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As espécies de moscas-das-frutas da família Tephritidae são consideradas importantes pragas da fruticultura mundial por utilizarem vários frutos de valor comercial como substrato para desenvolvimento do seu estágio de larva. O gênero Anastrepha é endêmico do Continente Americano e compreende cerca de 200 espécies descritas, das quais 99 ocorrem no Brasil. Dentre essas espécies, destaca-se a espécie nominal Anastrepha fraterculus (sensu lato), que compreende um complexo de espécies crípticas, quatro das quais foram reconhecidas, até o momento, A. sp.1, A. sp.2 e A. sp.3 (Brasil) e A. sp.4 encontrada no Equador. O presente trabalho buscou a caracterização da variabilidade do espaçador ITS1 do DNA ribossômico de A. sp.1, A. sp.2 e A. sp.3 em amostras populacionais de diversas localidades do Brasil e a análise desse espaçador em amostras de outras regiões das Américas do Sul, Central e México. O ITS1 mostrou ser um marcador bastante útil para análises filogenéticas entre espécies próximas. Os fragmentos amplificados com os iniciadores 18SF e 5.8SR, construídos neste trabalho, continham cerca de 900 pb, não havendo diferenças significativas entre as amostras. Os fragmentos continham uma seqüência parcial do gene 18S, o ITS1 completo e o início do gene 5.8S. O ITS1 variou de 539 a 584 bases. Todos os exemplares apresentaram uma quantidade muito maior de base AT (entre 77,6 a 88,6%). O índice de similaridade entre as amostras variou de 88% a 99,8%. Não foram observadas diferenças significativas intraespecíficas entre as seqüências de amostras populacionais das entidades brasileiras do complexo. A análise filogenética feita pelo programa POY gerou muitas árvores igualmente parcimoniosas. A árvore de consenso estrito agrupou as amostras em clados distintos. O clado (grupo externo) formado por C. capitata e C. rosa foi colocado em um ramo distinto e no outro clado, todas as amostras de Anastrepha. O clado de A. fraterculus, separou as amostras do México e Guatemala das demais, que formaram outro clado. Dentro deste clado, foram formados dois subgrupos, um com as amostras do Peru e Equador e um com as amostras do Brasil e Argentina. Dentro desses clados houve separação em sub-grupos de amostras de cada região geográfica, sendo observada, com algumas exceções uma relação desses grupos com as divisões biogeográficas da entomofauna da América Latina. Desta forma, a análise do ITS1 corrobora resultados anteriores indicando que há claramente três entidades do complexo fraterculus no Brasil (A. sp.1, A. sp.2 e A. sp.3) e que diferentes morfotipos devem existir nas diferentes regiões da América Latina. / Fruit flies of Tephritidae family are important pest for the worldwide fruitculture because many species use commercial variety of fruits as host for the development of thier larval stage. Anastrepha is endemic of the American Continent and comprises about 200 described species, 90 of which occurs in Brazil. Among these species the most important is the nominal A. fraterculus, that, actually, comprises a complex of cryptic species, the so-called \"fraterculus complex\". Four species of the complex has been characterized, three of which occurs in Brazil (A.sp.1, A.sp.2, A. sp.3) and one in Ecuador (A. sp.4). In the present analyses the ITS1 spacer of the ribosomal genes was characterized by PCR and sequencing, in samples of A. fraterculus s.l. from several populations in Brazil and from different regions of South, Central America and Mexico. Amplyfication was carried out with primers designed in the present analyses, 18SF and 5.8SR, that generate fragments of 900 bp containing a partial sequence of the 18S gene, the complete ITS1 and the initial portion of the 5.8S gene. The length of the fragment did not varied significantly among the samples. The ITS1 size varied from 539 to 584 bp, and contained a very high content of AT, from 77.6 to 88.6 %, among samples. Similarity of the ITS1 sequences was high (from 88% to 99.8%) among the samples, and no signficant intraspecific differences were found in the sequences of samples from different brazilian populations. The POY software produced many parcimonious phylogenetic trees, and the strict consensus tree grouped the samples in distinct clades. First, there was a separation of the clade of Ceratitis species (outgroups) from the clade of Anastrepha. Within this clade A. obliqua was isolated from a large clade containg all the samples of A. fraterculus s.l.. Within A. fraterculus, one clade grouped the samples from Mexico and Guatemala, another clade the samples from Ecuador and Peru and a clade with the samples from Brazil and Argentina. The sample of Colombia was found as independent branch of the tree. In each of these clades there were subgroups of the different samples, and it was observed a relationship of these clades and subgroups to the biogeographic divisions of the entomofauna of Latin America with a few exceptions. The analysis of ITS1 clearly corroborate previous data indicating that there are three biological entities of the fraterculus complex in Brazil. It also indicates that different entities must exist in other regions of Latin America.

