Il est de plus en plus admis que pour comprendre le fonctionnement des écosystèmes, une approche aérienne associée à une approche souterraine est nécessaire en raison des rétroactions entre plantes et sol. La structure des communautés végétales peut affecter le fonctionnement du sol en altérant la quantité et la qualité des ressources intégrant le sol. Les contrôles abiotiques des processus microbiens du sol sont largement documentés, mais les potentiels effets de la composition de la communauté végétale et des traits racinaires sont peu connus. L'étude a été menée sur des prairies méditerranéennes du sud de la France. Nous avons sélectionné 12 communautés contrastées le long d'un gradient de disponibilité des ressources du sol principalement lié à la texture du sol. Les objectifs de cette thèse sont d'évaluer i) la réponse de la composition floristique et des traits foliaires et racinaires mesurés au niveau de la communauté le long gradient édaphique et à travers les saisons, et ii) leurs effets sur trois processus microbiens du sol impliqués dans les cycles du carbone (C) et de l'azote (N) : la respiration potentielle (SIR), la nitrification (NEA) et la dénitrification (DEA). Dans les sols sableux (parcelles peu productives), la communauté végétale possède une stratégie de conservation au niveau des feuilles et une stratégie d'acquisition des ressources au niveau des racines suggérant une forte plasticité des traits racinaires en réponse à la limitation des ressources ; les taux de SIR et NEA sont élevés. Un patron opposé est observé dans les sols argileux des milieux productifs. La DEA ne varie pas le long du gradient. Aucun effet de la richesse spécifique, de l'équitabilité ou de la biomasse végétale sur la SIR ou la NEA n'a été trouvé. Cependant, nous avons démontré qu'il y a une forte influence de la composition fonctionnelle des communautés végétales (abondance des graminoïdes), et surtout des traits racinaires. Nos résultats les plus novateurs montrent que la NEA et dans une moindre mesure la SIR sont positivement corrélés à la concentration en N des racines de la communauté et négativement corrélés à leur ratio C/N, tandis que les traits foliaires analogues ont seulement un effet mineur sur les activités microbiennes. Ces résultats suggèrent que la qualité chimique des racines est le principal pilote des activités du sol et que cela est maintenu à travers les saisons. D'importantes variations saisonnières de la composition floristique des communautés, de leurs traits racinaires et des activités microbiennes, excepté la DEA, ont été mises en avant. Les variations saisonnières des traits racinaires sont interprétées comme un changement relatif de la proportion de racines jeunes/vieilles et suggèrent une asynchronie entre la croissance aérienne et souterraine. Pour la première fois, nous montrons qu'en conditions naturelles, les changements saisonniers des traits fonctionnels racinaires peuvent être impliqués dans le pilotage de la NEA et de la SIR. Ce résultat démontre la nécessité d'études plus approfondies pour comprendre le rôle des traits racinaires comme pilote du fonctionnement du sol. / It is increasingly recognized that the understanding of ecosystem functioning requires a combined above- and belowground approach, because of the importance of feedbacks between plants and soil. Plant community structure may affect soil functioning by altering the quantity and the quality of resources entering the soil. Abiotic controls on soil microbial processes are well documented, but potential effects of plant composition and root traits are poorly understood. The study was conducted in Mediterranean grasslands located in southern France. We selected 12 contrasting communities along a gradient of soil resource availability, which is mainly driven by soil texture. The aims of the thesis were to evaluate: i) the response of plant composition and leaf and root traits measured at the community level along the soil gradient and across seasons, ii) their effect on three soil microbial processes involved in carbon (C) and nitrogen (N) cycling, i.e. substrate-induced respiration (SIR), nitrifying (NEA) and denitrifying enzyme activities (DEA). In sandy soils (unproductive plots) plant communities had a conservation strategy at the leaf level and an acquisitive strategy at the root level suggesting a strong plasticity of root traits in response to resource limitation; rates of SIR and NEA were higher. Opposite pattern was observed in clay productive soils. DEA did not vary along the gradient. We did not find evidence of a species richness, evenness, or plant biomass effect on SIR and NEA. However, we demonstrated that they were strongly influenced by plant functional composition (abundance of graminoids), and particularly by root traits. Our most innovative finding evidences that NEA, and to a lesser extent SIR, were positively correlated with root nitrogen (N) concentration and negatively correlated with C/Ncom, whereas analogous leaf traits have only minor effect on microbial activities. Our results suggested that the chemical quality of roots is the main driver of soil activities and this was confirmed across the seasons. We highlight strong seasonal variations in plant community composition, root traits and soil microbial activity, except DEA. Seasonal variations in root traits were interpreted as a relative change in the proportion of young versus old roots and suggested an asynchrony between above– and belowground growth. We showed for the first time evidences that in natural conditions, seasonal changes in root functional traits could be implicated in driving NEA and SIR. This result demonstrates the need to further develop studies allowing a better understanding of the role of root traits as soil functioning drivers.

In this study, geographic information systems (GIS) and remote sensing (RS) tools were integrated and used to investigate the plant species diversity of the Nallihan forest ecosystem. Two distinct indices, Shannon Wiener and Simpson, were employed in order to express species diversity. The relationships between the indices and pertinent independent variables (topography, geology, soil, climate, supervised classes, and Normalized Difference Vegetation Index (NDVI) classes) were investigated to develop two distinct models for each index. After detecting important components with factor analysis, two models were developed by using multiple regression statistics. Running the models, two plant species diversity maps in grid format were produced. The validity of the models were tested by (1) mapping residuals to predict the locations where the models work perfectly, and (2) logical interpretations in ecological point of view. Elevation and climatic factors formed the most important component that are effective on plant species diversity. Geological formations, soil, land cover and land-use characteristics were also found influential for both models. Considering the disturbance and potential evapotranspiration (PET), the model developed for Shannon Wiener index was found out more suitable comparing the model for Simpson index.

