Mining activities cause severe disturbance to the soil environment in terms of soil quality and productivity and are of serious concern worldwide. Under South African legislation, developers are required to ecologically rehabilitate damaged environments. The application of agronomic approaches for the rehabilitation of coal discard sites has failed dismally in the arid areas of southern Africa. It is obvious that compliance with mitigation and rehabilitation requirements cannot be enforced without a thorough understanding of the ecological principles that ensure ecological stability and subsequent sustainability of soil ecosystems. Soil micro organisms are crucial role-players in the processes that make energy and nutrients available for recycling in the soil ecosystem. Poor management practices and other negative impacts on soil ecosystems affect both the physical and chemical properties of soil, as well as the functional and structural properties of soil microbial communities. Disturbances of soil ecosystems that impact on the normal functioning of microbial communities are potentially detrimental to soil formation, energy transfers, nutrient cycling, plant reestablishment and long-term stability. In this regard, an extensive overview of soil properties and processes indicated that the use of microbiological and biochemical soil properties, such as microbial biomass, enzymatic activity and the analysis of microbial community structure by the quantification of specific signature lipid biomarkers are useful as indicators of soil ecological stress or restoration properties because they are more responsive to small changes than physical and chemical characteristics. In this study, the relationship between the physical and chemical characteristics and different biological indicators of soil quality in the topsoil covers of seven coal discard sites under rehabilitation in South Africa, as well as three reference sites was investigated. Through the assimilation of basic quantitative data and the assessment of certain physical, chemical and biological properties of the topsoil covers obtained from the various coal discard sites as well as the reference sites, the relative success or progress of rehabilitation and the possible correlation between the biological indicators of soil quality and the establishment of self sustaining vegetation covers was determined. Results from soil physical and chemical analyses and percentage vegetation cover were correlated with the results obtained for the functional and structural diversity of microbial communities at the various sites. All results were investigated through statistical and multivariate analysis and the most prominent physical and chemical parameters that influence the biological and biochemical properties of the soil and possibly the establishment of self-sustainable vegetation cover on these mine-tailing sites were identified. Results obtained from this study indicated no significant difference (p>0.05) between the various discard sites based on conventional microbiological enumeration techniques. However, significant differences (p<0.05) could be observed between the three reference sites. All enzymatic activities assayed for the rehabilitation sites, with the exception of urease and alkaline phosphatase displayed a strong, positive association with the organic carbon content (%C). Ammonium concentration had a weak association with all the enzymes studied and pH only showed a negative association with acid phosphatase activity. A positive association was observed between the viable microbial biomass, vegetation cover and the organic carbon content, ammonium, nitrate and phosphorus concentrations of the soil. The various rehabilitation and reference sites could be differentiated based on the microbial community structure as determined by phospholipid fatty acid (PLFA) analysis. It is hypothesised that the microbial community structure of the Hendrina site is not sustainable when classified along an r-K gradient and that the high percentage of vegetation cover and high levels of estimated viable microbial biomass are an artificial reflection of the current management practices being employed at this site. Results obtained during this study, suggest that an absence or low percentage of vegetation cover and associated lower organic matter content of the soil have a significant negative impact on soil biochemical properties (enzymatic activity) as well as microbial population size. Furthermore, prevailing environmental physico-chemical and management characteristics significantly influences the vegetation cover and subsequently the microbial community structure. The results indicate that the microbial ecosystems in the coal discard sites could become more stable and ecologically self-regulating, provided effective management to enhance the organic carbon content of the soil. This could enhance nutrient cycling, resulting in changes of soil structure and eventually an improved soil quality which could facilitate the establishment of self sustaining vegetation cover. Results obtained during this study suggest that a polyphasic assessment of physical and chemical properties; microbial activities by enzymatic analysis; the characterisation of microbial community structure by analysis of phospholipid fatty acids; and the multifactorial analysis of the data obtained can be used as complementary assessment criteria for the evaluation of the trend of rehabilitation of mine tailings and discard sites. Strategic management criteria are recommended based on the soil quality environmental sustainability indices to facilitate the establishment of self sustainable vegetation covers. The contribution of this research to soil ecology is significant with regards to the intensive investigation and explanation of characteristics and processes that drive ecological rehabilitation and determine the quality of the soil environment. The multidisciplinary approach that is proposed could, furthermore, assist in the successful rehabilitation and establishment of self-sustaining vegetation covers at industrially disturbed areas, as well as assist in improving degraded soil quality associated with both intensive and informal agriculture. Additionally, this approach could negate the negative social and environmental impacts frequently associated with these activities. / Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2004.