As espécies de moscas-das-frutas da família Tephritidae são consideradas importantes pragas da fruticultura mundial por utilizarem vários frutos de valor comercial como substrato para desenvolvimento do seu estágio de larva. O gênero Anastrepha é endêmico do Continente Americano e compreende cerca de 200 espécies descritas, das quais 99 ocorrem no Brasil. Dentre essas espécies, destaca-se a espécie nominal Anastrepha fraterculus (sensu lato), que compreende um complexo de espécies crípticas, quatro das quais foram reconhecidas, até o momento, A. sp.1, A. sp.2 e A. sp.3 (Brasil) e A. sp.4 encontrada no Equador. O presente trabalho buscou a caracterização da variabilidade do espaçador ITS1 do DNA ribossômico de A. sp.1, A. sp.2 e A. sp.3 em amostras populacionais de diversas localidades do Brasil e a análise desse espaçador em amostras de outras regiões das Américas do Sul, Central e México. O ITS1 mostrou ser um marcador bastante útil para análises filogenéticas entre espécies próximas. Os fragmentos amplificados com os iniciadores 18SF e 5.8SR, construídos neste trabalho, continham cerca de 900 pb, não havendo diferenças significativas entre as amostras. Os fragmentos continham uma seqüência parcial do gene 18S, o ITS1 completo e o início do gene 5.8S. O ITS1 variou de 539 a 584 bases. Todos os exemplares apresentaram uma quantidade muito maior de base AT (entre 77,6 a 88,6%). O índice de similaridade entre as amostras variou de 88% a 99,8%. Não foram observadas diferenças significativas intraespecíficas entre as seqüências de amostras populacionais das entidades brasileiras do complexo. A análise filogenética feita pelo programa POY gerou muitas árvores igualmente parcimoniosas. A árvore de consenso estrito agrupou as amostras em clados distintos. O clado (grupo externo) formado por C. capitata e C. rosa foi colocado em um ramo distinto e no outro clado, todas as amostras de Anastrepha. O clado de A. fraterculus, separou as amostras do México e Guatemala das demais, que formaram outro clado. Dentro deste clado, foram formados dois subgrupos, um com as amostras do Peru e Equador e um com as amostras do Brasil e Argentina. Dentro desses clados houve separação em sub-grupos de amostras de cada região geográfica, sendo observada, com algumas exceções uma relação desses grupos com as divisões biogeográficas da entomofauna da América Latina. Desta forma, a análise do ITS1 corrobora resultados anteriores indicando que há claramente três entidades do complexo fraterculus no Brasil (A. sp.1, A. sp.2 e A. sp.3) e que diferentes morfotipos devem existir nas diferentes regiões da América Latina. / Fruit flies of Tephritidae family are important pest for the worldwide fruitculture because many species use commercial variety of fruits as host for the development of thier larval stage. Anastrepha is endemic of the American Continent and comprises about 200 described species, 90 of which occurs in Brazil. Among these species the most important is the nominal A. fraterculus, that, actually, comprises a complex of cryptic species, the so-called \"fraterculus complex\". Four species of the complex has been characterized, three of which occurs in Brazil (A.sp.1, A.sp.2, A. sp.3) and one in Ecuador (A. sp.4). In the present analyses the ITS1 spacer of the ribosomal genes was characterized by PCR and sequencing, in samples of A. fraterculus s.l. from several populations in Brazil and from different regions of South, Central America and Mexico. Amplyfication was carried out with primers designed in the present analyses, 18SF and 5.8SR, that generate fragments of 900 bp containing a partial sequence of the 18S gene, the complete ITS1 and the initial portion of the 5.8S gene. The length of the fragment did not varied significantly among the samples. The ITS1 size varied from 539 to 584 bp, and contained a very high content of AT, from 77.6 to 88.6 %, among samples. Similarity of the ITS1 sequences was high (from 88% to 99.8%) among the samples, and no signficant intraspecific differences were found in the sequences of samples from different brazilian populations. The POY software produced many parcimonious phylogenetic trees, and the strict consensus tree grouped the samples in distinct clades. First, there was a separation of the clade of Ceratitis species (outgroups) from the clade of