Etant donné le rôle clé des grands herbivores sur la diversité végétale spécifique et fonctionnelle, notre objectif était de mieux comprendre la relation entre l'herbivorie et les communautés végétales principalement à une échelle spatiale fine, afin de concilier des objectifs de gestions des populations et de conservation de la flore. Pour cela, nous avons abordé cette problématique en intégrant des approches taxonomiques et fonctionnelles, et en étudiant les interactions aux niveaux inter- et intra-spécifiques. Nous avons combiné les informations de trois bases de données : (1) des données de régime alimentaire issus d'analyses d'ADN metabarcoding réalisées sur des faeces de chamois (Rupicapra rupicapra), chevreuil (Capreolus capreolus) et mouflons (Ovis gmelini musimon) du Massif des Bauges, (2) des données sur les caractéristiques des communautés végétales (composition floristique, biomasse, phénologie), (3) des données de traits fonctionnels des plantes. L'analyse de variabilité intra-spécifique des trois grands herbivores nous a permis de valider l'hypothèse de variation de niche (NVH) de Van Valen au niveau intra-spécifique mais aussi au niveau inter-spécifique, soit une relation positive entre la largeur de niche de l'espèce et sa variabilité intra-spécifique. Ensuite, grâce à deux populations de chamois d'alpage, l'une vivant en sympatrie avec le mouflon et l'autre vivant en allopatrie, nous avons pu mettre en évidence l'absence d'effets négatifs de la population introduite de mouflon sur le régime alimentaire de la population native de chamois, autant au niveau de la niche alimentaire taxonomique que fonctionnelle. L'analyse des critères de sélection alimentaire nous a finalement permis de mettre en avant des différences de critères de choix entre les deux espèces à certaines saisons, expliquant ainsi partiellement le partitionnement des niches taxonomiques et fonctionnelles entre les deux espèces. Par ailleurs, les scénarios proposés d'évolution de la sélection alimentaire au cours de l'année pour les deux espèces concordaient avec les caractéristiques morphologiques spécifiques à l'espèce d'ongulé. Finalement, contrairement à la littérature où aucune étude n'était capable de discriminer les effets directs et indirects des traits fonctionnels à cause de corrélations, nous avons pu, grâce à des analyses de pistes, démontrer que, dans la plupart des cas, les traits biomécaniques avaient un effet direct sur le choix alimentaire alors que les traits chimiques n'avaient qu'un effet indirect. Enfin, d'un point de vue méthodologique, nous conseillons l'utilisation d'indices d'azote fécaux uniquement dans l'étude de la variation à long terme de la qualité des régimes de manière spécifique à chaque espèce et chaque site, et non pas pour comparer des qualités de régime entre espèces ni pour étudier les variations fines à l'échelle intra-saisonnière. La complémentarité des approches nous a permis de mieux appréhender la structuration des communautés d'herbivores, et devrait nous aider à mieux évaluer l'état actuel et l'évolution des relations entre individus, entre espèces et avec leur environnement.Mots-clés : ongulés, interactions intra- et inter-spécifiques, approche taxonomique et fonctionnelle, ADN metabarcoding, NIRS, massif des Bauges, sélection alimentaire / Given the key role of large herbivores on species and functional plant diversity, we aimed at better understanding the relationship between herbivory and plant communities mainly at a fine-scale, in order to reconcile objectives of population management and plant conservation. For this purpose, we used both taxonomic and functional approaches, and studied interactions at the inter- and intra-specific levels. We combined information coming from three databases: (1) diet data from DNA-metabarcoding applied on chamois (Rupicapra rupicapra), roe deer (Capreolus capreolus) and mouflon (Ovis gmelini musimon) faeces from the Bauges Massif, (2) characteristics of plant communities (plant composition, biomass, phenology), (3) plant functional traits. Analyses of intra-specific variability of the three large herbivores allowed us to upscale the niche variation hypothesis (NVH) of Van Valen from the intra- to the inter-specific level, i.e. we observed a positive relationship between the species niche breadth and among-individual variation. Then, based on two chamois subpopulations living in pastures, one living in sympatry with the mouflon and the other living in allopatry, we revealed the absence of negative effects of the introduced mouflon population on native chamois population diet, both for the taxonomic and functional dietary niche. Analyses of diet selection criteria allowed us to highlight differences in choice criteria between chamois and mouflon in some seasons, which helped to explain the taxonomic and functional niche partitioning of the two species. Furthermore, the proposed scenario of the evolution of diet selection over the year for both species were consistent with ungulate-specific morpho-physiological features. Finally, contrary to the literature where no studies could discriminate the direct and indirect effects of functional traits on diet selection because of correlations, we used path analyses, which allowed us to show that in most cases, biomechanical traits had a direct effect on diet choices, whereas chemical traits had an indirect effect. Furthermore, from a methodological point of view, we advised to use nitrogen fecal indices only to study the evolution of species-specific and location-specific population long-term diet quality, but not to compare diet quality between species, nor to study slight fluctuations at the intra-seasonal level. The complementarity of the approaches allowed us to better account for the structuration of herbivore communities, which should help to better assess the actual state and the evolution of relationships among individuals, species and their environment.Key-words: ungulates, intra- and inter-specific interactions, taxonomic and functional approach, DNA metabarcoding, NIRS, Bauges Massif, diet selection