The rehabilitation of degraded soils, such as those associated with post-mining sites, requires knowledge of the soil ecosystem and its physical, chemical, and biological composition in order for rehabilitation efforts to fulfil the long-term goal of reconstructing a stable ecosystem for rehabilitated mine soil. This study addresses the need for appropriate assessment criteria to determine the progress of rehabilitation and subsequently the success of management practices. Significant contributions made by this investigation included the establishment of minimum and maximum values for microbial community measurements from two case studies of rehabilitated coal discard sites. Furthermore, it was shown that there was no relationship between changes in microbial community function and structure and the rehabilitation age of the sites. Following this, the considerable impact of management practices on microbial communities was illustrated. The first part of the study investigated the temporal changes in microbial community function and structure in a chronosequence of rehabilitated coal discard sites aged 1 to 11 years. The most important observation made during the investigation of the microbial communities in the different aged soil covers of the rehabilitated coal discard sites, was that there was no relationship between rehabilitation age and microbial activity or abundance of certain microbial groups. What was responsible for a clear differentiation between sites and a shift in microbial community attributes was the management practices applied. A comparison of two chronosequences of rehabilitated coal discard sites was achieved by an application of the 'space-for-time' hypothesis. Sites of different ages and at separate locations ('space') were identified to obtain a chronosequence of ages ('time'). The two chronosequences included sites aged 1 to 11 years (chronosequence A) and 6 to 17 years (chronosequence B), respectively. Sites in the same chronosequence were managed identically, while there was a distinct difference in management practices applied to each chronosequence. The long-term effect of the different management regimes on the soil microbial community function and structure was investigated. Again, there was no relationship between rehabilitation age and microbial community measurements. Fluctuations of selected microbial properties occurred in both chronosequences and similar temporal trends existed over the rehabilitation periods. However, the less intensively managed chronosequence (8) seemed more stable (less fluctuation occurred) over the rehabilitation period than the more intensively managed chronosequence (A). It was therefore concluded that the microbial communities in the less managed sites maintained their functional and structural integrity within bounds in the absence of management inputs or disturbance. While there was similarity in the trends over time for individual microbial community measurements, the seemingly more stable conditions in chronosequence 6 are important in terms of the goal of rehabilitation. / Thesis (Ph.D. (Environmental Science)--North-West University, Potchefstroom Campus, 2007

Despite emerging water shortages, most water is only used once, and often with low efficiency. However, with appropriate treatment, water can be re–used to reduce the demand on freshwater sources. The Department of Water Affairs, South Africa, promotes industries to reduce discharges into water resources in order to sustain an overall good water quality of all water systems. All of this ultimately leads to industries striving towards zero effluent discharge. Primary Column Bottoms (PCBs) is a wastewater stream derived from the Fischer–Tropsch Gas to Liquid process and consists mainly of organic acids, but no nitrogen or phosphorous, which by implication excludes possible biodegradation. In the operation of cooling towers in industrial processes, cooling water quality has a direct impact on the cooling performance of the system, where nutrient levels may affect fouling, scaling and corrosion observed in the cooling towers. Fouling, scaling and corrosion affect the operating efficiency of cooling water systems and may necessitate the addition of chemical agents to control these phenomena. This has a financial and labour time impact on the operation of these systems. In this study a mini cooling tower test rig was operated with a synthetic PCB effluent as cooling water and various cycles of concentration, pH and linear flow velocities (LFVs). A constant delta temperature of 10 °C was maintained. Cycles of concentration (COC) evaluated included 2, 4 and 6 cycles of concentration and linear flow velocities evaluated was 0.6 m/s, 0.9 m/s and 1.2 m/s. Fouling, scaling and corrosion rates were determined using corrosion coupons and heat exchanger tubes for mild steel and stainless steel. Besides the evaluation of the various operational parameters for fouling, scaling and corrosion, the possibility for chemical oxygen demand (COD) removal by operating the cooling tower as a bioreactor was also evaluated. To this end nutrient correction was applied to the reactor to allow for a CNP ratio of 100:10:1. With regard to fouling, scaling and corrosion, mild steel was more affected by fouling, scaling and corrosion compared to stainless steel where almost no fouling, scaling and corrosion was observed. Overall increased linear flow velocities resulted in higher fouling and scaling rates, whereas lower linear flow velocities resulted in decreased corrosion rates. In terms of cycles of concentration, increased COC resulted in higher fouling, scaling and corrosion rates. Despite the high nutrient removal levels, the accompanying fouling, scaling and corrosion was still below the particular industry’s guidelines. Besides physical–chemical evaluation of the towers under the various operational conditions, culture–dependent and culture–independent methods were also employed. Concerning culture–dependent approaches the study demonstrated that aerobic and anaerobic organisms are present in both the planktonic and sessile phase of the cooling tower reactors. Heterotrophic aerobes were found to be the most abundant under all the operating conditions. Sulphate reducing bacteria were more abundant in the sessile phase of the cooling towers, and the presence of high sulphate levels in the experiments could be indicative of the sulphate reducing bacteria actively participating in the microbial community. Lower than expected corrosion levels, however, suggest that a combination of the organisms in the biofilm rather than sulphate reducing bacteria alone, contributed to the corrosion rates observed. Culture–independent methods, specifically phospholipid fatty acid analysis supported the results from the culture–dependent methods. Furthermore results demonstrated that linear flow velocity had a greater effect on the community structure than cycles of concentration. Finally molecular methods, specifically denaturing gradient gel electrophoresis, found that increasing cycles of concentration resulted in increased microbial community diversity, while increasing linear flow velocity resulted in decreased microbial community diversity. Regarding COD removal, nutrient correction of the synthetic PCB effluent achieved 89.35 % COD removal at 2 COC and 1.2 m/s LFV, while 80.85 % COD removal was achieved at 4 COC at 1.2 m/s LFV. From these results it was recommended that the operation of the cooling tower should be at 4 COC and 1.2 m/s, which despite slightly lower % COD removal, were characterised by fouling, scaling and corrosion rates well within guidelines. / Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2012.