Anastrepha. Within this clade A. obliqua was isolated from a large clade containg all the samples of A. fraterculus s.l.. Within A. fraterculus, one clade grouped the samples from Mexico and Guatemala, another clade the samples from Ecuador and Peru and a clade with the samples from Brazil and Argentina. The sample of Colombia was found as independent branch of the tree. In each of these clades there were subgroups of the different samples, and it was observed a relationship of these clades and subgroups to the biogeographic divisions of the entomofauna of Latin America with a few exceptions. The analysis of ITS1 clearly corroborate previous data indicating that there are three biological entities of the fraterculus complex in Brazil. It also indicates that different entities must exist in other regions of Latin America.

Chez les insectes phytophages, l'adaptation à la plante hôte peut correspondre à l'une des premières étapes de la spéciation. Dans ce contexte, ce manuscrit s'intéresse à Spodoptera frugiperda (Lepidoptera : Noctuidae), un ravageur responsable de dommages importants sur de nombreuses cultures en Amérique et dans les Caraïbes. Spodoptera frugiperda présente deux variants, l'un adapté au riz et l'autre au maïs, et constitue un modèle biologique pertinent pour étudier ce mécanisme. En effet, les deux variants sont morphologiquement identiques, mais ils sont génétiquement différenciés et présentent des différences écologiques et comportementales. L'ensemble de ces caractéristiques suggèrent la présence d'un isolement reproducteur entre les deux variants, qui pourraient alors correspondre à deux espèces différentes. Cependant la présence d'hybrides dans la nature ainsi que des résultats controversés sur le succès d'accouplement entre les deux variants, rendent ambiguë le statut d'espèce de S. frugiperda. L'objectif de ce travail est donc de mieux estimer, à travers une étude intégrative, le niveau de différenciation génétique présent entre les deux variants de S. frugiperda. Grâce à un premier niveau d'analyse, menées à partir de population naturelles, il a été possible de mettre en évidence un niveau de différenciation génétique élevé entre les deux variants, qui est compatible à celui attendu entre deux espèces. Le deuxième niveau d'étude réalisé à partir de population de laboratoire nous a permis de mettre en évidence la présence d'un isolement reproducteur entre les deux variants, se traduisant notamment par une distorsion de ségrégation méiotique des marqueurs moléculaires chez les hybrides. L'ensemble de ces résultats supportent l'hypothèse selon laquelle le variant riz et maïs de Spodoptera frugiperda seraient des entités situées à une étape avancée dans le continuum de la spéciation. / In phytophagous insects, adaptation to host plant could be the first step leading to speciation. In this context, this document focus on moth Spodoptera frugiperda (Lepidoptera: Noctuidae), a pest responsible for serious damages in several crops in the Western hemisphere. Spodoptera frugiperda consists of two host-plant strains, one adapted to rice and the other adapted to maize, which made it a relevant model to study this mechanism. Though the two variants are morphologically identical, they are nonetheless genetically distinguishable and present some ecological and behavioral differences. The species status of S. frugiperda is also highly controversial because hybrids naturally occur in the wild, not to mention the fact of the discrepancies among published results concerning mating success between the two strains. The aim of this thesis is thus to better estimate, through an integrative approach, the level of genetic differentiation between the two variants of S. frugiperda. Starting with natural populations, various phylogenetic methods allowed us to highlight a high level of genetic differentiation between the two variants, compatible with what is expected between distinct species. Furthermore, studies on laboratory populations, including crossing experiments, showed a significant unidirectional bias in inter-strain mating success and the presence of meiotic segregation distortion of molecular markers in hybrid progenies. These results as a whole support the assumption that the two strains of S. frugiperda are well-advanced in the continuum of speciation.