Diversos estudos teóricos, experimentais e observacionais têm demonstrado que as relações entre a biodiversidade e as funções ecossistêmicas (BEF) são determinadas pela estrutura funcional da comunidade (ou seja, pela distribuição dos atributos das suas espécies constituintes). Isso pode ocorrer por meio de dois mecanismos mutuamente não exclusivos: (1) a hipótese de dominância (também denominada de efeito de relação de massa), na qual os processos ecossistêmicos são influenciados pela média ponderada na comunidade de um dado atributo funcional (CWM) considerado relevante; (2) a hipótese de complementaridade, na qual a maior variabilidade de um atributo funcional na comunidade (FD) é uma expressão da complementariedade de nicho, o que beneficia o desempenho dos processos ecossistêmicos. Embora ambos os mecanismos já tenham sido amplamente estudados em comunidades de plantas em pequenas escalas espaciais, análises globais considerando distintos biomas ainda são necessárias. Neste estudo, a relação entre biodiversidade e funcionamento dos ecossistemas foi avaliada com base na integração entre uma base de dados global de parcelas de vegetação (sPlot), uma base de dados de atributos de espécies de plantas (TRY) e dados do Índice de Vegetação por Diferença Normalizada (NDVI) obtidos por sensoriamento remoto. O objetivo foi verificar, simultaneamente, os efeitos de dominância e de complementaridade sobre a produção de biomassa vegetal em ecossistemas campestres em todo o mundo. Os dados sobre a estrutura funcional das comunidades (CWM e FD) foram obtidos a partir da base de dados sPLOT e TRY, utilizando para isso atributos funcionais de plantas ecologicamente relevantes. O NDVI, considerado como aproximação da produtividade da vegetação, representa uma medida do funcionamento do ecossistema e foi obtido a partir do produto MOD13Q do sensor MODIS, com resolução espacial de 250m. Para garantir que as medidas de NDVI fossem derivadas apenas de ecossistemas campestres, sem a interferência de outras fisionomias vegetais, foram descartadas as parcelas do sPlot com presença de paisagens heterogêneas no seu entorno mediante consulta a um mapa global de cobertura e uso da terra (Globcover2009). Para quantificar os efeitos independentes da dominância e da complementariedade sobre as variações no NDVI , com controle das variáveis climáticas, foi utilizada uma análise de regressão múltipla do tipo commonality. Os resultados demonstraram que o principal preditor da variação no NDVI correspondeu a um conjunto de atributos funcionais das espécies dominantes relacionados com o espectro de economia da comunidade vegetal (atributos fast-slow), indicando a prevalência da hipótese de dominância (R2 ajustado = 0,65). Os efeitos evidentes da dominância e os efeitos potenciais da complementariedade são discutidos no contexto da sua relação com os fatores abióticos, sendo que a precipitação pluviométrica, em particular, parece ter maior influência tanto sobre a composição de atributos quanto sobre a produtividade. Apesar de algumas limitações metodológicas, a abordagem inovadora utilizada neste trabalho pode ajudar a esclarecer as relações entre biodiversidade e funções ecossistêmicas em escala global, dentro de uma perspectiva integradora e baseada em dados. / Theoretical, experimental and observational studies show that biodiversity ecosystem functioning (BEF) relationships are determined by functional community structure (i.e. trait distributions in a community) through two mutually non-exclusive mechanisms: (1) The dominance hypothesis (a.k.a. mass ratio effect) links ecosystem processes to the community weighted mean (CWM) of a relevant effect trait. (2) The complementarity hypothesis states that higher variability of a trait value within a community (FD) reflects niche complementarity enhancing ecosystem processes. While both mechanisms have been extensively studied in plant communities at small spatial scales, there is a need for global analyses across biomes. Here, a data driven approach to the BEF question is presented integrating a global vegetation plot database with a trait database and remotely sensed NDVI. The objective of this study was to simultaneously evaluate dominance and complementarity effects in grassland systems worldwide. Data on functional community structure (CWM and FD) were obtained from the global vegetation plot database sPlot in combination with the plant trait database TRY using 18 ecologically relevant plant traits. Ecosystem functioning at the selected sPlot sites (n = 2941) was measured as NDVI at a spatial resolution of 250m using the MODIS product MOD13Q (annual peak NDVI being a proxy of productivity). The landcover map Globcover2009 was used for characterization of landscape heterogeneity and landcover at each site, and plots in heterogeneous non-grassland pixels were discarded. Multiple regression commonality analysis was used to disentangle the contributions of complementarity and dominance effects to the variation in NDVI, while controlling for climate variables (adjusted R2 = 0.65). The results show that a plant community economics spectrum referring to the “fast-slow traits” of the dominant species in the community was the strongest predictor of the NDVI values in the grassland systems (dominance effect). Both, evident dominance and potential complementarity effects are discussed against the background of their interplay with abiotic factors and it is noted that especially precipitation seems to drive trait composition and productivity. Despite methodological shortcomings, the novel approach presented in this paper is considered a step towards a more integrative data-driven BEF debate at the global scale

En Europe tempérée, les paysages sont dominés par une mosaïque de forêts, prairies et cultures depuis plusieurs siècles. Cette longue période de temps a permis la spécialisation d'espèces au sein des habitats et de leurs interfaces grâce à de forts contrastes environnementaux. Cependant, de fréquents changements d'occupation du sol ont eu lieu par le passé, lesquels se sont accélérés dans les dernières décennies, remettant en cause la stabilité des communautés végétales et de leur environnement. L'afforestation d'anciennes prairies et l'extension de prairies par déforestation, le plus souvent issues de la progression et de la régression d'anciennes lisières, n'ont que peu été étudiées. Au sein des interfaces foret-prairie, en plus d'un effet lisière induit au sein de chaque habitat par la proximité de l'habitat adjacent, un effet histoire peut s'ajouter au sein des habitats récents, c'est-à-dire un héritage environnemental et/ou floristique (dette d'extinction, crédit de colonisation). Au sein des lisières d'habitats récents, une interaction entre effet lisière et effet histoire peut également être rencontrée. Dans cette thèse, les objectifs ont été d'évaluer l'influence relative de l'effet lisière et de l'effet histoire le long d'interfaces forêt-prairie stables, issues d'afforestation et issues de déforestation en s'intéressant (i) aux conditions environnementales, (ii) à la richesse et à la composition floristique des communautés végétales, et (iii) aux valeurs de traits