules that compete for ATP in the catalytic site. Here, we used different techniques of molecular modeling based on p38? MAPK structure deposited in the PDB and its inhibitors described in the literature. As a result of different virtual screening approaches used in this work, such as \"docking\", pharmacophore, molecular dynamics, molecular interaction fields, activity and toxicity predictions assays, pharmacokinetic properties and physicochemical, was selected a total of 14 compounds that meet these criteria of low or no toxicity potential, good pharmacotherapeutic profile, predicted activities calculated values comparable to those obtained for the reference compounds, while maintaining the main interactions observed for the most potent inhibitors. These compounds should be acquired for in vitro inhibition studies against the enzyme p38? MAPK, thereby helping in the search of a potential drug candidate for the treatment of Alzheimer\'s disease.

The field of systems biology has become very popular as a means to deal with cancer as well as other complex biological issues. It enables scientists to gain an insight into difficult conditions through mathematical approaches that have been developed. Prostate cancer is the second leading cause of death among men after skin cancer and its heterogeneity makes it a complex disease. In this study we focus on three pathways known to play crucial roles in the formation of prostate cancer. By using a mathematical model that combines all of them we describe the interactions taking place during signal transduction in the prostate under normal and cancer conditions.

L'expression élevée de la GSTP1 est fréquemment observée dans les cancers et est positivement corrélée à la résistance aux chimiothérapies. Cette enzyme de détoxication de phase II peut aussi réguler l'activité de protéines comme JNK et TRAF2 et, par conséquent, peut moduler les voies de prolifération et de mort cellulaire. Ce projet a donc consisté à étudier le rôle de la GSTP1 dans la prolifération des hépatocytes normaux ou transformés. L'étude de la régénération hépatique chez des souris Gstp1/2‐/‐ a permis de démontrer le rôle des protéines GSTP1 et GSTP2 dans le contrôle de la progression des hépatocytes normaux dans le cycle cellulaire. Après hépatectomie partielle chez les souris Gstp1/2‐/‐, une diminution importante du nombre d'hépatocytes dans les phases S, G2 et M est observée comparativement à des foies de souris contrôle. Cette réduction est associée à des retards d'expression de protéines impliquées dans l'initiation de la prolifération, le contrôle du point de restriction dépendant des mitogènes et dans la transition G1/S. Ces modifications sont associées à une réduction de l'expression de TRAF2 et de l'activation de JNK et ERK, alors que les taux de p21 et de p53 sont élevés. Parallèlement, un décalage dans l'expression d'enzymes qui régulent l'homéostasie redox et participent à l'activation des MAPK est observé. L'utilisation de cellules cancéreuses de différentes origines dont le foie, a également permis de corréler l'absence de GSTP1 à une diminution de prolifération cellulaire sans altération de la suivie cellulaire. Cependant dans ces conditions, nous observons une augmentation de l'expression de TRAF2, pJNK, pATF2, ATF3 associée à une induction de p21. Nous avons également montré que les effets de la GSTP1 sur la prolifération cellulaire sont régulés par l'activation de JNK. L'évidence du lien entre l'expression de la GSTP1 et la prolifération hépatocytaire nous a conduit à analyser l'expression d'enzymes de détoxication dans des carcinomes hépatocellulaires (CHC) et nous avons constaté une induction d'expression de GSTP1 dans le tissu péritumoral des CHC par rapport au foie normal. / Increased GSTP1 expression is frequently observed in cancers and is positively correlated with chemotherapy resistance. This phase II detoxifying enzyme can also regulate JNK and TRAF2 activities and, consequently, can modulate proliferation and cell death pathways. This project aimed at studying the role of GSTP1 during proliferation in normal and transformed hepatocytes. Liver regeneration study in Gstp1/2‐/‐ mice showed the involvement of GSTP1 and GSTP2 proteins in the cell cycle progression control of normal hepatocytes. After partial hepatectomy in Gstp1/2‐/‐ mice, the number of cells in S, G2 and M phases was decreased compared to livers of wildtype mice. This reduction is associated with the delay in the expression of proteins involved in proliferation initiation, mitogen restriction point control and G1/S transition. These modifications are associated with the decrease in TRAF2 expression and the activation of JNK and ERK, whereas p21 and p53 levels are high. Furthermore, expression of enzymes involved in redox homeostasis and MAPK activation is delayed. Study of cells derived from various cancers, including HCC, highlighted a correlation between low expression of GSTP1 and decrease in cell proliferation without cell survival alteration. However in these conditions, we observed the increase in TRAF2, pJNK, pATF2 and ATF3 expression together with the induction of p21. We also showed that GSTP1 effects are regulated by JNK activation. These results showed a link between GSTP1 expression and hepatocyte proliferation and led us to investigate the GSTP1 expression in HCC. We noticed an induction of GSTP1 expression in peritumoral tissue compared to normal liver.