The coexistence of humans and rodents lasts from the beginnings of the history of agriculture. Many rodent populations accepted to synanthropic way of life and as commensals accompany human societies until today. In the first study we wanted to find out, how the evolution of non-commensal rodent species, a Cypriot mouse (Mus cypriacus), was influenced by people. This endemic island species evolved on the Cyprus Island without presence of any mammalian competitors or predators. In last 10.000 years humans arrived on the island, bringing several mammalian species, which affected the environment markedly. A black rat (Rattus rattus) is now dominant species there and presumably it is an important competitor for the Cypriot mouse. We supposed that the mice should avoid its odour. Nevertheless the rats odour was preferred by the mouse, probably as an odour of phylogenetically related species. On the contraty, the odour of domestic cat (species, which is also widespread on the island), was avoided. In conclusion, the long-term isolation from mammalian predators did not affect the antipredatory reactions of the Cypriot mouse. Our next study was focuse on changes in behavioural strategies of different populations of mice: the main question was how the commensal way of life affects their exploratory...

The coexistence of humans and rodents lasts from the beginnings of the history of agriculture. Many rodent populations accepted to synanthropic way of life and as commensals accompany human societies until today. In the first study we wanted to find out, how the evolution of non-commensal rodent species, a Cypriot mouse (Mus cypriacus), was influenced by people. This endemic island species evolved on the Cyprus Island without presence of any mammalian competitors or predators. In last 10.000 years humans arrived on the island, bringing several mammalian species, which affected the environment markedly. A black rat (Rattus rattus) is now dominant species there and presumably it is an important competitor for the Cypriot mouse. We supposed that the mice should avoid its odour. Nevertheless the rats odour was preferred by the mouse, probably as an odour of phylogenetically related species. On the contraty, the odour of domestic cat (species, which is also widespread on the island), was avoided. In conclusion, the long-term isolation from mammalian predators did not affect the antipredatory reactions of the Cypriot mouse. Our next study was focuse on changes in behavioural strategies of different populations of mice: the main question was how the commensal way of life affects their exploratory...

The Spanish slug (Arion vulgaris) is one of the most problematic invasive species in Europe and a serious pest species in agriculture and gardens, and it can have negative effects on native slug species. In this study, we used passively intergraded transponder (PIT) telemetry to determine the movement behavior of 57 Spanish slugs during autumn in two different habitats: a private garden and a deciduous forest, located in Karlstad municipality, Sweden. The slugs generally moved within relatively small areas. There was a difference between the movements between the two habitats, with slugs moving longer distances per day (2.0 m day‑1) and over larger areas in the forest than in the garden (1.1 m day-1). Local control measures are therefore potentially effective in gardens and in agricultural landscapes, since the Spanish slug there concentrate within patches of habitat. To develop control methods to mitigate the impact of this problematic slug, we need more basic ecological knowledge, and this study provides such knowledge. / Den spanska skogssnigeln (Arion vulgaris) är en av Europas mest problematiska invasiva arter och ett allvarligt skadedjur för jordbruk och trädgårdar. Den kan också ha negativa effekter på inhemska snigelarter. I den här studien använde vi telemetri baserat på passivt integrerade transpondrar (PIT) för att bestämma rörelsemönstret hos 57 spanska skogssniglar under hösten i två olika habitat: en villaträdgård och en lövskog, i Karlstads kommun, Sverige. Sniglarna rörde sig inom små områden. Det var en skillnad mellan rörelserna i de två habitaten, sniglarna förflyttade sig längre distanser per dag (2,0 m dag-1) och över större områden i skogen än i trädgården (1,1 m day-1). Lokala kontrollåtgärder är därför potentiellt effektiva i trädgårdar och jordbrukslandskap, då den spanska skogssnigeln där koncentrerar sig inom fläckar av habitat. För att utveckla kontrollmetoder för att minska påverkan av den här problematiska snigeln, så behöver vi mer grundläggande ekologisk kunskap, och den här studien förser oss med sådan kunskap.