au sein des communautés. Nos résultats ont montré des gradients croissants d'intensité lumineuse et de nutriments des sols allant des lisières aux cœurs de prairies. En réponse à ces gradients, un fort effet lisière sur la composition des communautés végétales a été trouvé en prairie. Ces différences floristiques entre lisières et cœurs de prairies s'expliquent par la présence d'un grand nombre d'espèces transgressives parmi les espèces spécialistes de forêt, lesquelles ont des valeurs de traits favorisant leur transgression en prairie. A côté de cela, une dette d'extinction d'espèces spécialistes de prairie a été trouvée au sein des forêts récentes, laquelle est responsable d'une hauteur végétative plus importante par rapport aux forêts anciennes. Ces résultats s'expliquent par une intensité lumineuse restée plus élevée au sein des forêts récentes, même après plusieurs décennies. Une dette d'extinction d'espèces spécialistes de forêt a aussi été mise en évidence en lisière de prairie récente, laquelle est le résultat d'une interaction entre effet lisière et effet histoire. En prairie récente, l'effet lisière favorise le maintien des espèces forestières. D'après nos résultats, les lisières de forêt et de prairie, dont la plupart ont subit un déplacement au cours des deux derniers siècles, hébergent de nombreuses espèces végétales spécialistes des habitats anciens, parfois en dette d'extinction. Une réévaluation de la distribution des espèces au sein des communautés végétales de forêts et prairies semble alors nécessaire en tenant en compte de l'histoire des habitats. Face à l'instabilité croissante des forêts et prairies, l'identification des espèces en dette d'extinction représente une chance pour la conservation et la restauration de la biodiversité végétale / In temperate Europe, landscapes are dominated by a mosaic of forests, grasslands and crops since several centuries. This long period of time allowed the specialization of species within the habitats and their interfaces thanks to strong environmental contrasts. However, there have been frequent land-use changes in the past, which have accelerated in recent decades, challenging the stability of plant communities and their environment. The afforestation of former grasslands and the extension of grasslands by deforestation, mostly resulting from the progression and regression of the edges, have been poorly studied. In the forest-grassland interfaces, in addition to an edge effect induced in each habitat by the proximity to the adjacent habitat, a history effect can be added in recent habitats, i.e. an environmental and/or floristic legacy (extinction debt, colonization credit). In the recent habitat edges, an interaction between edge effect and history effect can also be encountered. In this thesis, the objectives were to evaluate the relative abundance of the edge effect and the history effect along forest-grassland interfaces stable, from afforestation process and from deforestation process, by studying (i) environmental conditions, (ii) the richness and floristic composition of plant communities, and (iii) trait values within communities. Our results showed increasing gradients of light intensity and soil nutrients ranging from grassland edges to grassland cores. In response to these gradients, a strong edge effect on the composition of plant communities was found in grasslands. These floristic differences between grassland edges and grassland cores are explained by the presence of a large number of transgressive species among the forest specialist species, which have trait values favoring their transgression in grasslands. Besides this, an extinction debt of grassland specialist species has been found in recent forests, which is responsible for a higher vegetative height compared to ancient forests. These results can be explained by the fact that light intensity remained higher in recent forests, even after several decades. An extinction debt of forest specialist species has also been demonstrated in the recent grassland edges, which is the result of an interaction between edge effect and history effect. In recent grasslands, the edge effect favors the maintenance of forest species. According to our findings, forest and grassland edges, most of which have been displaced over the past two centuries, are home to many plant species that are habitat specialists, sometimes in extinction debt. A re-evaluation of the distribution of species within forest and grassland plant communities then seems necessary, taking into account the history of habitats. In a context of increasing forests and grasslands instability, the identification of species in extinction debt represents an opportunity for the conservation and restoration of plant biodiversity

L’intensification de l’agriculture et la simplification biologique des agroécosystèmes conduit à une perte des fonctions écosystémiques tandis que le contrôle chimique des bioagresseurs (BAG) n’est pas durable. La diversification des agroécosystèmes est plébiscitée de manière croissante pour restaurer les interactions positives entre les plantes, telles que la régulation des BAG, au bénéfice des cultures. Mais la diversification bien qu’elle implique un partage des ressources ne doit pas se faire au détriment des rendements. Si la diversité végétale est le support de services de régulation des BAG, quel devrait être le niveau de ces régulations pour compenser les pertes de rendement liées à la compétition pour les ressources ? Quelles devraient-être la composition et la structure de la communauté de plantes pour optimiser de façon synergique les régulations de multiple BAG et la production ? J’ai d’abord quantifié par modélisation théorique les niveaux minimum de régulation des BAG requis pour compenser les pertes de rendement dues à la compétition, dans différents scénarios d’association et de ressources. J’ai ensuite réalisé une étude de terrain pour étudier les régulations écologiques de trois importants BAG du bananier dans un gradient de complexité végétale. Enfin, j’ai quantifié la part d’écart de rendement attribuable aux BAG et aux ressources. Je discute des interactions entre dégâts des BAG et compétition pour les ressources à l’échelle de la plante, des mécanismes de régulations écologiques des BAG du bananier et de la gestion de la végétation à l’échelle de la parcelle pour la régulation synergique des BAG et l’optimisation des rendements. / Agriculture intensification and biological simplification of agroecosystems lead to the loss of ecosystem functions while chemical control of pests is not sustainable. Agroecosystem plant diversification is