O fitoplâncton é sensível às perturbações ambientais e identificar a viabilidade destes organismos é importante para o monitoramento aquático. O termo viabilidade tem sido usado neste contexto para determinar basicamente se o organismo está vivo ou morto. O uso de corantes vitais e mortais tem sido uma das técnicas aplicadas neste tipo de análise, mas ainda não se conhece a potencialidade de alguns corantes que se apliquem a espécies de fitoplâncton. Neste trabalho, foram utilizadas espécies de diferentes grupos taxonômicos mantidas em cultivo, as quais foram submetidas a uma série de corantes vitais e mortais com o objetivo de detectar a viabilidade do fitoplâcton marinho. Dentre os corantes testados, o vermelho neutro, azul de Evans e o fluorescente CMFDA tiveram os melhores resultados (observado x esperado) em testes com diferentes porcentagens de células vivas e mortas. A combinação entre o corante vital vermelho neutro e o mortal azul de Evans não foi efetiva para análise simultânea. Alexandrium tamiyavanichii foi a espécie que teve menor afinidade com os corantes. Também foram comparados diferentes métodos de observação e registro de células coradas e não coradas, provando que é possível substituir a observação direta da microscopia pela filmagem no microscópio ou pela FlowCAM. A vantagem do uso destes métodos é que além de serem mais rápidos, é possível salvar as imagens capturadas e não é necessário fazer a análise instantaneamente. O método da filmagem é vantajoso, pois é fácil de ser desenvolvido em qualquer laboratório. / Phytoplankton cells are sensitive to environmental perturbations and, therefore, identifying their viability is important for aquatic monitoring. The term viability has been used in this context to determine whether an organism is alive or dead. The use of vital and mortal stains to detect phytoplankton viability is a promising approach. In this study we investigated the efficiency of several vital and mortal dyes in detecting marine phytoplankton viability. Best results were achieved with neutral red, Evans blue and the fluorescent stain in tests with different percentages of live and dead cells. The combination of neutral red and Evans blue (vital and a mortal stains, respectively) was not effective in simultaneous analysis. Alexandrium tamiyavanichii had low affinity for any given stain. Different observational methods were compared, suggesting that direct microscopic counts can be replaced by image acquisition methods using either a microscope-mounted camera or a FlowCAM. Such imaging methods are fast, allow image archiving, and image processing can be performed on a later stage, which is useful when several experiments need to be run in a short period of time.

Evidence is presented to support the conclusions that (1) North Lake reservoir is less productive, contains lower standing crops of phytoplankton and total organic carbon than other local reservoirs; (2) that neither the phytoplankton nor their instantaneously-determined primary productivity was detrimentally affected by the power plant entrainment and (3) that the effect of the power plant is to cause nutrient limitation of the phytoplankton primary productivity by long-term, subtle, thermally-linked nutrient precipitation activities.