To refine our knowledge and to adequately test hypotheses concerning theoretical and applied aspects of invasion biology, successful and unsuccessful invaders should be compared. This study investigated insect establishment patterns by comparing the climatic preferences and biological attributes of two groups of polyphagous insect species that are constantly intercepted at New Zealand's border. One group of species is established in New Zealand (n = 15), the other group comprised species that are not established (n = 21). In the present study the two groups were considered to represent successful and unsuccessful invaders. To provide background for interpretation of results of the comparative analysis, global areas that are climatically analogous to sites in New Zealand were identified by an eco-climatic assessment model, CLIMEX, to determine possible sources of insect pest invasion. It was found that south east Australia is one of the regions that are climatically very similar to New Zealand. Furthermore, New Zealand shares 90% of its insect pest species with that region. South east Australia has close trade and tourism links with New Zealand and because of its proximity a new incursion in that analogous climate should alert biosecurity authorities in New Zealand. Other regions in western Europe and the east coast of the United States are also climatically similar and share a high proportion of pest species with New Zealand. Principal component analysis was used to investigate patterns in insect global distributions of the two groups of species in relation to climate. Climate variables were reduced to temperature and moisture based principal components defining four climate regions, that were identified in the present study as, warm/dry, warm/wet, cool/dry and cool/moist. Most of the insect species established in New Zealand had a wide distribution in all four climate regions defined by the principal components and their global distributions overlapped into the cool/moist, temperate climate where all the New Zealand sites belong. The insect species that have not established in New Zealand had narrow distributions within the warm/wet, tropical climates. Discriminant analysis was then used to identify which climate variables best discriminate between species presence/absence at a site in relation to climate. The discriminant analysis classified the presence and absence of most insect species significantly better than chance. Late spring and early summer temperatures correctly classified a high proportion of sites where many insect species were present. Soil moisture and winter rainfall were less effective discriminating the presence of the insect species studied here. Biological attributes were compared between the two groups of species. It was found that the species established in New Zealand had a significantly wider host plant range than species that have not established. The lower developmental threshold temperature was on average, 4°C lower for established species compared with non-established species. These data suggest that species that establish well in New Zealand have a wide host range and can tolerate lower temperatures compared with those that have not established. No firm conclusions could be drawn about the importance of propagule pressure, body size, fecundity or phylogeny for successful establishment because data availability constrained sample sizes and the data were highly variable. The predictive capacity of a new tool that has potential for eco-climatic assessment, the artificial neural network (ANN), was compared with other well used models. Using climate variables as predictors, artificial neural network predictions were compared with binary logistic regression and CLIMEX. Using bootstrapping, artificial neural networks predicted insect presence and absence significantly better than the binary logistic regression model. When model prediction success was assessed by the kappa statistic there were also significant differences in prediction performance between the two groups of study insects. For established species, the models were able to provide predictions that were in moderate agreement with the observed data. For non-established species, model predictions were on average only slightly better than chance. The predictions of CLIMEX and artificial neural networks when given novel data, were difficult to compare because both models have different theoretical bases and different climate databases. However, it is clear that both models have potential to give insights into invasive species distributions. Finally the results of the studies in this thesis were drawn together to provide a framework for a prototype pest risk assessment decision support system. Future research is needed to refine the analyses and models that are the components of this system.