IL-12, an immunoregulatory cytokine, plays a key role in the development of cell-mediated immune responses. However, very little is known about the regulation and induction of the other members of this family, particularly IL-23 and IL-27. The regulation of these cytokines was studied in the human primary monocytes and monocyte-derived macrophages (MDMs) as they play a key role in innate and adaptive immune responses. THP-1 promonocytic cells were employed as a model system to confirm the results obtained with monocytes and MDMs. Two stimuli IFN-γ and LPS were used as both are strong inducers of IL-12 family cytokines. My results show that IFN-γ induced the production of IL-12/23p40 and IL-23p19 mRNA as well as IL-12p40 and IL-23 proteins in primary human monocytes isolated by positive selection. IFN-γ-induced IL-23 and IL-12/23p40 expression was positively regulated by the p38 mitogen-activated protein kinases (MAPK), independent of the Janus kinase (Jak)/signal transducers and activators of transcription (STAT) signaling. In contrast, IL-12 and IL-23 were negatively regulated by the Jak/STAT, phosphoinositide-3 kinase (PI3K) and the c-Jun-N-terminal kinase (JNK) MAPKs in IFN-γ-stimulated monocytes. LPS significantly stimulated IL-23p19 and IL-12/23p40 mRNA expression as well as IL-12/23p40 and IL-23 protein production in THP-1 cells, while IFN-γ stimulation alone did not affect IL-23 mRNA or protein levels. THP-1 cells were pre-treated with ERK, JNK or p38 MAPK inhibitors and then stimulated with LPS. LPS-induced IL-12p40 and IL-23 proteins were positively regulated by the p38 and JNK MAPKs and PI3K, whereas LPS-induced IL-23p19 mRNA expression was negatively regulated by these kinases. These results were confirmed using siRNA in LPS-stimulated THP-1 cells. My results also show that IFN-γ/LPS-induced IL-23 expression is not regulated through MAPK or PI3K signaling pathways in human MDMs. My results also show for the first time that IFN-γ alone without any second stimulus induced IL-27p28 gene expression and IL-27 protein production in human monocytic cells. I investigated the signalling pathways governing the regulation of IL-27 protein and its subunit IL-27p28 following stimulation with IFN-γ in primary human monocytic cells. IFN-γ-mediated IL-27 protein, but not IL-27p28 gene expression was positively regulated by JNK MAPK and PI3K, independent of JAK/STAT signaling in primary human monocytes. I also investigated the signalling pathways governing the regulation of IL-27 and its α subunit, IL-27p28 following stimulation with IFN-γ alone or IFN-γ-primed LPS-stimulated macrophages (IFN-γ/LPS) and THP-1 cells. A differential regulation of IL-27p28 and IL-27 in response to stimulation by either IFN-γ or IFN-γ/LPS was observed. IFN-γ- and IFN-γ/LPS induced IL-27 expression was positively regulated by the JNK, p38 MAPK and PI3K, independent of Jak/STAT signaling in human MDMs and THP-1 cells. Taken together, my results show that IL-23 induction is differentially regulated by different pathways in response to different stimuli, whereas IL-27 expression is regulated by JNK, p38 MAPK and PI3K regardless in the stimulus in human myeloid cells. These results may provide additional strategies aimed at targeting disease, autoimmune disorders and cancer.