O fitoplâncton é sensível às perturbações ambientais e identificar a viabilidade destes organismos é importante para o monitoramento aquático. O termo viabilidade tem sido usado neste contexto para determinar basicamente se o organismo está vivo ou morto. O uso de corantes vitais e mortais tem sido uma das técnicas aplicadas neste tipo de análise, mas ainda não se conhece a potencialidade de alguns corantes que se apliquem a espécies de fitoplâncton. Neste trabalho, foram utilizadas espécies de diferentes grupos taxonômicos mantidas em cultivo, as quais foram submetidas a uma série de corantes vitais e mortais com o objetivo de detectar a viabilidade do fitoplâcton marinho. Dentre os corantes testados, o vermelho neutro, azul de Evans e o fluorescente CMFDA tiveram os melhores resultados (observado x esperado) em testes com diferentes porcentagens de células vivas e mortas. A combinação entre o corante vital vermelho neutro e o mortal azul de Evans não foi efetiva para análise simultânea. Alexandrium tamiyavanichii foi a espécie que teve menor afinidade com os corantes. Também foram comparados diferentes métodos de observação e registro de células coradas e não coradas, provando que é possível substituir a observação direta da microscopia pela filmagem no microscópio ou pela FlowCAM. A vantagem do uso destes métodos é que além de serem mais rápidos, é possível salvar as imagens capturadas e não é necessário fazer a análise instantaneamente. O método da filmagem é vantajoso, pois é fácil de ser desenvolvido em qualquer laboratório. / Phytoplankton cells are sensitive to environmental perturbations and, therefore, identifying their viability is important for aquatic monitoring. The term viability has been used in this context to determine whether an organism is alive or dead. The use of vital and mortal stains to detect phytoplankton viability is a promising approach. In this study we investigated the efficiency of several vital and mortal dyes in detecting marine phytoplankton viability. Best results were achieved with neutral red, Evans blue and the fluorescent stain in tests with different percentages of live and dead cells. The combination of neutral red and Evans blue (vital and a mortal stains, respectively) was not effective in simultaneous analysis. Alexandrium tamiyavanichii had low affinity for any given stain. Different observational methods were compared, suggesting that direct microscopic counts can be replaced by image acquisition methods using either a microscope-mounted camera or a FlowCAM. Such imaging methods are fast, allow image archiving, and image processing can be performed on a later stage, which is useful when several experiments need to be run in a short period of time.

One of the most difficult issues when dealing with optical water remote-sensing is its acceptance as a useful application for environmental research. This problem is, on the one hand, concerned with the optical complexity and variability of the investigated natural media, and therefore the question arises as to the plausibility of the parameters derived from remote-sensing techniques. Detailed knowledge about the regional bio- and chemico-optical properties is required for such studies, however such information is seldom available for the sites of interest. On the other hand, the primary advantage of remote-sensing information, which is the provision of a spatial overview, may not be exploited fully by the disciplines that would benefit most from such information. It is often seen in a variety of disciplines that scientists have been primarily trained to look at discrete data sets, and therefore have no experience of incorporating information dealing with spatial heterogeneity. <br><br> In this thesis, the opportunity was made available to assess the potential of Ocean Colour data to provide spatial and seasonal information about the surface waters of Lake Baikal (Siberia). While discrete limnological field data is available, the spatial extension of Lake Baikal is enormous (ca. 600 km), while the field data are limited to selected sites and expedition time windows. Therefore, this remote-sensing investigation aimed to support a multi-disciplinary limnological investigation within the framework of the paleoclimate EU-project ‘High Resolution CONTINENTal Paleoclimate Record in Lake Baikal, Siberia (CONTINENT)’ using spatial and seasonal information from the SeaWiFS satellite (NASA). From this, the SeaWiFS study evolved to become the first efficient bio-optical satellite study of Lake Baikal. <br><br> During the course of three years, field work including spectral field measurements and water sampling, was carried out at Lake Baikal in Southern Siberia, and at the Mecklenburg and Brandenburg lake districts in Germany. The first step in processing the SeaWiFS satellite data involved adapting the SeaDAS (NASA) atmospheric-correction processing to match as close as possible the specific conditions of Lake Baikal. Next, various