increasingly recognized as a way to restore positive interactions among plants benefiting crops, such as pest regulations. But diversification that causes resource sharing must not be done at yields’ expense. If vegetation complexity is the basis for pest regulation services, what should be the level of the regulations to compensate for yield losses due to competition for resources? What should be the composition and structure of the plant community to synergistically optimize multiple pest regulations and yields? First, I quantified by theoretical modeling the minimal levels of pest regulation required to compensate for yield losses due to competition in various association and resource scenarios. I then conducted a field study to study the ecological regulations of three important pests of bananas along a vegetation complexity gradient. Finally, I quantified the amount of yield losses attributable to pests and resources. I discuss the interactions between pest damage and resource competition at plant scale, the mechanisms implied in ecological regulations of the three banana pests and the management of the plant community at field scale for the synergic regulation of multiple pests and yield optimization.

Diversos estudos teóricos, experimentais e observacionais têm demonstrado que as relações entre a biodiversidade e as funções ecossistêmicas (BEF) são determinadas pela estrutura funcional da comunidade (ou seja, pela distribuição dos atributos das suas espécies constituintes). Isso pode ocorrer por meio de dois mecanismos mutuamente não exclusivos: (1) a hipótese de dominância (também denominada de efeito de relação de massa), na qual os processos ecossistêmicos são influenciados pela média ponderada na comunidade de um dado atributo funcional (CWM) considerado relevante; (2) a hipótese de complementaridade, na qual a maior variabilidade de um atributo funcional na comunidade (FD) é uma expressão da complementariedade de nicho, o que beneficia o desempenho dos processos ecossistêmicos. Embora ambos os mecanismos já tenham sido amplamente estudados em comunidades de plantas em pequenas escalas espaciais, análises globais considerando distintos biomas ainda são necessárias. Neste estudo, a relação entre biodiversidade e funcionamento dos ecossistemas foi avaliada com base na integração entre uma base de dados global de parcelas de vegetação (sPlot), uma base de dados de atributos de espécies de plantas (TRY) e dados do Índice de Vegetação por Diferença Normalizada (NDVI) obtidos por sensoriamento remoto. O objetivo foi verificar, simultaneamente, os efeitos de dominância e de complementaridade sobre a produção de biomassa vegetal em ecossistemas campestres em todo o mundo. Os dados sobre a estrutura funcional das comunidades (CWM e FD) foram obtidos a partir da base de dados sPLOT e TRY, utilizando para isso atributos funcionais de plantas ecologicamente relevantes. O NDVI, considerado como aproximação da produtividade da vegetação, representa uma medida do funcionamento do ecossistema e foi obtido a partir do produto MOD13Q do sensor MODIS, com resolução espacial de 250m. Para garantir que as medidas de NDVI fossem derivadas apenas de ecossistemas campestres, sem a interferência de outras fisionomias vegetais, foram descartadas as parcelas do sPlot com presença de paisagens heterogêneas no seu entorno mediante consulta a um mapa global de cobertura e uso da terra (Globcover2009). Para quantificar os efeitos independentes da dominância e da complementariedade sobre as variações no NDVI , com controle das variáveis climáticas, foi utilizada uma análise de regressão múltipla do tipo commonality. Os resultados demonstraram que o principal preditor da variação no NDVI correspondeu a um conjunto de atributos funcionais das espécies dominantes relacionados com o espectro de economia da comunidade vegetal (atributos fast-slow), indicando a prevalência da hipótese de dominância (R2 ajustado = 0,65). Os efeitos evidentes da dominância e os efeitos potenciais da complementariedade são discutidos no contexto da sua relação com os fatores abióticos, sendo que a precipitação pluviométrica, em particular, parece ter maior influência tanto sobre a composição de atributos quanto sobre a produtividade. Apesar de algumas limitações metodológicas, a abordagem inovadora utilizada neste trabalho pode ajudar a esclarecer as relações entre biodiversidade e funções ecossistêmicas em escala global, dentro de uma perspectiva integradora e baseada em dados. / Theoretical, experimental and observational studies show that biodiversity ecosystem functioning (BEF) relationships are determined by functional community structure (i.e. trait distributions in a community) through two mutually non-exclusive mechanisms: (1) The dominance hypothesis (a.k.a. mass ratio effect) links ecosystem processes to the community weighted mean (CWM) of a relevant effect trait. (2) The complementarity hypothesis states that higher variability of a trait value within a community (FD) reflects niche complementarity enhancing ecosystem processes. While both mechanisms have been extensively studied in plant communities at small spatial scales, there is a need for global analyses across biomes. Here, a data driven approach to the BEF question is presented integrating a global vegetation plot database with a trait database and remotely sensed NDVI. The objective of this study was to simultaneously evaluate dominance and complementarity effects in grassland systems worldwide. Data on functional community structure (CWM and FD) were obtained from the global vegetation plot database sPlot in combination with the plant trait database TRY using 18 ecologically relevant plant traits. Ecosystem functioning at the selected sPlot sites (n = 2941) was measured as NDVI at a spatial resolution of 250m using the MODIS product MOD13Q (annual peak NDVI being a proxy of productivity). The landcover map Globcover2009 was used for characterization of landscape heterogeneity and landcover at each site, and plots in heterogeneous non-grassland pixels were discarded. Multiple regression commonality analysis was used to disentangle the contributions of complementarity and dominance effects to the variation in NDVI, while controlling for climate variables (adjusted R2 = 0.65). The results show that a plant community economics spectrum referring to the “fast-slow traits” of the dominant species in the community was the strongest predictor of the NDVI values in the grassland systems (dominance effect). Both, evident dominance and potential complementarity effects are discussed against the background of their interplay with abiotic factors and it is noted that especially precipitation seems to drive trait composition and productivity. Despite methodological shortcomings, the novel approach presented in this paper is considered a step towards a more integrative data-driven BEF debate at the global scale