Despite emerging water shortages, most water is only used once, and often with low efficiency. However, with appropriate treatment, water can be re–used to reduce the demand on freshwater sources. The Department of Water Affairs, South Africa, promotes industries to reduce discharges into water resources in order to sustain an overall good water quality of all water systems. All of this ultimately leads to industries striving towards zero effluent discharge. Primary Column Bottoms (PCBs) is a wastewater stream derived from the Fischer–Tropsch Gas to Liquid process and consists mainly of organic acids, but no nitrogen or phosphorous, which by implication excludes possible biodegradation. In the operation of cooling towers in industrial processes, cooling water quality has a direct impact on the cooling performance of the system, where nutrient levels may affect fouling, scaling and corrosion observed in the cooling towers. Fouling, scaling and corrosion affect the operating efficiency of cooling water systems and may necessitate the addition of chemical agents to control these phenomena. This has a financial and labour time impact on the operation of these systems. In this study a mini cooling tower test rig was operated with a synthetic PCB effluent as cooling water and various cycles of concentration, pH and linear flow velocities (LFVs). A constant delta temperature of 10 °C was maintained. Cycles of concentration (COC) evaluated included 2, 4 and 6 cycles of concentration and linear flow velocities evaluated was 0.6 m/s, 0.9 m/s and 1.2 m/s. Fouling, scaling and corrosion rates were determined using corrosion coupons and heat exchanger tubes for mild steel and stainless steel. Besides the evaluation of the various operational parameters for fouling, scaling and corrosion, the possibility for chemical oxygen demand (COD) removal by operating the cooling tower as a bioreactor was also evaluated. To this end nutrient correction was applied to the reactor to allow for a CNP ratio of 100:10:1. With regard to fouling, scaling and corrosion, mild steel was more affected by fouling, scaling and corrosion compared to stainless steel where almost no fouling, scaling and corrosion was observed. Overall increased linear flow velocities resulted in higher fouling and scaling rates, whereas lower linear flow velocities resulted in decreased corrosion rates. In terms of cycles of concentration, increased COC resulted in higher fouling, scaling and corrosion rates. Despite the high nutrient removal levels, the accompanying fouling, scaling and corrosion was still below the particular industry’s guidelines. Besides physical–chemical evaluation of the towers under the various operational conditions, culture–dependent and culture–independent methods were also employed. Concerning culture–dependent approaches the study demonstrated that aerobic and anaerobic organisms are present in both the planktonic and sessile phase of the cooling tower reactors. Heterotrophic aerobes were found to be the most abundant under all the operating conditions. Sulphate reducing bacteria were more abundant in the sessile phase of the cooling towers, and the presence of high sulphate levels in the experiments could be indicative of the sulphate reducing bacteria actively participating in the microbial community. Lower than expected corrosion levels, however, suggest that a combination of the organisms in the biofilm rather than sulphate reducing bacteria alone, contributed to the corrosion rates observed. Culture–independent methods, specifically phospholipid fatty acid analysis supported the results from the culture–dependent methods. Furthermore results demonstrated that linear flow velocity had a greater effect on the community structure than cycles of concentration. Finally molecular methods, specifically denaturing gradient gel electrophoresis, found that increasing cycles of concentration resulted in increased microbial community diversity, while increasing linear flow velocity resulted in decreased microbial community diversity. Regarding COD removal, nutrient correction of the synthetic PCB effluent achieved 89.35 % COD removal at 2 COC and 1.2 m/s LFV, while 80.85 % COD removal was achieved at 4 COC at 1.2 m/s LFV. From these results it was recommended that the operation of the cooling tower should be at 4 COC and 1.2 m/s, which despite slightly lower % COD removal, were characterised by fouling, scaling and corrosion rates well within guidelines. / Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2012.