Το βακτήριο Wolbachia είναι ένα ενδοκυττάριο και μητρικά κληρονομούμενο συμβιωτικό βακτήριο. Ανήκει στην ομοταξία των Alphaproteobacteria και την τάξη των Rickettsiales. Αποτελεί ίσως τον πιο διαδεδομένο ενδοκυττάριο συμβιωτικό οργανισμό στον πλανήτη, καθώς έχει εντοπιστεί μέχρι στιγμής σε πληθώρα αρθροπόδων και νηματωδών της φιλαρίασης. Πρόσφατες μελέτες εκτιμούν ότι πάνω από το 40% των ειδών αρθροπόδων είναι μολυσμένα με το βακτήριο Wolbachia. Το συμβιωτικό αυτό βακτήριο επηρεάζει τις βιολογικές λειτουργίες και ιδιότητες των ξενιστών του και είναι υπεύθυνο για μια σειρά αναπαραγωγικών ανωμαλιών, όπως η κυτταροπλασματική ασυμβατότητα, η παρθενογένεση, η θανάτωση των αρσενικών εμβρύων και η θηλυκοποίηση. Τα μοναδικά αυτά βιολογικά χαρακτηριστικά του βακτηρίου Wolbachia προσελκύουν όλο και περισσότερο το ενδιαφέρον διαφόρων ερευνητών τόσο για το ρόλο του βακτηρίου σε εξελικτικές διαδικασίες (κυρίως ειδογένεση) όσο και για τη χρησιμοποίησή του σε περιβαλλοντικά φιλικές εφαρμογές καταπολέμησης οργανισμών που είναι επιβλαβείς στους τομείς του γεωργικού και δασικού περιβάλλοντος, και της υγείας. Τα είδη του γένους Glossina (Diptera: Glossinidae), γνωστά και ως μύγες τσε-τσε, αποτελούν ξενιστές του βακτηρίου Wolbachia. Η μύγα τσε-τσε είναι ο σημαντικότερος φορέας των παθογόνων τρυπανοσωμάτων στην τροπική Αφρική, τα οποία προκαλούν την ασθένεια του ύπνου (sleeping sickness) στον άνθρωπο και την αντίστοιχη τρυπανοσωμίαση, γνωστή ως nagana, στα ζώα. Η χρησιμοποίηση του βακτηρίου Wolbachia σε μεθόδους βιολογικής καταπολέμησης της μύγας τσε-τσε προαπαιτεί την πλήρη γνώση της γενετικής του ταυτότητας και των αλληλεπιδράσεων του με το ξενιστή. Προς την κατεύθυνση αυτή, και στα πλαίσια της παρούσας διατριβής, πραγματοποιήθηκε η ανίχνευση του συμβιωτικού βακτηρίου Wolbachia σε περισσότερα από 5300 άτομα από φυσικούς και εργαστηριακούς πληθυσμούς 11 διαφορετικών ειδών μύγας τσε-τσε από 13 Αφρικανικές χώρες. Τα αποτελέσματα έδειξαν τεράστια απόκλιση της παρουσίας του βακτηρίου τόσο μεταξύ ειδών όσο και μεταξύ πληθυσμών του ίδιου είδους. Επίσης, πραγματοποιήθηκε ο γενετικός χαρακτηρισμός των στελεχών Wolbachia από συνολικά 29 αντιπροσωπευτικά δείγματα διαφόρων πληθυσμών και ειδών μύγας τσε-τσε, ενώ σε αρκετά από αυτά παρατηρήθηκαν πολλαπλά στελέχη του βακτηρίου. Διαπιστώθηκε εντυπωσιακή γενετική ποικιλότητα στελεχών Wolbachia που απαντούν στα διάφορα είδη μύγας τσε-τσε καθώς και ασυμφωνία μεταξύ των φυλογενειών των στελεχών Wolbachia και των μυγών τσε-τσε ξενιστών της, γεγονός που σημαίνει οριζόντια μετακίνηση του συμβιωτικού βακτηρίου κατά την εξέλιξη. Επιπρόσθετα, εντοπίστηκαν για πρώτη φορά εκτεταμένα γεγονότα οριζόντιας μεταφοράς βακτηριακών γονιδίων στο γονιδίωμα τριών ειδών μύγας τσε-τσε: στο Glossina morsitans morsitans, Glossina pallidipes και Glossina austeni. Από εξελικτικής σκοπιάς, κρίσιμα ερωτήματα προκύπτουν από τα παραπάνω ευρήματα, και πιο συγκεκριμένα σχετικά με: την προέλευση-μηχανισμό αυτών των γεγονότων οριζόντιας μεταφοράς, τον χρονικό προσδιορισμό τους, τον πιθανό ρόλο τους σε διαδικασίες ειδογένεσης και την επιλεκτική εμφάνισή τους σε ορισμένα μόνο είδη Glossina π.