Chl-<i>a</i> algorithms were tested on the atmospherically-corrected optimized SeaWiFS data set (years 2001 to 2002), comparing the CONTINENT pigment ground-truth data with the Chl-<i>a</i> concentrations derived from the satellite data. This showed the high performance of the global Chl-<i>a</i> products OC2 and OC4 for the oligotrophic, transparent waters (bio-optical Case 1) of Lake Baikal. However, considerable Chl-<i>a</i> overestimation prevailed in bio-optical Case 2 areas for the case of discharge events. High-organic terrigenous input into Lake Baikal could be traced and information extracted using the SeaWiFS spectral data. Suspended Particulate Matter (SPM) was quantified by the regression of the SeaDAS attenuation coefficient as the optical parameter with SPM field data. <br><br> Finally, the Chl-<i>a</i> and terrigenous input maps derived from the remote sensing data were used to assist with analyzing the relationships between the various discrete data obtained during the CONTINENT field work. Hence, plausible spatial and seasonal information describing autochthonous and allochthonous material in Lake Baikal could be provided by satellite data.<br>Lake Baikal, with its bio-optical complexity and its different areas of Case 1 and Case 2 waters, is a very interesting case study for Ocean Colour analyses. Proposals for future Ocean Colour studies of Lake Baikal are discussed, including which bio-optical parameters for analytical models still need to be clarified by field investigations. / Die Gewässerfernerkundung entwickelte sich seit den 70ern vor allem aus der Ozeanographie und der Atmosphärenforschung, und wird inzwischen als anerkannte Methode genutzt, um global die Phytoplanktonverteilung in den Weltmeeren erfassen zu können, u.a. für CO₂-Haushaltsmodellierungen. Atmosphärenkorrigierte Multi- und Hyperspektralscannerdaten ermöglichen die Qualifizierung bio-optischer Gewässertypen und die Quantifizierung optisch sichtbarer Wasserinhaltsstoffe und bieten gerade auch für dynamische und heterogene Küsten- und Binnengewässer das große Potential des räumlichen Informationsgewinnes.<br>Im Rahmen des Paläoklimaprojektes CONTINENT wurde in dieser Arbeit das Oberflächenwasser des Baikalsees mit Gewässerfernerkungsmethoden analysiert. Wichtig für die Interpretation von Klima-Proxies sind v.a. auch Hinweise auf die Verteilung des autochthonen Materials im Baikalsee (Fernerkundungsparameter: Chlorophyll-<i>a</i>), ebenso wie Hinweise auf allochthone Einträge an den Bohrungsstellen (Fernerkundungsparameter ‚Terrigener Eintrag’). Auf den Geländekampagnen in den Sommern 2001, 2002, 2003 in Sibirien und in Deutschland wurden Feldspektrometermessungen mit gleichzeitiger Wasserprobenahme auf die optisch sichtbaren Wasserinhaltsstoffe Phytoplankton, Schwebstoff, und DOC durchgeführt. Dabei konnten Messtechniken für Geländespektrometer evaluiert, und grundlegende Aussagen über die spektrale Verteilung des In-Wasser Lichtfeldes im Baikalsee gemacht werden. <br><br> Die Ocean Colour Satellitendaten des NASA-Instrumentes SeaWiFS und die Möglichkeiten der komplexen NASA Software SeaDAS wurden genutzt. Für die Ableitung des am Baikalsee anzutreffenden organikreichen terrigenen Eintrages, wurde ein vorläufiger Algorithmus aus den Geländedaten generiert. Verschiedene Algorithmen für den Parameter ‚Chlorophyll-<i>a</i>’ wurden mit dem Geländedatensatz der Projektpartnerin S. Fietz (Institut für Gewässerökologie und Binnenfischerei, IGB) evaluiert. Als geeignetester etablierte sich der auf oligotrophe Gewässer optimierte NASA Chlorophyll Algorithmus ‚Ocean Colour (OC) 2’. Die Quantifizierungen und Ergebnisse werden diskutiert. <br><br> Als Endergebnis wird der Überblick über Sedimenteintrag und Phytoplanktondynamik im Baikalsee für den Zeitraum 2001-2002 zur Verfügung gestellt und die autochthonen versus allochthonen Einflüsse an den Projektlokationen werden beschrieben. Der Baikalsee erwies sich als bio-optisch ein sehr komplexes und interessantes Studienobjekt. Ein wichtiger Punkt, der in dieser Arbeit angesprochen wird, ist die Atmosphärenkorrektur, die wesentliche Einflüsse auf die Qualifizierungen und Quantifizierungen hat, aber als Standardprogramm nur für den pelagialen Wasserkörper in Meeresspiegelhöhe mit marinen, bzw. Küstenatmosphären konditioniert ist. Ein weiterer bedeutender Punkt, der in dieser Arbeit diskutiert wird, ist der relevante spektrale Einfluss des organikreichen terrigenen Eintrages auf die Gewässerfarbe und dadurch auf die Qualität der Chlorophyll-Ableitung. Somit boten sich die Möglichkeiten, das räumliche Ausmaß und die Dynamik rezenter terrigener Einträge zu erfassen. Auch die Entwicklung des Phytoplankton von Frühsommer bis Spätsommer im Baikalsee konnte mit den SeaWiFS Daten nachvollzogen werden. Die hier vorgestellte Studie stellte sich als die erste grundlegende optische Gewässerfernerkundungsstudie mit Satellitendaten am Baikalsee heraus, und konnte erfolgreich abgeschlossen werden.