Platelet-derived microparticles, released as a result of platelet activation, promote coagulation through the surface exposure of phosphatidylserine, acting as the catalytic site for the conversion of prothrombin to thrombin by the activated coagulation factors X and V. Although elevated numbers of circulating platelet-derived microparticles can be detected in a number of clinical disorders, the methods for the detection of these microparticles are far from standardised. In addition, recent reports have also speculated that not all microparticles may expose phosphatidylserine, demonstrating that the binding of Annexin V, a phosphatidylserine-specific binding protein, is not detectable on a population of microparticles. The initial stage of this thesis was to establish a flow cytometric method for the detection and enumeration of microparticles based on their capacity to bind Annexin V and to utilise this assay to investigate a number of the issues that have limited assay standardisation. The assay could be performed on either stimulated or unstimulated plasma or whole blood samples. Interestingly, plasma microparticle counts were significantly higher than whole blood microparticle counts. The effects of centrifugation alone could not be attributed as the sole source of this discrepancy. The antigenic characteristics of platelet-derived microparticles were also investigated, with platelet-derived microparticles demonstrated to express the platelet glycoproteins CD31, CD41a, CD42a and CD61. Platelet-derived microparticles also expressed CD42b, and this expression was significantly decreased when compared to their progenitor platelets. The expression of the platelet activation markers CD62p, CD63, CD40L and PAC-1 was dependent upon the sample milieu, suggesting that the centrifugation conditions required to generate platelet-poor plasma may lead to artefactual increases in the expression of platelet activation markers. An investigation of the role of the GpIIb/IIIa complex on the formation of platelet-derived microparticles was also performed. A monoclonal antibody to the GpIIb/IIIa complex (Abciximab) significantly inhibited in vitro collagen-stimulated platelet-derived microparticle formation. Interestingly, platelets obtained from two subjects with impaired GpIIb/IIIa activation, demonstrated normal microparticle formation following collagen stimulation, suggesting that the presence of GpIIb/IIIa complex, but not its activation, is required for collagen-induced microparticle formation. A novel mechanism for microparticle formation was also investigated, with platelet-derived microparticles demonstrated to form in response to the sclerosing agents sodium-tetradecyl sulphate and polidocanol. Interestingly, the removal of plasma proteins by the washing of platelets left platelets more susceptible to sclerosant-induced microparticle formation, suggesting that plasma proteins may protect platelets from microparticle formation. The procoagulant activity of platelet-derived microparticles was also investigated using a novel coagulation assay (XACT) specific for the procoagulant phospholipid. An evaluation of this assay demonstrated a significant correlation between Annexin V binding microparticle counts and procoagulant activity in both whole blood and plasma samples. There was more procoagulant activity in whole blood samples than in plasma samples, suggesting that the procoagulant phospholipid activity was also associated with erythrocytes or leukocytes. To further investigate this phenomenon, a whole blood flow cytometric assay was developed to assess Annexin V binding to erythrocytes, leukocytes, platelets and microparticles. This assay demonstrated that a large proportion of Annexin V binding (51.0%) was associated with erythrocytes. Interestingly, a proportion of the Annexin V binding erythrocytes (24.5%) and leukocytes (78.8%) were also associated with platelet CD61 antigen, suggesting that they also bound a platelet or platelet-derived microparticle. The effect of sample anticoagulant on microparticle procoagulant activity was investigated. Microparticle counts were most stable in EDTA anticoagulated samples, but were stable in sodium citrate for up to 15 minutes following sample collection. The procoagulant activity of microparticles was significantly inhibited by EDTA in collagen-stimulated platelet-rich plasma samples, when compared to sodium citrate anticoagulated samples. Although the initial method used to investigate microparticles was based upon their ability to bind Annexin V, it was consistently observed that a large proportion of events in the size region of a microparticle were Annexin V negative. An investigation was therefore commenced into the procoagulant activity of microparticles based on their capacity to bind Annexin V. The presence of Annexin V negative microparticles was confirmed by flow cytometry and the proportion of microparticles that bound Annexin V was dependent upon type of agonist used to stimulate microparticle formation. Varying the assay constituents (calcium concentration / Annexin V concentration / buffer type) did not alter the proportion of Annexin V binding microparticles. When compared to Annexin V positive microparticles, Annexin V negative microparticles expressed significantly higher levels of CD42b on their surface, but possessed significantly decreased expressions of CD62p, and CD63. A significant correlation between the percentage of Annexin V binding and XACT procoagulant activity was found (p=0.03). Furthermore, Annexin V binding inhibited greater than 98% of procoagulant phospholipid activity, suggesting that Annexin V binding was a true reflection of procoagulant activity. Microparticles could be sorted using either a flow cytometric or magnetic sorting strategy. By electron microscopy, Annexin V negative events isolated following magnetic sorting were vesicular structures and not small platelets or the remnants of activated platelets. In summary, this thesis has demonstrated the ability of the flow cytometer and XACT assays to detect microparticles and their procoagulant activity. It has also shown that the use of Annexin V to detect microparticles may warrant further investigation.

