The thick shelled river mussel (Unio crassus) has a fragmented distribution in southern Sweden. It is a threatened and protected species. In both the Swedish red list and the IUCN Red List of Threatened Species Unio crassus is classified as Endangered (EN). Causes for this classification are for instance differentiated bottom substrate and deterioration in water quality. In this study, habitat preferences of Unio crassus were investigated to assist in future restoration work. The environmental parameters that were used to characterize the habitat in sites with or without Unio crassus were water depth, bottom substrate, water velocity, slope, and shading. In this thesis I focused in bottom substrate and water velocity. Sites with Unio crassus had finer bottom substrate and lower water velocity than sites without (t>2.54, p<0.05, t-test). Most of the sites with Unio crassus had a bottom substrate with a size <4 mm and a water velocity around 0.3-0.5 m/s. These two variables were correlated with each other. When the water velocity was higher, the bottom substrate was coarser. These results are in line with other studies, showing that if the bottom substrate is either too coarse or too fine, it could impact Unio crassus. Too coarse bottom substrate probably results in difficulty in burrowing and too fine most likely results in interfering with respiration and feeding. Earlier studies indicate that the water velocity can have a greater impact on unionids than bottom substrate. Because of the correlation between bottom substrate and water velocity it is not easy to disentangle the importance of each factor.

The thick shelled river mussel (Unio crassus) has a fragmented distribution in southern Sweden. It is a threatened and protected species. In both the Swedish red list and the IUCN Red List of Threatened Species Unio crassus is classified as Endangered (EN). Causes for this classification are for instance differentiated bottom substrate and deterioration in water quality. In this study, habitat preferences of Unio crassus were investigated to assist in future restoration work. The environmental parameters that were used to characterize the habitat in sites with or without Unio crassus were water depth, bottom substrate, water velocity, slope, and shading. In this thesis I focused in bottom substrate and water velocity. Sites with Unio crassus had finer bottom substrate and lower water velocity than sites without (t>2.54, p<0.05, t-test). Most of the sites with Unio crassus had a bottom substrate with a size <4 mm and a water velocity around 0.3-0.5 m/s. These two variables were correlated with each other. When the water velocity was higher, the bottom substrate was coarser. These results are in line with other studies, showing that if the bottom substrate is either too coarse or too fine, it could impact Unio crassus. Too coarse bottom substrate probably results in difficulty in burrowing and too fine most likely results in interfering with respiration and feeding. Earlier studies indicate that the water velocity can have a greater impact on unionids than bottom substrate. Because of the correlation between bottom substrate and water velocity it is not easy to disentangle the importance of each factor.

Shrimp and mussel samples were cleaned, washed and exposed to steam before freezing. HHP treatment was performed at combinations of 200, 220 and 250 MPa at 25, 30, 40 and 50&deg / C for 10 and 20 minutes. Microbial analysis were performed by analyzing the effect of treatments on the microbial reduction in the samples. Based on the results of the microbial reduction, the best combinations of HHP treatments were determined as 250 MPa, 50&deg / C, 10 minute for shrimps and 220 MPa, 50&deg / C, 10 minute for mussels where total microbial inactivation was achieved. Storage analysis was performed on the samples, treated at the selected HHP combinations and stored at room (25&deg / C) and refrigeration temperatures (4&deg / C). For the storage analysis, variations in Total Volatile Bases (TVB-N) and pH were measured. According to the results evaluated, shelf-life of the shrimps were detected as 10 and 16 days for storage at room and refrigeration temperature, respectively as compared to 4 days of untreated sample at 4oC. Similarly shelf-life for the mussel samples were obtained as 12 days for storage at room and 18 day for storage at refrigeration temperature as compared to 4 days of untreated sample at 4oC. HHP-at the studied parameters for shrimps and mussels- can be offered as an alternative method for the preservation of shell-fish instead of conventional frozen food technology, which is currently used in the industry, since it gives the opportunity to handle the samples at lower temperatures for the post-production period resulting in both reduction of energy required and operational costs without sacrificing from the quality as measured by microbial reduction, TVB-N and pH.