In urban areas, stormwater management ponds (SWPs) are built to mitigate polluted runoff. Although these ponds are increasing in numbers, their ecology is not well understood. Physical and chemical characteristics of 17 SWPs in the City of Ottawa were measured to determine the drivers of phytoplankton biomass (Chl. a) and primary production (PP). While total phosphorus was the best predictor of algal biomass in the ponds (as in lakes), the imperviousness of the catchment could also predict Chl. a. Planktonic PP in two ponds measured seasonally was more closely related to water residence time than to nutrient concentrations with rates approaching at times the theoretical maximum for aquatic systems. In one pond, whole ecosystem metabolism, estimated using diel changes in dissolved oxygen and δ18O-O2, suggested that these hypereutrophic systems were net sinks for carbon in the summer but likely sources to the atmosphere at other times of the year.

Phytoplankter sind die bedeutendsten Primärproduzenten in aquatischen Ökosystemen und leisten ca. 45 % der globalen Primärproduktion. Sie weisen eine hohe taxonomische Diversität mit vielfältigen morphologischen und physiologischen Eigenschaften auf. Funktionelle Eigenschaften, die das licht-, temperatur- und nährstoffabhängige Wachstum sowie Verlustgrößen (Fraß, Sedimentation) beschreiben, sind eine Möglichkeit Phytoplankter zu klassifizieren. Diese Einteilung gewinnt für das Verständnis und die Modellierung der Phytoplanktonsukzession (z.B. in Wassergütemodellen) immer mehr an Bedeutung, da nicht taxonomische, sondern funktionelle Eigenschaften das Vorkommen der Phytoplankter im Gewässer bestimmen. Das Wassergütemodell SALMO ist ein mechanistisches, dynamisches, vertikales 1D-Modell, welches Nährstoffe, Sauerstoff, Detritus, 4 funktionelle Phytoplanktontypen und eine Zooplanktonmischgruppe simuliert. Bei der Modellanwendung wurde ersichtlich, dass die vorhandenen funktionellen Typgruppen teilweise nicht ausreichen, um die funktionelle Diversität der realen Phytoplanktongemeinschaften adäquat widerzuspiegeln. Deshalb wird eine Erweiterung der funktionellen Typgruppen in SALMO angestrebt. Eine empirische Freilanddatenanalyse an zwei morphologisch und trophisch verschiedenen Talsperren ergab insgesamt 10 funktionelle Phytoplanktontypen (Typgruppen 1, 2 und 4 bereits in SALMO vorhanden). Die bestehenden funktionellen Eigenschaften wurden erweitert und teilweise verändert (insgesamt 10 funktionelle Eigenschaften). Die neue funktionelle Typgruppe 6 (unbewegliche, koloniale, gelatinöse Chlorophyceen) wurde in lichtabhängigen Wachstumsversuchen und Fraßversuchen mit Daphnia galeata × hyalina genauer untersucht. Als stellvertretende Art für diese Typgruppe wurde Sphaerocystis schroeteri gewählt. Die Wachstumsversuche bei 20 °C kennzeichneten Sphaerocystis als Starklichtart mit einer relativ hohen Wachstumsrate (Iopt = 250 µmol m-2 s-1; µmax = 0.96 d-1; 12:12 h Hell-Dunkelzyklus). Eigene Nährmediumsversuche wiesen auf eine Abhängigkeit von freiem CO2 hin. Dies bietet eine Erklärung für ihr häufiges Auftreten in oligo- bis mesotrophen Gewässern. Bei Anwesenheit von Daphnia konnte nach 96 h Versuchsdauer eine signifikante Erhöhung der Koloniegröße (Anteil nicht fressbarer Kolonien 3-74 %), im Vergleich zur Kontrolle (Anteil nicht fressbarer Kolonien 0-5 %), festgestellt werden. Dies stellt einen effektiven Fraßschutz gegen größenselektiv filtrierendes Zooplankton wie z.B. Daphnia