Neste trabalho foi investigado o efeito da administração crônica de prolina sobre o conteúdo total de gangliosídios, fosfolipídios e de colesterol, assim como, sobre o perfil de gangliosídios no córtex, no hipocampo, no hipotálamo e no cerebelo de ratos. Também, foi avaliado o conteúdo e o perfil de gangliosídios nas frações solúvel e resistente a detergente obtidas de membranas sinápticas de córtex. Ratos Wistar foram divididos em dois grupos: 1) injetados subcutaneamente com solução 0,9% de NaCl (animais controle) e 2) injetados subcutaneamente com solução de prolina, em concentrações adequadas ao peso corporal (animais hiperprolinêmicos). Tanto a solução de prolina quanto a salina foram administradas do 6° ao 28° dia pós-natal. Doze horas após a última administração, os animais foram sacrificados mediante decapitação sem anestesia. As estruturas cerebrais foram dissecadas e em seguida homogeneizadas em clorofórmio:metanol na proporção 1:1 vpara a extração lipídica. As membranas sinápticas foram obtidas através de centrifugação diferencial e as frações solúvel e resistente a detergente foram isoladas através de tratamento das membranas com Triton X-100 a 4°C para investigação de microdomínios de membrana. Após a realização das análises, os resultados mostraram que os animais submetidos ao tratamento crônico com prolina apresentaram um marcado aumento no conteúdo de gangliosídios no córtex cerebral e no hipocampo, enquanto os conteúdos de fosfolipídios e de colesterol aumentaram somente no hipocampo. Além disso, os conteúdos destes compostos não foram alterados no hipotálamo e no cerebelo de animais hiperprolinêmicos. Por outro lado, o conteúdo de gangliosídios diminuiu nas frações solúvel e resistente a detergente obtidas de membranas sinápticas de córtex de animais hiperprolinêmicos. Embora os perfis de gangliosídios não tenham sido aparentemente modificados, as quantidades absolutas das espécies foram alteradas tanto no extrato total, como nos microdomínios de membrana obtidos do córtex. Estes dados revelam que o tratamento crônico com prolina afeta de forma distinta as diferentes regiões cerebrais quanto à composição lipídica das membranas celulares, refletindo-se sobre a distribuição de lipídios nos microdomínios de membrana do córtex. Entre as conseqüências destes fenômenos poderiam ser sugeridas modulações diferentes nas transmissões sinápticas que contribuiriam para o déficit cognitivo e/ou outras disfunções neurológicas presentes em pacientes com hiperprolinemia tipo II. / In the present work we investigated the effects of chronic proline administration on ganglioside, cholesterol and phospholipid total contents, as well as on ganglioside profile in cerebral cortex, hippocampus, hypothalamus and cerebellum of rats. We also evaluated the ganglioside content and profile in detergent- soluble and resistant fractions isolated from synaptic membranes obtained from cerebral cortex. Wistar rats were divided into two groups: 1) saline (control) and 2) proline injected (hyperprolinemic). Proline solution or saline were administered from 6th to 28th postnatal day, according to body weight. Twelve hours after the last injection, the animals were sacrificed by decapitation without anesthesia. Brain structures were homogenized with chlorophorm:methanol 1:1 for lipid extraction. Synaptic membrane was extracted by differential centrifugation and detergent- soluble and resistant fractions were isolated by cold Triton X-100 treatment. Results showed that rats subjected to chronic proline treatment presented a significant increase of ganglioside content on cortex and hippocampus, while phospholipid and cholesterol contents only increased in hippocampus. However, the content of these components were not altered in hypothalamus and cerebellum of hyperprolinemic rats. On the other hand, ganglioside content decreased in detergent- soluble and resistant fractions isolated from synaptic membrane obtained from hyperprolinemic cortex. Although ganglioside profiles were apparently not modified, the individual absolute quantities were altered in cortex total lipid extract and membrane microdomains obtained from cerebral cortex. Our findings suggest that chronic proline treatment affects, in a distinct manner, different cerebral regions concerning the lipid composition of the cell membranes, reflecting on its distribution in the cortex membrane microdomains. Among these phenomena consequences, different modulations in synaptic transmission may be suggested which may contribute to the impairment in cognition and/or other neurological disfunctions found in hyperprolinemia type II patients.