Explicar os padrões de diversidade de espécies e entender os processos que geram e mantêm essa diversidade na natureza é um dos grandes objetivos da Ecologia. A teoria clássica de competição prevê que duas espécies só podem coexistir quando há divergência no uso de recursos. Portanto, há um limite de similaridade imposto pela competição entre as espécies, que leva à co-ocorrência de espécies com estratégias ecológicas mais diferentes entre si. Por outro lado, o ambiente físico pode impor restrições às possíveis estratégias ecológicas das espécies. Ambientes com limitações de recursos ou condições desfavoráveis permitem apenas a sobrevivência de espécies com estratégias mais similares, um processo conhecido como filtro ambiental. Dois processos podem então gerar padrões antagônicos na estrutura das comunidades, selecionando estratégias ecológicas mais parecidas ou mais diferentes entre si. Há ainda a possibilidade de que os dois processos ou mesmo nenhum dos dois seja importante na estruturação das comunidades, levando a um padrão aleatório ou neutro. Utilizando-se das contribuições proporcionais (elasticidades) das três taxas vitais demográficas - sobrevivência, crescimento e fecundidade - para a taxa de crescimento populacional para inferir as estratégias ecológicas das espécies de árvores de uma comunidade, nos propusemos a responder a pergunta: \"Qual processo é responsável pela estruturação de comunidades de árvores tropicais?\". O trabalho foi realizado em uma parcela permanente de 10,24 hectares na Restinga da Ilha do Cardoso, São Paulo. Todos os indivíduos com mais de 15cm de perímetro à altura do peito foram marcados, identificados e tiveram seus diâmetros à altura do peito registrados para dois censos. As elasticidades das três taxas vitais para 89 espécies de árvores foram obtidas por meio de um modelo de projeção integral (IPMs). Os IPMs são ferramentas modernas mais robustas que os clássicos modelos matriciais, comumente utilizados em estudos demográficos. Definimos um espaço ecológico no triângulo onde as estratégias ecológicas das espécies são classificadas de acordo com as elasticidades das três taxas demográficas. Construímos também uma filogenia molecular específica para a comunidade baseada nos marcadores cloroplásticos rbcL e matK, com a qual obtivemos as distâncias entre todos os pares de espécies. Calculamos o sinal filogenético das estratégias ecológicas por meio da correlação entre a distância entre as espécies no espaço ecológico e suas distâncias filogenéticas. Aceitamos a premissa de conservação das estratégias ecológicas na filogenia. As espécies puderam ser classificadas em quatro grupos demográficos distintos no espaço ecológico, distribuídos principalmente no eixo crescimento-sobrevivência, o que é esperado para árvores. Não há sinal filogenético para as estratégias ecológicas, o que indica que ambos os processos ou nenhum dos dois processos é importante na estruturação dessa comunidade. Nosso trabalho traz uma nova abordagem metodológica e resultados que contradizem a literatura recente, em que a importância dos filtros ecológicos na estruturação de comunidades tropicais é repetidamente encontrada. A confirmação deste padrão para outras comunidades poderá colaborar para o melhor entendimento dos processos estruturadores das comunidades tropicais. / One of Ecology\'s biggest goals is to explain the patterns of species\' diversity and to understand the processes that generate and maintain this diversity in natural communities. Classical competition theory predicts that two species will be able to coexist only when there is divergence in the use of resources, i.e., competition imposes a limiting similarity among species that allows co-occurrence of species with divergent ecological strategies. On the other hand, the physical environment may impose restrictions to the range of possible ecological strategies of species. Environments with limited resources or adverse conditions will allow the survival of species with more specific strategies, a process known as environmental filtering. These two processes will generate opposite effects on the structure of communities, as more similar or more different ecological strategies will be selected. There is still the possibility that both processes are occurring simultaneously, or neither are important for the community. In both cases, a neutral or random pattern is expected. Using the proportional contribution (elasticities) of the three demographic vital rates - survival, growth and fecundity - to the finite rate of increase of population as a mean of inferring the ecological strategy of trees in a community, we intended to answer the question: \"What process is responsible for the structuring of tropical tree communities?\". Data was collected in a Restinga forest 10.24 ha permanent plot. All individuals with more than 15cm of perimeter at breast height were marked, identified and had their diameters at breast height registered for two censes. Elasticities of the three vital rates for 89 tree species were obtained with an Integral Projection Model (IPM). IPMs are modern tools more robust than classical matrix models, commonly used in demographic studies. We defined an ecological space in the triangle where ecological strategies are plotted according to elasticities of the three vital rates. We also generated a molecular phylogeny based on rbcL and matK chloroplast markers, and used it to obtain the phylogenetic distance between all pairs of species. We calculated the phylogenetic signal of ecological strategies using the correlation between ecological distances in the ecological space and phylogenetic distances. We assumed ecological strategies to be conserved in the phylogeny. Species could be classified into four demographic groups in ecological space, distributed mainly in a growth-survival axis. This is expected for trees. No phylogenetic signal was found for the ecological strategies. This can mean that either both processes are structuring this community, or neither is important. Our study uses a new methodological approach and presents new results that contradict recent literature, on which environmental filtering is repeatedly accounted as the main process structuring tropical communities. Confirmation of this pattern for other communities may bring further understanding of structuring of tropical communities.