dar und kann bei hohem Fraßdruck zur Dominanz der Typgruppe führen (z.B. Klarwasserphase in eutrophen Gewässern). Der Effekt war nicht durch Infochemikalien induzierbar. Aus Literaturdaten wurde eine relativ hohes Topt von 27 °C, eine nur mäßige Konkurrentstärke um Phosphor (mittlerer KP-Wert) sowie eine Brutto-Sinkgeschwindigkeit von 1.5 m d-1 entnommen werden. / Phytoplankter are the most important primary producer in aquatic ecosystems and contribute about 45 % to global primary production. Phytoplankton communities usually show an enormous taxonomical diversity. However, besides taxonomical diversity, a phytoplankton can also be characterised by its functional diversity by means of functional traits like resource-dependent growth characteristics (e.g. KI-, KP-, KN-values) or sensitivity to zooplankton grazing and sedimentation. Since functional, and not taxonomic, traits drive the phytoplankton succession, a functional classification of phytoplankton is recognised to be increasingly important for the ecological understanding and modelling of plankton succession (e.g. in water quality models). The mechanistic, dynamic, vertical 1D water quality model SALMO simulates the dynamics of nutrient concentrations (P, N), oxygen, detritus, 4 functional phytoplankton types and 1 mixed zooplankton group. Different model applications showed that the number of phytoplankton types in SALMO was sometimes not sufficient for accounting for the observed functional diversity in phytoplankton communities. Therefore, the aim of this thesis is to extend the functional diversity of phytoplankton types in SALMO. After careful evaluation of empirical data from two reservoirs with different morphology and trophic state 10 functional phytoplankton types are proposed (types 1, 2 and 4 remained unchanged). Existing functional traits in SALMO were extended and partly changed (in total 10 functional traits). For the new functional phytoplankton type 6 (non motile, colonial gelatinous green algae) light-dependent growth rates were measured and grazing experiments with Daphnia galeata × hyalina were carried out in the laboratory. For these experiments, Sphaerocystis schroeteri was chosen as representative species for this group. It is characterised by high light demand and relative high growth rates at 20 °C (µmax = 0.96 d-1, Iopt = 250 µmol m-2 s-1, 12:12 h light-dark cycle). Their growth depends on the availability of free CO2. This explains the common occurrence in oligo-mesotrophic water bodies. The range of the colony sizes of Sphaerocystis increased in the presence of Daphnia significantly (portion of inedible colonies 3-74 %) in contrast to the control (portion of inedible colonies 0-5 %). This was induced by direct size-selective grazing and not by infochemicals. Thus, Sphaerocystis has evolved an effective defence mechanism against size-selective filter-feeding zooplankton and is competitive superior at high zooplankton grazing pressure (e.g. clear water stage in eutrophic waters). The lack of experimentally derived parameters for temperature- and phosphorus-depending growth (Tmin, Topt, KP-value) as well as gross sinking velocity was complemented with literature data. The alga is only moderately competitive for phosphorus and exhibits relatively high minimal and optimal growth temperatures (Tmin = 7 °C, Topt = 27 °C). Since type 6 consists of large, non motile species, gross sinking velocity was estimated to be about 1.5 m d-1.