Submitted by Ana Maria Fiscina Sampaio (fiscina@bahia.fiocruz.br) on 2013-10-18T17:05:09Z No. of bitstreams: 1 Marcos Soares Vieira.Atividades das paraoxanase... 2013.pdf: 1230050 bytes, checksum: 912c1ef5707ad9fba3fa861c29a41e7e (MD5) / Made available in DSpace on 2013-10-18T17:05:09Z (GMT). No. of bitstreams: 1 Marcos Soares Vieira.Atividades das paraoxanase... 2013.pdf: 1230050 bytes, checksum: 912c1ef5707ad9fba3fa861c29a41e7e (MD5) Previous issue date: 2013 / Fundação Oswaldo Cruz. Centro de Pesquisas Gonçalo Moniz. Salvador, BA, Brasil / Doenças cardiovasculares (DCV) são as principais causas de morbidade e mortalidade do ocidente, aparecendo como causa mais frequente de óbitos nos países desenvolvidos e em desenvolvimento. Alterações no metabolismo das lipoproteínas estão diretamente relacionadas ao aumento do risco de DCV. Objetivos: Avaliar o remodelamento da partícula HDL determinando a capacidade de incorporação de fosfolipídeos na HDL, a atividade da paraoxonase/aril-esterase (PON), dentre outros marcadores plasmáticos relacionados ao metabolismo da HDL, além da influência da hipertrigliceridemia neste processo. Casuística e Métodos: Estudo de corte transversal, com amostragem por conveniência. Foram avaliados ambulatorialmente 66 indivíduos do sexo masculino, idade entre 32 e 75 anos (média: 51,1), distribuídos em dois grupos, não-hipertrigliceridêmicos (NHipTRI) e hipertrigliceridêmicos (HipTRI), estes últimos estratificados em dois níveis, HipTRI HDL-C≥40 e HipTRI HDL-C<40. Foram realizados testes estatísticos paramétricos e não-paramétricos, utilizando o software GraphPad Prism 5.01 (USA), e as diferenças foram consideradas significantes quando p<0,05 para intervalo de confiança de 95%. Resultados: Não foram observadas diferenças nas prevalências dos fatores de risco para DCV, como sedentarismo, etilismo, hipertensão, diabetes e tabagismo, entre os grupos. A atividade da PON e a incorporação de fosfolipídeos foram similares nos três grupos estudados. O tamanho estimado da partícula HDL foi maior no grupo NHipTRI (0,29±0,05), do que nos grupos hipertrigliceridemicos: HipTRI HDL ≥40 (0,26±0,03), e HipTRI HDL<40 (0,24±0,05). No grupo NHipTRI foi encontrada correlação linear positiva entre a atividade da PON e apoA (r=0,3908, p=0,0484, Pearson). Já no grupo HipTRI HDL≥40 houve correlação positiva entre PON e apoB (r=0,5678, p=0,0342, Pearson). Por outro lado, no grupo HipTRI HDL<40 houve correlação linear negativa entre apoB e incorporação de fosfolipídeos na HDL (r=-0,5144, p=0,0290, Pearson). Conclusão: Desta forma, os resultados sugerem que a hipertrigliceridemia interfere não só no remodelamento da HDL, como também sua capacidade antioxidante. / Cardiovascular diseases (CVD) are the leading causes of morbidity and mortality in the western world and is the major cause of death in developed and developing countries. Lipoprotein metabolism is directly related to the risk of developing CVD. Objectives: this study aimed to evaluate HDL particle remodeling, determining HDL ability to incorporate phospholipids, paraoxonase (PON) activity, among others plasma markers related to HDL metabolism, besides the influence of hypertriglyceridemia in this process. Casuistic and Methods: a cross-sectional study with convenience sampling, were carried out with 66 subjects outpatient males, aged between 32 and 75 years old (mean: 51.1), into nonhypertriglyceridemic (NHipTRI) and hypertriglyceridemic (HipTRI) groups, the HipTRI group were stratified in HipTRI com HDL-C ≥ 40 mg/dL and HipTRI com HDL-C <40 mg/dL. Parametric and non-parametric statistic tests were performed in GraphPad Prism 5.01 (USA), and differences were considered significant when p <0.05 to C.I of 95%. Results: there were no differences in the prevalence of CVD risk factors, such as sedentarism, alcohol drinkers, hypertension, diabetes, and tobacco users in the groups. PON activity and phospholipids incorporation were similar in the three groups. The estimated size of HDL particles was greater in NHipTRI (0.29 ± 0.05) when compared to hypertriglyceridemic groups: HipTRI HDL≥40 mg/dL (0.26 ± 0.03) and HipTRI HDL>40 mg/dL (0.24 ± 0.05). In NHipTRI group positive linear correlation was found between PON activity and apoA (r = 0.3908, p = 0.0484, Pearson). In HipTRI HDL≥40 mg/dL group, positive correlation were found between PON and apoB (r = 0.5678, p = 0.0342, Pearson). On the other hand, HipTRI HDL<40 mg/dL shows a negative linear correlation between apoB and phospholipids incorporation into HDL (r = -0.5144, p = 0.0290, Pearson). Conclusion: the results suggest that hypertriglyceridemia can affect both remodeling of particles HDL, as their antioxidant capacity.