O presente estudo foi desenvolvido em trecho de Floresta Ombrófila Densa, localizada no Parque Estadual Carlos Botelho. SP., no sul do Estado de São Paulo, nas coordenadas geográficas 24o 00’ – 24o 15’ de latitude Sul, e 47o 55’ – 48o 05’ de longitude W, nos município de São Miguel Arcanjo, Sete Barras, Capão Bonito e Tapiraí, com o objetivo de comparar três métodos de amostragem (parcelas, quadrantes e relascopia) na determinação da composição florística, fitossociologia e diversidade de espécies do componente arbóreo. Com o emprego de imagens aéreas foram selecionadas duas áreas de amostragem, sendo a primeira, denominada Grade 1, localizada na parte mais alta do Parque no município de São Miguel Arcanjo - SP, e a segunda, denominada Grade 2, localizada a uma altitude de 650m., no município de Sete Barras - SP. A diferença de altitude entre as duas áreas é de 200m. aproximadamente. Na Grade 1, o método de parcelas amostrou 9543 indivíduos e 250 espécies, quadrantes 1276 indivíduos e 175 espécies e relascopia amostrou 638 indivíduos e 155 espécies. Na Grade 2, foram amostrados pelo método de parcelas 10124 indivíduos e 345 espécies, o método de quadrantes amostrou 1270 indivíduos e 207 espécies e a relascopia amostrou 578 indivíduos e 157 espécies. Foram registradas nas duas áreas de amostragem 65 famílias botânicas e 427 espécies arbóreas. As famílias Myrtaceae, Lauraceae, Fabaceae e Sapotaceae estavam presentes entre as dez famílias com maior riqueza de espécies, para os três métodos de amostragem empregados. A diversidade de espécies determinada pelo índice de Shannon registrou o maior índice para o método de parcela na Grade 2, H`= 4,702, sendo que o menor índice foi obtido pelo método de relascopia, H`= 4,411. Estes valores estão entre os maiores determinados até o presente para o componente arbóreo da vegetação do Parque Estadual Carlos Botelho, SP. Euterpe edulis e Ocotea catharinensis foram as espécies que mais se destacaram, por apresentarem os maiores valores de Índice de Valor de Importância (IVI), independente do método de amostragem. A Distância Euclidiana calculada para os parâmetros fitossociológicos Freqüência Relativa, Dominância Relativa, Densidade Relativa e Índice de Valor de Importância, mostra que os métodos de amostragem se comportaram de forma diferente na determinação desses parâmetros nas duas áreas de amostragem. / The following study was developed in tracks of the Dense Ombrophilous Forest, located in the Carlos Botelho State Park, SP., in the southern of the state of São Paulo, geographical coordinates of 24º00' – 24o 15’ South latitude and 47o 55’ - 48º05', West longitude, in the municipalities of São Miguel Arcanjo, Sete Barras, Capão Bonito and Tapiraí, with the objective of comparison of three sampling methods (parcels, point centred quarter and relascope) in determining the species composition, phytosociology and diversity of species in the arboreal component. In this vegetation, the sampling showed of 65 botanical families and 427 arboreas species. With the use of aerial images two areas were selected, the first one, designated Grid 1, being located in the highest part of the Park in the Sao Miguel Arcanjo municipality, and the second, designated Grid 2, located at a height of 650m., in the Sete Barras municipality. The height difference between these two areas is approximately 200m. In the Grid 1, the parcels method showed 9543 individuals and 250 species, the point center quarter method 1276 individuals and 175 species and the relascope method 638 species and 155 species. On Grid 2, we collected by the parcels method 10124 individuals and 345 species, the point center quarter method showed 1270 individuals and 207 species and the relascope method 578 individuals and 157 species. The families Myrtaceae, Lauraceae, Fabaceae and Sapotaceae presented the highest species richness in the three samples methods. The diversity of the species determined by the Shannon index recorded the highest index for the parcels method in Grid 2, H'=4.7202 and the smallest index was obtained by the relascope method H'=4.411, and these values are among the highest determined up to the present for the arboreal components of the vegetation for the Carlos Botelho State Park, SP. Euterpe edulis and Ocotea catharinensis were the outstanding species, by presenting the highest values in the Significant Value Index, independent of the sampling method. The Euclidian Distance calculated for the phytosociological parameters, Relative Frequency, Relative Dominance, Relative Density and Significant Value Index, shows that the samples methods behaves differently in characterizing the vegetation in Grid 1 and Grid 2.