Invasive species such as quagga mussel (Dreisseina bugensis) alter native ecosystems around the world. This study uses genetic markers to examine historical lineages for quagga mussels in lakes (reservoirs) of the Colorado River System. Specimens were collected from Lake Mead, Lake Mohave, Lake Pleasant, Lake Havasu, Lower Otay Reservoir, Yuma Area, and two Central Arizona Project pumping stations. Objectives of this project were to perform analyses of genetic variability within populations and determine if relatedness among individuals could resolve whether they originate from a single, or multiple, invasion events and genetically distinguish the populations at each water body. Analyses examined the mitochondrial DNA COI region and eight microsatellite DNA markers. Three populations were characterized in the study area and compelling information gathered about gene flow between them. Results indicate that microsatellite markers are useful to track quagga mussel invasions and provide insights into migration patterns that would otherwise be missed.

The factors influencing habitat selection by juveniles of species within the family Unionidae (i.e., unionids), between post-larval detachment from a fish host and burrowing into the substratum, are largely unknown. Bed shear stress (τw) has been proposed as a critical factor. A laboratory wall jet apparatus generated τw to assess the response of juvenile Epioblasma triquetra, Villosa iris, Lampsilis fasciola, and Ligumia nasuta. The relationships between juvenile unionids, τw, and chemical and physical parameters were also examined in the field. There was a significant relationship between unionid resuspension and τw in the laboratory (resuspension when τw > 0.26 Pa), and adhesion behaviour required greater critical τw. Near-bed velocity and D50 grain size predicted sphaeriid clam density (a proxy for juvenile unionids) in the field. Laboratory experiments confirmed predictions that juvenile unionids cannot establish beyond a critical τw, demonstrating the importance of hydrodynamics in dispersal and for developing unionid conservation measures. / NSERC and Species At Risk Research Fund Ontario (MNR) to J.D.A.

Zebra mussels (Dreissena polymorpha) have invaded a great proportion of the waters of the eastern part of North America. This mollusk may be a useful sentinel species for bioaccumulation of heavy metals and organic contaminants in aquatic ecosystems. The zebra mussel's capacity to bioaccumulate cadmium at environmentally relevant exposure and to sequester metals in metal-binding proteins, metallothioneins, was investigated. Elevated (relative to control) concentrations of Cd$ sp{2+}$ were detected in Dreissena exposed to $ ge$2 $ mu$g Cd/liter suggesting that zebra mussels cannot regulate Cd$ sp{2+}$ of trace exposure concentration. More than 85% of the measured Cd$ sp{2+}$ was bound to metallothioneins. / Lesser scaup (Aythya affinis) was assessed as a model species for potential impacts of zebra mussels on higher trophic levels. The feasibility of incubating and rearing scaup in semi-natural conditions was evaluated. A series of biomarkers was assessed in 3 groups of scaup fed a contaminant-free diet or diets containing zebra mussels from the St-Lawrence River or Lake Erie. / Lesser scaup proved to be a suitable species to raise in captivity providing daily water misting through out incubation and strict hygiene conditions during brooding. A hatching success of 89% was achieved. Appropriate housing, feeding and bathing conditions yielded low (3%) post-hatching mortality. / Phagocytosis and respiratory burst activities of heterophils of scaup were suppressed after 6 weeks of feeding on zebra mussels, compared to the control group. These two heterophilic functions were negatively correlated with the incidence of pododermatitis (bacterial feet infection), suggesting a suppression of the non specific immunity. Increased liver/body mass ratio and decreased hepatic vitamin A (retinol and retinyl palmitate) concentrations were observed in scaups fed zebra mussels. Lipid accumulation and glycogen overload were found in the livers of scaups fed mussels from the St-Lawrence River and the Lake Erie groups, respectively. These immunological, biochemical and histopathological biomarkers show promise for monitoring "early" injury and may help in the understanding of health impairment of different species of waterfowl exposed to xenobiotics via contaminated food sources.