Doctor of Philosophy / Department of Agronomy / Charles W. Rice / Gretchen F. Sassenrath / Soil microorganisms are a critical component of ecosystem services provided by soil. Soil management drives soil physical, chemical, and biological properties. Pedogenesis and management interact to change microbial structure and function in the soil profile. Soil microbial properties may vary temporally with crop development and crop species. The objective of this study was to explore the pedogenetic and anthropogenic controls on key soil microbial properties by (i) assessing the profile of a claypan soil under conventional tillage (CT), no-till (NT), and hay meadow (HM); (ii) assessing seasonal changes of soil microbial properties in a corn/winter wheat/soybean rotation under CT and NT; and (iii) assessing vertical changes of soil microbial properties in response to long-term (28 yrs) tillage and mineral and organic fertilization. Selected microbial properties included extracellular enzyme activity, microbial structure as measured by phospholipid fatty acid (PLFA), as well as soil chemical properties. Soil C, enzyme activities, and microbial biomass were greatest in HM soils, followed by NT and then CT in the claypan soil. Wheat in the rotation increased hydrolase activity and bacterial biomass more than corn, while microbial activities were stable during soybean growth. Increased enzyme activities in the claypan layer resulted from the combination of clay-enzyme interaction and impacts from management practices. In a Mollisol soil, an increase in C-acquiring enzyme activity and microbial PLFAs in a buried A horizon was a result of root growth under no-till practice and mineral fertilization. Surprisingly, long-term mineral fertilizer applications had little effect on enzyme activities and microbial biomass. Long-term organic fertilization increased soil C, enzyme activities, and PLFAs but decreased arbuscular mycorrhizal fungi (AMF) throughout the soil profile to a depth of 90 cm. Microbial properties are controlled by crop and soil management at the soil surface and by the interaction of management and pedogenetic properties deeper in the soil profile. Incorporating grasses in the crop rotation may allow nutrients to be extracted from deeper within the soil profile, enhancing the utilization of the entire soil profile and providing additional nutrient resources to cash crops. Incorporating wheat in the crop rotation supports greater microbial activity and biomass after corn harvest, especially in no-till management. Additional research is required to delineate further causative factors impacting enzyme activity in the claypan layer, a finer resolution in soil microbial community at the species level to explore the linkage between ecological function and microbiome structure, and a network analysis for the soil-plant-microbe interactions.

Neste trabalho foi investigado o efeito da administração crônica de prolina sobre o conteúdo total de gangliosídios, fosfolipídios e de colesterol, assim como, sobre o perfil de gangliosídios no córtex, no hipocampo, no hipotálamo e no cerebelo de ratos. Também, foi avaliado o conteúdo e o perfil de gangliosídios nas frações solúvel e resistente a detergente obtidas de membranas sinápticas de córtex. Ratos Wistar foram divididos em dois grupos: 1) injetados subcutaneamente com solução 0,9% de NaCl (animais controle) e 2) injetados subcutaneamente com solução de prolina, em concentrações adequadas ao peso corporal (animais hiperprolinêmicos). Tanto a solução de prolina quanto a salina foram administradas do 6° ao 28° dia pós-natal. Doze horas após a última administração, os animais foram sacrificados mediante decapitação sem anestesia. As estruturas cerebrais foram dissecadas e em seguida homogeneizadas em clorofórmio:metanol na proporção 1:1 vpara a extração lipídica. As membranas sinápticas foram obtidas através de centrifugação diferencial e as frações solúvel e resistente a detergente foram isoladas através de tratamento das membranas com Triton X-100 a 4°C para investigação de microdomínios de membrana. Após a realização das análises, os resultados mostraram que os animais submetidos ao tratamento crônico com prolina apresentaram um marcado aumento no conteúdo de gangliosídios no córtex cerebral e no hipocampo, enquanto os conteúdos de fosfolipídios e de colesterol aumentaram somente no hipocampo. Além disso, os conteúdos destes compostos não foram alterados no hipotálamo e no cerebelo de animais hiperprolinêmicos. Por outro lado, o conteúdo de gangliosídios diminuiu nas frações solúvel e resistente a detergente obtidas de membranas sinápticas de córtex de animais hiperprolinêmicos. Embora os perfis de gangliosídios não tenham sido aparentemente modificados, as quantidades absolutas das espécies foram alteradas tanto no extrato total, como nos microdomínios de membrana obtidos do córtex. Estes dados revelam que o tratamento crônico com prolina afeta de forma distinta as diferentes regiões cerebrais quanto à composição lipídica das membranas celulares, refletindo-se sobre a distribuição de lipídios nos microdomínios de membrana do córtex. Entre as conseqüências destes fenômenos poderiam ser sugeridas modulações diferentes nas transmissões sinápticas que contribuiriam para o déficit cognitivo e/ou outras disfunções neurológicas presentes em pacientes com hiperprolinemia tipo II. / In the present work we investigated the effects of chronic proline administration on ganglioside, cholesterol and phospholipid total contents, as well as on ganglioside profile in cerebral cortex, hippocampus, hypothalamus and