In urban areas, stormwater management ponds (SWPs) are built to mitigate polluted runoff. Although these ponds are increasing in numbers, their ecology is not well understood. Physical and chemical characteristics of 17 SWPs in the City of Ottawa were measured to determine the drivers of phytoplankton biomass (Chl. a) and primary production (PP). While total phosphorus was the best predictor of algal biomass in the ponds (as in lakes), the imperviousness of the catchment could also predict Chl. a. Planktonic PP in two ponds measured seasonally was more closely related to water residence time than to nutrient concentrations with rates approaching at times the theoretical maximum for aquatic systems. In one pond, whole ecosystem metabolism, estimated using diel changes in dissolved oxygen and δ18O-O2, suggested that these hypereutrophic systems were net sinks for carbon in the summer but likely sources to the atmosphere at other times of the year.

[Truncated abstract] This work was the first large-scale biological oceanographic study to be undertaken in the coastal eastern Indian Ocean adjacent to Western Australia, and covered both northwest (Exmouth Peninsula to the Abrolhos Islands) and southwest (Cape Naturaliste to Cape Leeuwin) regions. The study area was dominated by the Leeuwin Current (LC), an anomalous eastern boundary current that transports tropical water poleward and prevents deep nutrients from reaching the surface by creating large-scale downwelling. Indeed, LC and offshore waters were consistently associated with low nitrate concentrations and low phytoplankton biomass and production (< 200 mg C m-2 d-1). However, the physical forcing of the LC was offset, during the summer months, by upwelling associated with wind-driven inshore countercurrents (Ningaloo and Capes Currents), which provided a mechanism to access high nutrient concentrations normally confined to the base of the LC. ... Limited seasonal investigations off the Capes region of southwestern Australia showed that the winter production scenario can be very different than summer conditions, with strong Leeuwin Current flow that meanders onto the continental shelf and entrains seasonally nutrient-enriched shelf waters. However, production in the LC was still low (≤450 mg C m-2 d-1) due to light limitation resulting from both increased light attenuation and reduced surface irradiance characteristic of the winter months. This investigation provides fundamental knowledge on physical-biological coupling off Western Australia, with implications for fisheries management in view of seasonal and inter-annual variability in the strength of both the Leeuwin Current and inshore countercurrents.

[Truncated abstract] The role of marine microzooplankton in aquatic food webs has been studied in most regions of the world’s oceans, with the exception of the subtropical/temperate eastern Indian Ocean. This thesis addresses this gap in knowledge by investigating microzooplankton from five stations on a cross continental shelf transect and in two mesoscale features ∼300 km offshore of south west Western Australia. My primary focus was to measure and evaluate microzooplankton community change over space and time and their impact on phytoplankton on a cross shelf transect, sampling five stations from February 2002 December 2004 as part of a large multidisciplinary investigation into the pelagic ecosystem on the shelf (Chapter 2). This transect was named the Two Rocks transect. I also investigated an eddy pair (Chapter 5), which had originated from water in the vicinity of the Two Rocks transect, also undertaken as part of a larger study, investigating biophysical coupling within mesoscale eddies off south west Western Australia . . . The distribution of mixotrophic cells differed across the transect. Those mixotrophs that use photosynthesis as their primarily energy source exploited nutrient limited conditions inshore consuming particles, while mixotrophs that are primarily heterotrophic survived low prey conditions offshore by photosynthesizing. In the eddies, the grazing behaviour of microzooplankton was dependent on the specific phytoplankton assemblage in each eddy. The warm core eddy had a resident population of diatoms that were consumed by heterotrophic dinoflagellates present in high numbers. The cold core eddy had a warm cap which prevented upwelled water reaching the surface, resulting in stratification and a very active microbial food web, particularly in the surface.

Thesis (M.S.)--Indiana University, 2007. / Department of Earth Sciences, Indiana University-Purdue University Indianapolis (IUPUI). Advisor(s): Li Lin, Lenore P. Tedesco, Jeffrey S. Wilson. Includes vitae. Includes bibliographical references (leaves 145-149).