Parasiter kan påverka sina värdar på många olika sätt. Flodpärlmusslans (Margaritifera margaritifera L.) glochidielarver lever inkapslade som parasiter på gälarna hos öring (Salmo trutta L.) i flera månader innan de blir frilevande. Genom experiment i ett strömakvarium har denna studie undersökt hypoteserna att öring med inkapslade gälparasiter tar färre byten, och simmar kortare avstånd när de födosöker än öring utan gälparasiter.   Resultaten visade att infekterad öring tog signifikant färre byten/minut än oinfekterad öring både i början och i slutet av en födosöksperiod under vilken individerna konfronterades med tvåhundra poteniella byten. Vilket visar att infekterad öring har en lägre furageringshastighet är oinfekterad öring. Däremot påvisades ingen skillnad mellan öring med och utan parasiter med avseende på antal byten tagna i förhållande till avstånd från bytet.    Den lägre furageringshastigheten som påvisades hos de infekterade öringarna tyder på att infektion av flodpärlmusslans larver kan ha negativa effekter på fiskarnas tillväxt, och därmed överlevnad. Detta kan bero på faktorer som minskad aktivitet, ökad ventilation och förändringar i beteende hos de infekterade fiskarna, som är en effekt av parasitinfektionen. / Parasites can impact their hosts in many different ways. The larval glochida of freshwater pearl mussels (Margaritifera Margaritifera L.) infect the gills of brown trout (Salmo trutta L.), where they spend several months before becoming free-living. Using stream aquarium experiments, this study investigated the hypotheses that infected trout would capture fewer prey, and would swim less distance to capture prey, than would uninfected trout.   The results showed that infected brown trout caught significantly fewer prey/minute both at the beginning and at the end of a foraging period during which individuals were fed two hundred potential prey. This suggests that infected brown trout have a lower foraging rate than uninfected brown trout. However, no significant difference between infected and uninfected fish was found in terms of the number of prey taken in relation to distance to the prey.   The lower foraging rate for infected brown trout suggests that infection of the freshwater pearl mussel’s glochidia may have negative effects on their growth rate, and consequently survival. This may be due to factors such as reduced activity, increased ventilation and changes in behavior, which are effects from the parasite infection.