O objetivo deste trabalho foi analisar o efeito de quatro intensidades de redução da área basal, representadas pela exploração e desbastes sistemáticos, na composição florística, diversidade, estrutura e dinâmica do extrato arbóreo, durante um período de 22 anos. O experimento se localiza na Floresta Nacional do Tapajós, município de Belterra, Pará, a altura do km 114 da Rodovia Santarém-Cuiabá. O delineamento estatístico utilizado foi Blocos ao Acaso com 4 repetições onde foram testados os seguintes tratamentos: T0: controle, representado pela floresta não explorada; T1: Abate de árvores comerciais com DAP ≥ 45cm, sem nenhuma intervenção posterior; T2: Abate de árvores comerciais DAP ≥ 55cm + desbaste de espécies não comerciais para reduzir a área basal em 20% da original; T3: Abate de árvores comerciais DAP ≥ 55cm + desbaste de espécies não comerciais para reduzir a área basal em 40% da original; T4: Abate de árvores comerciais DAP ≥ 55cm + desbaste de espécies não comerciais para reduzir a área basal em 60% da original. Cada bloco possui uma área de 36ha, sendo 9ha por tratamento. Em cada tratamento foram instaladas ao acaso 12 parcelas permanentes (PP) de 0,25ha, onde foram medidas todas árvores com diâmetro ≥ 5,0cm. A exploração de madeira foi realizada em 1982 e os desbastes foram iniciados em 1993 e concluídos em 1994, com a finalidade de reduzir a área basal do povoamento e, com isso, propiciar a maior penetração de luz, favorecendo o desenvolvimento e estabelecimento das espécies comerciais. As medições das PP na área explorada foram realizadas 1 ano antes da exploração (1981), e após a exploração nos anos de 1983, 1987, 1989, 1995 e 2003. Para a área testemunha foram realizadas 5 medições: 1983, 1987, 1989, 1995 e 2003. Os resultados mostraram que, 21 anos depois da exploração e nove após os desbastes, todos os tratamentos, exceto o testemunha, apresentaram aumento no número de espécies, o que indica o efeito positivo das intervenções. Cinco anos após a exploração, todos os tratamentos apresentaram número de árvores superior ao encontrado antes da intervenção, inclusive considerando somente as espécies de valor comercial. Porém, a área basal e o volume apresentaram recuperação mais lenta, ocorrendo de forma mais efetiva nas primeiras classes de diâmetro (5-45cm). Nas classes acima de 45cm, que foram as mais afetadas pela extração de madeira, a área basal, 21 anos após a exploração, ainda está, em média, 30% abaixo do valor original. As intervenções também alteraram a dinâmica da floresta, elevando as taxas de mortalidade, estimulando o aumento no número de ingressos e a aceleração nas taxas crescimento das árvores remanescentes. O tratamento T3 foi considerado o mais adequado porque induziu ao maior aumento na riqueza florística e favoreceu várias espécies de valor comercial madeireiro que aumentaram sua participação na abundância e área basal no povoamento. Esse tratamento também mostrou a maior taxa de recuperação da área basal comercial (aproximadamente 90%), e as maiores taxas de incremento em AB e volume, no período após a aplicação do desbaste. / The objective of this work was to analyze the effect of four intensities of basal area reduction, represented by systematic logging and liberation thinning, on the floristic composition, diversity, structure and dynamics of arboreal extract, over a period of 22 years. The experiment is located in the Tapajós National Forest, municipality of Belterra, Pará, at km 114 of the Santarém-Cuiabá Highway. The statistical delineation employed was Random Blocks with 4 repetitions, in which the following treatments were tested: T0: control, represented by unlogged forest; T1: Felling of commercial trees with DBH ≥ 45cm, with no posterior intervention; T2: Felling of commercial trees DBH ≥ 55cm + thinning of non-commercial species to reduce the original basal area by 20%; T3: Felling of commercial trees DBH ≥ 55cm + thinning of non-commercial species to reduce the original basal area by 40%; T4: Felling of commercial trees DBH ≥ 55cm + thinning of non-commercial species to reduce the original basal area by 60%. Each block measured 36ha, with 9ha for each treatment. In each treatment 12 0,25ha permanent parcels (PP) were randomly installed, in which all trees with diameter ≥ 5,0cm were measured. Logging was carried out in 1982 and the thinning treatments were begun in 1993 and concluded in 1994, with the purpose of reducing the basal area of the population and, so provide greater light penetration, favoring the development and establishment of commercial species The measurements of PP in the harvested area were carried out 1 year before logging (1981), and after logging in the years 1983, 1987, 1989, 1995 and 2003. For the unlogged area 5 measurements were done: 1983, 1987, 1989, 1995 and 2003. The results showed that, 21 years after logging nine after the thinnings, all of the treatments, except the witness, showed an increase in the number of species, which indicates the positive effect of the interventions. Five years after logging, all the treatments showed a greater number of trees than what was found before the intervention, including a count only of species with commercial value. However, the basal area and volume showed a lower recovery, occurring most effectively in the first diameter classes (5-45cm). In the classes above 45cm, which were the ones most affected by timber harvesting, the basal area, 21 years after logging, is still on average 30% below the original value. The interventions also alter forest dynamics, increasing mortality rates, stimulating an increase in the number of ingresses and acceleration in growth of remaining trees. Treatment T3 was considered the most adequate one, because it induced a greater increase in floristic diversity and favored several species with commercially valuable timber, which increased their participation in terms of abundance and basal area in the population. This treatment also showed the highest recovery rate for the commercial basal area (approximately 90%), and the greatest increments in AB and volume, in the period after application of the thinnings.