χ. στo υποείδos Glossina morsitans centralis που είναι πολύ συγγενικό του Glossina morsitans morsitans δεν παρατηρήθηκε το φαινόμενο. Εξίσου σημαντική και επιβεβλημένη κρίνεται η διεξοδική διερεύνηση του ενδεχομένου τα βακτηριακά γονίδια που ενσωματώθηκαν στο ευκαρυωτικό γονιδίωμα της μύγας τσε-τσε να ευθύνονται για την έκφραση νέων λειτουργιών-ιδιοτήτων (ή να μεταβάλλουν τις ήδη υπάρχουσες), ιδίως μάλιστα εάν αυτές συνδέονται με την αποδοτικότητα μετάδοσης της νόσου της τρυπανοσωμίασης μέσω του φορέα της, δηλαδή της μύγας τσε-τσε. Τέλος, διαπιστώθηκε πιθανή αρνητική συσχέτιση της παρουσίας του βακτηρίου Wolbachia με τον παθογόνο ιό Salivary Gland hypertrophy Virus (SGHV), γεγονός που συζητείται στα πλαίσια βιολογικών εφαρμογών καταπολέμησης του εντόμου-φορέα και της τρυπανοσωμίασης. Παράλληλα, μεγάλο ενδιαφέρον παρουσιάζει η προοπτική χρησιμοποίησης του βακτηρίου Wolbachia για τη βιολογική καταπολέμηση εντόμων αγροτικής ή /και περιβαλλοντικής σημασίας, όπως είναι οι αφίδες και η καρπόκαψα καστανιάς. Το γεγονός αυτό προϋποθέτει την ανίχνευση και τη γενετική ταυτοποίηση του βακτηρίου σε φυσικούς πληθυσμούς εντόμων. Στα πλαίσια της παρούσας διατριβής πραγματοποιήθηκε ανίχνευση και χαρακτηρισμός του βακτηρίου Wolbachia σε 78 συνολικά άτομα από 22 είδη αφίδων, από 26 φυσικούς πληθυσμούς από την Ελλάδα. Από αυτούς τους 26 πληθυσμούς, μόλις οι 4 βρέθηκαν να είναι μολυσμένοι με το βακτήριο Wolbachia και συγκεκριμένα πληθυσμοί των ειδών: Aphis fabae, Aphis hederae, Metopolophium dirhodum και Baizongia pistaciae. Τα αποτελέσματα αυτά δείχνουν για πρώτη φορά ότι η παρουσία του βακτηρίου Wolbachia στις αφίδες είναι πιθανά πιο διαδεδομένη από ότι προέκυπτε από προηγούμενες μελέτες. Επίσης, μελετήθηκε η ανίχνευση και ο χαρακτηρισμός του βακτηρίου Wolbachia στα είδη Cydia splendana, Cydia fagiglandana και Pammene fasciana. Το βακτήριο Wolbachia ανιχνεύθηκε για πρώτη φορά στα συγκεκριμένα είδη και μάλιστα διαπιστώθηκε ότι η συχνότητα εμφάνισής του ποικίλει τόσο μεταξύ των δύο ειδών Cydia όσο και μεταξύ των πληθυσμών του κάθε είδους. Στο είδος Pammene fasciana, το βακτήριο ανιχνεύθηκε σε όλα τα άτομα που μελετήθηκαν. Τα αποτελέσματα της παρούσας διατριβής συζητούνται από τη σκοπιά τόσο της οικολογικής και εξελικτικής σημασίας τους όσο και της προοπτικής χρησιμοποίησης του συμβιωτικού βακτηρίου Wolbachia για τον πληθυσμιακό έλεγχο επιβλαβών εντόμων όπως οι μύγες τσε-τσε, οι αφίδες και η καρπόκαψα καστανιάς. / Wolbachia is an intracellular and maternally inherited symbiotic bacterium that belongs to the class of Alphaproteobacteria and the order of Rickettsiales. It is the most ubiquitous intracellular symbiotic organism of the planet, since it has been estimated that over 40% of insect species, in addition to filarial nematodes, crustaceans, and arachnids are infected with Wolbachia. In arthropods Wolbachia affects the biological functions and properties of its hosts and it is responsible for a number of reproductive abnormalities, such as cytoplasmic incompatibility (CI), thelytokous parthenogenesis, feminization of genetic males and male killing. These unique biological characteristics of Wolbachia are attracting the interest of various researchers for: (a) decyphering the role of Wolbachia in evolutionary processes (mainly speciation), and (b) for its use in environmentally friendly applications for the control of agricultural pests and disease vectors. The species of genus Glossina (Diptera: Glossinidae) known as tsetse flies, have been found to be infected with Wolbachia. Tsetse flies are the sole vectors of pathogenic trypanosomes in tropical Africa, causing the “sleeping sickness” in humans and the “nagana” in animals. The potential use of Wolbachia for the control of tsetse flies, prerequisite a thorough knowledge of its genetic identity and the interactions with the host. To further characterize the prevalence of Wolbachia in tsetse flies an extensive screen of more than 5300 specimens from natural and laboratory populations of 11 different Glossina species originating from 13 African countries was carried out. Our results indicated a huge divergence in the prevalence of Wolbachia, both among the species and among populations of the same species. Further characterization by MLST and wsp genotyping was carried out for the Wolbachia strains of 29 representative populations and species of tsetse flies. An impressive genetic diversity of Wolbachia strains in tsetse flies was revealed. Interestingly, disconcordance between the phylogeny of Wolbachia and that of the tsetse flies was observed, suggesting horizontal transmission of Wolbachia during the evolution. Moreover, extended horizontal gene transfer events were detected for first time in Glossina morsitans morsitans, Glossina pallidipes και Glossina austeni. These results raise critical questions concerning: (a) the origin/mechanism of these horizontal gene transfer events, (b) their temporal determination, (c) their potential role as agents of speciation and (d) their selective appearance in only some Glossina species e.g in the subspecies Glossina morsitans centralis which is closely related with Glossina morsitans morsitans the phenomenon was not observed. Equally important will be to examine if genes from the chromosomal insertions were potentially expressed and examine if these genes are associated with the vectorial capacity of tsetse flies for the trypanosoma transmission. Finally, a negative correlation between the presence of Wolbachia with the Salivary Gland Hypertrophy Virus (SGHV) was identified. This is further discussed in the context of biological applications for control of tsetse fly-vector and trypanosomiasis. Finally in this thesis, the detection and characterization of Wolbachia in 78 specimens of 22 aphids species, from 26 natural populations, from Greece was examined. Only 4 out of 26 populations were found to be infected with Wolbachia, and specifically the species: Aphis fabae, Aphis hederae, Metopolophium dirhodum και Baizongia pistaciae. These results indicated that the presence of Wolbachia in aphids is probably more prevalent than it was derived from previous studies. Also, detection and characterization of Wolbachia in the Cydia splendana, Cydia fagiglandana and Pammene fasciana was carried out. Wolbachia was detected for first time in these species, and it was found that the prevalence of Wolbachia varies between the two species of Cydia and among populations of each species, with the infection in Pammene fasciana being fixed. At the end the ecological and evolutionary importance of Wolbachia, together with the use of the bacterium for the population control of harmful insects like tsetse flies, aphids and moths is further discussed.