Flodpärlmusslan (Margaritifera margaritifera. L) har en obligatorisk fas i sin komplexa livcykel där den lever som parasit på antingen öringens (Salmo trutta, L) eller laxens (Salmo salar, L) gälar. För värdfisken skulle detta kunna innebära en ökad energikostnad när den födosöker i rinnande vatten. Öringens furagering består i att den finner en utgångspunkt (eng. focal point) i strömmen utifrån vilken den fångar sina byten. I denna studie undersöks det om en infektion av flodpärlmusslans glochidielarver på öring påverkar öringens födointag och hantering av födan. Sextio årsungar av öring infekterades med glochidielarver av känd koncentration, och deras födosökning mättes över en 10-veckors period för att bedöma effekten av den växande mussellarven i jämförelse med en icke-infekterad (kontrollgrupp) grupp fiskar. Individuella födoförsök, tio försök per mätningstillfällena, utfördes i ett strömakvarium där en enskild öring matades med drivande föda i fem minuter. Bytet släpptes ned i strömmen med två sekunders intervall, antalet byten räknades och furageringsbeteendet observerades. Födoförsöken genomfördes med två veckors intervall. Vid försöken hittades inga signifikanta skillnader med avseende på: 1) antalet fångade byten, 2) proportionen av fångade byten av försökets första tre minuter, eller 3) de rumsliga aspekterna av öringens utgångspunkt. Vidare uppmättes ingen signifikant effekt av tid på furageringsframgången på den infekterade gruppen jämfört med kontrollgruppen. Däremot var det ett högre antal infekterade individer som spottade ut byten jämfört med kontrollgruppen. Skillnaden i utspottade byten pekar på att infektionen har en negativ påverkan på fiskarnas furageringsförmåga. Dock visade försöken inga resultat som stödjer tidigare studier där signifikant skillnad erhållits med avseende på födointag. Förklaring till detta kan finnas i metodskillnader mellan denna och tidigare studier, inklusive skillnad i typ av byte, strömakvarier, ursprungsström för musslorna och öringen och infektionsgrad hos de infekterade fiskarna samt kontrollgruppen. / The freshwater pearl mussel (Margaritifera margaritifera, L) has a mandatory phase of its complex life cycle where it lives as a parasite on the gills of either trout (Salmo trutta, L) or salmon (Salmo salar, L). For the host fish this could mean an increased cost when it forages in running water. The trout´s foraging consists of finding a focal point in the stream from where it catches its prey. This study examines whether an infection of the freshwater pearl mussel´s glochidium larva on the gills of brown trout affect trout foraging. Sixty juvenile (0+) brown trout were infected with glochidium larva of a known concentration, and trout foraging behaviour was measured over a 10-week period to assess the effects of the growing mussel larvae of the fish compared to non-infected (control) fish.  Individual feeding trials, ten replicates for each session, were conducted in a stream aquarium where a single trout was fed drifting prey for five minutes. The prey were released into the stream every two seconds, the number of prey captured was counted, and the foraging behavior was characterized. Feeding trials were conducted at two-week intervals. No significant differences between the infected and control groups were found for: 1) the number of prey eaten, 2) the proportion of prey eaten during the first three minutes of the trial, or 3) location of the focal points. Furthermore, there was no significant effect of time on foraging success of the infected group compared to the control group. However, there was a higher number of infected individuals who spat out the prey compared with the control group. The difference in rejected prey suggests that the infection has a negative impact on the fish’s foraging ability. However, the results of this experiment do not support previous studies, where a significant difference was obtained with respect to food intake. This might be explained by differences in experimental protocol between this and previous studies, including differences in prey type, stream aquaria, stream origins of mussels and trout, and the infection status of infected and control fish.

Toxic antifouling agents such as tributyltin (TBT) and triphenyltin (TPT) have been released in aquatic ecosystems through the use of antifouling paint applied to ship hulls, pleasure crafts and fish nets. The purpose of this study was to assess the use of zebra mussels (Dreissena polymorpha ) as a biomonitor for investigating the geographical variations of organotin bioavailability along the St. Lawrence River. Organotins TBT and TPT and their degradation products were first measured in the soft tissues of zebra mussels collected from along the River. High concentrations of TBT were found in mussels from Bassin Louise, a marina in Quebec City (1442 ng/g wet weight). TPT concentrations were elevated at 2 sites near Quebec City (252 and 530 ng/g wet weight). A follow-up study assessed the extent of the distribution of organotins from the contaminated marina to the River system by measuring organotin concentrations in zebra mussels and in sediments collected River near Quebec City. The highest concentration of TBT was found in Bassin Louise (1078 ng/g wet weight) and elevated concentrations were found in two other marinas. The concentrations decreased sharply to background levels just outside the marinas. All butyltins were detected in all sediments analysed. There was a significant correlation between TBT in sediments and mussels. These studies suggest that organotin contamination may remain a problem in localized freshwaters in the St. Lawrence River.

Freshwater ecosystems worldwide are being altered by multiple stressors. One of the most important stressors is biological invasion---the introduction of exotic species, which can contribute to the loss of native species. The effects of an introduced species are correlated with its abundance and typically vary across ecosystems, suggesting that its impact on native species is mediated by its environment, i.e. the physical habitat and the recipient community. However, there are few studies that explore the effects of environment on the interactions between exotic and native species. My thesis examines the influence of physical habitat variables and community interactions on the relative abundance of exotic and native freshwater crustaceans in the St. Lawrence River. / The Eurasian amphipod Echinogammarus ischnus invaded the Great Lakes-St. Lawrence River system in the mid-1990s and has replaced the native North American Gammarus fasciatus as the dominant amphipod in littoral areas throughout Lake Erie and Lake Ontario.