cerebellum of rats. We also evaluated the ganglioside content and profile in detergent- soluble and resistant fractions isolated from synaptic membranes obtained from cerebral cortex. Wistar rats were divided into two groups: 1) saline (control) and 2) proline injected (hyperprolinemic). Proline solution or saline were administered from 6th to 28th postnatal day, according to body weight. Twelve hours after the last injection, the animals were sacrificed by decapitation without anesthesia. Brain structures were homogenized with chlorophorm:methanol 1:1 for lipid extraction. Synaptic membrane was extracted by differential centrifugation and detergent- soluble and resistant fractions were isolated by cold Triton X-100 treatment. Results showed that rats subjected to chronic proline treatment presented a significant increase of ganglioside content on cortex and hippocampus, while phospholipid and cholesterol contents only increased in hippocampus. However, the content of these components were not altered in hypothalamus and cerebellum of hyperprolinemic rats. On the other hand, ganglioside content decreased in detergent- soluble and resistant fractions isolated from synaptic membrane obtained from hyperprolinemic cortex. Although ganglioside profiles were apparently not modified, the individual absolute quantities were altered in cortex total lipid extract and membrane microdomains obtained from cerebral cortex. Our findings suggest that chronic proline treatment affects, in a distinct manner, different cerebral regions concerning the lipid composition of the cell membranes, reflecting on its distribution in the cortex membrane microdomains. Among these phenomena consequences, different modulations in synaptic transmission may be suggested which may contribute to the impairment in cognition and/or other neurological disfunctions found in hyperprolinemia type II patients.

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES / In this work we present a computational study of the electroporation process of lipid membranes in the presence of water. First, we developed an investigation of the formation of pores through simulations based on classical molecular dynamics using NAMD code. Subsequently we developed ab initio study using density functional theory, as implemented in the SIESTA code. This analysis showed the formation of pores within the lipid bilayer 1ns after the application of external electric field, 300 K. We found that set temperatures above 300 K may reduce the simulation time. We also observed a rearrangement of water molecules of a Okuno Tanioka cone due to the action of the electric field. Interestingly, this induced an increase of the number of hydrogen bonds, which was not observed using apolar molecules such as chloroform. After, we performed the analysis of structural and electronic properties of the structures of phospholipids,which were extracted from the molecular dynamics calculations. It is noteworthy that the action of the electric field changed the energy gap of both the structures of isolated phospholipid as for the lipid bilayer configuration. Through maps of electrostatic potential, we showed that the electric field leads to a polarization of phospholipid, which induced a torque in the electric dipole moments of the water molecule. The rotation of the electric dipole moments gave rise to stress in the lipid bilayer, which by itself was not enough to break it. In summary, the presence of water was critical since under the action of an electric field the molecules rearranged to form a cone. This fact, associated with the weakening of the lipid membrane due the stress from the realignment electric dipole, was the responsible for the poration process. / Neste trabalho, apresentamos um estudo computacional do processo de eletroporação de membranas lipídicas na presença de água. Na primeira etapa, realizamos a dinâmica da formação de poros através de simulações baseadas na dinâmica molecular clássica, utilizando o código NAMD. Posteriormente, desenvolvemos um estudo ab initio, empregando a teoria do funcional da densidade, conforme implementada no programa SIESTA. Os resultados da primeira análise mostraram a formação de poros no interior da bicamada após 1ns de aplicação de um campo elétrico externo, a uma temperatura de 300 K. Também verificamos que, para temperaturas acima de 300 K, esse tempo se reduz. Observamos um rearranjo das moléculas de água na forma de um cone de Okuno Tanioka devido à ação do campo elétrico. Isso ocasiona um aumento no número de ligações de hidrogênio das mesmas, o que não foi observado com o uso de moléculas apolares como o clorofórmio. Na segunda etapa, realizamos a análise das propriedades eletrônicas e estruturais, utilizando as estruturas dos fosfolipídios provindas dos cálculos de dinâmica molecular. Mostramos que a ação do campo elétrico modifica o gap de energia tanto da estrutura do fosfolipídio isolado quanto para a configuração de bicamada lipídica. Através dos mapas do potencial eletrostático, mostramos que a ação do campo elétrico leva a uma polarização do fosfolipídio ocasionando um torque no momentos de dipolo elétrico da molécula. A rotação dos momentos de dipolo elétrico causa um estresse na bicamada, que por si só não é capaz de rompe-la. Dessa forma, a presença da água é fundamental, pois diante a ação do campo elétrico as moléculas se reordenam arranjando-se de maneira a formar um cone. Este fato, associado ao enfraquecimento da membrana lipídica, devido ao estresse causado pelo realinhamento nos momentos de dipolo elétrico, são a origem do processo de poração.